Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008402

Physical Location & Seq

Genomic Coordinates Forward (+)

20895582 .. 20898868

Gene Structure 3287 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G55870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGCGCCGGCACAAGCGATGGCCTTTGAGGTCTCTTGTCTGCAGCTTCAGCTCCTCTGCGGCGGAGACAGTTACTACTTCAACGGCAGCTTCAGCGACGGCGGCTTTTCCGTTGAAGCATGTGACAAGGTCGAACTTCGAGACGACGCTGAATGATCTACGCTCACTCGTAAAGGCTGCAGATTTCGTGGCGATTGACCTTGAGATGACTGGCGTGACAAGCGCTCCGTGGCGAGACTCCTTAGAGTTCGACCGCTACGACGTCAGATACCTCAAAGTCAAAGACTCCGCCGAGAAATTCGCCGTCGTTCAGTTTGGTGTCTGTCCCTTTCGTTGGGATTCTCGTACTCAGTCATTCGTGTCCTACCCGCACAATTTCTTTGTATTTCCTCGTCAAGAACTCACATTTGATCCACCAGCTCATGAATTTCTCTGTCAGACTACATCAATGGATTTTCTTGCCAAGTATCAGTTTGATTTCAACACCTGCATACATGAAGGAATATCTTATTTGTCCAGACGAGAAGAGGAAGAGGCAAGTAAGCGTTTGAAAATGCTACACGGCGAGGACGGAATTGATTCATCGGGTGAAACTGAAGAGTTAAAGTTGGTGCGATTGGCAGATGTTCTTTTCGCTGCAAGGATGGAGAAATTGCTGAATGAATGGCGGTCTGGCCTGTTACATGGTGGGAATGCGTCCTCTGAGTTTCCGAGGATTTCAAATGGTTCAAACCAGAGTATGGAAACTGTGTTTCACCATATGCGTCCTGCTCTCAGTCTGAAGGGTTTCACTTCTCATCAGCTCAGAGTTCTTAACTCGGTTTTAAGAAAGCATTTTGGAGATCTTGTGTACATACATTCAAATGATAAAAGTTCTTCTTCACGAGACATTGTTGTGTATACTGATTCAGATTCCGACAAGGAAAACCTCATGAAGGAGGCAAAGGACGAACGCAAGAGATTGGCAGAAAGAAAAATACAATCTGCAATCGGGTTCCGTCAAGTGATTGATCTGCTTGCTTCAGAGAAAAAGCTGATCGTTGGTCACAATTGTTTCCTCGATATTGCACATGTATACAGCAAATTTGTGGGTCCTCTTCCTTCAACAGCTGAGAAATTCGTGGCCTCCATTAACAGTCACTTTCCTTATATTGTTGACACCAAAATACTCTTAAACGTGAATCCAATGTTGCATCAGCGGATGAAAAAGTCCAGTACATCACTGTCTTCCGCGTTTTCCTCGTTATGTCCGCAAATCGAGTTTTCTTCAAGAAGCTCTGACTCGTTTCTTCAGCAGCGTGTCAATATTGACGTTGAAATAGACAACGTTAGGTGTTCTAACTGGAATGCAGGAGGAAAACACGAAGCCGGTTATGATGCTTTCATGACAGGTTGCATCTTTGCGCAGGCATGCAATCATCTCGGTTTTGACTTCAAACAGCATTCGCAGTTAGATGACTTTGCCCAGAACGAGAAACTTGAAAAGTACATCAACCGTCTTTATCTCAGCTGGACAAGAGGTGATATCATCGACCTTCGAACAGGCCATAGTAATGCAGATAACTGGCGAGTCTCAAAGTTCAAATACGAGAACATTGTCCTCATCTGGAACTTCCCACGAAAACTTAAGGCGAGAGGGATCAAAGAATGCATATGCAAAGCCTTTGGCTCTGCTTCTGTCACCTCTGTCTACCACGTGGACGACTCTGCGGTTTTTGTCCTGTTTAAGAACTCAGAACTTGTCTGGGACTTCTTAGCACTCAAGCGGCAGCTGGAGTCAAGCGACGGTCCAGTCTCAGTTCTTCACCCTTTATCCAAGATCCTTGAAGGAGGAAACACTGGAGCTGCAGACTACGAAGCATACAAAGAGATTTGCAGCTCACACGTCTCAGAGGTCATGTTCTCTGACCAAGCTGAAACAGTTGGTGTCAAATCAAGAACAAGACCCAACGCACAATGCGAGACTGAGACAAGAGAGGAGAACACAGTCACTGTGACTCACAAAGCATCGGATTTGATTGATGCGTTTTTGGCCAATAGAGTTGAAGTCGAAACTGCTACGAGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0010033 GO:0014070 GO:0033993 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

