Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55150 AT1G55150 |
| fragaria_vesca | FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 |
| malus_domestica | MD09G1194200.v1.1 MD17G1174700.v1.1 |
| prunus_persica | Prupe.3G019300_v2.0.a1 Prupe.3G019300_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1 |
| pyrus_communis | pycom09g11070 |
| rosa_chinensis | RchiOBHm_Chr2g0142931 |
| rosa_laevigata | RLG00000019997 |
| rosa_multiflora | Rmu_sc0028648.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00102220 Rroxscaffold_2G00103260 |
| rosa_rugosa | Rorug02G0377000 Rorug02G0377100 Rorug02G0377200 |
| rosa_samantha | Rh2AG430000 Rh2BG439000 Rh2CG362000 Rh2CG415500 Rh2DG449000 |
| rosa_wichuraiana | Rw2G035130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 900 |
| Acc36I | ACCTGC | 1 cut(s) | 475 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1463 |
| AccBSI | CCGCTC | 1 cut(s) | 1445 |
| AccIII | TCCGGA | 1 cut(s) | 801 |
| AciI | CCGC | 4 cut(s) | 204, 212, 1142, 1443 |
| AclWI | GGATC | 3 cut(s) | 793, 931, 1276 |
| AcoI | YGGCCR | 2 cut(s) | 389, 824 |
| AcsI | RAATTY | 3 cut(s) | 184, 581, 1038 |
| AfaI | GTAC | 3 cut(s) | 41, 845, 1441 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 736, 1457, 1463 |
| AgsI | TTSAA | 3 cut(s) | 269, 937, 1428 |
| AjiI | CACGTC | 2 cut(s) | 410, 1228 |
| AjnI | CCWGG | 3 cut(s) | 688, 1264, 1456 |
| Alw26I | GTCTC | 2 cut(s) | 204, 1470 |
| AlwI | GGATC | 3 cut(s) | 793, 931, 1276 |
| Aor13HI | TCCGGA | 1 cut(s) | 801 |
| AoxI | GGCC | 6 cut(s) | 389, 514, 638, 824, 860, 1106 |
| ApeKI | GCWGC | 1 cut(s) | 1211 |
| ApoI | RAATTY | 3 cut(s) | 184, 581, 1038 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 50, 82, 1069, 1101 |
| AspS9I | GGNCC | 3 cut(s) | 21, 515, 638 |
| AsuC2I | CCSGG | 1 cut(s) | 1315 |
| AsuHPI | GGTGA | 2 cut(s) | 521, 1015 |
| AvaII | GGWCC | 1 cut(s) | 21 |
| AxyI | CCTNAGG | 1 cut(s) | 864 |
| BalI | TGGCCA | 1 cut(s) | 391 |
| BauI | CACGAG | 2 cut(s) | 543, 1215 |
| BbsI | GAAGAC | 1 cut(s) | 1039 |
| BbvI | GCAGC | 1 cut(s) | 1223 |
| BccI | CCATC | 5 cut(s) | 122, 155, 703, 1022, 1094 |
| BceAI | ACGGC | 1 cut(s) | 529 |
| BciT130I | CCWGG | 3 cut(s) | 690, 1266, 1458 |
| BcnI | CCSGG | 1 cut(s) | 1315 |
| BcoDI | GTCTC | 2 cut(s) | 204, 1470 |
| BfaI | CTAG | 2 cut(s) | 111, 152 |
| BfmI | CTRYAG | 1 cut(s) | 1200 |
| BfuAI | ACCTGC | 1 cut(s) | 475 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 24 |
| BisI | GCNGC | 2 cut(s) | 213, 1212 |
| BlsI | GCNGC | 2 cut(s) | 214, 1213 |
| Bme1390I | CCNGG | 4 cut(s) | 690, 1266, 1315, 1458 |
| Bme18I | GGWCC | 1 cut(s) | 21 |
| BmgBI | CACGTC | 2 cut(s) | 410, 1228 |
| BmgT120I | GGNCC | 3 cut(s) | 21, 515, 638 |
