Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0001578

Physical Location & Seq

Genomic Coordinates Reverse (-)

5079654 .. 5090902

Gene Structure 11249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G099700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGCGTCTTCTTCTTCTTCGACCTCTTCGTAAGCTCTCCTTTTTATCCTCAAGCGCTGGTCTTCTAATGGGCACCGTGCAACTCTTCAAGTCCACTCCTTGTCCAAACCCATTAACTCCTTCTTCACAAAGACACTCATTTCACTCCCATAGACTCGTTTTCTCTCCACTCTCGCCAAAACCCATGTCTAAAACTCGGCCACTTTGCCTTAGAACTAATGGGTATTCTTATGTCTCACATGCCAATGGCGCCGCACCAGCTGAATTAGAAAACGCAGAAGAAAAGAGAGTGGACTTTAACCAATTGTCGCGTTTGAAGCTGAAATTGGAGATGCTTGGCATAGACTACGGAATATGTATGCCAGGGCAGTACAACCACTTGATTTGTCCAATATGCAAAGGTGGCGATTCAGAGGAAAAGAGCTTATCGGTTTATATTTCAGAAGATTGGGGTTCTGCTTTTTGGTGTTGCTTTCGTGGGAAATGTGGGTGGCAAGGTAGAACAACGGCCGTTGGAGATAACAAGTTGTCACGAGAAACTTCAAATCAAATTGCCAAAGTGAAGAAAAGAAGGGAAATCACGGTGGAAAGTCTAGGACTGGAACCACTTTGTGAGGAGCTTGTTGCCTATTTTTCGGAGCGAAGTATATCAACGGAAACATTGAGAAGAAATGCTGTAATGCAAAAAACTACAGGTGTTCAGATTTGTATTGCATTTCCTTATTGGAGAGACGGACAGCTTGTTAGTTGCAAGTATCGGGACATCGAAAAGAAGTTCTGGCAGGAAAAGGATACCGAAAAGATTTTTTATGGGCTGGATGATATAAAGGGAACTAATGATATCATCATTGTTGAAGGCGAAATTGATAAGCTTGCAATGGAAGAAGCTGGCTTTCATAATTGCGTGAGTGTGCCTGATGGTGCTCCTCCAAAGGTTTCCTCAAAGGATTTGCCGCCTGAAGAGCAGGATACAAAGTATCAATATCTGTGGAACTGCAAAGAGTACTTAAAGAAGGCATCACGAATTATACTTGCCACTGACGGAGATGATCCTGGTCAAGCCCTAGCTGAAGAGCTTGCACGTCGCCTTGGAAGAGAAAGATGCTGGCGAGTCAGATGGCCAATGAAAAATGATAATGAGCACTTCAAAGATGCAAATGAGGTTCTTATGTACTTGGGTCCCGATGTTTTGAAGGAAGTAATTGAGAATGCTGAATTATATCCTATACGTGGATTGTTCAACTTTGCAAATTACTTTGATGAACTTGATGCATATTATTATCGGACTCTTGGATATGAGTATGGTGTCTCAACTGGGTGGAAAGGTCTGAATGAGTTGTACAATATTGTTCCAGGTGAGTTGACTATAGTAACAGGTGTCCCTAATTCAGGCAAGAGTGAGTGGATTGATGCTCTGTTGTGCAATCTCAGTGAAAGTGTTGGGTGGAAATTTGCACTTTGCTCTATGGAGAACAAGGTTCGGGAGCATGCGAGAAAATTGCTGGAGAAACACATAAAGAAGCCTTTCTTTGATAAACGTTATGGTGGTTCTGCTGAACGAATGAGTGCCGAAGAATTTGAGCAAGGGAAACAATGGCTAAATGACACCTTTTACCTCATAAGGTGTGAGGATGATTCCCTTCCAAGTATCTCTTGGGTTCTTGAGCTCGCACAAGCAGCAGTACTTAGGCATGGGGTGCGTGGACTTGTAATTGATCCTTACAATGAGCTTGATCATCAACGTCCCCCGAATCAGACAGAAACAGAGTACGTAAGTCAGATGCTTACCAAGGTCAAACGGTTTGCTCAGCATCATTGTTGCCATGTTTGGTTTGTGGCACATCCGAGACAGTTGCACCAGTGGGTCGGGGGTCCCCCTAATCTCTATGATATAAGTGGAAGTGCACACTTCATAAATAAATGTGACAATGGAATTGTAATTCATCGTAATCGGGATCCAGGGGCTGGTGACTTGGATCAAGTACAAGTTTGTGTTCGGAAGGTACGGAATAAAGTTGCAGGAACGATAGGTGACGCCTATTTGACATACGATAGGGCAACTGGTCAATTTAAGGATATTGGTATTAAAAAGAGCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003697 