CAF1

Protein Analysis

689

Amino Acids

78.01

Weight (kDa)

6.67

Isoelectric Point (pI)

36.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1	PF04857	41 - 467	2.5e-103	CAF1 family ribonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55870 AT1G55870 AT1G55870 AT1G55870
fragaria_vesca	FvH4_3g42970 FvH4_3g42970
malus_domestica	MD03G1026800.v1.1 MD11G1030900.v1.1
prunus_persica	Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1
pyrus_communis	pycom03g02190 pycom11g02610
rosa_chinensis	RchiOBHm_Chr5g0077021
rosa_laevigata	RLG00000036642
rosa_roxburghii	Rroxscaffold_1G00005120
rosa_rugosa	Rorug05G0450400
rosa_samantha	Rh5AG505000 Rh5BG526700 Rh5CG550500 Rh5DG538900
rosa_wichuraiana	Rw5G047140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	494
AasI	GACNNNNNNGTC	1 cut(s)	1790
AatII	GACGTC	1 cut(s)	264
Acc16I	TGCGCA	1 cut(s)	1404
Acc36I	ACCTGC	1 cut(s)	494
AccB7I	CCANNNNNTGG	1 cut(s)	739
AccI	GTMKAC	3 cut(s)	899, 1074, 1689
AccII	CGCG	1 cut(s)	1232
AclI	AACGTT	1 cut(s)	1326
AclWI	GGATC	3 cut(s)	404, 1646, 1813
AcoI	YGGCCR	1 cut(s)	2031
AcsI	RAATTY	4 cut(s)	296, 425, 1082, 1115
AcuI	CTGAAG	6 cut(s)	31, 75, 615, 800, 1005, 1274
AcvI	CACGTG	1 cut(s)	1696
AcyI	GRCGYC	1 cut(s)	261
AfaI	GTAC	4 cut(s)	346, 851, 1216, 1487
AfeI	AGCGCT	1 cut(s)	223
AfiI	CCNNNNNNNGG	3 cut(s)	333, 739, 934
AflII	CTTAAG	1 cut(s)	1625
AflIII	ACRYGT	2 cut(s)	1069, 1882
AjiI	CACGTC	1 cut(s)	1885
AlwI	GGATC	3 cut(s)	404, 1646, 1813
AlwNI	CAGNNNCTG	1 cut(s)	1991
Aor51HI	AGCGCT	1 cut(s)	223
AoxI	GGCC	5 cut(s)	20, 673, 1122, 1543, 2031
ApeKI	GCWGC	8 cut(s)	42, 86, 176, 635, 1294, 1768, 1844, 1875
ApoI	RAATTY	4 cut(s)	296, 425, 1082, 1115
Asp700I	GAANNNNTTC	2 cut(s)	577, 785
AspLEI	GCGC	3 cut(s)	6, 224, 1405
AspS9I	GGNCC	2 cut(s)	1091, 1787
AsuHPI	GGTGA	5 cut(s)	599, 746, 1532, 1672, 1796
AsuII	TTCGAA	1 cut(s)	1537
AvaII	GGWCC	2 cut(s)	1091, 1787
BalI	TGGCCA	1 cut(s)	2033
BauI	CACGAG	1 cut(s)	882
BbrPI	CACGTG	1 cut(s)	1696
BbsI	GAAGAC	1 cut(s)	1218
BbvI	GCAGC	8 cut(s)	54, 98, 163, 622, 1306, 1780, 1831, 1887
BccI	CCATC	2 cut(s)	12, 637
BceAI	ACGGC	4 cut(s)	99, 114, 287, 577
BcgI	CGANNNNNNTGC	2 cut(s)	1402, 1436