| BmiI | GGNNCC | 1 cut(s) | 630 |
| BmrFI | CCNGG | 4 cut(s) | 690, 1266, 1315, 1458 |
| BmsI | GCATC | 1 cut(s) | 584 |
| BpiI | GAAGAC | 1 cut(s) | 1039 |
| BpmI | CTGGAG | 4 cut(s) | 641, 868, 1295, 1440 |
| Bpu10I | CCTNAGC | 2 cut(s) | 94, 251 |
| BpuEI | CTTGAG | 2 cut(s) | 627, 1034 |
| BpuMI | CCSGG | 1 cut(s) | 1315 |
| BsaI | GGTCTC | 1 cut(s) | 1470 |
| BsaJI | CCNNGG | 7 cut(s) | 143, 689, 1264, 1314, 1368, 1457, 1480 |
| BsaWI | WCCGGW | 1 cut(s) | 801 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1432, 1462 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 736, 1457, 1463 |
| Bse118I | RCCGGY | 1 cut(s) | 23 |
| Bse1I | ACTGG | 4 cut(s) | 439, 555, 851, 1278 |
| Bse21I | CCTNAGG | 1 cut(s) | 864 |
| Bse3DI | GCAATG | 2 cut(s) | 139, 423 |
| BseAI | TCCGGA | 1 cut(s) | 801 |
| BseBI | CCWGG | 3 cut(s) | 690, 1266, 1458 |
| BseDI | CCNNGG | 7 cut(s) | 143, 689, 1264, 1314, 1368, 1457, 1480 |
| BseGI | GGATG | 4 cut(s) | 590, 763, 1033, 1105 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 736, 1457, 1463 |
| BseMI | GCAATG | 2 cut(s) | 139, 423 |
| BseMII | CTCAG | 4 cut(s) | 75, 108, 395, 809 |
| BseNI | ACTGG | 4 cut(s) | 439, 555, 851, 1278 |
| BseRI | GAGGAG | 3 cut(s) | 1437, 1440, 1443 |
| BseXI | GCAGC | 1 cut(s) | 1223 |
| BsgI | GTGCAG | 1 cut(s) | 578 |
| BshFI | GGCC | 6 cut(s) | 391, 516, 640, 826, 862, 1108 |
| BsiSI | CCGG | 4 cut(s) | 19, 24, 802, 1314 |
| BslFI | GGGAC | 3 cut(s) | 88, 420, 1398 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 736, 1457, 1463 |
| BsmAI | GTCTC | 2 cut(s) | 204, 1470 |
| BsmFI | GGGAC | 3 cut(s) | 88, 420, 1398 |
| BsmI | GAATGC | 1 cut(s) | 777 |
| BsnI | GGCC | 6 cut(s) | 391, 516, 640, 826, 862, 1108 |
| Bso31I | GGTCTC | 1 cut(s) | 1470 |
| Bsp13I | TCCGGA | 1 cut(s) | 801 |
| Bsp143I | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| BspACI | CCGC | 4 cut(s) | 204, 212, 1142, 1443 |
| BspANI | GGCC | 6 cut(s) | 391, 516, 640, 826, 862, 1108 |
| BspCNI | CTCAG | 4 cut(s) | 74, 107, 394, 808 |
| BspEI | TCCGGA | 1 cut(s) | 801 |
| BspLI | GGNNCC | 1 cut(s) | 630 |
| BspMI | ACCTGC | 1 cut(s) | 475 |
| BspPI | GGATC | 3 cut(s) | 793, 931, 1276 |
| BspTNI | GGTCTC | 1 cut(s) | 1470 |
| BsrBI | CCGCTC | 1 cut(s) | 1445 |
| BsrDI | GCAATG | 2 cut(s) | 139, 423 |
| BsrFI | RCCGGY | 1 cut(s) | 23 |
| BsrI | ACTGG | 4 cut(s) | 439, 555, 851, 1278 |
| BssAI | RCCGGY | 1 cut(s) | 23 |
| BssECI | CCNNGG | 7 cut(s) | 143, 689, 1264, 1314, 1368, 1457, 1480 |
| BssMI | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| BssSI | CACGAG | 2 cut(s) | 543, 1215 |
| BssT1I | CCWWGG | 2 cut(s) | 143, 1368 |
| Bst2BI | CACGAG | 2 cut(s) | 543, 1215 |
| Bst2UI | CCWGG | 3 cut(s) | 690, 1266, 1458 |
