Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004596

Physical Location & Seq

Genomic Coordinates Reverse (-)

59830603 .. 59839001

Gene Structure 8399 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019997

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGAGCCGCTACGACAGCCGCTCCGGCGACCCCACTTCCTACCGTGACCGGAGAAGTGATTCGGGCTTTGGTGGGGCGACCGGCTACGGTGGTTCAGCCCGGTCTTCATCAAGCAGGAAGGATTATGAAGGGGCTGAGTCGCCGAGGAAGTTGGATTTGGATGGCTTGACACCTTTTGAGAAGAATTTCTATGTTGAGTCACCTGAAGTGGAGGGAATGACGGAGAGGGAGGTTGAGGAGTATAGGAAACGGAGGGAAATTACTGTTGAAGGCCGCGATGTTCCAAAGCCCATCAAGAGCTTCCGTGACATTGGGTTTCCGGAGTATGTCATGCAAGAAATCACAAAAGCTGGATTTGTTGAACCTACTCCAATTCAAGCTCAAGGATGGCCAATGGCTTTGAAGGGACGTGATCTTATTGGTATTGCTGAAACAGGATCAGGAAAGACATTAGCTTACCTGCTGCCTGCAATTGTTCATGTCAATGCCCAGCCAATTTTATCCCCTGGAGACGGCCCGATAGTATTAGTTTTAGCTCCTACCCGTGAACTTGCCGTTCAAATCCAACAAGAGTCTACTAAATTTGGTGCATCTTCGAAAATTAAAAGCACATGCATCTATGGTGGAGTTCCGAAGGGACCTCAAGTTCGTGATCTGCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGGTTGATTGATATGTTAGAGTCGCATAATACAAACTTGCGAAGGGTCACATATCTTGTGTTGGATGAGGCTGATCGGATGCTAGACATGGGGTTTGAGCCTCAGATACGAAAGATTGTTTCACAGATTCGCCCAGACCGTCAAACATTATACTGGAGTGCTACATGGCCGAAGGAGGTTGAACAACTGGCGAGGCAGTTCCTTTACAATGCATACAAAGTAATAATAGGTTCTCCAGATCTGAAAGCCAACCACTCAATTCGCCAAATTGTGGACATAATTACTGAAAATCAGAAATATAACAAATTGGTAAAGTTGCTGGAGGATATCATGGATGGCAGCAGAATACTGATATTCATGGATACTAAGAAAGGTTGCGATCAGATCACTCGGCAGCTTCGCATGGATGGTTGGCCCGCCCTCTCCATTCATGGAGACAAAAGTCAAGCAGAAAGGGATTGGGTCCTCTCTGAGTTTAAAGCTGGCAAAAGCCCCATAATGACTGCAACAGATGTTGCTGCTCGTGGTCTAGATGTGAAGGATGTGAAATATGTAATTAATTATGATTTTCCGGGATCCCTTGAGGATTATGTTCATCGCATTGGCCGAACTGGAAGAGCTGGGGCAAAAGGAACAGCGTACACATTCTTTACAGCTGCTAATGCTAGATTTGCAAAGGAACTGATTAGCTTACTTGAAGAAGCCGGACAGAAGGTCAGTCCTGATTTGGCAGCAATGGGGCGTGGTGCTCCTCCTCCCCCTTCAGGTCATGGGGGTTTTCGAGATCGTGGTAGGGGTTATGGTGGTGGTCGTCCGTGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

506

Amino Acids

56.04

Weight (kDa)

8.94

Isoelectric Point (pI)