BfmI	CTRYAG	3 cut(s)	40, 177, 1845
BfoI	RGCGCY	1 cut(s)	225
BfrI	CTTAAG	1 cut(s)	1625
BfuAI	ACCTGC	1 cut(s)	494
BglII	AGATCT	1 cut(s)	841
Bme18I	GGWCC	2 cut(s)	1091, 1787
BmgBI	CACGTC	1 cut(s)	1885
BmgT120I	GGNCC	2 cut(s)	1091, 1787
BmiI	GGNNCC	2 cut(s)	995, 1092
BmsI	GCATC	5 cut(s)	1201, 1366, 1404, 2011, 2015
BpiI	GAAGAC	1 cut(s)	1218
BpmI	CTGGAG	2 cut(s)	1793, 1860
Bpu14I	TTCGAA	1 cut(s)	1537
BpuEI	CTTGAG	2 cut(s)	221, 1745
BsaAI	YACGTR	1 cut(s)	1696
BsaHI	GRCGYC	1 cut(s)	261
BsaI	GGTCTC	1 cut(s)	36
BsaJI	CCNNGG	2 cut(s)	227, 710
BsaXI	ACNNNNNCTCC	4 cut(s)	208, 238, 831, 861
Bsc4I	CCNNNNNNNGG	3 cut(s)	333, 739, 934
Bse118I	RCCGGY	2 cut(s)	6, 1367
Bse1I	ACTGG	6 cut(s)	214, 1212, 1346, 1568, 1790, 1843
BseDI	CCNNGG	2 cut(s)	227, 710
BseGI	GGATG	2 cut(s)	648, 1206
BseLI	CCNNNNNNNGG	3 cut(s)	333, 739, 934
BseNI	ACTGG	6 cut(s)	214, 1212, 1346, 1568, 1790, 1843
BseRI	GAGGAG	2 cut(s)	43, 1991
BseXI	GCAGC	8 cut(s)	54, 98, 163, 622, 1306, 1780, 1831, 1887
Bsh1236I	CGCG	1 cut(s)	1232
Bsh1285I	CGRYCG	1 cut(s)	253
BshFI	GGCC	5 cut(s)	22, 675, 1124, 1545, 2033
BsiEI	CGRYCG	1 cut(s)	253
BsiSI	CCGG	2 cut(s)	7, 1368
BslFI	GGGAC	2 cut(s)	309, 1760
BslI	CCNNNNNNNGG	3 cut(s)	333, 739, 934
BsmBI	CGTCTC	2 cut(s)	134, 1891
BsmFI	GGGAC	2 cut(s)	309, 1760
BsmI	GAATGC	4 cut(s)	697, 1351, 1441, 1652
BsnI	GGCC	5 cut(s)	22, 675, 1124, 1545, 2033
Bso31I	GGTCTC	1 cut(s)	36
Bsp119I	TTCGAA	1 cut(s)	1537
Bsp1407I	TGTACA	1 cut(s)	849
Bsp143I	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
BspANI	GGCC	5 cut(s)	22, 675, 1124, 1545, 2033
BspFNI	CGCG	1 cut(s)	1232
BspHI	TCATGA	3 cut(s)	421, 930, 1383
BspLI	GGNNCC	2 cut(s)	995, 1092
BspMAI	CTGCAG	3 cut(s)	44, 181, 1849
BspMI	ACCTGC	1 cut(s)	494
BspPI	GGATC	3 cut(s)	404, 1646, 1813
BspT104I	TTCGAA	1 cut(s)	1537
BspTI	CTTAAG	1 cut(s)	1625
BspTNI	GGTCTC	1 cut(s)	36
BsrFI	RCCGGY	2 cut(s)	6, 1367
BsrGI	TGTACA	1 cut(s)	849
BsrI	ACTGG	6 cut(s)	214, 1212, 1346, 1568, 1790, 1843
BssAI	RCCGGY	2 cut(s)	6, 1367
BssECI	CCNNGG	2 cut(s)	227, 710
BssMI	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
BssNAI	GTATAC	2 cut(s)	900, 1075
BssNI	GRCGYC	1 cut(s)	261
BssSI	CACGAG	1 cut(s)	882
