Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0008402

Physical Location & Seq

Genomic Coordinates Reverse (-)

1930312 .. 1934274

Gene Structure 3963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G024200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGAACACTCACCGCCCTGTGAGGGCTCTATCACGTGCGCTGTCACGTGCCCTATCCAACTCCTCGTCGTCCGTACAACCTTCATCGACCTTTCCTCTGAAAAACGTAACGAAGTCGAACTTCGAGCCGGCACTAGCCGAGCTGCGCCGCCATGTCGCCGCCGCCGACTTCGTGGCCATCGACCTCGAGATGACCGGCATCACCAGCGCGCCGTGGCGCGACTCGCTGGAGTTCGACCGAGCCGACGTCTGCTACCTAAAGGTCAAGGACTCGGCCGAGAAGTTCGCTGTGCTTCAGTTCGGCGTTTGCCCCTTTCGATGGGACTCTTCCAAGCAGTACTTCATTGCTCATCCGCACAATTTCTATATTTTTCCGCGTCAAGAGATTTTGGCCACAAACCCTGCTTATGAGTTCCTATGCCAGACTACATCAATTGATTTCTTAGCTAAATACCAGTTCGATTTCAATATCTGCATACATGAAGGAATATCTTATTTATCCAAAGGACAGGAAATTGAGGCACTAAGACATTTGAGTTTGGCATATGAGGATGAATTATTGGCTAAATGGTCAAACTTGAAAGAACCTGTGCACATGCCAGTGGTCAAGATGGCTGACACTCTCTTCACTGAACGGATGAAGAACATATTCACTGAATGGCGCGATGGGTTGTTGAGAAATAGTAATGGAGAACTCCAACTTCAGGGAAACTCAAATGACTCCCAACAACAGTTACGAATCATTTTCTTTAAGATGCGTCCTGCTCTTAGTCTGAGTGGATTCACTTCTCATCAGCTTAGGTTGATCCATTTGGTCATCAGAAGGCATTTCCAAGATCTTGCTTATGTTCAGATAAATGGTGAAAAGACCTGTCAGCAGCGACTAGTTGTGCGTACAGATTCCAAGGATGACAGGGAGTTACTTATGAAAGAGGTGAAGGATGAGCATTGTAGACAGGCAGAGGTGAAGGTTCAAGCTGCAGTTGGGTTTCGTCACGTTATTGACCTTCTTTCATCAGAACAGAAATTGATTGTTGGTCACAATTGCTTTCTTGATATTGCACATATATACAGCAAATTTGTAGGTCCTCTTCCTTCTACTGCTGAAGAGTTTGTCTCTTCTGTTAACAAGTGCTTTCCGTACGTCGTTGACACCAAAATGCTCTTGAATGCTAATAATGTGCTTCAGCAACGGATGAAGAAGTCCCAAACATCACTTTCGTCAGCATTTGCCATGTTATGCCCACAAATTGCTCTTGGGAAGAAAAGCACTGATCTGGCATTCCAATCGTGTGTTAAAGTTGAAGTTCAAGTGGATGATTTGAGGTCCTCCAACTGGAATTCTGGAGCCAAACATGAAGCGGGATATGATGCTTTTATGACAGGCTGTGTGTTTGCTCAGACATGCAGTCATCTAGGGATTGATTTTCAGTCGTTTTTGCCATCTGAACATTTGGCCCACAATGAGAAGCTGCAGAAGCACATCAACCTTCTATACCTTAGTTGGAGTAATAGAGACATTATTGATTTAACCAGTGGTAAGAAGAATGCAGTATCCTTGGGGTATACGAACCACAAAAAGAGGTACCCAGAGATTTTGTTTGAGAACATTGCTTTAATCTGGGGATTCCCATCAAAACTTAAGGCACGGGACATACGAGAATGCATCTCAAAAGTCTTTGGCCCGACATCTGTCACTTCTATCTACCACTTGGATGAAACTGCAGTATTCGTTCAGTTTAACAAGGAAAAATTTGTCTCTGAATTTCTTATTTTGAAGGAAACTTTAGAGAGAAGTGATGGTCCGGTCTCAGTTTTGCATCCTCTTGCTGGACTTTTAGAAGGTGGAAATACCCAAGCTGCTAATTACGAAACTTACAAAGACATTTGCAGTTCACCCAGCTCAAAGATCTTGTTTGCGGATCAGGCAGATGCAGTTGGTACTAAATGGAAAAATAAATTGATTGAATCTAAAGCAGCAATGGAGAGCCTAGAACGTGAGAGCTTTGGTGAAAAAAATGAAGTGAATACTGCTTTTGTGTTTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0010033 GO:0014070 GO:0033993 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

