Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0008402

Physical Location & Seq

Genomic Coordinates Reverse (-)

1672387 .. 1676390

Gene Structure 4004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g02190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGAACACTCACCGCCCGGCGAGGGCACTGTCACGTGCTATATCACGTGCCATATCCCACTCCTCCTCCTCCTCGTCATTACAACAGCAATCCTCGACCTTTCCTCTGAAAAACGTGACCAAATCGAACTTCGAGCCGGCTCTGGCCGACCTGCGCCGCCATGTCGCCACCGCAGACTTCGTGGCCATCGATCTCGAGATGACCGGAATCTCCAGTGCGCCATGGCGCGACTCTCTGGAGTTCGACCGCGCCGACGTTTGCTACCTTAAGGTCAAGGACTCGGCCGAGAAGTTCGCCGTGCTTCAGTTTGGCGTTTGCCCCTTCCGATGGGACTCCTCCAAGCGCTCCTTCATTGCTCATCCGCACAATTTCTACATTTTTCCGCGTCAAGAACTTCCACTTGCAGGCCCACCATATGAGTTTCTATGCCAGACTACATCGATCGATTTCTTAGCTAAATACCAGTTTGATTTTAATGTCTGCATACATGAAGGAATATCTTATTTATCCAGAGAGCAGGAAAGTGAGGCGCTGAGACGTTTGAGTTTGGCATATGATGATGAGTTATTGGCTAGATGTTCAAACTTGAAGGAACCAATGCACATGCCAGTGGTCAAGATGGCTGACACTCTCTTCGCTGAACGGATGAAGAACTCATTCACTGAATGGCGTGATGGTTTGTTAAGAAGTAGTAAGGGAGGATTCCAGTTTCAGGGAGACTCAAATGACTCCCAACAGTTACAAACCATTTTCTTCAAGTTGCGTCCAGCTCTTAGTCTGAGGAGATTCACTTCTCATCAGCTTAAGTTGATTCAAATGGTCATTACAAGGCATTTCCAAGATCTCTTTTATGTTCGGATAAATGGTGAAAAGTCCTGTCAACAGCAACTAGTTGTGCGGACAGAGTCCAAGGATGACAGAGAGTTACTTCTGAAAGAGGTGAAGGATGAACATCGTAGGGAAGCAGAGGTGAAAGTTCAAGCTGCAGTTGGGTTTCGTCATGTTATTGACCTTCTTTCCTCAGAACAAAAGTTGATTGTTGGTCACAATTGCTTTCTTGATATTGCCCATGTATATAGCAAATTCCTCGGCCCTCTTCCTTCGACTGCTGAAGAATTTGTCTCTACTGTTAACAAGTACTTTCCACACGTCATTGACACCAAAGTACTATTAAACACGGATAATGTGCTCCAACAACGGATGAAGAAATCCCGAACATCACTTTCGTCAGCATTTGCCTTGTTATGCCCACAAATTGCTCTTGGGAAGAAAAGCACTGATTCGGAAGTCCAAATGTGTGTCAAAGTGGAAGTTCAGGTGGATGATTTGAGGTCCTCCAACTGGAATTCTGGAGCCAAACATGAAGCCGGATATGATGCTTTTATGACAGGCTGCGTCTTTGCTCAGACATGCAGTCATCTCGGAATTGATTTTCAGGCCTGTTCGTCATCTGAAAAGTTGGCCCACAATGAGAAGCTCCAGAAGCAGATCAACCATCTATACCTCAGTTGGAGTAATGGAGACATTATTGATTTAACCACTGGTAAGAAGAATGCAATGTCTTCGGGGTCTAATAACCACAAAAGGAGGTACTCGCAGATTATGTCTGAGAACGTTGCTTTAATCTGGGGATTCCCATCAAAACTCAAGGCACGAGACATCAGGGAGTGCATTTCAAAAGTCTTTGGCTCAACCTCTGTTACGTCTGTCTTCCACTTGGATGAAACTGCGGTATTCGTTCAGTTTAGCAAGGAAAAATTTGTCTCCGAATTTCTGGCTTTGAAGGAAACATTAGAGAGAAGTGACGGTCCAGTCTCAGTTTTGCACCCCCTCGCGGGACTTTTGGAGGGTGGAAGCACCCGAGCTGCTAATTATGAAACTTACAAGGAAATCTGCAGTTCACCCAGCGCAAAGGGCTTTTTAGCGGATCAGGCTGAGGCAGTTGGTATTAAATGGAAAACTAAATTGGTTGAATCCAAGGAAGCATCAGAGACCCTAAAACGGGAGAGCTTCGATGAAAATAGTGAAGTGAATCCTGCTTCAAAGACCGAAAAATTGAGAAGAAGTACCACAGACACCGCAGAAAATGATCCGTTCTGTGGGCGTCGCGCACAATACAAGGTCATAGATACCTTAATTGCTTCTGAAGGCGATCAAATGAGAACTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0010033 GO:0014070 GO:0033993 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

CAF1

Protein Analysis

724

Amino Acids

81.7

Weight (kDa)

8.22

Isoelectric Point (pI)

47.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1	PF04857	39 - 467	2.2e-101	CAF1 family ribonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55870 AT1G55870 AT1G55870 AT1G55870
fragaria_vesca	FvH4_3g42970 FvH4_3g42970
malus_domestica	MD03G1026800.v1.1 MD11G1030900.v1.1
prunus_persica	Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1
pyrus_communis	pycom03g02190 pycom11g02610
rosa_chinensis	RchiOBHm_Chr5g0077021
rosa_laevigata	RLG00000036642
rosa_roxburghii	Rroxscaffold_1G00005120
rosa_rugosa	Rorug05G0450400
rosa_samantha	Rh5AG505000 Rh5BG526700 Rh5CG550500 Rh5DG538900
rosa_wichuraiana	Rw5G047140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1811
Acc36I	ACCTGC	1 cut(s)	159
AccII	CGCG	5 cut(s)	228, 249, 385, 1835, 2109
AclI	AACGTT	1 cut(s)	1614
AclWI	GGATC	2 cut(s)	1935, 2084
AcoI	YGGCCR	3 cut(s)	144, 183, 282
AcsI	RAATTY	5 cut(s)	1082, 1115, 1345, 1757, 1769
AcuI	CTGAAG	3 cut(s)	287, 1131, 2166
AcvI	CACGTG	2 cut(s)	35, 47
AcyI	GRCGYC	1 cut(s)	2104
AfaI	GTAC	4 cut(s)	1139, 1167, 1592, 2068
AfeI	AGCGCT	1 cut(s)	344
AflII	CTTAAG	2 cut(s)	266, 803
AflIII	ACRYGT	1 cut(s)	1147
AgsI	TTSAA	9 cut(s)	582, 589, 757, 815, 980, 1677, 1783, 1973, 2043
AhdI	GACNNNNNGTC	1 cut(s)	1413
AhlI	ACTAGT	1 cut(s)	889
AjiI	CACGTC	1 cut(s)	1150
AjuI	GAANNNNNNNTTGG	6 cut(s)	113, 145, 332, 364, 1949, 1981
AluBI	AGCT	7 cut(s)	455, 770, 802, 983, 1477, 1865, 2010
AluI	AGCT	7 cut(s)	455, 770, 802, 983, 1477, 1865, 2010
Alw21I	GWGCWC	1 cut(s)	1191
Alw26I	GTCTC	8 cut(s)	529, 711, 1126, 1515, 1650, 1768, 1819, 1985
AlwI	GGATC	2 cut(s)	1935, 2084
