Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004596

Physical Location & Seq

Genomic Coordinates Forward (+)

3575102 .. 3580905

Gene Structure 5804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G050700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGAGCCGCTATGACAGCCGCTCCGGCGACCCCACTTCGTACCGTGACCGGAAAAGTGATTCGGGGTTTGGTGTGACCGGCTACGGTGGCTCAGCACGGTCTTCGTCAAGCAAGAAGGATTGTGATGGTGCTGAGTCACCGAGGAAATTTGATTTGGATGGATTGACACCTTTCGAGAAGAATTTCTATGTTGAGTCACCTGAAGTGGAAAGAATGTCGGAGAAGGAGGTTGAGGACTATAGGCAACGGAGGGAAATTACTATTGAAGGCCGTGATGTTCCAAAGCCGATCAAGAGTTTCCGTGACACTGGGTTTCCAGAATACGTTTTGGAAGAAGTTACAAAGGCTGGATTTGTTGAACCTACACCAATTCAAGCTCAAGGATGGCCAATGGCTTTGAAGGGTCGTGATCTCATTGGTATTGCTGAAACAGGATCTGGGAAGACGCTAGCCTACCTGTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATTCTATCTCCTGGAGATGGCCCAATAGTATTAGTTTTAGCTCCAACCCGTGAGCTCGCTGTTCAAATCCAACAAGAGGCTACTAAATTTGGCTCGTCTTCAAAAATTAAAAGCACATGCATATATGGCGGGGTTCCAAAGGGACCTCAAGTTCGTGATCTGCAGAGGGGAGTTGAGATTGTAATTGCTACACCTGGGAGGTTGATTGATATGATAGAGTCGCATCATACCAACTTGCGAAGGGTCACATACCTTGTGTTGGATGAGGCCGATCGGATGCTAGACATGGGGTTTGACCCACAGATACGGAAAATTGTTTCTCAGATTCGCCCAGACCGTCAAACATTATACTGGAGTGCTACCTGGCCAAAGGAGGTTGAACAACTGGCGAGGCAGTTCCTTTACAACCCATACAAAGTGATAATAGGTTCTCCAGATTTGAAAGCTAACCATGCGATCCGCCAAATTGTTGACATCATTACAGAAAATCAGAAATATAACAAACTGGTAAAGTTGCTTGAGGACATCATGGATGGCAGCAGAATACTGATATTCATGGATACTAAGAAAGGATGTGATCAGATCACTCGGCAGCTCCGCATGGATGGTTGGCCTGCTCTCTCAATTCATGGAGACAAAAGTCAAGCAGAAAGGGATTGGGTCCTCTCTGAGTTTAAAGCCGGCAAGAGCCCCATAATGACCGCAACAGATGTTGCTGCTCGTGGTCTAGATGTGAAGGATGTGAAATTTGTTATTAACTATGATTTTCCTGGATCCCTTGAGGATTATGTTCACCGCATTGGCCGAACTGGAAGAGCTGGGGCAAAAGGAACAGCATACACGTTTTTCACAGCTGCTAATGCTAGGTTCGCAAAGGAACTTATTGCCTTGCTCGAGGAAGCTGGACAGAAGGTCAGTCCTGAATTGGCAGCAATGGGCCGCGGTGCACCTCCTCCCCCTTCAGGTCATGGCGGTTTTCGAGATCGCGGTCGGGGTTACGGTGGAGGTCGTCCTTGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

505

Amino Acids

55.99

Weight (kDa)

8.79

Isoelectric Point (pI)

38.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55150 AT1G55150
fragaria_vesca	FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220
malus_domestica	MD09G1194200.v1.1 MD17G1174700.v1.1