Bst1107I	GTATAC	2 cut(s)	900, 1075
Bst2BI	CACGAG	1 cut(s)	882
Bst4CI	ACNGT	9 cut(s)	70, 748, 1136, 1224, 1496, 1787, 1921, 1987, 1993
Bst6I	CTCTTC	4 cut(s)	519, 525, 591, 1101
BstACI	GRCGYC	1 cut(s)	261
BstAFI	CTTAAG	1 cut(s)	1625
BstAUI	TGTACA	1 cut(s)	849
BstBAI	YACGTR	1 cut(s)	1696
BstBI	TTCGAA	1 cut(s)	1537
BstC8I	GCNNGC	4 cut(s)	8, 1017, 1407, 1411
BstDSI	CCRYGG	1 cut(s)	227
BstENI	CCTNNNNNAGG	1 cut(s)	932
BstF5I	GGATG	2 cut(s)	648, 1206
BstFNI	CGCG	1 cut(s)	1232
BstH2I	RGCGCY	1 cut(s)	225
BstHHI	GCGC	3 cut(s)	6, 224, 1405
BstKTI	GATC	7 cut(s)	157, 412, 844, 1012, 1038, 1641, 1821
BstMBI	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
BstMCI	CGRYCG	1 cut(s)	253
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 92, 101, 219, 2030
BstNSI	RCATGY	3 cut(s)	122, 1073, 1413
BstSFI	CTRYAG	3 cut(s)	40, 177, 1845
BstUI	CGCG	1 cut(s)	1232
BstV1I	GCAGC	8 cut(s)	54, 98, 163, 622, 1306, 1780, 1831, 1887
BstV2I	GAAGAC	1 cut(s)	1218
BstX2I	RGATCY	2 cut(s)	841, 1818
BstYI	RGATCY	2 cut(s)	841, 1818
BstZ17I	GTATAC	2 cut(s)	900, 1075
BsuRI	GGCC	5 cut(s)	22, 675, 1124, 1545, 2033
BtgI	CCRYGG	1 cut(s)	227
BtgZI	GCGATG	1 cut(s)	31
BtrI	CACGTC	1 cut(s)	1885
BtsCI	GGATG	2 cut(s)	648, 1206
BtsIMutI	CAGTG	3 cut(s)	1220, 1836, 1989
BveI	ACCTGC	1 cut(s)	494
Cac8I	GCNNGC	4 cut(s)	8, 1017, 1407, 1411
CaiI	CAGNNNCTG	1 cut(s)	1991
CciI	TCATGA	3 cut(s)	421, 930, 1383
CfoI	GCGC	3 cut(s)	6, 224, 1405
Cfr10I	RCCGGY	2 cut(s)	6, 1367
Cfr13I	GGNCC	2 cut(s)	1091, 1787
CseI	GACGC	3 cut(s)	154, 684, 752
Csp6I	GTAC	4 cut(s)	345, 850, 1215, 1486
CviAII	CATG	9 cut(s)	119, 422, 494, 683, 931, 1070, 1384, 1410, 1897
CviQI	GTAC	4 cut(s)	345, 850, 1215, 1486
DpnI	GATC	7 cut(s)	156, 411, 843, 1011, 1037, 1640, 1820
DpnII	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
DrdI	GACNNNNNNGTC	1 cut(s)	1790
DseDI	GACNNNNNNGTC	1 cut(s)	1790
EaeI	YGGCCR	1 cut(s)	2031
Eam1104I	CTCTTC	4 cut(s)	519, 525, 591, 1101
EarI	CTCTTC	4 cut(s)	519, 525, 591, 1101
EciI	GGCGGA	2 cut(s)	77, 277
Eco31I	GGTCTC	1 cut(s)	36
Eco32I	GATATC	1 cut(s)	1525
Eco47I	GGWCC	2 cut(s)	1091, 1787
Eco47III	AGCGCT	1 cut(s)	223