Ama87I	CYCGRG	2 cut(s)	194, 1860
Aor51HI	AGCGCT	1 cut(s)	344
AoxI	GGCC	7 cut(s)	144, 183, 282, 406, 1090, 1437, 1461
ApeKI	GCWGC	3 cut(s)	983, 1392, 1865
ApoI	RAATTY	5 cut(s)	1082, 1115, 1345, 1757, 1769
ArsI	GACNNNNNNTTYG	2 cut(s)	617, 649
Asp700I	GAANNNNTTC	1 cut(s)	656
AspLEI	GCGC	8 cut(s)	156, 220, 228, 251, 345, 532, 1910, 2111
AspS9I	GGNCC	5 cut(s)	407, 1091, 1332, 1462, 1808
AsuC2I	CCSGG	1 cut(s)	17
AsuHPI	GGTGA	4 cut(s)	878, 952, 982, 1893
AvaI	CYCGRG	2 cut(s)	194, 1860
AvaII	GGWCC	2 cut(s)	1332, 1808
BaeGI	GKGCMC	1 cut(s)	28
BalI	TGGCCA	1 cut(s)	185
BauI	CACGAG	1 cut(s)	1653
BbrPI	CACGTG	2 cut(s)	35, 47
BbsI	GAAGAC	2 cut(s)	1554, 1702
Bbv12I	GWGCWC	1 cut(s)	1191
BbvCI	CCTCAGC	1 cut(s)	1935
BbvI	GCAGC	3 cut(s)	970, 1379, 1852
BccI	CCATC	6 cut(s)	194, 321, 613, 668, 1503, 1645
BceAI	ACGGC	1 cut(s)	281
BcgI	CGANNNNNNTGC	6 cut(s)	1069, 1103, 1402, 1436, 1545, 1579
BcnI	CCSGG	1 cut(s)	17
BcoDI	GTCTC	8 cut(s)	529, 711, 1126, 1515, 1650, 1768, 1819, 1985
BcuI	ACTAGT	1 cut(s)	889
BfaI	CTAG	2 cut(s)	573, 890
BfmI	CTRYAG	2 cut(s)	984, 1894
BfoI	RGCGCY	2 cut(s)	346, 533
BfrI	CTTAAG	2 cut(s)	266, 803
BfuAI	ACCTGC	1 cut(s)	159
BglII	AGATCT	1 cut(s)	841
BisI	GCNGC	4 cut(s)	157, 984, 1393, 1866
BlsI	GCNGC	4 cut(s)	158, 985, 1394, 1867
BmcAI	AGTACT	2 cut(s)	1139, 1167
Bme1390I	CCNGG	1 cut(s)	17
Bme18I	GGWCC	2 cut(s)	1332, 1808
BmeRI	GACNNNNNGTC	1 cut(s)	1413
BmeT110I	CYCGRG	2 cut(s)	194, 1860
BmgBI	CACGTC	1 cut(s)	1150
BmgT120I	GGNCC	5 cut(s)	407, 1091, 1332, 1462, 1808
BmiI	GGNNCC	2 cut(s)	594, 1354
BmrFI	CCNGG	1 cut(s)	17
BmsI	GCATC	2 cut(s)	1366, 1994
BpiI	GAAGAC	2 cut(s)	1554, 1702
BpmI	CTGGAG	4 cut(s)	196, 257, 1371, 1463
Bpu10I	CCTNAGC	1 cut(s)	1935
BpuEI	CTTGAG	1 cut(s)	1631
BpuMI	CCSGG	1 cut(s)	17
Bsa29I	ATCGAT	3 cut(s)	189, 440, 444
BsaAI	YACGTR	2 cut(s)	35, 47
BsaBI	GATNNNNATC	2 cut(s)	951, 1636
BsaHI	GRCGYC	1 cut(s)	2104
BsaI	GGTCTC	1 cut(s)	1985
BsaJI	CCNNGG	4 cut(s)	221, 909, 1087, 1977
BsaWI	WCCGGW	1 cut(s)	203
BsaXI	ACNNNNNCTCC	2 cut(s)	50, 80
Bse118I	RCCGGY	1 cut(s)	136
Bse1I	ACTGG	7 cut(s)	213, 463, 608, 706, 1346, 1546, 1811
Bse3DI	GCAATG	2 cut(s)	351, 1563