prunus_persica	Prupe.3G019300_v2.0.a1 Prupe.3G019300_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1
pyrus_communis	pycom09g11070
rosa_chinensis	RchiOBHm_Chr2g0142931
rosa_laevigata	RLG00000019997
rosa_multiflora	Rmu_sc0028648.1_g000001
rosa_roxburghii	Rroxscaffold_2G00102220 Rroxscaffold_2G00103260
rosa_rugosa	Rorug02G0377000 Rorug02G0377100 Rorug02G0377200
rosa_samantha	Rh2AG430000 Rh2BG439000 Rh2CG362000 Rh2CG415500 Rh2DG449000
rosa_wichuraiana	Rw2G035130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	21
AccII	CGCG	2 cut(s)	1434, 1479
AclWI	GGATC	4 cut(s)	442, 943, 1260, 1273
AcoI	YGGCCR	3 cut(s)	386, 857, 1294
AcsI	RAATTY	4 cut(s)	146, 181, 578, 1238
AcuI	CTGAAG	2 cut(s)	222, 1437
AfaI	GTAC	1 cut(s)	41
AfiI	CCNNNNNNNGG	4 cut(s)	509, 568, 751, 1454
AflIII	ACRYGT	1 cut(s)	1332
AgsI	TTSAA	8 cut(s)	266, 359, 374, 400, 557, 594, 872, 934
AhdI	GACNNNNNGTC	1 cut(s)	1403
AjnI	CCWGG	4 cut(s)	502, 685, 854, 1261
AjuI	GAANNNNNNNTTGG	2 cut(s)	137, 169
AloI	GAACNNNNNNTCC	2 cut(s)	627, 659
AluBI	AGCT	8 cut(s)	377, 533, 547, 938, 1087, 1310, 1346, 1394
AluI	AGCT	8 cut(s)	377, 533, 547, 938, 1087, 1310, 1346, 1394
Alw21I	GWGCWC	2 cut(s)	549, 1441
Alw26I	GTCTC	1 cut(s)	1119
Alw44I	GTGCAC	1 cut(s)	1437
AlwI	GGATC	4 cut(s)	442, 943, 1260, 1273
AlwNI	CAGNNNCTG	1 cut(s)	437
Ama87I	CYCGRG	1 cut(s)	1385
AoxI	GGCC	8 cut(s)	268, 386, 511, 759, 857, 1103, 1294, 1429
ApaLI	GTGCAC	1 cut(s)	1437
ApeKI	GCWGC	5 cut(s)	1029, 1084, 1208, 1346, 1421
ApoI	RAATTY	4 cut(s)	146, 181, 578, 1238
ArsI	GACNNNNNNTTYG	4 cut(s)	627, 659, 767, 799
Asp700I	GAANNNNTTC	1 cut(s)	182
AspS9I	GGNCC	4 cut(s)	512, 635, 1153, 1429
AsuHPI	GGTGA	3 cut(s)	129, 189, 1277
AsuNHI	GCTAGC	1 cut(s)	448
AvaI	CYCGRG	1 cut(s)	1385
AvaII	GGWCC	2 cut(s)	635, 1153
BaeGI	GKGCMC	1 cut(s)	1441
BalI	TGGCCA	2 cut(s)	388, 859
BamHI	GGATCC	1 cut(s)	1265
BanII	GRGCYC	2 cut(s)	549, 1184
BauI	CACGAG	1 cut(s)	1212
BbsI	GAAGAC	3 cut(s)	93, 449, 582
Bbv12I	GWGCWC	2 cut(s)	549, 1441
BbvI	GCAGC	5 cut(s)	1041, 1096, 1195, 1333, 1433
BccI	CCATC	6 cut(s)	119, 152, 378, 503, 1019, 1091
BceAI	ACGGC	1 cut(s)	255
BcgI	CGANNNNNNTGC	2 cut(s)	84, 118