GO:0003824 GO:0003896 GO:0003899 GO:0004003 GO:0004386 GO:0005488 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009259 GO:0009260 GO:0009987 GO:0016043 GO:0016070 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032392 GO:0032508 GO:0032774 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0042623 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044281 GO:0046390 GO:0046483 GO:0051276 GO:0055086 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0090407 GO:0097159 GO:0097747 GO:0140097 GO:0140098 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaB_C Toprim_4

Protein Analysis

700

Amino Acids

79.68

Weight (kDa)

7.74

Isoelectric Point (pI)

36.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001578)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30660 AT1G30660 AT1G30660 AT1G30680
fragaria_vesca	FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11200 FvH4_3g11220 FvH4_3g11220
malus_domestica	MD05G1265600.v1.1 MD10G1243800.v1.1
prunus_persica	Prupe.4G099700_v2.0.a1 Prupe.4G099700_v2.0.a1 Prupe.4G099700_v2.0.a1 Prupe.4G099700_v2.0.a1 Prupe.4G099900_v2.0.a1 Prupe.4G099900_v2.0.a1
pyrus_communis	pycom05g24970 pycom10g20390
rosa_chinensis	RchiOBHm_Chr5g0018141 RchiOBHm_Chr5g0018171
rosa_laevigata	RLG00000032341 RLG00000032343
rosa_multiflora	Rmu_sc0006594.1_g000001 Rmu_sc0013020.1_g000001 Rmu_sc0013020.1_g000004
rosa_roxburghii	Rroxscaffold_1G00059480 Rroxscaffold_1G00059500
rosa_rugosa	Rorug05G0040700 Rorug05G0040900
rosa_samantha	Rh5AG133500 Rh5AG133800 Rh5BG131900 Rh5BG132300 Rh5CG144200 Rh5CG144500 Rh5DG133900 Rh5DG134200
rosa_wichuraiana	Rw5G011640 Rw5G011690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	71, 248
AccB7I	CCANNNNNTGG	1 cut(s)	1964
AccII	CGCG	1 cut(s)	310
AciI	CCGC	2 cut(s)	252, 953
AclI	AACGTT	1 cut(s)	1537
AclWI	GGATC	5 cut(s)	1043, 1709, 1949, 1962, 1983
AcoI	YGGCCR	3 cut(s)	197, 507, 1118
