Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001578

Physical Location & Seq

Genomic Coordinates Forward (+)

10881479 .. 10886472

Gene Structure 4994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G30680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGCGATTTTTGCTTCGTTTACCACAAATTCATTTTCGGAAACTCTCGTGCTCGATGTCTGTACTCATGGGTTCGAAGCAATTCCTCGAATTTTGTCTTCTTCCTTCTTTTGCCTCATACCCTTCTTCTCCTTCTTATTCTTCAAGTAGACAAGTATCTTCCGTTTCTAGAAGATTTCGACCAGTTTTGGCCTCGAGACCTGTGTCCAAAAACAGTCCTTATTACCAAAGGACCAATGGTTTATCATCTTACAATTCAATCCCCAGAGTCCCAACTCCTGTTGATACTGAAGTAGAAGCAGATAAGAGGGTTGTTCTATCTAGATTAGTGACTTTGAGGCGTAAATTGGCGGAACAGGGAGTTGATGCTGAAAACTGCCCCCCAGGACAACATAGTGGCTTGATATGTCCGACGTGTGAAGGTGGAAACTCTGGAGAAAAAAGCTTGTCTCTTTTTATAGCCCCTGATGGTTCATCAGCTACATGGAATTGCTTTAGGGGGAAGTGTGGGTTAAAAGGTGGAGTTCGGGCGGATGGTGGGTTGGCATCTGCTGATCCTATAGAGAAGGTTGAAAGAAAAATTACGGTGGAGGGTATAGAGCTAGAACCTCTCTGTGATGAGATTCAAGATTATTTCGCTGCAAGAGCGATTTCACGGAAAACACTCGAGAGAAATCGGGTTATGCAGAAAAGAATAGGTGACGAGATTGTAATTGCGTTTACTTATTGGCAAAGAGGGGAGCTTGTGAGTTGCAAGTACCGGTCTCTAACTAAGATGTTCTTTCAGGAAAGGAAGACACGGAGGATCTTATATGGTCTTGATGACATAGAAAAAACATCTGAAGTCATTATAGTTGAAGGGGAGATAGATAAACTTGCAATGGAAGAAGCTGGTTTTCTCAATTGTGTATCCGTTCCTGATGGAGCTCCAGCGAAGGTTTCTTCGAAGGAAATCCCATCGGAAGACAAGGACACGAAGTATAAATTTCTATGGAATTGCAATGACTATCTAAAAAAGGCGTCTCGAATTGTTATTGCTACTGACGGAGATGGACCTGGTCAAGCTATGGCGGAAGAAATTGCACGGCGTTTGGGTAAAGAAAGATGTTGGCGTGTCAAGTGGCCGAAGAAAAGTGAGGATGAACATTTTAAAGATGCAAACGAGGTTCTTATGTCTAAGGGACCTCATTTACTCAAGGAAGCTATTTTAGATGCTGAGCCATATCCTATACTAGGATTATTCTCCTTCAAAGATTTCTTTGATGAAATTGATGCCTACTATGATAGAACACATGGGCACGAGTATGGTGTTTCAACAGGGTGGAAAAATTTGGACAACTTGTATAGTGTTGTGCCAGGGGAGTTGACAGTTGTGACAGGGATCCCTAATTCTGGAAAGAGTGAATGGATTGATGCTATGTTGTGCAATCTTAACCATAGTGTTGGCTGGAAATTTGCACTCTGTTCAATGGAGAATAAGGTACGAGATCATGCCAGGAAACTTTTGGAAAAACATATAAAGAAACCATTCTTTGATGCAGACTATGGGAGATCTGTCCAACGGATGAGCGTTGAGGAGAAGGATGAAGGGAAAAAGTGGTTGAATGACACCTTCTATCCCATAAGATGTGAGATGGATTCACTTCCAAGTATTGATTGGGTTCTGGAACGTGCAAAAGCAGCTGTTCTTCGGTATGGGATTCGAGGACTTGTTATAGATCCTTACAATGAGCTCGATCATCAACGTACTCCACGCCAGACGGAGACAGAGTATGTCAGCCAGATGCTTACAAAAATCAAACGCTTTTCCCAACACCACTCCTGCCATGTCTGGTTTGTCGCTCATCCAAAACAGTTGCAACATTGGGATGGCGGTGCACCAAACCTTTACGATATTAGTGGCAGCGCACATTTTATAAACAAATGTGACAATGGTATTATAGTTCACAGAAACCGCGACGAAAATGCTGGACCTCTTGATCTAGTTCAAATTGGTGTGAGGAAAGTACGAAACAAGGTGGCAGGACAAATTGGTGATGCATACTTGTGTTATGACAGGACAACTGGTTCCTACTCGGATTCTCCAGTGACGCCTGGAATGCCAGAGAGGAGATCACCCAAGCGGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003697 