BciT130I	CCWGG	4 cut(s)	504, 687, 856, 1263
BciVI	GTATCC	1 cut(s)	1045
BclI	TGATCA	1 cut(s)	1069
BcoDI	GTCTC	1 cut(s)	1119
BfaI	CTAG	4 cut(s)	449, 773, 1220, 1356
BfmI	CTRYAG	2 cut(s)	238, 653
BfuI	GTATCC	1 cut(s)	1045
BglI	GCCNNNNNGGC	1 cut(s)	24
BisI	GCNGC	8 cut(s)	7, 19, 1030, 1085, 1209, 1347, 1422, 1432
BlpI	GCTNAGC	1 cut(s)	91
BlsI	GCNGC	8 cut(s)	8, 20, 1031, 1086, 1210, 1348, 1423, 1433
Bme1390I	CCNGG	4 cut(s)	504, 687, 856, 1263
Bme18I	GGWCC	2 cut(s)	635, 1153
BmeRI	GACNNNNNGTC	1 cut(s)	1403
BmeT110I	CYCGRG	1 cut(s)	1385
BmgT120I	GGNCC	4 cut(s)	512, 635, 1153, 1429
BmiI	GGNNCC	4 cut(s)	627, 636, 1154, 1267
BmrFI	CCNGG	4 cut(s)	504, 687, 856, 1263
BmrI	ACTGGG	1 cut(s)	318
BmsI	GCATC	2 cut(s)	724, 759
BmtI	GCTAGC	1 cut(s)	452
BmuI	ACTGGG	1 cut(s)	318
BoxI	GACNNNNGTC	1 cut(s)	1131
BpiI	GAAGAC	3 cut(s)	93, 449, 582
BpmI	CTGGAG	3 cut(s)	525, 865, 909
Bpu1102I	GCTNAGC	1 cut(s)	91
BpuEI	CTTGAG	4 cut(s)	363, 624, 1031, 1292
BsaJI	CCNNGG	4 cut(s)	140, 686, 1432, 1505
BsaWI	WCCGGW	1 cut(s)	48
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	4 cut(s)	509, 568, 751, 1454
Bse118I	RCCGGY	2 cut(s)	77, 1172
Bse1I	ACTGG	5 cut(s)	313, 848, 882, 1002, 1306
Bse3DI	GCAATG	1 cut(s)	1431
BseBI	CCWGG	4 cut(s)	504, 687, 856, 1263
BseDI	CCNNGG	4 cut(s)	140, 686, 1432, 1505
BseGI	GGATG	8 cut(s)	163, 389, 760, 774, 1030, 1070, 1102, 1237
BseLI	CCNNNNNNNGG	4 cut(s)	509, 568, 751, 1454
BseMI	GCAATG	1 cut(s)	1431
BseMII	CTCAG	4 cut(s)	105, 123, 827, 1152
BseNI	ACTGG	5 cut(s)	313, 848, 882, 1002, 1306
BseRI	GAGGAG	1 cut(s)	1434
BseSI	GKGCMC	1 cut(s)	1441
BseXI	GCAGC	5 cut(s)	1041, 1096, 1195, 1333, 1433
BseYI	CCCAGC	2 cut(s)	486, 1310
Bsh1236I	CGCG	2 cut(s)	1434, 1479
Bsh1285I	CGRYCG	2 cut(s)	766, 1483
BshFI	GGCC	8 cut(s)	270, 388, 513, 761, 859, 1105, 1296, 1431
BsiEI	CGRYCG	2 cut(s)	766, 1483
BsiHKAI	GWGCWC	2 cut(s)	549, 1441
BsiHKCI	CYCGRG	1 cut(s)	1385
BsiSI	CCGG	4 cut(s)	24, 49, 78, 1173
BslFI	GGGAC	1 cut(s)	648
BslI	CCNNNNNNNGG	4 cut(s)	509, 568, 751, 1454
BsmAI	GTCTC	1 cut(s)	1119
BsmFI	GGGAC	1 cut(s)	648
BsnI	GGCC	8 cut(s)	270, 388, 513, 761, 859, 1105, 1296, 1431