AcsI	RAATTY	2 cut(s)	1448, 1574
AcuI	CTGAAG	2 cut(s)	978, 1089
AcyI	GRCGYC	2 cut(s)	249, 2034
AdeI	CACNNNGTG	1 cut(s)	611
AfaI	GTAC	8 cut(s)	371, 1004, 1172, 1340, 1683, 1769, 1983, 2004
AfeI	AGCGCT	1 cut(s)	55
AfiI	CCNNNNNNNGG	3 cut(s)	1229, 1388, 1964
AgsI	TTSAA	7 cut(s)	88, 316, 543, 854, 1147, 1192, 1240
AjiI	CACGTC	1 cut(s)	1082
AjnI	CCWGG	4 cut(s)	361, 1051, 1351, 1957
AjuI	GAANNNNNNNTTGG	2 cut(s)	308, 340
Alw21I	GWGCWC	5 cut(s)	925, 1143, 1668, 1906, 2096
Alw26I	GTCTC	4 cut(s)	238, 723, 1312, 1840
Alw44I	GTGCAC	1 cut(s)	1902
AlwI	GGATC	5 cut(s)	1043, 1709, 1949, 1962, 1983
AlwNI	CAGNNNCTG	1 cut(s)	1964
Aor51HI	AGCGCT	1 cut(s)	55
AoxI	GGCC	3 cut(s)	197, 507, 1118
ApaLI	GTGCAC	1 cut(s)	1902
ApeKI	GCWGC	1 cut(s)	1676
ApoI	RAATTY	2 cut(s)	1448, 1574
ArsI	GACNNNNNNTTYG	2 cut(s)	170, 202
Asp700I	GAANNNNTTC	1 cut(s)	1523
AspLEI	GCGC	2 cut(s)	56, 251
AspS9I	GGNCC	2 cut(s)	1178, 1871
AsuHPI	GGTGA	3 cut(s)	1367, 1979, 2042
AvaII	GGWCC	2 cut(s)	1178, 1871
BaeGI	GKGCMC	2 cut(s)	74, 1906
BalI	TGGCCA	1 cut(s)	1120
BamHI	GGATCC	1 cut(s)	1954
BanI	GGYRCC	2 cut(s)	71, 248
BanII	GRGCYC	1 cut(s)	1668
BauI	CACGAG	1 cut(s)	531
BbsI	GAAGAC	1 cut(s)	53
Bbv12I	GWGCWC	5 cut(s)	925, 1143, 1668, 1906, 2096
BbvI	GCAGC	1 cut(s)	1688
BccI	CCATC	2 cut(s)	911, 1110
BceAI	ACGGC	2 cut(s)	494, 522
BcgI	CGANNNNNNTGC	4 cut(s)	1480, 1514, 1834, 1868
BciT130I	CCWGG	4 cut(s)	363, 1053, 1353, 1959
BciVI	GTATCC	2 cut(s)	784, 961
BclI	TGATCA	1 cut(s)	1732
BcoDI	GTCTC	4 cut(s)	238, 723, 1312, 1840
BfaI	CTAG	2 cut(s)	593, 1064
BfmI	CTRYAG	2 cut(s)	690, 1365
BfoI	RGCGCY	2 cut(s)	57, 252
BfuI	GTATCC	2 cut(s)	784, 961
BisI	GCNGC	3 cut(s)	252, 953, 1677
BlpI	GCTNAGC	1 cut(s)	1806
BlsI	GCNGC	3 cut(s)	253, 954, 1678
BmcAI	AGTACT	2 cut(s)	1004, 1683
Bme1390I	CCNGG	4 cut(s)	363, 1053, 1353, 1959
Bme18I	GGWCC	2 cut(s)	1178, 1871
BmgBI	CACGTC	1 cut(s)	1082
BmgT120I	GGNCC	2 cut(s)	1178, 1871
BmiI	GGNNCC	8 cut(s)	73, 250, 603, 1179, 1180, 1872, 1873, 1956
BmrFI	CCNGG	4 cut(s)	363, 1053, 1353, 1959
BmrI	ACTGGG	1 cut(s)	1323
BmsI	GCATC	8 cut(s)	321, 1025, 1091, 1141, 1258, 1399, 1770, 1819
BmuI	ACTGGG	1 cut(s)	1323
BpiI	GAAGAC	1 cut(s)	53
BpmI	CTGGAG	1 cut(s)	1523
Bpu1102I	GCTNAGC	1 cut(s)	1806