Eco57I	CTGAAG	6 cut(s)	31, 75, 615, 800, 1005, 1274
Eco72I	CACGTG	1 cut(s)	1696
EcoNI	CCTNNNNNAGG	1 cut(s)	932
EcoO109I	RGGNCCY	1 cut(s)	1091
EcoRV	GATATC	1 cut(s)	1525
EcoT22I	ATGCAT	1 cut(s)	1652
Esp3I	CGTCTC	2 cut(s)	134, 1891
FaeI	CATG	9 cut(s)	122, 425, 497, 686, 934, 1073, 1387, 1413, 1900
FalI	AAGNNNNNCTT	2 cut(s)	862, 894
FaqI	GGGAC	2 cut(s)	309, 1760
FatI	CATG	9 cut(s)	118, 421, 493, 682, 930, 1069, 1383, 1409, 1896
FauI	CCCGC	1 cut(s)	375
FauNDI	CATATG	2 cut(s)	759, 1652
FblI	GTMKAC	3 cut(s)	899, 1074, 1689
FokI	GGATG	2 cut(s)	655, 1213
FspI	TGCGCA	1 cut(s)	1404
GlaI	GCGC	3 cut(s)	5, 223, 1404
GsuI	CTGGAG	2 cut(s)	1793, 1860
HaeII	RGCGCY	1 cut(s)	225
HaeIII	GGCC	5 cut(s)	22, 675, 1124, 1545, 2033
HapII	CCGG	2 cut(s)	7, 1368
HgaI	GACGC	3 cut(s)	154, 684, 752
HhaI	GCGC	3 cut(s)	6, 224, 1405
Hin1I	GRCGYC	1 cut(s)	261
Hin1II	CATG	9 cut(s)	122, 425, 497, 686, 934, 1073, 1387, 1413, 1900
Hin6I	GCGC	3 cut(s)	4, 222, 1403
HinP1I	GCGC	3 cut(s)	4, 222, 1403
HincII	GTYRAC	1 cut(s)	1156
HindII	GTYRAC	1 cut(s)	1156
HpaII	CCGG	2 cut(s)	7, 1368
HphI	GGTGA	5 cut(s)	599, 746, 1532, 1672, 1796
Hpy166II	GTNNAC	6 cut(s)	850, 900, 1075, 1156, 1690, 1699
Hpy8I	GTNNAC	6 cut(s)	850, 900, 1075, 1156, 1690, 1699
Hpy99I	CGWCG	5 cut(s)	100, 148, 263, 308, 1787
HpyAV	CCTTC	6 cut(s)	491, 775, 928, 1110, 1544, 1820
HpyCH4III	ACNGT	9 cut(s)	70, 748, 1136, 1224, 1496, 1787, 1921, 1987, 1993
HpyCH4IV	ACGT	6 cut(s)	261, 1176, 1311, 1326, 1695, 1884
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 92, 101, 219, 2030
HpySE526I	ACGT	6 cut(s)	261, 1176, 1311, 1326, 1695, 1884
Hsp92I	GRCGYC	1 cut(s)	261
Hsp92II	CATG	9 cut(s)	122, 425, 497, 686, 934, 1073, 1387, 1413, 1900
HspAI	GCGC	3 cut(s)	4, 222, 1403
KroI	GCCGGC	1 cut(s)	6
KroNI	GCCGGC	1 cut(s)	8
Kzo9I	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
LmnI	GCTCC	3 cut(s)	56, 229, 1841
Lsp1109I	GCAGC	8 cut(s)	54, 98, 163, 622, 1306, 1780, 1831, 1887
LweI	GCATC	5 cut(s)	1201, 1366, 1404, 2011, 2015
MaeII	ACGT	6 cut(s)	261, 1176, 1311, 1326, 1695, 1884
MaeIII	GTNAC	9 cut(s)	70, 121, 214, 678, 1043, 1136, 1678, 1987, 1993
MalI	GATC	7 cut(s)	156, 411, 843, 1011, 1037, 1640, 1820