Bse8I	GATNNNNATC	2 cut(s)	951, 1636
BseCI	ATCGAT	3 cut(s)	189, 440, 444
BseDI	CCNNGG	4 cut(s)	221, 909, 1087, 1977
BseGI	GGATG	7 cut(s)	358, 651, 919, 952, 1206, 1327, 1726
BseJI	GATNNNNATC	2 cut(s)	951, 1636
BseMI	GCAATG	2 cut(s)	351, 1563
BseMII	CTCAG	8 cut(s)	524, 770, 1035, 1418, 1519, 1599, 1830, 1926
BseNI	ACTGG	7 cut(s)	213, 463, 608, 706, 1346, 1546, 1811
BseRI	GAGGAG	6 cut(s)	52, 55, 58, 61, 325, 796
BseSI	GKGCMC	1 cut(s)	28
BseX3I	CGGCCG	1 cut(s)	282
BseXI	GCAGC	3 cut(s)	970, 1379, 1852
BseYI	CCCAGC	1 cut(s)	1904
Bsh1236I	CGCG	5 cut(s)	228, 249, 385, 1835, 2109
Bsh1285I	CGRYCG	3 cut(s)	247, 285, 444
BshFI	GGCC	7 cut(s)	146, 185, 284, 408, 1092, 1439, 1463
BshVI	ATCGAT	3 cut(s)	189, 440, 444
BsiEI	CGRYCG	3 cut(s)	247, 285, 444
BsiHKAI	GWGCWC	1 cut(s)	1191
BsiHKCI	CYCGRG	2 cut(s)	194, 1860
BsiSI	CCGG	4 cut(s)	17, 137, 204, 1368
BslFI	GGGAC	2 cut(s)	344, 1851
BsmAI	GTCTC	8 cut(s)	529, 711, 1126, 1515, 1650, 1768, 1819, 1985
BsmBI	CGTCTC	1 cut(s)	529
BsmFI	GGGAC	2 cut(s)	344, 1851
BsmI	GAATGC	1 cut(s)	1558
BsnI	GGCC	7 cut(s)	146, 185, 284, 408, 1092, 1439, 1463
Bso31I	GGTCTC	1 cut(s)	1985
BsoBI	CYCGRG	2 cut(s)	194, 1860
Bsp1286I	GDGCHC	2 cut(s)	28, 1191
Bsp143I	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
Bsp19I	CCATGG	1 cut(s)	221
BspANI	GGCC	7 cut(s)	146, 185, 284, 408, 1092, 1439, 1463
BspCNI	CTCAG	8 cut(s)	525, 771, 1034, 1417, 1518, 1600, 1829, 1927
BspDI	ATCGAT	3 cut(s)	189, 440, 444
BspFNI	CGCG	5 cut(s)	228, 249, 385, 1835, 2109
BspLI	GGNNCC	2 cut(s)	594, 1354
BspMAI	CTGCAG	2 cut(s)	988, 1898
BspMI	ACCTGC	1 cut(s)	159
BspPI	GGATC	2 cut(s)	1935, 2084
BspTI	CTTAAG	2 cut(s)	266, 803
BspTNI	GGTCTC	1 cut(s)	1985
BsrDI	GCAATG	2 cut(s)	351, 1563
BsrFI	RCCGGY	1 cut(s)	136
BsrI	ACTGG	7 cut(s)	213, 463, 608, 706, 1346, 1546, 1811
BssAI	RCCGGY	1 cut(s)	136
BssECI	CCNNGG	4 cut(s)	221, 909, 1087, 1977
BssMI	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
BssNI	GRCGYC	1 cut(s)	2104
BssSI	CACGAG	1 cut(s)	1653
BssT1I	CCWWGG	3 cut(s)	221, 909, 1977
Bst2BI	CACGAG	1 cut(s)	1653
Bst4CI	ACNGT	4 cut(s)	30, 738, 1129, 1808
Bst6I	CTCTTC	2 cut(s)	638, 1101