| Bst4CI | ACNGT | 7 cut(s) | 44, 50, 265, 833, 947, 1348, 1481 |
| Bst6I | CTCTTC | 2 cut(s) | 330, 1486 |
| BstC8I | GCNNGC | 1 cut(s) | 1110 |
| BstDEI | CTNAG | 6 cut(s) | 61, 94, 251, 381, 795, 864 |
| BstDSI | CCRYGG | 1 cut(s) | 1480 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1455 |
| BstF5I | GGATG | 4 cut(s) | 590, 763, 1033, 1105 |
| BstKTI | GATC | 8 cut(s) | 415, 655, 675, 769, 801, 926, 1175, 1271 |
| BstMAI | GTCTC | 2 cut(s) | 204, 1470 |
| BstMBI | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 15, 24, 212, 565, 646, 947, 1364 |
| BstNI | CCWGG | 3 cut(s) | 690, 1266, 1458 |
| BstSCI | CCNGG | 4 cut(s) | 688, 1264, 1313, 1456 |
| BstSFI | CTRYAG | 1 cut(s) | 1200 |
| BstV1I | GCAGC | 1 cut(s) | 1223 |
| BstV2I | GAAGAC | 1 cut(s) | 1039 |
| BstX2I | RGATCY | 2 cut(s) | 798, 923 |
| BstYI | RGATCY | 2 cut(s) | 798, 923 |
| Bsu36I | CCTNAGG | 1 cut(s) | 864 |
| BsuRI | GGCC | 6 cut(s) | 391, 516, 640, 826, 862, 1108 |
| BtgI | CCRYGG | 1 cut(s) | 1480 |
| BtrI | CACGTC | 2 cut(s) | 410, 1228 |
| BtsCI | GGATG | 4 cut(s) | 590, 763, 1033, 1105 |
| BtsIMutI | CAGTG | 1 cut(s) | 1271 |
| BveI | ACCTGC | 1 cut(s) | 475 |
| Cac8I | GCNNGC | 1 cut(s) | 1110 |
| Cfr10I | RCCGGY | 1 cut(s) | 23 |
| Cfr13I | GGNCC | 3 cut(s) | 21, 515, 638 |
| CpoI | CGGWCCG | 1 cut(s) | 21 |
| Csp6I | GTAC | 3 cut(s) | 40, 844, 1440 |
| CspI | CGGWCCG | 1 cut(s) | 21 |
| CviAII | CATG | 5 cut(s) | 479, 506, 706, 1096, 1124 |
| CviQI | GTAC | 3 cut(s) | 40, 844, 1440 |
| DdeI | CTNAG | 6 cut(s) | 61, 94, 251, 381, 795, 864 |
| DpnI | GATC | 8 cut(s) | 414, 654, 674, 768, 800, 925, 1174, 1270 |
| DpnII | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| EaeI | YGGCCR | 2 cut(s) | 389, 824 |
| Eam1104I | CTCTTC | 2 cut(s) | 330, 1486 |
| EarI | CTCTTC | 2 cut(s) | 330, 1486 |
| Eco130I | CCWWGG | 2 cut(s) | 143, 1368 |
| Eco31I | GGTCTC | 1 cut(s) | 1470 |
| Eco47I | GGWCC | 1 cut(s) | 21 |
| Eco81I | CCTNAGG | 1 cut(s) | 864 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1455 |
| EcoO109I | RGGNCCY | 1 cut(s) | 638 |
| EcoRI | GAATTC | 1 cut(s) | 1038 |
| EcoRII | CCWGG | 3 cut(s) | 688, 1264, 1456 |
| EcoT14I | CCWWGG | 2 cut(s) | 143, 1368 |
| ErhI | CCWWGG | 2 cut(s) | 143, 1368 |
| FaeI | CATG | 5 cut(s) | 482, 509, 709, 1099, 1127 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 727, 759 |
| FaqI | GGGAC | 3 cut(s) | 88, 420, 1398 |
| FatI | CATG | 5 cut(s) | 478, 505, 705, 1095, 1123 |
| FauI | CCCGC | 1 cut(s) | 211 |
| FauNDI | CATATG | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 2 cut(s) | 213, 1212 |
| FokI | GGATG | 4 cut(s) | 577, 770, 1040, 1112 |
| Fsp4HI | GCNGC | 2 cut(s) | 213, 1212 |
| FspBI | CTAG | 2 cut(s) | 111, 152 |
