Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Reverse (-)
19670395 .. 19671059
AT1G52825.2
Length: 237 bp
ATGTCATCAGTAGGAACATCAAAGGGGATTCTAGAAATCGCCAAATTCGGTGTATACGTCGCAGTACCAATCGTCCTAATCTATACATTCGCCAACAACAGCACCAACATCAAGAAATTCATGGGCAATCATTCATACGTTGTTTATCCTAAAGAAGCTCCTCGTCCTCCTTCACCTGAAGAGCTACGTGAGATGGCTAAACAACTTGCCCTCAAAAAAAAAAAAAATCCCTTCTAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
9.87
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Pet100 |
PF09803 |
10 - 75 |
1.4e-07 |
Pet100 |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0010124)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AccI |
GTMKAC |
1 cut(s)
|
54 |
| AcsI |
RAATTY |
2 cut(s)
|
44, 116 |
| AcuI |
CTGAAG |
1 cut(s)
|
198 |
| AfaI |
GTAC |
1 cut(s)
|
66 |
| AluBI |
AGCT |
2 cut(s)
|
158, 184 |
| AluI |
AGCT |
2 cut(s)
|
158, 184 |
| ApoI |
RAATTY |
2 cut(s)
|
44, 116 |
| AsuHPI |
GGTGA |
1 cut(s)
|
165 |
| BccI |
CCATC |
1 cut(s)
|
187 |
| BfaI |
CTAG |
1 cut(s)
|
32 |
| BsaAI |
YACGTR |
1 cut(s)
|
188 |
| BseRI |
GAGGAG |
1 cut(s)
|
150 |
| BspQI |
GCTCTTC |
1 cut(s)
|
174 |
| BssNAI |
GTATAC |
1 cut(s)
|
55 |
| Bst1107I |
GTATAC |
1 cut(s)
|
55 |
| Bst6I |
CTCTTC |
1 cut(s)
|
174 |
| BstBAI |
YACGTR |
1 cut(s)
|
188 |
| BstZ17I |
GTATAC |
1 cut(s)
|
55 |
| Csp6I |
GTAC |
1 cut(s)
|
65 |
| CviAII |
CATG |
1 cut(s)
|
121 |
| CviJI |
RGCY |
3 cut(s)
|
158, 184, 197 |
| CviKI_1 |
RGCY |
3 cut(s)
|
158, 184, 197 |
| CviQI |
GTAC |
1 cut(s)
|
65 |
| Eam1104I |
CTCTTC |
1 cut(s)
|
174 |
| EarI |
CTCTTC |
1 cut(s)
|
174 |
| Eco57I |
CTGAAG |
1 cut(s)
|
198 |
| FaeI |
CATG |
1 cut(s)
|
124 |
| FaiI |
YATR |
4 cut(s)
|
55, 84, 122, 136 |
| FatI |
CATG |
1 cut(s)
|
120 |
| FblI |
GTMKAC |
1 cut(s)
|
54 |
| FspBI |
CTAG |
1 cut(s)
|
32 |
| Hin1II |
CATG |
1 cut(s)
|
124 |
| HinfI |
GANTC |
1 cut(s)
|
28 |
| HphI |
GGTGA |
1 cut(s)
|
165 |
| Hpy166II |
GTNNAC |
1 cut(s)
|
55 |
| Hpy188III |
TCNNGA |
2 cut(s)
|
32, 112 |
| Hpy8I |
GTNNAC |
1 cut(s)
|
55 |
| Hpy99I |
CGWCG |
1 cut(s)
|
62 |
| HpyAV |
CCTTC |
1 cut(s)
|
180 |
| HpyCH4IV |
ACGT |
3 cut(s)
|
57, 138, 187 |
| HpySE526I |
ACGT |
3 cut(s)
|
57, 138, 187 |
| Hsp92II |
CATG |
1 cut(s)
|
124 |
| LguI |
GCTCTTC |
1 cut(s)
|
174 |
| LmnI |
GCTCC |
1 cut(s)
|
163 |
| LpnPI |
CCDG |
1 cut(s)
|
189 |
| MaeI |
CTAG |
1 cut(s)
|
32 |
| MaeII |
ACGT |
3 cut(s)
|
57, 138, 187 |
| MboII |
GAAGA |
1 cut(s)
|
191 |
| MluCI |
AATT |
2 cut(s)
|
44, 116 |
| MnlI |
CCTC |
3 cut(s)
|
171, 177, 221 |
| NlaIII |
CATG |
1 cut(s)
|
124 |
| PciSI |
GCTCTTC |
1 cut(s)
|
174 |
| PcsI |
WCGNNNNNNNCGW |
1 cut(s)
|
54 |
| PfeI |
GAWTC |
1 cut(s)
|
28 |
| Ppu21I |
YACGTR |
1 cut(s)
|
188 |
| RsaI |
GTAC |
1 cut(s)
|
66 |
| RsaNI |
GTAC |
1 cut(s)
|
65 |
| SapI |
GCTCTTC |
1 cut(s)
|
174 |
| SetI |
ASST |
6 cut(s)
|
60, 141, 160, 178, 186, 190 |
| SgeI |
CNNG |
7 cut(s)
|
44, 124, 133, 174, 188, 200, 218 |
| Sse9I |
AATT |
2 cut(s)
|
44, 116 |
| SspMI |
CTAG |
1 cut(s)
|
32 |
| TaiI |
ACGT |
3 cut(s)
|
60, 141, 190 |
| TasI |
AATT |
2 cut(s)
|
44, 116 |
| TfiI |
GAWTC |
1 cut(s)
|
28 |
| TspDTI |
ATGAA |
2 cut(s)
|
109, 123 |
| XapI |
RAATTY |
2 cut(s)
|
44, 116 |
| XbaI |
TCTAGA |
1 cut(s)
|
31 |
| XmiI |
GTMKAC |
1 cut(s)
|
54 |
| XspI |
CTAG |
1 cut(s)
|
32 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.