BstACI	GRCGYC	1 cut(s)	2104
BstAFI	CTTAAG	2 cut(s)	266, 803
BstBAI	YACGTR	2 cut(s)	35, 47
BstC8I	GCNNGC	2 cut(s)	138, 406
BstDSI	CCRYGG	1 cut(s)	221
BstF5I	GGATG	7 cut(s)	358, 651, 919, 952, 1206, 1327, 1726
BstFNI	CGCG	5 cut(s)	228, 249, 385, 1835, 2109
BstH2I	RGCGCY	2 cut(s)	346, 533
BstHHI	GCGC	8 cut(s)	156, 220, 228, 251, 345, 532, 1910, 2111
BstKTI	GATC	7 cut(s)	193, 444, 844, 1491, 1930, 2092, 2155
BstMAI	GTCTC	8 cut(s)	529, 711, 1126, 1515, 1650, 1768, 1819, 1985
BstMBI	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
BstMCI	CGRYCG	3 cut(s)	247, 285, 444
BstMWI	GCNNNNNNNGC	3 cut(s)	1483, 1914, 1931
BstNSI	RCATGY	2 cut(s)	607, 1413
BstSCI	CCNGG	1 cut(s)	15
BstSFI	CTRYAG	2 cut(s)	984, 1894
BstSLI	GKGCMC	1 cut(s)	28
BstUI	CGCG	5 cut(s)	228, 249, 385, 1835, 2109
BstV1I	GCAGC	3 cut(s)	970, 1379, 1852
BstV2I	GAAGAC	2 cut(s)	1554, 1702
BstX2I	RGATCY	1 cut(s)	841
BstYI	RGATCY	1 cut(s)	841
BstZI	CGGCCG	1 cut(s)	282
Bsu15I	ATCGAT	3 cut(s)	189, 440, 444
BsuRI	GGCC	7 cut(s)	146, 185, 284, 408, 1092, 1439, 1463
BsuTUI	ATCGAT	3 cut(s)	189, 440, 444
BtgI	CCRYGG	1 cut(s)	221
BtrI	CACGTC	1 cut(s)	1150
BtsCI	GGATG	7 cut(s)	358, 651, 919, 952, 1206, 1327, 1726
BtsIMutI	CAGTG	6 cut(s)	26, 220, 615, 660, 1275, 1539
BveI	ACCTGC	1 cut(s)	159
Cac8I	GCNNGC	2 cut(s)	138, 406
CfoI	GCGC	8 cut(s)	156, 220, 228, 251, 345, 532, 1910, 2111
Cfr10I	RCCGGY	1 cut(s)	136
Cfr13I	GGNCC	5 cut(s)	407, 1091, 1332, 1462, 1808
ClaI	ATCGAT	3 cut(s)	189, 440, 444
CseI	GACGC	4 cut(s)	374, 752, 1384, 2093
Csp6I	GTAC	4 cut(s)	1138, 1166, 1591, 2067
CviAII	CATG	8 cut(s)	161, 222, 488, 604, 1001, 1070, 1361, 1410
CviQI	GTAC	4 cut(s)	1138, 1166, 1591, 2067
DpnI	GATC	7 cut(s)	192, 443, 843, 1490, 1929, 2091, 2154
DpnII	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
DrdI	GACNNNNNNGTC	1 cut(s)	1811
DriI	GACNNNNNGTC	1 cut(s)	1413
DseDI	GACNNNNNNGTC	1 cut(s)	1811
EaeI	YGGCCR	3 cut(s)	144, 183, 282
EagI	CGGCCG	1 cut(s)	282
Eam1104I	CTCTTC	2 cut(s)	638, 1101
Eam1105I	GACNNNNNGTC	1 cut(s)	1413
EarI	CTCTTC	2 cut(s)	638, 1101
EclXI	CGGCCG	1 cut(s)	282
Eco130I	CCWWGG	3 cut(s)	221, 909, 1977
Eco147I	AGGCCT	1 cut(s)	1439