38.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	123 - 293	3.9e-50	DEAD/DEAH box helicase
ResIII	PF04851	142 - 286	6.2e-06	Type III restriction enzyme, res subunit
Helicase_C	PF00271	330 - 439	8.4e-32	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55150 AT1G55150
fragaria_vesca	FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220
malus_domestica	MD09G1194200.v1.1 MD17G1174700.v1.1
prunus_persica	Prupe.3G019300_v2.0.a1 Prupe.3G019300_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1
pyrus_communis	pycom09g11070
rosa_chinensis	RchiOBHm_Chr2g0142931
rosa_laevigata	RLG00000019997
rosa_multiflora	Rmu_sc0028648.1_g000001
rosa_roxburghii	Rroxscaffold_2G00102220 Rroxscaffold_2G00103260
rosa_rugosa	Rorug02G0377000 Rorug02G0377100 Rorug02G0377200
rosa_samantha	Rh2AG430000 Rh2BG439000 Rh2CG362000 Rh2CG415500 Rh2DG449000
rosa_wichuraiana	Rw2G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	468
AccB7I	CCANNNNNTGG	1 cut(s)	964
AccBSI	CCGCTC	1 cut(s)	21
AccI	GTMKAC	1 cut(s)	575
AccII	CGCG	1 cut(s)	276
AccIII	TCCGGA	1 cut(s)	319
AciI	CCGC	4 cut(s)	7, 19, 274, 1110
AclWI	GGATC	3 cut(s)	445, 1263, 1276
AcoI	YGGCCR	3 cut(s)	389, 860, 1297
AcsI	RAATTY	2 cut(s)	184, 581
AcuI	CTGAAG	2 cut(s)	225, 1440
AfaI	GTAC	1 cut(s)	1334
AfiI	CCNNNNNNNGG	3 cut(s)	512, 964, 1457
AgsI	TTSAA	8 cut(s)	269, 362, 377, 403, 560, 671, 875, 1391
AhdI	GACNNNNNGTC	1 cut(s)	1406
AjiI	CACGTC	1 cut(s)	410
AjnI	CCWGG	1 cut(s)	505
AjuI	GAANNNNNNNTTGG	2 cut(s)	140, 172
AloI	GAACNNNNNNTCC	2 cut(s)	630, 662
Alw21I	GWGCWC	1 cut(s)	1444
Alw26I	GTCTC	2 cut(s)	504, 1122
AlwI	GGATC	3 cut(s)	445, 1263, 1276
Aor13HI	TCCGGA	1 cut(s)	319
AoxI	GGCC	6 cut(s)	271, 389, 514, 860, 1106, 1297
ApeKI	GCWGC	6 cut(s)	463, 1032, 1087, 1211, 1349, 1424
ApoI	RAATTY	2 cut(s)	184, 581
ArsI	GACNNNNNNTTYG	4 cut(s)	630, 662, 770, 802
AseI	ATTAAT	1 cut(s)	1251
Asp700I	GAANNNNTTC	2 cut(s)	58, 185
AspS9I	GGNCC	4 cut(s)	515, 638, 1107, 1156
AsuC2I	CCSGG	3 cut(s)	100, 690, 1266
AsuHPI	GGTGA	1 cut(s)	192
AsuII	TTCGAA	1 cut(s)	596
AvaII	GGWCC	2 cut(s)	638, 1156
BalI	TGGCCA	1 cut(s)	391
BamHI	GGATCC	1 cut(s)	1268
BauI	CACGAG	1 cut(s)	1215
BbsI	GAAGAC	1 cut(s)	96
Bbv12I	GWGCWC	1 cut(s)	1444
BbvI	GCAGC	6 cut(s)	450, 1044, 1099, 1198, 1336, 1436
BccI	CCATC	5 cut(s)	155, 299, 381, 1022, 1094
BceAI	ACGGC	2 cut(s)	529, 539
BciT130I	CCWGG	1 cut(s)	507
BciVI	GTATCC	1 cut(s)	1048
BcnI	CCSGG	3 cut(s)	100, 690, 1266