CAF1

Protein Analysis

683

Amino Acids

77.36

Weight (kDa)

7.58

Isoelectric Point (pI)

43.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55870 AT1G55870 AT1G55870 AT1G55870
fragaria_vesca	FvH4_3g42970 FvH4_3g42970
malus_domestica	MD03G1026800.v1.1 MD11G1030900.v1.1
prunus_persica	Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1 Prupe.6G024200_v2.0.a1
pyrus_communis	pycom03g02190 pycom11g02610
rosa_chinensis	RchiOBHm_Chr5g0077021
rosa_laevigata	RLG00000036642
rosa_roxburghii	Rroxscaffold_1G00005120
rosa_rugosa	Rorug05G0450400
rosa_samantha	Rh5AG505000 Rh5BG526700 Rh5CG550500 Rh5DG538900
rosa_wichuraiana	Rw5G047140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	249
Acc65I	GGTACC	1 cut(s)	1584
AccB1I	GGYRCC	1 cut(s)	1584
AccI	GTMKAC	2 cut(s)	952, 1565
AccII	CGCG	4 cut(s)	209, 219, 376, 663
AciI	CCGC	8 cut(s)	13, 148, 159, 162, 353, 374, 1361, 1919
AclWI	GGATC	2 cut(s)	799, 1929
AcoI	YGGCCR	3 cut(s)	174, 273, 390
AcsI	RAATTY	4 cut(s)	1076, 1339, 1751, 1763
AcuI	CTGAAG	4 cut(s)	278, 686, 1125, 1169
AcvI	CACGTG	2 cut(s)	35, 47
AcyI	GRCGYC	1 cut(s)	246
AfaI	GTAC	6 cut(s)	75, 338, 895, 1142, 1586, 1942
AfiI	CCNNNNNNNGG	5 cut(s)	22, 318, 703, 1335, 1829
AflII	CTTAAG	1 cut(s)	1640
AgsI	TTSAA	8 cut(s)	466, 580, 974, 1168, 1304, 1310, 1777, 1967
AhdI	GACNNNNNGTC	1 cut(s)	1407
AhlI	ACTAGT	1 cut(s)	883
AjuI	GAANNNNNNNTTGG	2 cut(s)	323, 355
AluBI	AGCT	8 cut(s)	142, 446, 796, 977, 1471, 1859, 1902, 2004
AluI	AGCT	8 cut(s)	142, 446, 796, 977, 1471, 1859, 1902, 2004
Alw21I	GWGCWC	1 cut(s)	594
Alw26I	GTCTC	4 cut(s)	1120, 1509, 1762, 1813
Alw44I	GTGCAC	1 cut(s)	590
AlwI	GGATC	2 cut(s)	799, 1929
Ama87I	CYCGRG	1 cut(s)	185
AoxI	GGCC	5 cut(s)	174, 273, 390, 1455, 1681
ApaLI	GTGCAC	1 cut(s)	590
ApeKI	GCWGC	6 cut(s)	142, 877, 977, 1471, 1859, 1976
ApoI	RAATTY	4 cut(s)	1076, 1339, 1751, 1763
Asp700I	GAANNNNTTC	1 cut(s)	647
Asp718I	GGTACC	1 cut(s)	1584
AspLEI	GCGC	6 cut(s)	40, 147, 209, 211, 219, 663
AspS9I	GGNCC	5 cut(s)	1085, 1326, 1456, 1682, 1802
AsuHPI	GGTGA	6 cut(s)	193, 872, 946, 976, 1887, 2021
AvaI	CYCGRG	1 cut(s)	185
AvaII	GGWCC	3 cut(s)	1085, 1326, 1802
BaeGI	GKGCMC	2 cut(s)	52, 594
BalI	TGGCCA	2 cut(s)	176, 392
BanI	GGYRCC	1 cut(s)	1584
BanII	GRGCYC	1 cut(s)	28
BarI	GAAGNNNNNNTAC	2 cut(s)	1074, 1106