Eco31I	GGTCTC	1 cut(s)	1985
Eco47I	GGWCC	2 cut(s)	1332, 1808
Eco47III	AGCGCT	1 cut(s)	344
Eco52I	CGGCCG	1 cut(s)	282
Eco57I	CTGAAG	3 cut(s)	287, 1131, 2166
Eco72I	CACGTG	2 cut(s)	35, 47
Eco88I	CYCGRG	2 cut(s)	194, 1860
EcoO109I	RGGNCCY	1 cut(s)	1332
EcoRI	GAATTC	1 cut(s)	1345
EcoT14I	CCWWGG	3 cut(s)	221, 909, 1977
ErhI	CCWWGG	3 cut(s)	221, 909, 1977
Esp3I	CGTCTC	1 cut(s)	529
FaeI	CATG	8 cut(s)	164, 225, 491, 607, 1004, 1073, 1364, 1413
FalI	AAGNNNNNCTT	2 cut(s)	332, 364
FaqI	GGGAC	2 cut(s)	344, 1851
FatI	CATG	8 cut(s)	160, 221, 487, 603, 1000, 1069, 1360, 1409
FauI	CCCGC	1 cut(s)	1828
FauNDI	CATATG	2 cut(s)	415, 553
Fnu4HI	GCNGC	4 cut(s)	157, 984, 1393, 1866
FokI	GGATG	7 cut(s)	345, 658, 926, 959, 1213, 1334, 1733
Fsp4HI	GCNGC	4 cut(s)	157, 984, 1393, 1866
FspBI	CTAG	2 cut(s)	573, 890
GlaI	GCGC	8 cut(s)	155, 219, 227, 250, 344, 531, 1909, 2110
GluI	GCNGC	4 cut(s)	157, 984, 1393, 1866
GsaI	CCCAGC	1 cut(s)	1908
GsuI	CTGGAG	4 cut(s)	196, 257, 1371, 1463
HaeII	RGCGCY	2 cut(s)	346, 533
HaeIII	GGCC	7 cut(s)	146, 185, 284, 408, 1092, 1439, 1463
HapII	CCGG	4 cut(s)	17, 137, 204, 1368
HgaI	GACGC	4 cut(s)	374, 752, 1384, 2093
HhaI	GCGC	8 cut(s)	156, 220, 228, 251, 345, 532, 1910, 2111
Hin1I	GRCGYC	1 cut(s)	2104
Hin1II	CATG	8 cut(s)	164, 225, 491, 607, 1004, 1073, 1364, 1413
Hin6I	GCGC	8 cut(s)	154, 218, 226, 249, 343, 530, 1908, 2109
HinP1I	GCGC	8 cut(s)	154, 218, 226, 249, 343, 530, 1908, 2109
HincII	GTYRAC	2 cut(s)	881, 1132
HindII	GTYRAC	2 cut(s)	881, 1132
HpaI	GTTAAC	1 cut(s)	1132
HpaII	CCGG	4 cut(s)	17, 137, 204, 1368
HphI	GGTGA	4 cut(s)	878, 952, 982, 1893
Hpy166II	GTNNAC	3 cut(s)	881, 1132, 1901
Hpy8I	GTNNAC	3 cut(s)	881, 1132, 1901
Hpy99I	CGWCG	2 cut(s)	257, 2109
HpyAV	CCTTC	9 cut(s)	331, 358, 485, 583, 937, 1022, 1110, 1777, 2141
HpyCH4III	ACNGT	4 cut(s)	30, 738, 1129, 1808
HpyCH4IV	ACGT	8 cut(s)	34, 46, 114, 255, 538, 1149, 1614, 1703
HpyCH4V	TGCA	9 cut(s)	404, 483, 601, 986, 1413, 1556, 1671, 1825, 1896
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1483, 1914, 1931
HpySE526I	ACGT	8 cut(s)	34, 46, 114, 255, 538, 1149, 1614, 1703
Hsp92I	GRCGYC	1 cut(s)	2104