BcoDI	GTCTC	2 cut(s)	504, 1122
BfaI	CTAG	3 cut(s)	776, 1223, 1359
BfmI	CTRYAG	1 cut(s)	656
BfuAI	ACCTGC	1 cut(s)	468
BfuI	GTATCC	1 cut(s)	1048
BglI	GCCNNNNNGGC	1 cut(s)	24
BglII	AGATCT	1 cut(s)	931
BisI	GCNGC	9 cut(s)	7, 19, 274, 464, 1033, 1088, 1212, 1350, 1425
BlsI	GCNGC	9 cut(s)	8, 20, 275, 465, 1034, 1089, 1213, 1351, 1426
Bme1390I	CCNGG	4 cut(s)	100, 507, 690, 1266
Bme18I	GGWCC	2 cut(s)	638, 1156
BmeRI	GACNNNNNGTC	1 cut(s)	1406
BmgBI	CACGTC	1 cut(s)	410
BmgT120I	GGNCC	4 cut(s)	515, 638, 1107, 1156
BmiI	GGNNCC	3 cut(s)	639, 1157, 1270
BmrFI	CCNGG	4 cut(s)	100, 507, 690, 1266
BmsI	GCATC	3 cut(s)	599, 624, 762
BoxI	GACNNNNGTC	1 cut(s)	1134
BpiI	GAAGAC	1 cut(s)	96
BpmI	CTGGAG	4 cut(s)	528, 868, 912, 1034
Bpu14I	TTCGAA	1 cut(s)	596
BpuEI	CTTGAG	3 cut(s)	366, 627, 1295
BpuMI	CCSGG	3 cut(s)	100, 690, 1266
BsaJI	CCNNGG	3 cut(s)	143, 505, 1508
BsaWI	WCCGGW	2 cut(s)	48, 319
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	3 cut(s)	512, 964, 1457
Bse118I	RCCGGY	1 cut(s)	80
Bse1I	ACTGG	3 cut(s)	851, 885, 1309
Bse3DI	GCAATG	1 cut(s)	1434
BseAI	TCCGGA	1 cut(s)	319
BseBI	CCWGG	1 cut(s)	507
BseDI	CCNNGG	3 cut(s)	143, 505, 1508
BseGI	GGATG	7 cut(s)	166, 392, 763, 777, 1033, 1105, 1240
BseLI	CCNNNNNNNGG	3 cut(s)	512, 964, 1457
BseMI	GCAATG	1 cut(s)	1434
BseMII	CTCAG	3 cut(s)	126, 809, 1155
BseNI	ACTGG	3 cut(s)	851, 885, 1309
BseRI	GAGGAG	3 cut(s)	251, 1434, 1437
BseXI	GCAGC	6 cut(s)	450, 1044, 1099, 1198, 1336, 1436
BseYI	CCCAGC	2 cut(s)	489, 1313
Bsh1236I	CGCG	1 cut(s)	276
Bsh1285I	CGRYCG	1 cut(s)	81
BshFI	GGCC	6 cut(s)	273, 391, 516, 862, 1108, 1299
BsiEI	CGRYCG	1 cut(s)	81
BsiHKAI	GWGCWC	1 cut(s)	1444
BsiSI	CCGG	8 cut(s)	24, 49, 81, 100, 320, 689, 1265, 1398
BslFI	GGGAC	2 cut(s)	420, 651
BslI	CCNNNNNNNGG	3 cut(s)	512, 964, 1457
BsmAI	GTCTC	2 cut(s)	504, 1122
BsmBI	CGTCTC	1 cut(s)	504
BsmFI	GGGAC	2 cut(s)	420, 651
BsnI	GGCC	6 cut(s)	273, 391, 516, 862, 1108, 1299
Bsp119I	TTCGAA	1 cut(s)	596
Bsp1286I	GDGCHC	1 cut(s)	1444
Bsp13I	TCCGGA	1 cut(s)	319
Bsp143I	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
BspACI	CCGC	4 cut(s)	7, 19, 274, 1110
BspANI	GGCC	6 cut(s)	273, 391, 516, 862, 1108, 1299
BspCNI	CTCAG	3 cut(s)	127, 808, 1156
BspEI	TCCGGA	1 cut(s)	319
BspFNI	CGCG	1 cut(s)	276
BspLI	GGNNCC	3 cut(s)	639, 1157, 1270
BspMAI	CTGCAG	1 cut(s)	660
BspMI	ACCTGC	1 cut(s)	468
BspPI	GGATC	3 cut(s)	445, 1263, 1276
BspQI	GCTCTTC	1 cut(s)	1303