BpuEI	CTTGAG	2 cut(s)	34, 1682
BsaAI	YACGTR	2 cut(s)	1229, 1771
BsaHI	GRCGYC	2 cut(s)	249, 2034
BsaJI	CCNNGG	4 cut(s)	362, 1087, 1788, 1958
Bsc4I	CCNNNNNNNGG	3 cut(s)	1229, 1388, 1964
Bse1I	ACTGG	4 cut(s)	603, 1318, 1858, 2065
Bse3DI	GCAATG	1 cut(s)	882
BseBI	CCWGG	4 cut(s)	363, 1053, 1353, 1959
BseDI	CCNNGG	4 cut(s)	362, 1087, 1788, 1958
BseGI	GGATG	3 cut(s)	823, 1636, 1840
BseLI	CCNNNNNNNGG	3 cut(s)	1229, 1388, 1964
BseMI	GCAATG	1 cut(s)	882
BseMII	CTCAG	2 cut(s)	1441, 1820
BseNI	ACTGG	4 cut(s)	603, 1318, 1858, 2065
BseRI	GAGGAG	2 cut(s)	629, 915
BseSI	GKGCMC	2 cut(s)	74, 1906
BseX3I	CGGCCG	1 cut(s)	507
BseXI	GCAGC	1 cut(s)	1688
Bsh1236I	CGCG	1 cut(s)	310
Bsh1285I	CGRYCG	1 cut(s)	510
BshFI	GGCC	3 cut(s)	199, 509, 1120
BshNI	GGYRCC	2 cut(s)	71, 248
BsiEI	CGRYCG	1 cut(s)	510
BsiHKAI	GWGCWC	5 cut(s)	925, 1143, 1668, 1906, 2096
BslFI	GGGAC	5 cut(s)	773, 1164, 1364, 1728, 1857
BslI	CCNNNNNNNGG	3 cut(s)	1229, 1388, 1964
BsmAI	GTCTC	4 cut(s)	238, 723, 1312, 1840
BsmBI	CGTCTC	1 cut(s)	723
BsmFI	GGGAC	5 cut(s)	773, 1164, 1364, 1728, 1857
BsmI	GAATGC	1 cut(s)	1213
BsnI	GGCC	3 cut(s)	199, 509, 1120
Bsp1286I	GDGCHC	6 cut(s)	74, 925, 1143, 1668, 1906, 2096
Bsp1407I	TGTACA	1 cut(s)	1338
Bsp143I	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
Bsp1720I	GCTNAGC	1 cut(s)	1806
BspACI	CCGC	2 cut(s)	252, 953
BspANI	GGCC	3 cut(s)	199, 509, 1120
BspCNI	CTCAG	2 cut(s)	1440, 1819
BspFNI	CGCG	1 cut(s)	310
BspLI	GGNNCC	8 cut(s)	73, 250, 603, 1179, 1180, 1872, 1873, 1956
BspPI	GGATC	5 cut(s)	1043, 1709, 1949, 1962, 1983
BspQI	GCTCTTC	2 cut(s)	954, 1065
BspT107I	GGYRCC	2 cut(s)	71, 248
BsrDI	GCAATG	1 cut(s)	882
BsrGI	TGTACA	1 cut(s)	1338
BsrI	ACTGG	4 cut(s)	603, 1318, 1858, 2065
BssECI	CCNNGG	4 cut(s)	362, 1087, 1788, 1958
BssMI	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
BssNI	GRCGYC	2 cut(s)	249, 2034
BssSI	CACGAG	1 cut(s)	531
BssT1I	CCWWGG	2 cut(s)	1087, 1788
Bst2BI	CACGAG	1 cut(s)	531
Bst2UI	CCWGG	4 cut(s)	363, 1053, 1353, 1959
Bst4CI	ACNGT	4 cut(s)	76, 583, 1800, 1851
Bst6I	CTCTTC	5 cut(s)	30, 89, 954, 1065, 1087
BstACI	GRCGYC	2 cut(s)	249, 2034
BstAPI	GCANNNNNTGC	1 cut(s)	1696
BstAUI	TGTACA	1 cut(s)	1338