MboI	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
MfeI	CAATTG	1 cut(s)	1048
MflI	RGATCY	2 cut(s)	841, 1818
MlsI	TGGCCA	1 cut(s)	2033
MluCI	AATT	9 cut(s)	296, 373, 425, 573, 650, 1048, 1082, 1115, 2065
MluNI	TGGCCA	1 cut(s)	2033
MlyI	GAGTC	7 cut(s)	230, 278, 1274, 1578, 1697, 1784, 1990
MmeI	TCCRAC	1 cut(s)	939
Mox20I	TGGCCA	1 cut(s)	2033
Mph1103I	ATGCAT	1 cut(s)	1652
MroNI	GCCGGC	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	577, 785
MscI	TGGCCA	1 cut(s)	2033
MseI	TTAA	8 cut(s)	602, 813, 824, 1131, 1172, 1626, 1725, 2068
MslI	CAYNNNNRTG	3 cut(s)	861, 893, 1551
Msp20I	TGGCCA	1 cut(s)	2033
MspA1I	CMGCKG	4 cut(s)	1109, 1198, 1509, 1771
MspCI	CTTAAG	1 cut(s)	1625
MspI	CCGG	2 cut(s)	7, 1368
MunI	CAATTG	1 cut(s)	1048
Mva1269I	GAATGC	4 cut(s)	697, 1351, 1441, 1652
MvnI	CGCG	1 cut(s)	1232
MwoI	GCNNNNNNNGC	5 cut(s)	48, 92, 101, 219, 2030
NaeI	GCCGGC	1 cut(s)	8
NdeI	CATATG	2 cut(s)	759, 1652
NdeII	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
NgoMIV	GCCGGC	1 cut(s)	6
NlaIII	CATG	9 cut(s)	122, 425, 497, 686, 934, 1073, 1387, 1413, 1900
NlaIV	GGNNCC	2 cut(s)	995, 1092
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	7 cut(s)	121, 214, 1043, 1136, 1678, 1987, 1993
NsbI	TGCGCA	1 cut(s)	1404
NsiI	ATGCAT	1 cut(s)	1652
NspI	RCATGY	3 cut(s)	122, 1073, 1413
NspV	TTCGAA	1 cut(s)	1537
PaeI	GCATGC	1 cut(s)	1413
PagI	TCATGA	3 cut(s)	421, 930, 1383
PaqCI	CACCTGC	1 cut(s)	494
PciI	ACATGT	1 cut(s)	1069
PcsI	WCGNNNNNNNCGW	2 cut(s)	255, 1956
PctI	GAATGC	4 cut(s)	697, 1351, 1441, 1652
PdiI	GCCGGC	1 cut(s)	8
PdmI	GAANNNNTTC	2 cut(s)	577, 785
PfeI	GAWTC	5 cut(s)	338, 578, 905, 911, 1180
PflFI	GACNNNGTC	1 cut(s)	127
PflMI	CCANNNNNTGG	1 cut(s)	739
PleI	GAGTC	7 cut(s)	230, 278, 1274, 1577, 1697, 1783, 1990
PmaCI	CACGTG	1 cut(s)	1696
PmlI	CACGTG	1 cut(s)	1696
PpsI	GAGTC	7 cut(s)	230, 278, 1274, 1577, 1697, 1783, 1990
Ppu21I	YACGTR	1 cut(s)	1696
PpuMI	RGGWCCY	1 cut(s)	1091
PscI	ACATGT	1 cut(s)	1069
Psp1406I	AACGTT	1 cut(s)	1326
Psp5II	RGGWCCY	1 cut(s)	1091
PspCI	CACGTG	1 cut(s)	1696
PspN4I	GGNNCC	2 cut(s)	995, 1092
PspPI	GGNCC	2 cut(s)	1091, 1787
PspPPI	RGGWCCY	1 cut(s)	1091