BbrPI	CACGTG	2 cut(s)	35, 47
Bbv12I	GWGCWC	1 cut(s)	594
BbvI	GCAGC	6 cut(s)	129, 889, 964, 1458, 1846, 1988
BccI	CCATC	7 cut(s)	185, 312, 604, 659, 1450, 1639, 1793
BceAI	ACGGC	1 cut(s)	196
BcgI	CGANNNNNNTGC	2 cut(s)	1269, 1303
BciVI	GTATCC	1 cut(s)	1564
BcoDI	GTCTC	4 cut(s)	1120, 1509, 1762, 1813
BcuI	ACTAGT	1 cut(s)	883
BfaI	CTAG	4 cut(s)	134, 884, 1415, 1991
BfmI	CTRYAG	3 cut(s)	978, 1472, 1722
BfrI	CTTAAG	1 cut(s)	1640
BfuI	GTATCC	1 cut(s)	1564
BglII	AGATCT	2 cut(s)	835, 1908
BisI	GCNGC	9 cut(s)	143, 148, 159, 162, 878, 978, 1472, 1860, 1977
BlsI	GCNGC	9 cut(s)	144, 149, 160, 163, 879, 979, 1473, 1861, 1978
BmcAI	AGTACT	1 cut(s)	338
Bme18I	GGWCC	3 cut(s)	1085, 1326, 1802
BmeRI	GACNNNNNGTC	1 cut(s)	1407
BmeT110I	CYCGRG	1 cut(s)	185
BmgT120I	GGNCC	5 cut(s)	1085, 1326, 1456, 1682, 1802
BmiI	GGNNCC	2 cut(s)	1348, 1586
BmsI	GCATC	6 cut(s)	207, 744, 1360, 1674, 1828, 1921
BoxI	GACNNNNGTC	1 cut(s)	1691
BplI	GAGNNNNNCTC	2 cut(s)	1100, 1132
BpmI	CTGGAG	2 cut(s)	248, 1365
Bpu10I	CCTNAGC	1 cut(s)	797
BsaAI	YACGTR	2 cut(s)	35, 47
BsaBI	GATNNNNATC	1 cut(s)	1630
BsaHI	GRCGYC	1 cut(s)	246
BsaI	GGTCTC	1 cut(s)	1813
BsaJI	CCNNGG	3 cut(s)	212, 903, 1557
BsaWI	WCCGGW	1 cut(s)	1804
Bsc4I	CCNNNNNNNGG	5 cut(s)	22, 318, 703, 1335, 1829
Bse118I	RCCGGY	2 cut(s)	127, 194
Bse1I	ACTGG	4 cut(s)	454, 599, 1340, 1533
Bse3DI	GCAATG	3 cut(s)	342, 1608, 1986
Bse8I	GATNNNNATC	1 cut(s)	1630
BseDI	CCNNGG	3 cut(s)	212, 903, 1557
BseGI	GGATG	9 cut(s)	349, 556, 642, 913, 946, 1200, 1321, 1720, 1819
BseJI	GATNNNNATC	1 cut(s)	1630
BseLI	CCNNNNNNNGG	5 cut(s)	22, 318, 703, 1335, 1829
BseMI	GCAATG	3 cut(s)	342, 1608, 1986
BseMII	CTCAG	3 cut(s)	764, 1412, 1824
BseNI	ACTGG	4 cut(s)	454, 599, 1340, 1533
BsePI	GCGCGC	1 cut(s)	207
BseRI	GAGGAG	1 cut(s)	52
BseSI	GKGCMC	2 cut(s)	52, 594
BseX3I	CGGCCG	1 cut(s)	273
BseXI	GCAGC	6 cut(s)	129, 889, 964, 1458, 1846, 1988
BseYI	CCCAGC	1 cut(s)	1898
Bsh1236I	CGCG	4 cut(s)	209, 219, 376, 663
Bsh1285I	CGRYCG	2 cut(s)	238, 276
BshFI	GGCC	5 cut(s)	176, 275, 392, 1457, 1683
BshNI	GGYRCC	1 cut(s)	1584
BsiEI	CGRYCG	2 cut(s)	238, 276
BsiHKAI	GWGCWC	1 cut(s)	594
BsiHKCI	CYCGRG	1 cut(s)	185
BsiSI	CCGG	3 cut(s)	128, 195, 1805
BsiWI	CGTACG	1 cut(s)	1140
BslFI	GGGAC	3 cut(s)	335, 1189, 1664