BspT104I	TTCGAA	1 cut(s)	596
BsrBI	CCGCTC	1 cut(s)	21
BsrDI	GCAATG	1 cut(s)	1434
BsrFI	RCCGGY	1 cut(s)	80
BsrI	ACTGG	3 cut(s)	851, 885, 1309
BssAI	RCCGGY	1 cut(s)	80
BssECI	CCNNGG	3 cut(s)	143, 505, 1508
BssMI	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
BssSI	CACGAG	1 cut(s)	1215
Bst2BI	CACGAG	1 cut(s)	1215
Bst2UI	CCWGG	1 cut(s)	507
Bst4CI	ACNGT	4 cut(s)	44, 89, 265, 833
Bst6I	CTCTTC	1 cut(s)	1303
BstBI	TTCGAA	1 cut(s)	596
BstC8I	GCNNGC	3 cut(s)	468, 1110, 1177
BstDEI	CTNAG	4 cut(s)	135, 795, 1059, 1164
BstDSI	CCRYGG	1 cut(s)	1508
BstF5I	GGATG	7 cut(s)	166, 392, 763, 777, 1033, 1105, 1240
BstFNI	CGCG	1 cut(s)	276
BstKTI	GATC	9 cut(s)	415, 440, 655, 769, 934, 1075, 1080, 1271, 1480
BstMAI	GTCTC	2 cut(s)	504, 1122
BstMBI	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
BstMCI	CGRYCG	1 cut(s)	81
BstMWI	GCNNNNNNNGC	4 cut(s)	15, 24, 1355, 1364
BstNI	CCWGG	1 cut(s)	507
BstNSI	RCATGY	1 cut(s)	615
BstPAI	GACNNNNGTC	1 cut(s)	1134
BstSCI	CCNGG	4 cut(s)	98, 505, 688, 1264
BstSFI	CTRYAG	1 cut(s)	656
BstUI	CGCG	1 cut(s)	276
BstV1I	GCAGC	6 cut(s)	450, 1044, 1099, 1198, 1336, 1436
BstV2I	GAAGAC	1 cut(s)	96
BstX2I	RGATCY	2 cut(s)	931, 1268
BstYI	RGATCY	2 cut(s)	931, 1268
BsuI	GTATCC	1 cut(s)	1048
BsuRI	GGCC	6 cut(s)	273, 391, 516, 862, 1108, 1299
BtgI	CCRYGG	1 cut(s)	1508
BtgZI	GCGATG	2 cut(s)	291, 1274
BtrI	CACGTC	1 cut(s)	410
BtsCI	GGATG	7 cut(s)	166, 392, 763, 777, 1033, 1105, 1240
BveI	ACCTGC	1 cut(s)	468
Cac8I	GCNNGC	3 cut(s)	468, 1110, 1177
Cfr10I	RCCGGY	1 cut(s)	80
Cfr13I	GGNCC	4 cut(s)	515, 638, 1107, 1156
Csp6I	GTAC	1 cut(s)	1333
CviQI	GTAC	1 cut(s)	1333
DdeI	CTNAG	4 cut(s)	135, 795, 1059, 1164
DpnI	GATC	9 cut(s)	414, 439, 654, 768, 933, 1074, 1079, 1270, 1479
DpnII	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
DraI	TTTAAA	1 cut(s)	1171
DriI	GACNNNNNGTC	1 cut(s)	1406
EaeI	YGGCCR	3 cut(s)	389, 860, 1297
Eam1104I	CTCTTC	1 cut(s)	1303
Eam1105I	GACNNNNNGTC	1 cut(s)	1406
EarI	CTCTTC	1 cut(s)	1303
Eco32I	GATATC	1 cut(s)	1021
Eco47I	GGWCC	2 cut(s)	638, 1156
Eco57I	CTGAAG	2 cut(s)	225, 1440
EcoO109I	RGGNCCY	2 cut(s)	638, 1156
EcoRII	CCWGG	1 cut(s)	505
EcoRV	GATATC	1 cut(s)	1021
EcoT22I	ATGCAT	2 cut(s)	617, 907
Esp3I	CGTCTC	1 cut(s)	504
FaqI	GGGAC	2 cut(s)	420, 651
FauI	CCCGC	1 cut(s)	1117
FblI	GTMKAC	1 cut(s)	575
Fnu4HI	GCNGC	9 cut(s)	7, 19, 274, 464, 1033, 1088, 1212, 1350, 1425
FokI	GGATG	7 cut(s)	173, 399, 770, 784, 1040, 1112, 1247
