DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55150 AT1G55150 |
| fragaria_vesca | FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 FvH4_6g33220 |
| malus_domestica | MD09G1194200.v1.1 MD17G1174700.v1.1 |
| prunus_persica | Prupe.3G019300_v2.0.a1 Prupe.3G019300_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1 Prupe.3G050700_v2.0.a1 |
| pyrus_communis | pycom09g11070 |
| rosa_chinensis | RchiOBHm_Chr2g0142931 |
| rosa_laevigata | RLG00000019997 |
| rosa_multiflora | Rmu_sc0028648.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00102220 Rroxscaffold_2G00103260 |
| rosa_rugosa | Rorug02G0377000 Rorug02G0377100 Rorug02G0377200 |
| rosa_samantha | Rh2AG430000 Rh2BG439000 Rh2CG362000 Rh2CG415500 Rh2DG449000 |
| rosa_wichuraiana | Rw2G035130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 58 |
| AclWI | GGATC | 1 cut(s) | 196 |
| AcsI | RAATTY | 1 cut(s) | 160 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 90 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| AlwI | GGATC | 1 cut(s) | 196 |
| ApoI | RAATTY | 1 cut(s) | 160 |
| AseI | ATTAAT | 1 cut(s) | 194 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 161 |
| AsuHPI | GGTGA | 1 cut(s) | 168 |
| BbsI | GAAGAC | 1 cut(s) | 72 |
| BccI | CCATC | 2 cut(s) | 98, 131 |
| BpiI | GAAGAC | 1 cut(s) | 72 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 90 |
| BseGI | GGATG | 1 cut(s) | 142 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 90 |
| BseMII | CTCAG | 1 cut(s) | 102 |
| BseRI | GAGGAG | 1 cut(s) | 133 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 90 |
| Bsp143I | GATC | 1 cut(s) | 201 |
| BspACI | CCGC | 1 cut(s) | 58 |
| BspCNI | CTCAG | 1 cut(s) | 103 |
| BspPI | GGATC | 1 cut(s) | 196 |
| BssMI | GATC | 1 cut(s) | 201 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstDEI | CTNAG | 1 cut(s) | 111 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 88 |
| BstF5I | GGATG | 1 cut(s) | 142 |
| BstKTI | GATC | 1 cut(s) | 204 |
| BstMBI | GATC | 1 cut(s) | 201 |
| BstV2I | GAAGAC | 1 cut(s) | 72 |
| BtsCI | GGATG | 1 cut(s) | 142 |
| CviJI | RGCY | 3 cut(s) | 42, 74, 110 |
| CviKI_1 | RGCY | 3 cut(s) | 42, 74, 110 |
| DdeI | CTNAG | 1 cut(s) | 111 |
| DpnI | GATC | 1 cut(s) | 203 |
| DpnII | GATC | 1 cut(s) | 201 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 88 |
| FaiI | YATR | 2 cut(s) | 102, 168 |
| FauI | CCCGC | 1 cut(s) | 65 |
| FokI | GGATG | 1 cut(s) | 149 |
| HinfI | GANTC | 2 cut(s) | 35, 173 |
| HphI | GGTGA | 1 cut(s) | 168 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 1 cut(s) | 111 |
| Kzo9I | GATC | 1 cut(s) | 201 |
| LpnPI | CCDG | 3 cut(s) | 29, 76, 192 |
| MaeIII | GTNAC | 1 cut(s) | 174 |
| MalI | GATC | 1 cut(s) | 203 |
| MboI | GATC | 1 cut(s) | 201 |
| MboII | GAAGA | 2 cut(s) | 72, 169 |
| MluCI | AATT | 2 cut(s) | 29, 160 |
| MlyI | GAGTC | 1 cut(s) | 182 |
| MmeI | TCCRAC | 1 cut(s) | 108 |
| MnlI | CCTC | 3 cut(s) | 94, 111, 181 |
| MroXI | GAANNNNTTC | 1 cut(s) | 161 |
| MseI | TTAA | 2 cut(s) | 194, 208 |
| NdeII | GATC | 1 cut(s) | 201 |
| NmuCI | GTSAC | 1 cut(s) | 174 |
| PdmI | GAANNNNTTC | 1 cut(s) | 161 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| PleI | GAGTC | 1 cut(s) | 181 |
| PpsI | GAGTC | 1 cut(s) | 181 |
| PshBI | ATTAAT | 1 cut(s) | 194 |
| SaqAI | TTAA | 2 cut(s) | 194, 208 |
| Sau3AI | GATC | 1 cut(s) | 201 |
| SchI | GAGTC | 1 cut(s) | 182 |
| SetI | ASST | 3 cut(s) | 9, 76, 151 |
| SgeI | CNNG | 9 cut(s) | 17, 28, 32, 51, 69, 87, 99, 103, 191 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 2 cut(s) | 29, 160 |
| SsiI | CCGC | 1 cut(s) | 58 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaqII | GACCGA | 1 cut(s) | 66 |
| TasI | AATT | 2 cut(s) | 29, 160 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| Tru1I | TTAA | 2 cut(s) | 194, 208 |
| Tru9I | TTAA | 2 cut(s) | 194, 208 |
| TseFI | GTSAC | 1 cut(s) | 174 |
| Tsp45I | GTSAC | 1 cut(s) | 174 |
| VspI | ATTAAT | 1 cut(s) | 194 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 88 |
| XapI | RAATTY | 1 cut(s) | 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 161 |