BslI	CCNNNNNNNGG	5 cut(s)	22, 318, 703, 1335, 1829
BsmAI	GTCTC	4 cut(s)	1120, 1509, 1762, 1813
BsmFI	GGGAC	3 cut(s)	335, 1189, 1664
BsmI	GAATGC	4 cut(s)	1174, 1280, 1552, 1667
BsnI	GGCC	5 cut(s)	176, 275, 392, 1457, 1683
Bso31I	GGTCTC	1 cut(s)	1813
BsoBI	CYCGRG	1 cut(s)	185
Bsp1286I	GDGCHC	3 cut(s)	28, 52, 594
Bsp143I	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
BspACI	CCGC	8 cut(s)	13, 148, 159, 162, 353, 374, 1361, 1919
BspANI	GGCC	5 cut(s)	176, 275, 392, 1457, 1683
BspCNI	CTCAG	3 cut(s)	765, 1411, 1823
BspFNI	CGCG	4 cut(s)	209, 219, 376, 663
BspLI	GGNNCC	2 cut(s)	1348, 1586
BspMAI	CTGCAG	3 cut(s)	982, 1476, 1726
BspPI	GGATC	2 cut(s)	799, 1929
BspT107I	GGYRCC	1 cut(s)	1584
BspTI	CTTAAG	1 cut(s)	1640
BspTNI	GGTCTC	1 cut(s)	1813
BsrDI	GCAATG	3 cut(s)	342, 1608, 1986
BsrFI	RCCGGY	2 cut(s)	127, 194
BsrI	ACTGG	4 cut(s)	454, 599, 1340, 1533
BssAI	RCCGGY	2 cut(s)	127, 194
BssECI	CCNNGG	3 cut(s)	212, 903, 1557
BssHII	GCGCGC	1 cut(s)	207
BssMI	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
BssNAI	GTATAC	1 cut(s)	1566
BssNI	GRCGYC	1 cut(s)	246
BssT1I	CCWWGG	2 cut(s)	903, 1557
Bst1107I	GTATAC	1 cut(s)	1566
Bst4CI	ACNGT	1 cut(s)	732
Bst6I	CTCTTC	5 cut(s)	331, 629, 1095, 1101, 1123
BstACI	GRCGYC	1 cut(s)	246
BstAFI	CTTAAG	1 cut(s)	1640
BstBAI	YACGTR	2 cut(s)	35, 47
BstC8I	GCNNGC	2 cut(s)	129, 209
BstDEI	CTNAG	8 cut(s)	442, 524, 767, 773, 797, 1398, 1499, 1810
BstDSI	CCRYGG	1 cut(s)	212
BstF5I	GGATG	9 cut(s)	349, 556, 642, 913, 946, 1200, 1321, 1720, 1819
BstFNI	CGCG	4 cut(s)	209, 219, 376, 663
BstHHI	GCGC	6 cut(s)	40, 147, 209, 211, 219, 663
BstKTI	GATC	5 cut(s)	807, 838, 1276, 1911, 1924
BstMAI	GTCTC	4 cut(s)	1120, 1509, 1762, 1813
BstMBI	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
BstMCI	CGRYCG	2 cut(s)	238, 276
BstMWI	GCNNNNNNNGC	4 cut(s)	204, 223, 1477, 1925
BstNSI	RCATGY	2 cut(s)	598, 1407
BstPAI	GACNNNNGTC	1 cut(s)	1691
BstSFI	CTRYAG	3 cut(s)	978, 1472, 1722
BstSLI	GKGCMC	2 cut(s)	52, 594
BstUI	CGCG	4 cut(s)	209, 219, 376, 663
BstV1I	GCAGC	6 cut(s)	129, 889, 964, 1458, 1846, 1988
BstX2I	RGATCY	2 cut(s)	835, 1908
BstYI	RGATCY	2 cut(s)	835, 1908
BstZ17I	GTATAC	1 cut(s)	1566
BstZI	CGGCCG	1 cut(s)	273
BsuI	GTATCC	1 cut(s)	1564
BsuRI	GGCC	5 cut(s)	176, 275, 392, 1457, 1683
BtgI	CCRYGG	1 cut(s)	212