Fsp4HI	GCNGC	9 cut(s)	7, 19, 274, 464, 1033, 1088, 1212, 1350, 1425
FspBI	CTAG	3 cut(s)	776, 1223, 1359
GluI	GCNGC	9 cut(s)	7, 19, 274, 464, 1033, 1088, 1212, 1350, 1425
GsaI	CCCAGC	2 cut(s)	493, 1317
GsuI	CTGGAG	4 cut(s)	528, 868, 912, 1034
HaeIII	GGCC	6 cut(s)	273, 391, 516, 862, 1108, 1299
HapII	CCGG	8 cut(s)	24, 49, 81, 100, 320, 689, 1265, 1398
HinfI	GANTC	6 cut(s)	59, 137, 197, 572, 713, 820
HpaII	CCGG	8 cut(s)	24, 49, 81, 100, 320, 689, 1265, 1398
HphI	GGTGA	1 cut(s)	192
Hpy166II	GTNNAC	4 cut(s)	548, 576, 967, 1335
Hpy188I	TCNGA	7 cut(s)	633, 771, 798, 936, 987, 1077, 1165
Hpy188III	TCNNGA	8 cut(s)	295, 320, 441, 650, 929, 1223, 1415, 1475
Hpy8I	GTNNAC	4 cut(s)	548, 576, 967, 1335
HpyCH4III	ACNGT	4 cut(s)	44, 89, 265, 833
HpyCH4IV	ACGT	1 cut(s)	409
HpyCH4V	TGCA	8 cut(s)	334, 470, 590, 615, 658, 905, 1199, 1367
HpyF10VI	GCNNNNNNNGC	4 cut(s)	15, 24, 1355, 1364
HpyF3I	CTNAG	4 cut(s)	135, 795, 1059, 1164
HpySE526I	ACGT	1 cut(s)	409
Kpn2I	TCCGGA	1 cut(s)	319
Kzo9I	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
LguI	GCTCTTC	1 cut(s)	1303
LmnI	GCTCC	3 cut(s)	26, 541, 1447
Lsp1109I	GCAGC	6 cut(s)	450, 1044, 1099, 1198, 1336, 1436
LweI	GCATC	3 cut(s)	599, 624, 762
MaeI	CTAG	3 cut(s)	776, 1223, 1359
MaeII	ACGT	1 cut(s)	409
MaeIII	GTNAC	4 cut(s)	44, 198, 305, 739
MalI	GATC	9 cut(s)	414, 439, 654, 768, 933, 1074, 1079, 1270, 1479
MbiI	CCGCTC	1 cut(s)	21
MboI	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
MboII	GAAGA	5 cut(s)	96, 193, 585, 1320, 1403
MfeI	CAATTG	1 cut(s)	471
MflI	RGATCY	2 cut(s)	931, 1268
MhlI	GDGCHC	1 cut(s)	1444
MlsI	TGGCCA	1 cut(s)	391
MluNI	TGGCCA	1 cut(s)	391
MlyI	GAGTC	4 cut(s)	146, 206, 581, 722
MmeI	TCCRAC	3 cut(s)	132, 589, 735
Mox20I	TGGCCA	1 cut(s)	391
Mph1103I	ATGCAT	2 cut(s)	617, 907
MroI	TCCGGA	1 cut(s)	319
MroXI	GAANNNNTTC	2 cut(s)	58, 185
MscI	TGGCCA	1 cut(s)	391
MseI	TTAA	3 cut(s)	603, 1170, 1251
MslI	CAYNNNNRTG	1 cut(s)	483
Msp20I	TGGCCA	1 cut(s)	391
MspA1I	CMGCKG	1 cut(s)	1349
MspI	CCGG	8 cut(s)	24, 49, 81, 100, 320, 689, 1265, 1398
MspR9I	CCNGG	4 cut(s)	100, 507, 690, 1266
MunI	CAATTG	1 cut(s)	471
MvaI	CCWGG	1 cut(s)	507
MvnI	CGCG	1 cut(s)	276
MwoI	GCNNNNNNNGC	4 cut(s)	15, 24, 1355, 1364
NciI	CCSGG	3 cut(s)	100, 690, 1266
NdeII	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
NlaIV	GGNNCC	3 cut(s)	639, 1157, 1270
NmeAIII	GCCGAG	2 cut(s)	168, 1063
NmuCI	GTSAC	4 cut(s)	44, 198, 305, 739