GO:0003824 GO:0003896 GO:0003899 GO:0004003 GO:0004386 GO:0005488 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009259 GO:0009260 GO:0009987 GO:0016043 GO:0016070 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032392 GO:0032508 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0042623 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044281 GO:0046390 GO:0046483 GO:0051276 GO:0055086 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0090407 GO:0097159 GO:0097747 GO:0140097 GO:0140098 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_25 DnaB_C Toprim_4

Protein Analysis

709

Amino Acids

80.4

Weight (kDa)

8.66

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Toprim_4	PF13662	280 - 368	6.1e-13	Toprim domain
Toprim	PF01751	281 - 362	4.9e-07	Toprim domain
Toprim_2	PF13155	283 - 390	6.7e-06	Toprim-like
DnaB_C	PF03796	436 - 691	4.5e-08	DnaB-like helicase C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001578)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30660 AT1G30660 AT1G30660 AT1G30680
fragaria_vesca	FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11220 FvH4_3g11220
malus_domestica	MD05G1265600.v1.1 MD10G1243800.v1.1
prunus_persica	Prupe.4G099700_v2.0.a1 Prupe.4G099700_v2.0.a1 Prupe.4G099700_v2.0.a1 Prupe.4G099700_v2.0.a1 Prupe.4G099900_v2.0.a1 Prupe.4G099900_v2.0.a1
pyrus_communis	pycom05g24970 pycom10g20390
rosa_chinensis	RchiOBHm_Chr5g0018141 RchiOBHm_Chr5g0018171
rosa_laevigata	RLG00000032341 RLG00000032343
rosa_multiflora	Rmu_sc0006594.1_g000001 Rmu_sc0013020.1_g000001 Rmu_sc0013020.1_g000004
rosa_roxburghii	Rroxscaffold_1G00059480 Rroxscaffold_1G00059500
rosa_rugosa	Rorug05G0040700 Rorug05G0040900
rosa_samantha	Rh5AG133500 Rh5AG133800 Rh5BG131900 Rh5BG132300 Rh5CG144200 Rh5CG144500 Rh5DG133900 Rh5DG134200
rosa_wichuraiana	Rw5G011640 Rw5G011690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1916
AccI	GTMKAC	1 cut(s)	148
AccII	CGCG	1 cut(s)	1956
AciI	CCGC	6 cut(s)	350, 530, 1070, 1872, 1954, 2122
AclWI	GGATC	5 cut(s)	548, 812, 1375, 1388, 1712
AcoI	YGGCCR	1 cut(s)	1121
AcsI	RAATTY	5 cut(s)	27, 89, 983, 1327, 1451
AcuI	CTGAAG	2 cut(s)	309, 861
AcyI	GRCGYC	2 cut(s)	1019, 2090
AfaI	GTAC	6 cut(s)	63, 758, 1482, 1747, 2007, 2126