BtgZI	GCGATG	1 cut(s)	678
BtsCI	GGATG	9 cut(s)	349, 556, 642, 913, 946, 1200, 1321, 1720, 1819
BtsIMutI	CAGTG	5 cut(s)	606, 627, 651, 1269, 1540
Cac8I	GCNNGC	2 cut(s)	129, 209
CfoI	GCGC	6 cut(s)	40, 147, 209, 211, 219, 663
Cfr10I	RCCGGY	2 cut(s)	127, 194
Cfr13I	GGNCC	5 cut(s)	1085, 1326, 1456, 1682, 1802
CseI	GACGC	2 cut(s)	365, 746
Csp6I	GTAC	6 cut(s)	74, 337, 894, 1141, 1585, 1941
CviAII	CATG	6 cut(s)	152, 479, 595, 1234, 1355, 1404
CviQI	GTAC	6 cut(s)	74, 337, 894, 1141, 1585, 1941
DdeI	CTNAG	8 cut(s)	442, 524, 767, 773, 797, 1398, 1499, 1810
DpnI	GATC	5 cut(s)	806, 837, 1275, 1910, 1923
DpnII	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
DriI	GACNNNNNGTC	1 cut(s)	1407
EaeI	YGGCCR	3 cut(s)	174, 273, 390
EagI	CGGCCG	1 cut(s)	273
Eam1104I	CTCTTC	5 cut(s)	331, 629, 1095, 1101, 1123
Eam1105I	GACNNNNNGTC	1 cut(s)	1407
EarI	CTCTTC	5 cut(s)	331, 629, 1095, 1101, 1123
EclXI	CGGCCG	1 cut(s)	273
Eco130I	CCWWGG	2 cut(s)	903, 1557
Eco24I	GRGCYC	1 cut(s)	28
Eco31I	GGTCTC	1 cut(s)	1813
Eco47I	GGWCC	3 cut(s)	1085, 1326, 1802
Eco52I	CGGCCG	1 cut(s)	273
Eco57I	CTGAAG	4 cut(s)	278, 686, 1125, 1169
Eco72I	CACGTG	2 cut(s)	35, 47
Eco88I	CYCGRG	1 cut(s)	185
EcoO109I	RGGNCCY	2 cut(s)	1085, 1326
EcoRI	GAATTC	1 cut(s)	1339
EcoT14I	CCWWGG	2 cut(s)	903, 1557
EcoT22I	ATGCAT	1 cut(s)	1667
EcoT38I	GRGCYC	1 cut(s)	28
ErhI	CCWWGG	2 cut(s)	903, 1557
FaeI	CATG	6 cut(s)	155, 482, 598, 1237, 1358, 1407
FalI	AAGNNNNNCTT	4 cut(s)	104, 136, 323, 355
FaqI	GGGAC	3 cut(s)	335, 1189, 1664
FatI	CATG	6 cut(s)	151, 478, 594, 1233, 1354, 1403
FauI	CCCGC	1 cut(s)	1354
FauNDI	CATATG	1 cut(s)	544
FblI	GTMKAC	2 cut(s)	952, 1565
Fnu4HI	GCNGC	9 cut(s)	143, 148, 159, 162, 878, 978, 1472, 1860, 1977
FokI	GGATG	9 cut(s)	336, 563, 649, 920, 953, 1207, 1328, 1727, 1806
FriOI	GRGCYC	1 cut(s)	28
Fsp4HI	GCNGC	9 cut(s)	143, 148, 159, 162, 878, 978, 1472, 1860, 1977
FspBI	CTAG	4 cut(s)	134, 884, 1415, 1991
GlaI	GCGC	6 cut(s)	39, 146, 208, 210, 218, 662
GluI	GCNGC	9 cut(s)	143, 148, 159, 162, 878, 978, 1472, 1860, 1977
GsaI	CCCAGC	1 cut(s)	1902
GsuI	CTGGAG	2 cut(s)	248, 1365
HaeIII	GGCC	5 cut(s)	176, 275, 392, 1457, 1683
HapII	CCGG	3 cut(s)	128, 195, 1805
HgaI	GACGC	2 cut(s)	365, 746
HhaI	GCGC	6 cut(s)	40, 147, 209, 211, 219, 663
Hin1I	GRCGYC	1 cut(s)	246