BstBAI	YACGTR	2 cut(s)	1229, 1771
BstC8I	GCNNGC	6 cut(s)	873, 889, 1077, 1106, 1488, 1668
BstDEI	CTNAG	4 cut(s)	209, 1427, 1685, 1806
BstENI	CCTNNNNNAGG	1 cut(s)	1386
BstF5I	GGATG	3 cut(s)	823, 1636, 1840
BstFNI	CGCG	1 cut(s)	310
BstH2I	RGCGCY	2 cut(s)	57, 252
BstHHI	GCGC	2 cut(s)	56, 251
BstKTI	GATC	5 cut(s)	1051, 1717, 1735, 1957, 1978
BstMAI	GTCTC	4 cut(s)	238, 723, 1312, 1840
BstMBI	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
BstMCI	CGRYCG	1 cut(s)	510
BstMWI	GCNNNNNNNGC	7 cut(s)	248, 257, 316, 402, 961, 1676, 1696
BstNI	CCWGG	4 cut(s)	363, 1053, 1353, 1959
BstNSI	RCATGY	2 cut(s)	242, 1490
BstSCI	CCNGG	4 cut(s)	361, 1051, 1351, 1957
BstSFI	CTRYAG	2 cut(s)	690, 1365
BstSLI	GKGCMC	2 cut(s)	74, 1906
BstSNI	TACGTA	1 cut(s)	1771
BstUI	CGCG	1 cut(s)	310
BstV1I	GCAGC	1 cut(s)	1688
BstV2I	GAAGAC	1 cut(s)	53
BstX2I	RGATCY	1 cut(s)	1954
BstYI	RGATCY	1 cut(s)	1954
BstZI	CGGCCG	1 cut(s)	507
BsuI	GTATCC	2 cut(s)	784, 961
BsuRI	GGCC	3 cut(s)	199, 509, 1120
BtrI	CACGTC	1 cut(s)	1082
BtsCI	GGATG	3 cut(s)	823, 1636, 1840
BtsIMutI	CAGTG	3 cut(s)	1035, 1435, 1865
Cac8I	GCNNGC	6 cut(s)	873, 889, 1077, 1106, 1488, 1668
CaiI	CAGNNNCTG	1 cut(s)	1964
CfoI	GCGC	2 cut(s)	56, 251
Cfr13I	GGNCC	2 cut(s)	1178, 1871
CseI	GACGC	1 cut(s)	2042
Csp6I	GTAC	8 cut(s)	370, 1003, 1171, 1339, 1682, 1768, 1982, 2003
CspCI	CAANNNNNGTGG	4 cut(s)	365, 400, 968, 1003
CviAII	CATG	6 cut(s)	184, 239, 1487, 1691, 1823, 2097
CviQI	GTAC	8 cut(s)	370, 1003, 1171, 1339, 1682, 1768, 1982, 2003
DdeI	CTNAG	4 cut(s)	209, 1427, 1685, 1806
DinI	GGCGCC	1 cut(s)	250
DpnI	GATC	5 cut(s)	1050, 1716, 1734, 1956, 1977
DpnII	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
DraIII	CACNNNGTG	1 cut(s)	611
EaeI	YGGCCR	3 cut(s)	197, 507, 1118
EagI	CGGCCG	1 cut(s)	507
Eam1104I	CTCTTC	5 cut(s)	30, 89, 954, 1065, 1087
EarI	CTCTTC	5 cut(s)	30, 89, 954, 1065, 1087
Ecl136II	GAGCTC	1 cut(s)	1666
EclXI	CGGCCG	1 cut(s)	507
Eco105I	TACGTA	1 cut(s)	1771
Eco130I	CCWWGG	2 cut(s)	1087, 1788
Eco24I	GRGCYC	1 cut(s)	1668
Eco32I	GATATC	1 cut(s)	841
Eco47I	GGWCC	2 cut(s)	1178, 1871
Eco47III	AGCGCT	1 cut(s)	55
Eco52I	CGGCCG	1 cut(s)	507
Eco53kI	GAGCTC	1 cut(s)	1666
Eco57I	CTGAAG	2 cut(s)	978, 1089