| GluI | GCNGC | 2 cut(s) | 213, 1212 |
| GsuI | CTGGAG | 4 cut(s) | 641, 868, 1295, 1440 |
| HaeIII | GGCC | 6 cut(s) | 391, 516, 640, 826, 862, 1108 |
| HapII | CCGG | 4 cut(s) | 19, 24, 802, 1314 |
| Hin1II | CATG | 5 cut(s) | 482, 509, 709, 1099, 1127 |
| HpaII | CCGG | 4 cut(s) | 19, 24, 802, 1314 |
| HphI | GGTGA | 2 cut(s) | 521, 1015 |
| Hpy166II | GTNNAC | 2 cut(s) | 548, 1288 |
| Hpy188I | TCNGA | 5 cut(s) | 798, 931, 979, 1165, 1475 |
| Hpy188III | TCNNGA | 8 cut(s) | 295, 305, 320, 441, 545, 658, 802, 1415 |
| Hpy8I | GTNNAC | 2 cut(s) | 548, 1288 |
| Hpy99I | CGWCG | 1 cut(s) | 54 |
| HpyAV | CCTTC | 4 cut(s) | 263, 340, 397, 729 |
| HpyCH4III | ACNGT | 7 cut(s) | 44, 50, 265, 833, 947, 1348, 1481 |
| HpyCH4IV | ACGT | 3 cut(s) | 409, 1206, 1227 |
| HpyCH4V | TGCA | 5 cut(s) | 559, 615, 950, 1211, 1352 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 15, 24, 212, 565, 646, 947, 1364 |
| HpyF3I | CTNAG | 6 cut(s) | 61, 94, 251, 381, 795, 864 |
| HpySE526I | ACGT | 3 cut(s) | 409, 1206, 1227 |
| Hsp92II | CATG | 5 cut(s) | 482, 509, 709, 1099, 1127 |
| Kpn2I | TCCGGA | 1 cut(s) | 801 |
| Kzo9I | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| LmnI | GCTCC | 4 cut(s) | 541, 1450, 1485, 1500 |
| Lsp1109I | GCAGC | 1 cut(s) | 1223 |
| LweI | GCATC | 1 cut(s) | 584 |
| MaeI | CTAG | 2 cut(s) | 111, 152 |
| MaeII | ACGT | 3 cut(s) | 409, 1206, 1227 |
| MaeIII | GTNAC | 5 cut(s) | 44, 56, 509, 739, 1070 |
| MalI | GATC | 8 cut(s) | 414, 654, 674, 768, 800, 925, 1174, 1270 |
| MbiI | CCGCTC | 1 cut(s) | 1445 |
| MboI | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| MboII | GAAGA | 7 cut(s) | 193, 347, 898, 918, 1039, 1333, 1503 |
| MflI | RGATCY | 2 cut(s) | 798, 923 |
| MlsI | TGGCCA | 1 cut(s) | 391 |
| MluCI | AATT | 9 cut(s) | 184, 258, 581, 600, 807, 951, 960, 1038, 1418 |
| MluNI | TGGCCA | 1 cut(s) | 391 |
| MlyI | GAGTC | 7 cut(s) | 13, 53, 163, 206, 442, 722, 1420 |
| Mox20I | TGGCCA | 1 cut(s) | 391 |
| MroI | TCCGGA | 1 cut(s) | 801 |
| MscI | TGGCCA | 1 cut(s) | 391 |
| MseI | TTAA | 4 cut(s) | 342, 483, 603, 698 |
| MslI | CAYNNNNRTG | 1 cut(s) | 483 |
| Msp20I | TGGCCA | 1 cut(s) | 391 |
| MspA1I | CMGCKG | 1 cut(s) | 206 |
| MspI | CCGG | 4 cut(s) | 19, 24, 802, 1314 |
| MspR9I | CCNGG | 4 cut(s) | 690, 1266, 1315, 1458 |
| Mva1269I | GAATGC | 1 cut(s) | 777 |
| MvaI | CCWGG | 3 cut(s) | 690, 1266, 1458 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 15, 24, 212, 565, 646, 947, 1364 |
| NciI | CCSGG | 1 cut(s) | 1315 |
| NdeI | CATATG | 1 cut(s) | 85 |
| NdeII | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| NlaIII | CATG | 5 cut(s) | 482, 509, 709, 1099, 1127 |
| NlaIV | GGNNCC | 1 cut(s) | 630 |