Hin1II	CATG	6 cut(s)	155, 482, 598, 1237, 1358, 1407
Hin6I	GCGC	6 cut(s)	38, 145, 207, 209, 217, 661
HinP1I	GCGC	6 cut(s)	38, 145, 207, 209, 217, 661
HincII	GTYRAC	2 cut(s)	1126, 1150
HindII	GTYRAC	2 cut(s)	1126, 1150
HinfI	GANTC	9 cut(s)	221, 269, 323, 719, 738, 780, 899, 1626, 1967
HpaI	GTTAAC	1 cut(s)	1126
HpaII	CCGG	3 cut(s)	128, 195, 1805
HphI	GGTGA	6 cut(s)	193, 872, 946, 976, 1887, 2021
Hpy166II	GTNNAC	6 cut(s)	592, 953, 1126, 1150, 1566, 1895
Hpy188I	TCNGA	8 cut(s)	99, 774, 821, 852, 1018, 1401, 1447, 1762
Hpy188III	TCNNGA	6 cut(s)	187, 380, 607, 1052, 1165, 1344
Hpy8I	GTNNAC	6 cut(s)	592, 953, 1126, 1150, 1566, 1895
Hpy99I	CGWCG	3 cut(s)	70, 248, 1148
HpyCH4III	ACNGT	1 cut(s)	732
HpyCH4IV	ACGT	7 cut(s)	34, 46, 105, 246, 996, 1143, 1996
HpyF10VI	GCNNNNNNNGC	4 cut(s)	204, 223, 1477, 1925
HpyF3I	CTNAG	8 cut(s)	442, 524, 767, 773, 797, 1398, 1499, 1810
HpySE526I	ACGT	7 cut(s)	34, 46, 105, 246, 996, 1143, 1996
Hsp92I	GRCGYC	1 cut(s)	246
Hsp92II	CATG	6 cut(s)	155, 482, 598, 1237, 1358, 1407
HspAI	GCGC	6 cut(s)	38, 145, 207, 209, 217, 661
KpnI	GGTACC	1 cut(s)	1588
KroI	GCCGGC	1 cut(s)	127
KroNI	GCCGGC	1 cut(s)	129
KspAI	GTTAAC	1 cut(s)	1126
Kzo9I	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
LmnI	GCTCC	1 cut(s)	1346
Lsp1109I	GCAGC	6 cut(s)	129, 889, 964, 1458, 1846, 1988
LweI	GCATC	6 cut(s)	207, 744, 1360, 1674, 1828, 1921
MaeI	CTAG	4 cut(s)	134, 884, 1415, 1991
MaeII	ACGT	7 cut(s)	34, 46, 105, 246, 996, 1143, 1996
MaeIII	GTNAC	7 cut(s)	42, 106, 732, 918, 992, 1037, 1693
MalI	GATC	5 cut(s)	806, 837, 1275, 1910, 1923
MboI	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
MboII	GAAGA	9 cut(s)	318, 616, 652, 1082, 1110, 1118, 1210, 1273, 1555
MfeI	CAATTG	2 cut(s)	432, 1042
MflI	RGATCY	2 cut(s)	835, 1908
MhlI	GDGCHC	3 cut(s)	28, 52, 594
MlsI	TGGCCA	2 cut(s)	176, 392
MluNI	TGGCCA	2 cut(s)	176, 392
MlyI	GAGTC	4 cut(s)	215, 263, 317, 713
MmeI	TCCRAC	4 cut(s)	81, 721, 1356, 1484
Mox20I	TGGCCA	2 cut(s)	176, 392
Mph1103I	ATGCAT	1 cut(s)	1667
MroNI	GCCGGC	1 cut(s)	127
MroXI	GAANNNNTTC	1 cut(s)	647
MscI	TGGCCA	2 cut(s)	176, 392
MseI	TTAA	7 cut(s)	750, 1125, 1296, 1529, 1616, 1641, 1740
MslI	CAYNNNNRTG	3 cut(s)	599, 1157, 1713
Msp20I	TGGCCA	2 cut(s)	176, 392
MspCI	CTTAAG	1 cut(s)	1640