EcoICRI	GAGCTC	1 cut(s)	1666
EcoNI	CCTNNNNNAGG	1 cut(s)	1386
EcoO109I	RGGNCCY	2 cut(s)	1178, 1871
EcoRII	CCWGG	4 cut(s)	361, 1051, 1351, 1957
EcoRV	GATATC	1 cut(s)	841
EcoT14I	CCWWGG	2 cut(s)	1087, 1788
EcoT22I	ATGCAT	1 cut(s)	1273
EcoT38I	GRGCYC	1 cut(s)	1668
EgeI	GGCGCC	1 cut(s)	250
EheI	GGCGCC	1 cut(s)	250
ErhI	CCWWGG	2 cut(s)	1087, 1788
Esp3I	CGTCTC	1 cut(s)	723
FaeI	CATG	6 cut(s)	187, 242, 1490, 1694, 1826, 2100
FalI	AAGNNNNNCTT	6 cut(s)	23, 55, 1511, 1543, 1636, 1668
FaqI	GGGAC	5 cut(s)	773, 1164, 1364, 1728, 1857
FatI	CATG	6 cut(s)	183, 238, 1486, 1690, 1822, 2096
FbaI	TGATCA	1 cut(s)	1732
Fnu4HI	GCNGC	3 cut(s)	252, 953, 1677
FokI	GGATG	3 cut(s)	830, 1643, 1827
FriOI	GRGCYC	1 cut(s)	1668
Fsp4HI	GCNGC	3 cut(s)	252, 953, 1677
FspBI	CTAG	2 cut(s)	593, 1064
GlaI	GCGC	2 cut(s)	55, 250
GluI	GCNGC	3 cut(s)	252, 953, 1677
GsuI	CTGGAG	1 cut(s)	1523
HaeII	RGCGCY	2 cut(s)	57, 252
HaeIII	GGCC	3 cut(s)	199, 509, 1120
HgaI	GACGC	1 cut(s)	2042
HhaI	GCGC	2 cut(s)	56, 251
Hin1I	GRCGYC	2 cut(s)	249, 2034
Hin1II	CATG	6 cut(s)	187, 242, 1490, 1694, 1826, 2100
Hin6I	GCGC	2 cut(s)	54, 249
HinP1I	GCGC	2 cut(s)	54, 249
HincII	GTYRAC	1 cut(s)	1362
HindII	GTYRAC	1 cut(s)	1362
HindIII	AAGCTT	1 cut(s)	869
HinfI	GANTC	6 cut(s)	153, 407, 1110, 1285, 1634, 1750
HphI	GGTGA	3 cut(s)	1367, 1979, 2042
Hpy166II	GTNNAC	5 cut(s)	93, 292, 1362, 1703, 1904
Hpy188III	TCNNGA	7 cut(s)	531, 758, 1020, 1181, 1481, 1661, 1952
Hpy8I	GTNNAC	5 cut(s)	93, 292, 1362, 1703, 1904
Hpy99I	CGWCG	1 cut(s)	1086
HpyAV	CCTTC	7 cut(s)	129, 564, 848, 1006, 1186, 1649, 1993
HpyCH4III	ACNGT	4 cut(s)	76, 583, 1800, 1851
HpyCH4IV	ACGT	5 cut(s)	1081, 1228, 1537, 1741, 1770
HpyF10VI	GCNNNNNNNGC	7 cut(s)	248, 257, 316, 402, 961, 1676, 1696
HpyF3I	CTNAG	4 cut(s)	209, 1427, 1685, 1806
HpySE526I	ACGT	5 cut(s)	1081, 1228, 1537, 1741, 1770
Hsp92I	GRCGYC	2 cut(s)	249, 2034
Hsp92II	CATG	6 cut(s)	187, 242, 1490, 1694, 1826, 2100
HspAI	GCGC	2 cut(s)	54, 249
KasI	GGCGCC	1 cut(s)	248
KflI	GGGWCCC	2 cut(s)	1178, 1871
Ksp22I	TGATCA	1 cut(s)	1732
Kzo9I	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
LguI	GCTCTTC	2 cut(s)	954, 1065
LmnI	GCTCC	4 cut(s)	616, 637, 928, 1483
Lsp1109I	GCAGC	1 cut(s)	1688