BsoBI	CYCGRG	1 cut(s)	1385
Bsp1286I	GDGCHC	3 cut(s)	549, 1184, 1441
Bsp1720I	GCTNAGC	1 cut(s)	91
BspANI	GGCC	8 cut(s)	270, 388, 513, 761, 859, 1105, 1296, 1431
BspCNI	CTCAG	4 cut(s)	104, 124, 826, 1153
BspFNI	CGCG	2 cut(s)	1434, 1479
BspLI	GGNNCC	4 cut(s)	627, 636, 1154, 1267
BspMAI	CTGCAG	1 cut(s)	657
BspOI	GCTAGC	1 cut(s)	452
BspPI	GGATC	4 cut(s)	442, 943, 1260, 1273
BspQI	GCTCTTC	1 cut(s)	1300
BsrBI	CCGCTC	1 cut(s)	21
BsrDI	GCAATG	1 cut(s)	1431
BsrFI	RCCGGY	2 cut(s)	77, 1172
BsrI	ACTGG	5 cut(s)	313, 848, 882, 1002, 1306
BssAI	RCCGGY	2 cut(s)	77, 1172
BssECI	CCNNGG	4 cut(s)	140, 686, 1432, 1505
BssSI	CACGAG	1 cut(s)	1212
BssT1I	CCWWGG	1 cut(s)	1505
Bst2BI	CACGAG	1 cut(s)	1212
Bst2UI	CCWGG	4 cut(s)	504, 687, 856, 1263
Bst4CI	ACNGT	5 cut(s)	44, 86, 99, 830, 1493
Bst6I	CTCTTC	1 cut(s)	1300
BstC8I	GCNNGC	5 cut(s)	450, 465, 549, 1107, 1174
BstDEI	CTNAG	5 cut(s)	91, 132, 813, 1056, 1161
BstDSI	CCRYGG	1 cut(s)	1432
BstF5I	GGATG	8 cut(s)	163, 389, 760, 774, 1030, 1070, 1102, 1237
BstFNI	CGCG	2 cut(s)	1434, 1479
BstMAI	GTCTC	1 cut(s)	1119
BstMCI	CGRYCG	2 cut(s)	766, 1483
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 24, 87, 618, 944, 1352, 1361
BstNI	CCWGG	4 cut(s)	504, 687, 856, 1263
BstNSI	RCATGY	1 cut(s)	612
BstPAI	GACNNNNGTC	1 cut(s)	1131
BstSCI	CCNGG	4 cut(s)	502, 685, 854, 1261
BstSFI	CTRYAG	2 cut(s)	238, 653
BstSLI	GKGCMC	1 cut(s)	1441
BstUI	CGCG	2 cut(s)	1434, 1479
BstV1I	GCAGC	5 cut(s)	1041, 1096, 1195, 1333, 1433
BstV2I	GAAGAC	3 cut(s)	93, 449, 582
BstX2I	RGATCY	2 cut(s)	434, 1265
BstYI	RGATCY	2 cut(s)	434, 1265
BsuI	GTATCC	1 cut(s)	1045
BsuRI	GGCC	8 cut(s)	270, 388, 513, 761, 859, 1105, 1296, 1431
BtgI	CCRYGG	1 cut(s)	1432
BtsCI	GGATG	8 cut(s)	163, 389, 760, 774, 1030, 1070, 1102, 1237
BtsIMutI	CAGTG	1 cut(s)	306
Cac8I	GCNNGC	5 cut(s)	450, 465, 549, 1107, 1174
CaiI	CAGNNNCTG	1 cut(s)	437
Cfr10I	RCCGGY	2 cut(s)	77, 1172
Cfr13I	GGNCC	4 cut(s)	512, 635, 1153, 1429
Cfr42I	CCGCGG	1 cut(s)	1435
CseI	GACGC	1 cut(s)	454
Csp6I	GTAC	1 cut(s)	40
CviAII	CATG	9 cut(s)	476, 609, 778, 944, 1021, 1048, 1093, 1121, 1460
CviQI	GTAC	1 cut(s)	40
DdeI	CTNAG	5 cut(s)	91, 132, 813, 1056, 1161