Hsp92II	CATG	8 cut(s)	164, 225, 491, 607, 1004, 1073, 1364, 1413
HspAI	GCGC	8 cut(s)	154, 218, 226, 249, 343, 530, 1908, 2109
KroI	GCCGGC	1 cut(s)	136
KroNI	GCCGGC	1 cut(s)	138
KspAI	GTTAAC	1 cut(s)	1132
Kzo9I	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
LmnI	GCTCC	4 cut(s)	350, 1194, 1352, 1482
Lsp1109I	GCAGC	3 cut(s)	970, 1379, 1852
LweI	GCATC	2 cut(s)	1366, 1994
MaeI	CTAG	2 cut(s)	573, 890
MaeII	ACGT	8 cut(s)	34, 46, 114, 255, 538, 1149, 1614, 1703
MaeIII	GTNAC	7 cut(s)	30, 115, 738, 924, 1043, 1699, 1802
MalI	GATC	7 cut(s)	192, 443, 843, 1490, 1929, 2091, 2154
MboI	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
MfeI	CAATTG	1 cut(s)	1048
MflI	RGATCY	1 cut(s)	841
MhlI	GDGCHC	2 cut(s)	28, 1191
MlsI	TGGCCA	1 cut(s)	185
MluNI	TGGCCA	1 cut(s)	185
MlyI	GAGTC	6 cut(s)	224, 272, 326, 713, 722, 914
MmeI	TCCRAC	3 cut(s)	1216, 1362, 1490
Mox20I	TGGCCA	1 cut(s)	185
MroNI	GCCGGC	1 cut(s)	136
MroXI	GAANNNNTTC	1 cut(s)	656
MscI	TGGCCA	1 cut(s)	185
MslI	CAYNNNNRTG	2 cut(s)	608, 1719
Msp20I	TGGCCA	1 cut(s)	185
MspCI	CTTAAG	2 cut(s)	266, 803
MspI	CCGG	4 cut(s)	17, 137, 204, 1368
MspR9I	CCNGG	1 cut(s)	17
MunI	CAATTG	1 cut(s)	1048
Mva1269I	GAATGC	1 cut(s)	1558
MvnI	CGCG	5 cut(s)	228, 249, 385, 1835, 2109
MwoI	GCNNNNNNNGC	3 cut(s)	1483, 1914, 1931
NaeI	GCCGGC	1 cut(s)	138
NciI	CCSGG	1 cut(s)	17
NcoI	CCATGG	1 cut(s)	221
NdeI	CATATG	2 cut(s)	415, 553
NdeII	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
NgoMIV	GCCGGC	1 cut(s)	136
NlaIII	CATG	8 cut(s)	164, 225, 491, 607, 1004, 1073, 1364, 1413
NlaIV	GGNNCC	2 cut(s)	594, 1354
NmeAIII	GCCGAG	3 cut(s)	260, 310, 1068
NmuCI	GTSAC	4 cut(s)	30, 115, 1043, 1802
NspI	RCATGY	2 cut(s)	607, 1413
PaeR7I	CTCGAG	1 cut(s)	194
PceI	AGGCCT	1 cut(s)	1439
PcsI	WCGNNNNNNNCGW	2 cut(s)	186, 249
PctI	GAATGC	1 cut(s)	1558
PdiI	GCCGGC	1 cut(s)	138
PdmI	GAANNNNTTC	1 cut(s)	656
PfeI	GAWTC	8 cut(s)	207, 702, 786, 811, 1280, 1632, 1973, 2032
PflFI	GACNNNGTC	1 cut(s)	904
PkrI	GCNGC	4 cut(s)	158, 985, 1394, 1867
Ple19I	CGATCG	1 cut(s)	444
PleI	GAGTC	6 cut(s)	224, 272, 326, 713, 722, 913
PmaCI	CACGTG	2 cut(s)	35, 47
PmlI	CACGTG	2 cut(s)	35, 47