LweI	GCATC	8 cut(s)	321, 1025, 1091, 1141, 1258, 1399, 1770, 1819
MaeI	CTAG	2 cut(s)	593, 1064
MaeII	ACGT	5 cut(s)	1081, 1228, 1537, 1741, 1770
MaeIII	GTNAC	5 cut(s)	528, 1369, 1922, 1967, 2030
MalI	GATC	5 cut(s)	1050, 1716, 1734, 1956, 1977
MboI	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
MfeI	CAATTG	1 cut(s)	302
MflI	RGATCY	1 cut(s)	1954
MhlI	GDGCHC	6 cut(s)	74, 925, 1143, 1668, 1906, 2096
MlsI	TGGCCA	1 cut(s)	1120
MluNI	TGGCCA	1 cut(s)	1120
Mly113I	GGCGCC	1 cut(s)	249
MlyI	GAGTC	3 cut(s)	147, 1119, 1279
MmeI	TCCRAC	1 cut(s)	493
MnlI	CCTC	9 cut(s)	33, 58, 406, 607, 936, 949, 1153, 1621, 1625
Mox20I	TGGCCA	1 cut(s)	1120
Mph1103I	ATGCAT	1 cut(s)	1273
MroXI	GAANNNNTTC	1 cut(s)	1523
MscI	TGGCCA	1 cut(s)	1120
MseI	TTAA	5 cut(s)	113, 297, 1007, 2070, 2085
MslI	CAYNNNNRTG	1 cut(s)	243
Msp20I	TGGCCA	1 cut(s)	1120
MspA1I	CMGCKG	1 cut(s)	260
MspR9I	CCNGG	4 cut(s)	363, 1053, 1353, 1959
MunI	CAATTG	1 cut(s)	302
Mva1269I	GAATGC	1 cut(s)	1213
MvaI	CCWGG	4 cut(s)	363, 1053, 1353, 1959
MvnI	CGCG	1 cut(s)	310
MwoI	GCNNNNNNNGC	7 cut(s)	248, 257, 316, 402, 961, 1676, 1696
NarI	GGCGCC	1 cut(s)	249
NdeII	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
NlaIII	CATG	6 cut(s)	187, 242, 1490, 1694, 1826, 2100
NlaIV	GGNNCC	8 cut(s)	73, 250, 603, 1179, 1180, 1872, 1873, 1956
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	4 cut(s)	528, 1922, 1967, 2030
NsiI	ATGCAT	1 cut(s)	1273
NspI	RCATGY	2 cut(s)	242, 1490
PaeI	GCATGC	1 cut(s)	1490
PciSI	GCTCTTC	2 cut(s)	954, 1065
PcsI	WCGNNNNNNNCGW	1 cut(s)	25
PctI	GAATGC	1 cut(s)	1213
PdmI	GAANNNNTTC	1 cut(s)	1523
PfeI	GAWTC	3 cut(s)	407, 1634, 1750
PflMI	CCANNNNNTGG	1 cut(s)	1964
PkrI	GCNGC	3 cut(s)	253, 954, 1678
PleI	GAGTC	3 cut(s)	147, 1118, 1279
PluTI	GGCGCC	1 cut(s)	252
PpsI	GAGTC	3 cut(s)	147, 1118, 1279
Ppu21I	YACGTR	2 cut(s)	1229, 1771
PpuMI	RGGWCCY	2 cut(s)	1178, 1871
Psp124BI	GAGCTC	1 cut(s)	1668
Psp1406I	AACGTT	1 cut(s)	1537
Psp5II	RGGWCCY	2 cut(s)	1178, 1871
Psp6I	CCWGG	4 cut(s)	361, 1051, 1351, 1957
PspGI	CCWGG	4 cut(s)	361, 1051, 1351, 1957
PspN4I	GGNNCC	8 cut(s)	73, 250, 603, 1179, 1180, 1872, 1873, 1956
PspPI	GGNCC	2 cut(s)	1178, 1871
PspPPI	RGGWCCY	2 cut(s)	1178, 1871