AfiI	CCNNNNNNNGG	2 cut(s)	1232, 1391
AflIII	ACRYGT	1 cut(s)	413
AgeI	ACCGGT	1 cut(s)	759
AjiI	CACGTC	1 cut(s)	414
AjnI	CCWGG	5 cut(s)	382, 1054, 1354, 1493, 2092
AloI	GAACNNNNNNTCC	2 cut(s)	2050, 2082
Alw21I	GWGCWC	4 cut(s)	53, 928, 1734, 1879
Alw26I	GTCTC	5 cut(s)	190, 453, 768, 1026, 1757
Alw44I	GTGCAC	1 cut(s)	1875
AlwI	GGATC	5 cut(s)	548, 812, 1375, 1388, 1712
Ama87I	CYCGRG	2 cut(s)	193, 665
AoxI	GGCC	2 cut(s)	189, 1121
ApaLI	GTGCAC	1 cut(s)	1875
ApeKI	GCWGC	3 cut(s)	638, 1679, 1902
ApoI	RAATTY	5 cut(s)	27, 89, 983, 1327, 1451
AsiGI	ACCGGT	1 cut(s)	759
Asp700I	GAANNNNTTC	2 cut(s)	80, 1526
AspLEI	GCGC	1 cut(s)	1907
AspS9I	GGNCC	4 cut(s)	231, 1052, 1181, 1970
AsuHPI	GGTGA	3 cut(s)	710, 2045, 2106
AsuII	TTCGAA	2 cut(s)	74, 944
AvaI	CYCGRG	2 cut(s)	193, 665
AvaII	GGWCC	4 cut(s)	231, 1052, 1181, 1970
BaeGI	GKGCMC	2 cut(s)	1299, 1879
BaeI	ACNNNNGTAYC	2 cut(s)	276, 309
BamHI	GGATCC	1 cut(s)	1380
BanII	GRGCYC	2 cut(s)	928, 1734
BauI	CACGAG	2 cut(s)	46, 1298
BbsI	GAAGAC	3 cut(s)	89, 800, 969
Bbv12I	GWGCWC	4 cut(s)	53, 928, 1734, 1879
BbvI	GCAGC	3 cut(s)	625, 1691, 1914
BccI	CCATC	7 cut(s)	461, 527, 914, 964, 1043, 1627, 1862
BceAI	ACGGC	1 cut(s)	1100
BcgI	CGANNNNNNTGC	2 cut(s)	1946, 1980
BciT130I	CCWGG	5 cut(s)	384, 1056, 1356, 1495, 2094
BciVI	GTATCC	1 cut(s)	919
BcoDI	GTCTC	5 cut(s)	190, 453, 768, 1026, 1757
BfaI	CTAG	5 cut(s)	168, 321, 602, 1232, 1982
BfmI	CTRYAG	1 cut(s)	558
BfuI	GTATCC	1 cut(s)	919
BglII	AGATCT	1 cut(s)	1550
BisI	GCNGC	3 cut(s)	639, 1680, 1903
BlpI	GCTNAGC	1 cut(s)	1215
BlsI	GCNGC	3 cut(s)	640, 1681, 1904
Bme1390I	CCNGG	5 cut(s)	384, 1056, 1356, 1495, 2094
Bme18I	GGWCC	4 cut(s)	231, 1052, 1181, 1970
BmeT110I	CYCGRG	2 cut(s)	193, 665
BmgBI	CACGTC	1 cut(s)	414
BmgT120I	GGNCC	4 cut(s)	231, 1052, 1181, 1970
BmiI	GGNNCC	3 cut(s)	1182, 1382, 2068
BmrFI	CCNGG	5 cut(s)	384, 1056, 1356, 1495, 2094
BmsI	GCATC	9 cut(s)	355, 554, 1144, 1201, 1261, 1402, 1525, 1773, 2026
BoxI	GACNNNNGTC	1 cut(s)	202
BpiI	GAAGAC	3 cut(s)	89, 800, 969
BpmI	CTGGAG	3 cut(s)	453, 912, 2067
Bpu1102I	GCTNAGC	1 cut(s)	1215
Bpu14I	TTCGAA	2 cut(s)	74, 944
BpuEI	CTTGAG	1 cut(s)	1178
BsaHI	GRCGYC	2 cut(s)	1019, 2090
BsaI	GGTCTC	2 cut(s)	190, 768
BsaJI	CCNNGG	2 cut(s)	382, 1355
BsaWI	WCCGGW	1 cut(s)	759
BsaXI	ACNNNNNCTCC	2 cut(s)	1754, 1784
Bsc4I	CCNNNNNNNGG	2 cut(s)	1232, 1391
Bse118I	RCCGGY	1 cut(s)	759
Bse1I	ACTGG	3 cut(s)	182, 2068, 2084