DraI	TTTAAA	1 cut(s)	1168
DriI	GACNNNNNGTC	1 cut(s)	1403
EaeI	YGGCCR	3 cut(s)	386, 857, 1294
Eam1104I	CTCTTC	1 cut(s)	1300
Eam1105I	GACNNNNNGTC	1 cut(s)	1403
EarI	CTCTTC	1 cut(s)	1300
EciI	GGCGGA	1 cut(s)	941
Ecl136II	GAGCTC	1 cut(s)	547
Eco130I	CCWWGG	1 cut(s)	1505
Eco24I	GRGCYC	2 cut(s)	549, 1184
Eco47I	GGWCC	2 cut(s)	635, 1153
Eco53kI	GAGCTC	1 cut(s)	547
Eco57I	CTGAAG	2 cut(s)	222, 1437
Eco88I	CYCGRG	1 cut(s)	1385
EcoICRI	GAGCTC	1 cut(s)	547
EcoO109I	RGGNCCY	2 cut(s)	635, 1153
EcoRII	CCWGG	4 cut(s)	502, 685, 854, 1261
EcoT14I	CCWWGG	1 cut(s)	1505
EcoT22I	ATGCAT	1 cut(s)	614
EcoT38I	GRGCYC	2 cut(s)	549, 1184
ErhI	CCWWGG	1 cut(s)	1505
FaeI	CATG	9 cut(s)	479, 612, 781, 947, 1024, 1051, 1096, 1124, 1463
FaqI	GGGAC	1 cut(s)	648
FatI	CATG	9 cut(s)	475, 608, 777, 943, 1020, 1047, 1092, 1120, 1459
FauI	CCCGC	1 cut(s)	614
FbaI	TGATCA	1 cut(s)	1069
Fnu4HI	GCNGC	8 cut(s)	7, 19, 1030, 1085, 1209, 1347, 1422, 1432
FokI	GGATG	8 cut(s)	170, 396, 767, 781, 1037, 1077, 1109, 1244
FriOI	GRGCYC	2 cut(s)	549, 1184
Fsp4HI	GCNGC	8 cut(s)	7, 19, 1030, 1085, 1209, 1347, 1422, 1432
FspBI	CTAG	4 cut(s)	449, 773, 1220, 1356
GluI	GCNGC	8 cut(s)	7, 19, 1030, 1085, 1209, 1347, 1422, 1432
GsaI	CCCAGC	2 cut(s)	490, 1314
GsuI	CTGGAG	3 cut(s)	525, 865, 909
HaeIII	GGCC	8 cut(s)	270, 388, 513, 761, 859, 1105, 1296, 1431
HapII	CCGG	4 cut(s)	24, 49, 78, 1173
HgaI	GACGC	1 cut(s)	454
Hin1II	CATG	9 cut(s)	479, 612, 781, 947, 1024, 1051, 1096, 1124, 1463
HincII	GTYRAC	1 cut(s)	964
HindII	GTYRAC	1 cut(s)	964
HinfI	GANTC	5 cut(s)	59, 134, 194, 710, 817
HpaII	CCGG	4 cut(s)	24, 49, 78, 1173
HphI	GGTGA	3 cut(s)	129, 189, 1277
Hpy166II	GTNNAC	3 cut(s)	964, 1285, 1439
Hpy188I	TCNGA	6 cut(s)	220, 768, 816, 984, 1074, 1162
Hpy188III	TCNNGA	9 cut(s)	175, 292, 317, 407, 647, 926, 1220, 1412, 1472
Hpy8I	GTNNAC	3 cut(s)	964, 1285, 1439
HpyAV	CCTTC	8 cut(s)	109, 217, 260, 394, 726, 1222, 1396, 1461
HpyCH4III	ACNGT	5 cut(s)	44, 86, 99, 830, 1493
HpyCH4IV	ACGT	2 cut(s)	324, 1334
HpyCH4V	TGCA	4 cut(s)	467, 612, 655, 1439
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 24, 87, 618, 944, 1352, 1361
HpyF3I	CTNAG	5 cut(s)	91, 132, 813, 1056, 1161