PstI	CTGCAG	3 cut(s)	44, 181, 1849
PstNI	CAGNNNCTG	1 cut(s)	1991
PsuI	RGATCY	2 cut(s)	841, 1818
PsyI	GACNNNGTC	1 cut(s)	127
PvuII	CAGCTG	3 cut(s)	1109, 1509, 1771
RsaI	GTAC	4 cut(s)	346, 851, 1216, 1487
RsaNI	GTAC	4 cut(s)	345, 850, 1215, 1486
RseI	CAYNNNNRTG	3 cut(s)	861, 893, 1551
SaqAI	TTAA	8 cut(s)	602, 813, 824, 1131, 1172, 1626, 1725, 2068
Sau3AI	GATC	7 cut(s)	154, 409, 841, 1009, 1035, 1638, 1818
Sau96I	GGNCC	2 cut(s)	1091, 1787
SchI	GAGTC	7 cut(s)	230, 278, 1274, 1578, 1697, 1784, 1990
SfaNI	GCATC	5 cut(s)	1201, 1366, 1404, 2011, 2015
SfcI	CTRYAG	3 cut(s)	40, 177, 1845
SfuI	TTCGAA	1 cut(s)	1537
SinI	GGWCC	2 cut(s)	1091, 1787
SmiMI	CAYNNNNRTG	3 cut(s)	861, 893, 1551
SmlI	CTYRAG	3 cut(s)	200, 1625, 1760
SmoI	CTYRAG	3 cut(s)	200, 1625, 1760
SphI	GCATGC	1 cut(s)	1413
Sse9I	AATT	9 cut(s)	296, 373, 425, 573, 650, 1048, 1082, 1115, 2065
SspI	AATATT	1 cut(s)	1306
TaaI	ACNGT	9 cut(s)	70, 748, 1136, 1224, 1496, 1787, 1921, 1987, 1993
TaiI	ACGT	6 cut(s)	264, 1179, 1314, 1329, 1698, 1887
TaqI	TCGA	8 cut(s)	131, 138, 249, 1059, 1257, 1530, 1537, 2049
TasI	AATT	9 cut(s)	296, 373, 425, 573, 650, 1048, 1082, 1115, 2065
TatI	WGTACW	3 cut(s)	849, 1214, 1485
TauI	GCSGC	3 cut(s)	62, 104, 1768
TfiI	GAWTC	5 cut(s)	338, 578, 905, 911, 1180
Tru1I	TTAA	8 cut(s)	602, 813, 824, 1131, 1172, 1626, 1725, 2068
Tru9I	TTAA	8 cut(s)	602, 813, 824, 1131, 1172, 1626, 1725, 2068
TscAI	CASTG	3 cut(s)	1227, 1843, 1996
TseFI	GTSAC	7 cut(s)	121, 214, 1043, 1136, 1678, 1987, 1993
TseI	GCWGC	8 cut(s)	42, 86, 176, 635, 1294, 1768, 1844, 1875
Tsp45I	GTSAC	7 cut(s)	121, 214, 1043, 1136, 1678, 1987, 1993
TspDTI	ATGAA	7 cut(s)	438, 510, 570, 675, 947, 1217, 1372
TspGWI	ACGGA	4 cut(s)	99, 216, 585, 986
TspRI	CASTG	3 cut(s)	1227, 1843, 1996
Tth111I	GACNNNGTC	1 cut(s)	127
Van91I	CCANNNNNTGG	1 cut(s)	739
Vha464I	CTTAAG	1 cut(s)	1625
VpaK11BI	GGWCC	2 cut(s)	1091, 1787
XagI	CCTNNNNNAGG	1 cut(s)	932
XapI	RAATTY	4 cut(s)	296, 425, 1082, 1115
XceI	RCATGY	3 cut(s)	122, 1073, 1413
XmiI	GTMKAC	3 cut(s)	899, 1074, 1689
XmnI	GAANNNNTTC	2 cut(s)	577, 785
ZraI	GACGTC	1 cut(s)	262
Zsp2I	ATGCAT	1 cut(s)	1652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.