Bse3DI	GCAATG	2 cut(s)	885, 1006
BseBI	CCWGG	5 cut(s)	384, 1056, 1356, 1495, 2094
BseDI	CCNNGG	2 cut(s)	382, 1355
BseGI	GGATG	6 cut(s)	538, 1144, 1569, 1588, 1843, 1873
BseLI	CCNNNNNNNGG	2 cut(s)	1232, 1391
BseMI	GCAATG	2 cut(s)	885, 1006
BseMII	CTCAG	1 cut(s)	1206
BseNI	ACTGG	3 cut(s)	182, 2068, 2084
BseRI	GAGGAG	2 cut(s)	1589, 2122
BseSI	GKGCMC	2 cut(s)	1299, 1879
BseXI	GCAGC	3 cut(s)	625, 1691, 1914
Bsh1236I	CGCG	1 cut(s)	1956
BshFI	GGCC	2 cut(s)	191, 1123
BshTI	ACCGGT	1 cut(s)	759
BsiHKAI	GWGCWC	4 cut(s)	53, 928, 1734, 1879
BsiHKCI	CYCGRG	2 cut(s)	193, 665
BsiSI	CCGG	1 cut(s)	760
BslFI	GGGAC	2 cut(s)	254, 1194
BslI	CCNNNNNNNGG	2 cut(s)	1232, 1391
BsmAI	GTCTC	5 cut(s)	190, 453, 768, 1026, 1757
BsmBI	CGTCTC	1 cut(s)	1026
BsmFI	GGGAC	2 cut(s)	254, 1194
BsmI	GAATGC	1 cut(s)	2103
BsnI	GGCC	2 cut(s)	191, 1123
Bso31I	GGTCTC	2 cut(s)	190, 768
BsoBI	CYCGRG	2 cut(s)	193, 665
Bsp119I	TTCGAA	2 cut(s)	74, 944
Bsp1286I	GDGCHC	5 cut(s)	53, 928, 1299, 1734, 1879
Bsp143I	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
Bsp1720I	GCTNAGC	1 cut(s)	1215
BspACI	CCGC	6 cut(s)	350, 530, 1070, 1872, 1954, 2122
BspANI	GGCC	2 cut(s)	191, 1123
BspCNI	CTCAG	1 cut(s)	1207
BspFNI	CGCG	1 cut(s)	1956
BspLI	GGNNCC	3 cut(s)	1182, 1382, 2068
BspPI	GGATC	5 cut(s)	548, 812, 1375, 1388, 1712
BspT104I	TTCGAA	2 cut(s)	74, 944
BspTNI	GGTCTC	2 cut(s)	190, 768
BsrDI	GCAATG	2 cut(s)	885, 1006
BsrFI	RCCGGY	1 cut(s)	759
BsrI	ACTGG	3 cut(s)	182, 2068, 2084
BssAI	RCCGGY	1 cut(s)	759
BssECI	CCNNGG	2 cut(s)	382, 1355
BssMI	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
BssNI	GRCGYC	2 cut(s)	1019, 2090
BssSI	CACGAG	2 cut(s)	46, 1298
Bst2BI	CACGAG	2 cut(s)	46, 1298
Bst2UI	CCWGG	5 cut(s)	384, 1056, 1356, 1495, 2094
Bst4CI	ACNGT	4 cut(s)	215, 586, 1369, 1854
BstACI	GRCGYC	2 cut(s)	1019, 2090
BstBI	TTCGAA	2 cut(s)	74, 944
BstDEI	CTNAG	3 cut(s)	771, 1176, 1215
BstENI	CCTNNNNNAGG	1 cut(s)	1230
BstF5I	GGATG	6 cut(s)	538, 1144, 1569, 1588, 1843, 1873
BstFNI	CGCG	1 cut(s)	1956
BstHHI	GCGC	1 cut(s)	1907
BstKTI	GATC	9 cut(s)	556, 807, 1383, 1489, 1553, 1720, 1738, 1981, 2114
BstMAI	GTCTC	5 cut(s)	190, 453, 768, 1026, 1757
BstMBI	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
BstMWI	GCNNNNNNNGC	4 cut(s)	10, 644, 1679, 2098
BstNI	CCWGG	5 cut(s)	384, 1056, 1356, 1495, 2094
BstPAI	GACNNNNGTC	1 cut(s)	202
BstSCI	CCNGG	5 cut(s)	382, 1054, 1354, 1493, 2092