HpySE526I	ACGT	2 cut(s)	324, 1334
Hsp92II	CATG	9 cut(s)	479, 612, 781, 947, 1024, 1051, 1096, 1124, 1463
KroI	GCCGGC	1 cut(s)	1172
KroNI	GCCGGC	1 cut(s)	1174
Ksp22I	TGATCA	1 cut(s)	1069
KspI	CCGCGG	1 cut(s)	1435
LguI	GCTCTTC	1 cut(s)	1300
LmnI	GCTCC	3 cut(s)	26, 538, 1092
Lsp1109I	GCAGC	5 cut(s)	1041, 1096, 1195, 1333, 1433
LweI	GCATC	2 cut(s)	724, 759
MaeI	CTAG	4 cut(s)	449, 773, 1220, 1356
MaeII	ACGT	2 cut(s)	324, 1334
MaeIII	GTNAC	8 cut(s)	44, 73, 135, 195, 302, 337, 736, 1487
MbiI	CCGCTC	1 cut(s)	21
MboII	GAAGA	6 cut(s)	93, 190, 344, 454, 582, 1317
MfeI	CAATTG	1 cut(s)	468
MflI	RGATCY	2 cut(s)	434, 1265
MhlI	GDGCHC	3 cut(s)	549, 1184, 1441
MlsI	TGGCCA	2 cut(s)	388, 859
MluNI	TGGCCA	2 cut(s)	388, 859
MlyI	GAGTC	3 cut(s)	143, 203, 719
MmeI	TCCRAC	4 cut(s)	198, 560, 586, 732
Mox20I	TGGCCA	2 cut(s)	388, 859
Mph1103I	ATGCAT	1 cut(s)	614
MroNI	GCCGGC	1 cut(s)	1172
MroXI	GAANNNNTTC	1 cut(s)	182
MscI	TGGCCA	2 cut(s)	388, 859
MseI	TTAA	3 cut(s)	600, 1167, 1248
MslI	CAYNNNNRTG	1 cut(s)	480
Msp20I	TGGCCA	2 cut(s)	388, 859
MspA1I	CMGCKG	2 cut(s)	1346, 1434
MspI	CCGG	4 cut(s)	24, 49, 78, 1173
MspR9I	CCNGG	4 cut(s)	504, 687, 856, 1263
MunI	CAATTG	1 cut(s)	468
MvaI	CCWGG	4 cut(s)	504, 687, 856, 1263
MvnI	CGCG	2 cut(s)	1434, 1479
MwoI	GCNNNNNNNGC	7 cut(s)	15, 24, 87, 618, 944, 1352, 1361
NaeI	GCCGGC	1 cut(s)	1174
NgoMIV	GCCGGC	1 cut(s)	1172
NheI	GCTAGC	1 cut(s)	448
NlaIII	CATG	9 cut(s)	479, 612, 781, 947, 1024, 1051, 1096, 1124, 1463
NlaIV	GGNNCC	4 cut(s)	627, 636, 1154, 1267
NmeAIII	GCCGAG	1 cut(s)	1060
NmuCI	GTSAC	6 cut(s)	44, 73, 135, 195, 302, 736
NsiI	ATGCAT	1 cut(s)	614
NspI	RCATGY	1 cut(s)	612
PaeR7I	CTCGAG	1 cut(s)	1385
PciSI	GCTCTTC	1 cut(s)	1300
PcsI	WCGNNNNNNNCGW	1 cut(s)	826
PdiI	GCCGGC	1 cut(s)	1174
PdmI	GAANNNNTTC	1 cut(s)	182
PfeI	GAWTC	2 cut(s)	59, 817
PfoI	TCCNGGA	2 cut(s)	502, 1261
PkrI	GCNGC	8 cut(s)	8, 20, 1031, 1086, 1210, 1348, 1423, 1433
Ple19I	CGATCG	1 cut(s)	766
PleI	GAGTC	3 cut(s)	142, 202, 718
PpsI	GAGTC	3 cut(s)	142, 202, 718
PpuMI	RGGWCCY	2 cut(s)	635, 1153
PshAI	GACNNNNGTC	1 cut(s)	1131
Psp124BI	GAGCTC	1 cut(s)	549
Psp5II	RGGWCCY	2 cut(s)	635, 1153