PstNI	CAGNNNCTG	1 cut(s)	1964
PsuI	RGATCY	1 cut(s)	1954
PvuII	CAGCTG	1 cut(s)	260
RsaI	GTAC	8 cut(s)	371, 1004, 1172, 1340, 1683, 1769, 1983, 2004
RsaNI	GTAC	8 cut(s)	370, 1003, 1171, 1339, 1682, 1768, 1982, 2003
RseI	CAYNNNNRTG	1 cut(s)	243
SacI	GAGCTC	1 cut(s)	1668
SapI	GCTCTTC	2 cut(s)	954, 1065
SaqAI	TTAA	5 cut(s)	113, 297, 1007, 2070, 2085
SatI	GCNGC	3 cut(s)	252, 953, 1677
Sau3AI	GATC	5 cut(s)	1048, 1714, 1732, 1954, 1975
Sau96I	GGNCC	2 cut(s)	1178, 1871
ScaI	AGTACT	2 cut(s)	1004, 1683
SchI	GAGTC	3 cut(s)	147, 1119, 1279
ScrFI	CCNGG	4 cut(s)	363, 1053, 1353, 1959
SduI	GDGCHC	6 cut(s)	74, 925, 1143, 1668, 1906, 2096
SfaNI	GCATC	8 cut(s)	321, 1025, 1091, 1141, 1258, 1399, 1770, 1819
SfcI	CTRYAG	2 cut(s)	690, 1365
SfoI	GGCGCC	1 cut(s)	250
SinI	GGWCC	2 cut(s)	1178, 1871
SmiMI	CAYNNNNRTG	1 cut(s)	243
SmlI	CTYRAG	2 cut(s)	49, 1661
SmoI	CTYRAG	2 cut(s)	49, 1661
SnaBI	TACGTA	1 cut(s)	1771
SphI	GCATGC	1 cut(s)	1490
SsiI	CCGC	2 cut(s)	252, 953
SspDI	GGCGCC	1 cut(s)	248
SspI	AATATT	1 cut(s)	1345
SspMI	CTAG	2 cut(s)	593, 1064
SstI	GAGCTC	1 cut(s)	1668
StyD4I	CCNGG	4 cut(s)	361, 1051, 1351, 1957
StyI	CCWWGG	2 cut(s)	1087, 1788
TaaI	ACNGT	4 cut(s)	76, 583, 1800, 1851
TaiI	ACGT	5 cut(s)	1084, 1231, 1540, 1744, 1773
TaqI	TCGA	2 cut(s)	19, 765
TatI	WGTACW	6 cut(s)	369, 1002, 1170, 1338, 1681, 1981
TauI	GCSGC	2 cut(s)	254, 955
TfiI	GAWTC	3 cut(s)	407, 1634, 1750
Tru1I	TTAA	5 cut(s)	113, 297, 1007, 2070, 2085
Tru9I	TTAA	5 cut(s)	113, 297, 1007, 2070, 2085
TscAI	CASTG	3 cut(s)	1042, 1435, 1865
TseFI	GTSAC	4 cut(s)	528, 1922, 1967, 2030
TseI	GCWGC	1 cut(s)	1676
Tsp45I	GTSAC	4 cut(s)	528, 1922, 1967, 2030
TspDTI	ATGAA	5 cut(s)	884, 1139, 1275, 1900, 1931
TspGWI	ACGGA	5 cut(s)	363, 668, 747, 1056, 2020
TspRI	CASTG	3 cut(s)	1042, 1435, 1865
Van91I	CCANNNNNTGG	1 cut(s)	1964
VneI	GTGCAC	1 cut(s)	1902
VpaK11BI	GGWCC	2 cut(s)	1178, 1871
XagI	CCTNNNNNAGG	1 cut(s)	1386
XapI	RAATTY	2 cut(s)	1448, 1574
XceI	RCATGY	2 cut(s)	242, 1490
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1650
XmnI	GAANNNNTTC	1 cut(s)	1523
XspI	CTAG	2 cut(s)	593, 1064
ZrmI	AGTACT	2 cut(s)	1004, 1683
Zsp2I	ATGCAT	1 cut(s)	1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.