BstSFI	CTRYAG	1 cut(s)	558
BstSLI	GKGCMC	2 cut(s)	1299, 1879
BstUI	CGCG	1 cut(s)	1956
BstV1I	GCAGC	3 cut(s)	625, 1691, 1914
BstV2I	GAAGAC	3 cut(s)	89, 800, 969
BstX2I	RGATCY	4 cut(s)	804, 1380, 1550, 1717
BstXI	CCANNNNNNTGG	1 cut(s)	1442
BstYI	RGATCY	4 cut(s)	804, 1380, 1550, 1717
BsuI	GTATCC	1 cut(s)	919
BsuRI	GGCC	2 cut(s)	191, 1123
BtrI	CACGTC	1 cut(s)	414
BtsCI	GGATG	6 cut(s)	538, 1144, 1569, 1588, 1843, 1873
BtsIMutI	CAGTG	1 cut(s)	2091
CfoI	GCGC	1 cut(s)	1907
Cfr10I	RCCGGY	1 cut(s)	759
Cfr13I	GGNCC	4 cut(s)	231, 1052, 1181, 1970
CseI	GACGC	2 cut(s)	1008, 2098
CsiI	ACCWGGT	1 cut(s)	1054
Csp6I	GTAC	6 cut(s)	62, 757, 1481, 1746, 2006, 2125
CspAI	ACCGGT	1 cut(s)	759
CviAII	CATG	5 cut(s)	67, 483, 1292, 1490, 1826
CviQI	GTAC	6 cut(s)	62, 757, 1481, 1746, 2006, 2125
DdeI	CTNAG	3 cut(s)	771, 1176, 1215
DpnI	GATC	9 cut(s)	555, 806, 1382, 1488, 1552, 1719, 1737, 1980, 2113
DpnII	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
DraI	TTTAAA	1 cut(s)	1150
EaeI	YGGCCR	1 cut(s)	1121
EciI	GGCGGA	3 cut(s)	365, 545, 1085
Ecl136II	GAGCTC	2 cut(s)	926, 1732
Eco24I	GRGCYC	2 cut(s)	928, 1734
Eco31I	GGTCTC	2 cut(s)	190, 768
Eco47I	GGWCC	4 cut(s)	231, 1052, 1181, 1970
Eco53kI	GAGCTC	2 cut(s)	926, 1732
Eco57I	CTGAAG	2 cut(s)	309, 861
Eco88I	CYCGRG	2 cut(s)	193, 665
EcoICRI	GAGCTC	2 cut(s)	926, 1732
EcoNI	CCTNNNNNAGG	1 cut(s)	1230
EcoO109I	RGGNCCY	1 cut(s)	1181
EcoRII	CCWGG	5 cut(s)	382, 1054, 1354, 1493, 2092
EcoT22I	ATGCAT	1 cut(s)	2041
EcoT38I	GRGCYC	2 cut(s)	928, 1734
Esp3I	CGTCTC	1 cut(s)	1026
FaeI	CATG	5 cut(s)	70, 486, 1295, 1493, 1829
FalI	AAGNNNNNCTT	2 cut(s)	764, 796
FaqI	GGGAC	2 cut(s)	254, 1194
FatI	CATG	5 cut(s)	66, 482, 1291, 1489, 1825
FblI	GTMKAC	1 cut(s)	148
Fnu4HI	GCNGC	3 cut(s)	639, 1680, 1903
FokI	GGATG	6 cut(s)	545, 1151, 1576, 1595, 1830, 1880
FriOI	GRGCYC	2 cut(s)	928, 1734
Fsp4HI	GCNGC	3 cut(s)	639, 1680, 1903
FspBI	CTAG	5 cut(s)	168, 321, 602, 1232, 1982
GlaI	GCGC	1 cut(s)	1906
GluI	GCNGC	3 cut(s)	639, 1680, 1903
GsuI	CTGGAG	3 cut(s)	453, 912, 2067
HaeIII	GGCC	2 cut(s)	191, 1123
HapII	CCGG	1 cut(s)	760
HgaI	GACGC	2 cut(s)	1008, 2098
HhaI	GCGC	1 cut(s)	1907
Hin1I	GRCGYC	2 cut(s)	1019, 2090
Hin1II	CATG	5 cut(s)	70, 486, 1295, 1493, 1829
Hin6I	GCGC	1 cut(s)	1905
HinP1I	GCGC	1 cut(s)	1905
HincII	GTYRAC	1 cut(s)	1365
HindII	GTYRAC	1 cut(s)	1365
HindIII	AAGCTT	1 cut(s)	442