Psp6I	CCWGG	4 cut(s)	502, 685, 854, 1261
PspFI	CCCAGC	2 cut(s)	486, 1310
PspGI	CCWGG	4 cut(s)	502, 685, 854, 1261
PspN4I	GGNNCC	4 cut(s)	627, 636, 1154, 1267
PspPI	GGNCC	4 cut(s)	512, 635, 1153, 1429
PspPPI	RGGWCCY	2 cut(s)	635, 1153
PspXI	VCTCGAGB	1 cut(s)	1385
PstI	CTGCAG	1 cut(s)	657
PstNI	CAGNNNCTG	1 cut(s)	437
PsuI	RGATCY	2 cut(s)	434, 1265
PvuI	CGATCG	1 cut(s)	766
PvuII	CAGCTG	1 cut(s)	1346
RsaI	GTAC	1 cut(s)	41
RsaNI	GTAC	1 cut(s)	40
RseI	CAYNNNNRTG	1 cut(s)	480
SacI	GAGCTC	1 cut(s)	549
SacII	CCGCGG	1 cut(s)	1435
SapI	GCTCTTC	1 cut(s)	1300
SaqAI	TTAA	3 cut(s)	600, 1167, 1248
SatI	GCNGC	8 cut(s)	7, 19, 1030, 1085, 1209, 1347, 1422, 1432
Sau96I	GGNCC	4 cut(s)	512, 635, 1153, 1429
SchI	GAGTC	3 cut(s)	143, 203, 719
ScrFI	CCNGG	4 cut(s)	504, 687, 856, 1263
SduI	GDGCHC	3 cut(s)	549, 1184, 1441
SfaNI	GCATC	2 cut(s)	724, 759
SfcI	CTRYAG	2 cut(s)	238, 653
Sfr274I	CTCGAG	1 cut(s)	1385
Sfr303I	CCGCGG	1 cut(s)	1435
SgrBI	CCGCGG	1 cut(s)	1435
SinI	GGWCC	2 cut(s)	635, 1153
SlaI	CTCGAG	1 cut(s)	1385
SmiMI	CAYNNNNRTG	1 cut(s)	480
SmlI	CTYRAG	5 cut(s)	378, 639, 1010, 1271, 1385
SmoI	CTYRAG	5 cut(s)	378, 639, 1010, 1271, 1385
SspMI	CTAG	4 cut(s)	449, 773, 1220, 1356
SstI	GAGCTC	1 cut(s)	549
StyD4I	CCNGG	4 cut(s)	502, 685, 854, 1261
StyI	CCWWGG	1 cut(s)	1505
TaaI	ACNGT	5 cut(s)	44, 86, 99, 830, 1493
TaiI	ACGT	2 cut(s)	327, 1337
TaqI	TCGA	3 cut(s)	174, 1386, 1471
TauI	GCSGC	3 cut(s)	9, 21, 1434
TfiI	GAWTC	2 cut(s)	59, 817
Tru1I	TTAA	3 cut(s)	600, 1167, 1248
Tru9I	TTAA	3 cut(s)	600, 1167, 1248
TscAI	CASTG	1 cut(s)	313
TseFI	GTSAC	6 cut(s)	44, 73, 135, 195, 302, 736
TseI	GCWGC	5 cut(s)	1029, 1084, 1208, 1346, 1421
Tsp45I	GTSAC	6 cut(s)	44, 73, 135, 195, 302, 736
TspDTI	ATGAA	2 cut(s)	1036, 1109
TspGWI	ACGGA	3 cut(s)	262, 290, 814
TspRI	CASTG	1 cut(s)	313
VneI	GTGCAC	1 cut(s)	1437
VpaK11BI	GGWCC	2 cut(s)	635, 1153
XapI	RAATTY	4 cut(s)	146, 181, 578, 1238
XbaI	TCTAGA	1 cut(s)	1219
XceI	RCATGY	1 cut(s)	612
XhoI	CTCGAG	1 cut(s)	1385
XmnI	GAANNNNTTC	1 cut(s)	182
XspI	CTAG	4 cut(s)	449, 773, 1220, 1356
Zsp2I	ATGCAT	1 cut(s)	614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.