PpsI	GAGTC	6 cut(s)	224, 272, 326, 713, 722, 913
Ppu21I	YACGTR	2 cut(s)	35, 47
PpuMI	RGGWCCY	1 cut(s)	1332
Psp1406I	AACGTT	1 cut(s)	1614
Psp5II	RGGWCCY	1 cut(s)	1332
PspCI	CACGTG	2 cut(s)	35, 47
PspFI	CCCAGC	1 cut(s)	1904
PspN4I	GGNNCC	2 cut(s)	594, 1354
PspPI	GGNCC	5 cut(s)	407, 1091, 1332, 1462, 1808
PspPPI	RGGWCCY	1 cut(s)	1332
PstI	CTGCAG	2 cut(s)	988, 1898
PsuI	RGATCY	1 cut(s)	841
PsyI	GACNNNGTC	1 cut(s)	904
PvuI	CGATCG	1 cut(s)	444
RsaI	GTAC	4 cut(s)	1139, 1167, 1592, 2068
RsaNI	GTAC	4 cut(s)	1138, 1166, 1591, 2067
RseI	CAYNNNNRTG	2 cut(s)	608, 1719
SatI	GCNGC	4 cut(s)	157, 984, 1393, 1866
Sau3AI	GATC	7 cut(s)	190, 441, 841, 1488, 1927, 2089, 2152
Sau96I	GGNCC	5 cut(s)	407, 1091, 1332, 1462, 1808
ScaI	AGTACT	2 cut(s)	1139, 1167
SchI	GAGTC	6 cut(s)	224, 272, 326, 713, 722, 914
ScrFI	CCNGG	1 cut(s)	17
SduI	GDGCHC	2 cut(s)	28, 1191
SfaNI	GCATC	2 cut(s)	1366, 1994
SfcI	CTRYAG	2 cut(s)	984, 1894
Sfr274I	CTCGAG	1 cut(s)	194
SinI	GGWCC	2 cut(s)	1332, 1808
SlaI	CTCGAG	1 cut(s)	194
SmiMI	CAYNNNNRTG	2 cut(s)	608, 1719
SmlI	CTYRAG	4 cut(s)	194, 266, 803, 1646
SmoI	CTYRAG	4 cut(s)	194, 266, 803, 1646
SpeI	ACTAGT	1 cut(s)	889
SseBI	AGGCCT	1 cut(s)	1439
SspMI	CTAG	2 cut(s)	573, 890
StuI	AGGCCT	1 cut(s)	1439
StyD4I	CCNGG	1 cut(s)	15
StyI	CCWWGG	3 cut(s)	221, 909, 1977
TaaI	ACNGT	4 cut(s)	30, 738, 1129, 1808
TaiI	ACGT	8 cut(s)	37, 49, 117, 258, 541, 1152, 1617, 1706
TaqII	GACCGA	1 cut(s)	2063
TatI	WGTACW	2 cut(s)	1137, 1165
TauI	GCSGC	1 cut(s)	159
TfiI	GAWTC	8 cut(s)	207, 702, 786, 811, 1280, 1632, 1973, 2032
TscAI	CASTG	6 cut(s)	33, 220, 615, 667, 1282, 1546
TseFI	GTSAC	4 cut(s)	30, 115, 1043, 1802
TseI	GCWGC	3 cut(s)	983, 1392, 1865
Tsp45I	GTSAC	4 cut(s)	30, 115, 1043, 1802
TspGWI	ACGGA	4 cut(s)	658, 1193, 1213, 2082
TspRI	CASTG	6 cut(s)	33, 220, 615, 667, 1282, 1546
Tth111I	GACNNNGTC	1 cut(s)	904
Vha464I	CTTAAG	2 cut(s)	266, 803
VpaK11BI	GGWCC	2 cut(s)	1332, 1808
XapI	RAATTY	5 cut(s)	1082, 1115, 1345, 1757, 1769
XceI	RCATGY	2 cut(s)	607, 1413
XhoI	CTCGAG	1 cut(s)	194
XmnI	GAANNNNTTC	1 cut(s)	656
XspI	CTAG	2 cut(s)	573, 890
ZrmI	AGTACT	2 cut(s)	1139, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.