HinfI	GANTC	5 cut(s)	267, 622, 1637, 1699, 2078
HpaII	CCGG	1 cut(s)	760
HphI	GGTGA	3 cut(s)	710, 2045, 2106
Hpy166II	GTNNAC	6 cut(s)	20, 149, 720, 1365, 1877, 1945
Hpy188I	TCNGA	5 cut(s)	39, 411, 841, 961, 2077
Hpy8I	GTNNAC	6 cut(s)	20, 149, 720, 1365, 1877, 1945
Hpy99I	CGWCG	2 cut(s)	415, 1961
HpyCH4III	ACNGT	4 cut(s)	215, 586, 1369, 1854
HpyCH4IV	ACGT	3 cut(s)	413, 1669, 1744
HpyF10VI	GCNNNNNNNGC	4 cut(s)	10, 644, 1679, 2098
HpyF3I	CTNAG	3 cut(s)	771, 1176, 1215
HpySE526I	ACGT	3 cut(s)	413, 1669, 1744
Hsp92I	GRCGYC	2 cut(s)	1019, 2090
Hsp92II	CATG	5 cut(s)	70, 486, 1295, 1493, 1829
HspAI	GCGC	1 cut(s)	1905
Kzo9I	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
LmnI	GCTCC	3 cut(s)	739, 923, 931
Lsp1109I	GCAGC	3 cut(s)	625, 1691, 1914
LweI	GCATC	9 cut(s)	355, 554, 1144, 1201, 1261, 1402, 1525, 1773, 2026
MabI	ACCWGGT	1 cut(s)	1054
MaeI	CTAG	5 cut(s)	168, 321, 602, 1232, 1982
MaeII	ACGT	3 cut(s)	413, 1669, 1744
MaeIII	GTNAC	5 cut(s)	328, 698, 1372, 1925, 2086
MalI	GATC	9 cut(s)	555, 806, 1382, 1488, 1552, 1719, 1737, 1980, 2113
MboI	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
MfeI	CAATTG	1 cut(s)	901
MflI	RGATCY	4 cut(s)	804, 1380, 1550, 1717
MhlI	GDGCHC	5 cut(s)	53, 928, 1299, 1734, 1879
MlyI	GAGTC	1 cut(s)	276
MmeI	TCCRAC	2 cut(s)	434, 1582
Mph1103I	ATGCAT	1 cut(s)	2041
MroXI	GAANNNNTTC	2 cut(s)	80, 1526
MseI	TTAA	3 cut(s)	512, 1149, 1431
MslI	CAYNNNNRTG	3 cut(s)	1302, 1866, 2044
MspA1I	CMGCKG	1 cut(s)	1682
MspI	CCGG	1 cut(s)	760
MspR9I	CCNGG	5 cut(s)	384, 1056, 1356, 1495, 2094
MunI	CAATTG	1 cut(s)	901
Mva1269I	GAATGC	1 cut(s)	2103
MvaI	CCWGG	5 cut(s)	384, 1056, 1356, 1495, 2094
MvnI	CGCG	1 cut(s)	1956
MwoI	GCNNNNNNNGC	4 cut(s)	10, 644, 1679, 2098
NdeII	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
NlaIII	CATG	5 cut(s)	70, 486, 1295, 1493, 1829
NlaIV	GGNNCC	3 cut(s)	1182, 1382, 2068
NmuCI	GTSAC	5 cut(s)	328, 698, 1372, 1925, 2086
NsiI	ATGCAT	1 cut(s)	2041
NspV	TTCGAA	2 cut(s)	74, 944
PaeR7I	CTCGAG	2 cut(s)	193, 665
PctI	GAATGC	1 cut(s)	2103
PdmI	GAANNNNTTC	2 cut(s)	80, 1526
PfeI	GAWTC	4 cut(s)	622, 1637, 1699, 2078
PflFI	GACNNNGTC	1 cut(s)	1056
PinAI	ACCGGT	1 cut(s)	759
PkrI	GCNGC	3 cut(s)	640, 1681, 1904
PleI	GAGTC	1 cut(s)	275
PpsI	GAGTC	1 cut(s)	275
PpuMI	RGGWCCY	1 cut(s)	1181
PshAI	GACNNNNGTC	1 cut(s)	202
PsiI	TTATAA	1 cut(s)	1916
Psp124BI	GAGCTC	2 cut(s)	928, 1734