| NmuCI | GTSAC | 4 cut(s) | 44, 56, 509, 1070 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 519, 829 |
| PctI | GAATGC | 1 cut(s) | 777 |
| PfeI | GAWTC | 4 cut(s) | 29, 137, 1362, 1470 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1463 |
| PkrI | GCNGC | 2 cut(s) | 214, 1213 |
| PleI | GAGTC | 7 cut(s) | 12, 53, 163, 205, 442, 721, 1419 |
| PpsI | GAGTC | 7 cut(s) | 12, 53, 163, 205, 442, 721, 1419 |
| PsiI | TTATAA | 1 cut(s) | 900 |
| Psp6I | CCWGG | 3 cut(s) | 688, 1264, 1456 |
| PspGI | CCWGG | 3 cut(s) | 688, 1264, 1456 |
| PspN4I | GGNNCC | 1 cut(s) | 630 |
| PspPI | GGNCC | 3 cut(s) | 21, 515, 638 |
| PsuI | RGATCY | 2 cut(s) | 798, 923 |
| RsaI | GTAC | 3 cut(s) | 41, 845, 1441 |
| RsaNI | GTAC | 3 cut(s) | 40, 844, 1440 |
| RseI | CAYNNNNRTG | 1 cut(s) | 483 |
| Rsr2I | CGGWCCG | 1 cut(s) | 21 |
| RsrII | CGGWCCG | 1 cut(s) | 21 |
| SaqAI | TTAA | 4 cut(s) | 342, 483, 603, 698 |
| SatI | GCNGC | 2 cut(s) | 213, 1212 |
| Sau3AI | GATC | 8 cut(s) | 412, 652, 672, 766, 798, 923, 1172, 1268 |
| Sau96I | GGNCC | 3 cut(s) | 21, 515, 638 |
| SchI | GAGTC | 7 cut(s) | 13, 53, 163, 206, 442, 722, 1420 |
| ScrFI | CCNGG | 4 cut(s) | 690, 1266, 1315, 1458 |
| SfaNI | GCATC | 1 cut(s) | 584 |
| SfcI | CTRYAG | 1 cut(s) | 1200 |
| SinI | GGWCC | 1 cut(s) | 21 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 483 |
| SmlI | CTYRAG | 2 cut(s) | 642, 1013 |
| SmoI | CTYRAG | 2 cut(s) | 642, 1013 |
| Sse9I | AATT | 9 cut(s) | 184, 258, 581, 600, 807, 951, 960, 1038, 1418 |
| SsiI | CCGC | 4 cut(s) | 204, 212, 1142, 1443 |
| SspMI | CTAG | 2 cut(s) | 111, 152 |
| StyD4I | CCNGG | 4 cut(s) | 688, 1264, 1313, 1456 |
| StyI | CCWWGG | 2 cut(s) | 143, 1368 |
| TaaI | ACNGT | 7 cut(s) | 44, 50, 265, 833, 947, 1348, 1481 |
| TaiI | ACGT | 3 cut(s) | 412, 1209, 1230 |
| TaqI | TCGA | 7 cut(s) | 52, 195, 244, 716, 769, 884, 1053 |
| TasI | AATT | 9 cut(s) | 184, 258, 581, 600, 807, 951, 960, 1038, 1418 |
| TatI | WGTACW | 1 cut(s) | 843 |
| TauI | GCSGC | 1 cut(s) | 215 |
| TfiI | GAWTC | 4 cut(s) | 29, 137, 1362, 1470 |
| Tru1I | TTAA | 4 cut(s) | 342, 483, 603, 698 |
| Tru9I | TTAA | 4 cut(s) | 342, 483, 603, 698 |
| TscAI | CASTG | 1 cut(s) | 1278 |
| TseFI | GTSAC | 4 cut(s) | 44, 56, 509, 1070 |
| TseI | GCWGC | 1 cut(s) | 1211 |
| Tsp45I | GTSAC | 4 cut(s) | 44, 56, 509, 1070 |
| TspDTI | ATGAA | 4 cut(s) | 69, 150, 416, 579 |
| TspRI | CASTG | 1 cut(s) | 1278 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1463 |
| VpaK11BI | GGWCC | 1 cut(s) | 21 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1455 |
| XapI | RAATTY | 3 cut(s) | 184, 581, 1038 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 547 |
| XspI | CTAG | 2 cut(s) | 111, 152 |