NsiI	ATGCAT	2 cut(s)	617, 907
NspI	RCATGY	1 cut(s)	615
NspV	TTCGAA	1 cut(s)	596
PciSI	GCTCTTC	1 cut(s)	1303
PcsI	WCGNNNNNNNCGW	2 cut(s)	829, 1297
PdmI	GAANNNNTTC	2 cut(s)	58, 185
PfeI	GAWTC	2 cut(s)	59, 820
PflMI	CCANNNNNTGG	1 cut(s)	964
PfoI	TCCNGGA	1 cut(s)	1264
PkrI	GCNGC	9 cut(s)	8, 20, 275, 465, 1034, 1089, 1213, 1351, 1426
PleI	GAGTC	4 cut(s)	145, 205, 580, 721
PpsI	GAGTC	4 cut(s)	145, 205, 580, 721
PpuMI	RGGWCCY	2 cut(s)	638, 1156
PshAI	GACNNNNGTC	1 cut(s)	1134
PshBI	ATTAAT	1 cut(s)	1251
Psp5II	RGGWCCY	2 cut(s)	638, 1156
Psp6I	CCWGG	1 cut(s)	505
PspFI	CCCAGC	2 cut(s)	489, 1313
PspGI	CCWGG	1 cut(s)	505
PspN4I	GGNNCC	3 cut(s)	639, 1157, 1270
PspPI	GGNCC	4 cut(s)	515, 638, 1107, 1156
PspPPI	RGGWCCY	2 cut(s)	638, 1156
PstI	CTGCAG	1 cut(s)	660
PsuI	RGATCY	2 cut(s)	931, 1268
PvuII	CAGCTG	1 cut(s)	1349
RsaI	GTAC	1 cut(s)	1334
RsaNI	GTAC	1 cut(s)	1333
RseI	CAYNNNNRTG	1 cut(s)	483
SapI	GCTCTTC	1 cut(s)	1303
SaqAI	TTAA	3 cut(s)	603, 1170, 1251
SatI	GCNGC	9 cut(s)	7, 19, 274, 464, 1033, 1088, 1212, 1350, 1425
Sau3AI	GATC	9 cut(s)	412, 437, 652, 766, 931, 1072, 1077, 1268, 1477
Sau96I	GGNCC	4 cut(s)	515, 638, 1107, 1156
SchI	GAGTC	4 cut(s)	146, 206, 581, 722
ScrFI	CCNGG	4 cut(s)	100, 507, 690, 1266
SduI	GDGCHC	1 cut(s)	1444
SfaNI	GCATC	3 cut(s)	599, 624, 762
SfcI	CTRYAG	1 cut(s)	656
SfuI	TTCGAA	1 cut(s)	596
SinI	GGWCC	2 cut(s)	638, 1156
SmiMI	CAYNNNNRTG	1 cut(s)	483
SmlI	CTYRAG	3 cut(s)	381, 642, 1274
SmoI	CTYRAG	3 cut(s)	381, 642, 1274
SsiI	CCGC	4 cut(s)	7, 19, 274, 1110
SspMI	CTAG	3 cut(s)	776, 1223, 1359
StyD4I	CCNGG	4 cut(s)	98, 505, 688, 1264
TaaI	ACNGT	4 cut(s)	44, 89, 265, 833
TaiI	ACGT	1 cut(s)	412
TaqI	TCGA	2 cut(s)	596, 1474
TauI	GCSGC	3 cut(s)	9, 21, 276
TfiI	GAWTC	2 cut(s)	59, 820
Tru1I	TTAA	3 cut(s)	603, 1170, 1251
Tru9I	TTAA	3 cut(s)	603, 1170, 1251
TseFI	GTSAC	4 cut(s)	44, 198, 305, 739
TseI	GCWGC	6 cut(s)	463, 1032, 1087, 1211, 1349, 1424
Tsp45I	GTSAC	4 cut(s)	44, 198, 305, 739
TspDTI	ATGAA	6 cut(s)	96, 141, 467, 1039, 1112, 1277
TspGWI	ACGGA	4 cut(s)	236, 265, 293, 1497
Van91I	CCANNNNNTGG	1 cut(s)	964
VpaK11BI	GGWCC	2 cut(s)	638, 1156
VspI	ATTAAT	1 cut(s)	1251
XapI	RAATTY	2 cut(s)	184, 581
XbaI	TCTAGA	1 cut(s)	1222
XceI	RCATGY	1 cut(s)	615
XmiI	GTMKAC	1 cut(s)	575
XmnI	GAANNNNTTC	2 cut(s)	58, 185
XspI	CTAG	3 cut(s)	776, 1223, 1359
Zsp2I	ATGCAT	2 cut(s)	617, 907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.