Psp5II	RGGWCCY	1 cut(s)	1181
Psp6I	CCWGG	5 cut(s)	382, 1054, 1354, 1493, 2092
PspGI	CCWGG	5 cut(s)	382, 1054, 1354, 1493, 2092
PspN4I	GGNNCC	3 cut(s)	1182, 1382, 2068
PspPI	GGNCC	4 cut(s)	231, 1052, 1181, 1970
PspPPI	RGGWCCY	1 cut(s)	1181
PsuI	RGATCY	4 cut(s)	804, 1380, 1550, 1717
PsyI	GACNNNGTC	1 cut(s)	1056
PvuII	CAGCTG	1 cut(s)	1682
RsaI	GTAC	6 cut(s)	63, 758, 1482, 1747, 2007, 2126
RsaNI	GTAC	6 cut(s)	62, 757, 1481, 1746, 2006, 2125
RseI	CAYNNNNRTG	3 cut(s)	1302, 1866, 2044
SacI	GAGCTC	2 cut(s)	928, 1734
SaqAI	TTAA	3 cut(s)	512, 1149, 1431
SatI	GCNGC	3 cut(s)	639, 1680, 1903
Sau3AI	GATC	9 cut(s)	553, 804, 1380, 1486, 1550, 1717, 1735, 1978, 2111
Sau96I	GGNCC	4 cut(s)	231, 1052, 1181, 1970
SchI	GAGTC	1 cut(s)	276
ScrFI	CCNGG	5 cut(s)	384, 1056, 1356, 1495, 2094
SduI	GDGCHC	5 cut(s)	53, 928, 1299, 1734, 1879
SexAI	ACCWGGT	1 cut(s)	1054
SfaNI	GCATC	9 cut(s)	355, 554, 1144, 1201, 1261, 1402, 1525, 1773, 2026
SfcI	CTRYAG	1 cut(s)	558
Sfr274I	CTCGAG	2 cut(s)	193, 665
SfuI	TTCGAA	2 cut(s)	74, 944
SinI	GGWCC	4 cut(s)	231, 1052, 1181, 1970
SlaI	CTCGAG	2 cut(s)	193, 665
SmiMI	CAYNNNNRTG	3 cut(s)	1302, 1866, 2044
SmlI	CTYRAG	3 cut(s)	193, 665, 1193
SmoI	CTYRAG	3 cut(s)	193, 665, 1193
SsiI	CCGC	6 cut(s)	350, 530, 1070, 1872, 1954, 2122
SspMI	CTAG	5 cut(s)	168, 321, 602, 1232, 1982
SstI	GAGCTC	2 cut(s)	928, 1734
StyD4I	CCNGG	5 cut(s)	382, 1054, 1354, 1493, 2092
TaaI	ACNGT	4 cut(s)	215, 586, 1369, 1854
TaiI	ACGT	3 cut(s)	416, 1672, 1747
TatI	WGTACW	1 cut(s)	61
TfiI	GAWTC	4 cut(s)	622, 1637, 1699, 2078
Tru1I	TTAA	3 cut(s)	512, 1149, 1431
Tru9I	TTAA	3 cut(s)	512, 1149, 1431
TscAI	CASTG	1 cut(s)	2091
TseFI	GTSAC	5 cut(s)	328, 698, 1372, 1925, 2086
TseI	GCWGC	3 cut(s)	638, 1679, 1902
Tsp45I	GTSAC	5 cut(s)	328, 698, 1372, 1925, 2086
TspDTI	ATGAA	5 cut(s)	20, 462, 1155, 1278, 1599
TspGWI	ACGGA	7 cut(s)	151, 670, 814, 901, 1059, 1576, 1775
TspRI	CASTG	1 cut(s)	2091
Tth111I	GACNNNGTC	1 cut(s)	1056
VneI	GTGCAC	1 cut(s)	1875
VpaK11BI	GGWCC	4 cut(s)	231, 1052, 1181, 1970
XagI	CCTNNNNNAGG	1 cut(s)	1230
XapI	RAATTY	5 cut(s)	27, 89, 983, 1327, 1451
XbaI	TCTAGA	2 cut(s)	167, 320
XcmI	CCANNNNNNNNNTGG	3 cut(s)	233, 1501, 1653
XhoI	CTCGAG	2 cut(s)	193, 665
XmiI	GTMKAC	1 cut(s)	148
XmnI	GAANNNNTTC	2 cut(s)	80, 1526
XspI	CTAG	5 cut(s)	168, 321, 602, 1232, 1982
Zsp2I	ATGCAT	1 cut(s)	2041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.