MspI	CCGG	3 cut(s)	128, 195, 1805
MunI	CAATTG	2 cut(s)	432, 1042
Mva1269I	GAATGC	4 cut(s)	1174, 1280, 1552, 1667
MvnI	CGCG	4 cut(s)	209, 219, 376, 663
MwoI	GCNNNNNNNGC	4 cut(s)	204, 223, 1477, 1925
NaeI	GCCGGC	1 cut(s)	129
NdeI	CATATG	1 cut(s)	544
NdeII	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
NgoMIV	GCCGGC	1 cut(s)	127
NlaIII	CATG	6 cut(s)	155, 482, 598, 1237, 1358, 1407
NlaIV	GGNNCC	2 cut(s)	1348, 1586
NmeAIII	GCCGAG	3 cut(s)	163, 251, 301
NmuCI	GTSAC	4 cut(s)	42, 992, 1037, 1693
NsiI	ATGCAT	1 cut(s)	1667
NspI	RCATGY	2 cut(s)	598, 1407
PaeR7I	CTCGAG	1 cut(s)	185
PauI	GCGCGC	1 cut(s)	207
PcsI	WCGNNNNNNNCGW	4 cut(s)	162, 177, 240, 1654
PctI	GAATGC	4 cut(s)	1174, 1280, 1552, 1667
PdiI	GCCGGC	1 cut(s)	129
PdmI	GAANNNNTTC	1 cut(s)	647
PfeI	GAWTC	5 cut(s)	738, 780, 899, 1626, 1967
Pfl23II	CGTACG	1 cut(s)	1140
PkrI	GCNGC	9 cut(s)	144, 149, 160, 163, 879, 979, 1473, 1861, 1978
PleI	GAGTC	4 cut(s)	215, 263, 317, 713
PmaCI	CACGTG	2 cut(s)	35, 47
PmlI	CACGTG	2 cut(s)	35, 47
PpsI	GAGTC	4 cut(s)	215, 263, 317, 713
Ppu21I	YACGTR	2 cut(s)	35, 47
PpuMI	RGGWCCY	2 cut(s)	1085, 1326
PshAI	GACNNNNGTC	1 cut(s)	1691
Psp5II	RGGWCCY	2 cut(s)	1085, 1326
PspCI	CACGTG	2 cut(s)	35, 47
PspFI	CCCAGC	1 cut(s)	1898
PspLI	CGTACG	1 cut(s)	1140
PspN4I	GGNNCC	2 cut(s)	1348, 1586
PspPI	GGNCC	5 cut(s)	1085, 1326, 1456, 1682, 1802
PspPPI	RGGWCCY	2 cut(s)	1085, 1326
PstI	CTGCAG	3 cut(s)	982, 1476, 1726
PsuI	RGATCY	2 cut(s)	835, 1908
PteI	GCGCGC	1 cut(s)	207
RsaI	GTAC	6 cut(s)	75, 338, 895, 1142, 1586, 1942
RsaNI	GTAC	6 cut(s)	74, 337, 894, 1141, 1585, 1941
RseI	CAYNNNNRTG	3 cut(s)	599, 1157, 1713
SaqAI	TTAA	7 cut(s)	750, 1125, 1296, 1529, 1616, 1641, 1740
SatI	GCNGC	9 cut(s)	143, 148, 159, 162, 878, 978, 1472, 1860, 1977
Sau3AI	GATC	5 cut(s)	804, 835, 1273, 1908, 1921
Sau96I	GGNCC	5 cut(s)	1085, 1326, 1456, 1682, 1802
ScaI	AGTACT	1 cut(s)	338
SchI	GAGTC	4 cut(s)	215, 263, 317, 713
SduI	GDGCHC	3 cut(s)	28, 52, 594
SfaNI	GCATC	6 cut(s)	207, 744, 1360, 1674, 1828, 1921
SfcI	CTRYAG	3 cut(s)	978, 1472, 1722
Sfr274I	CTCGAG	1 cut(s)	185
SinI	GGWCC	3 cut(s)	1085, 1326, 1802
SlaI	CTCGAG	1 cut(s)	185
SmiMI	CAYNNNNRTG	3 cut(s)	599, 1157, 1713
SmlI	CTYRAG	2 cut(s)	185, 1640
SmoI	CTYRAG	2 cut(s)	185, 1640
SpeI	ACTAGT	1 cut(s)	883
SsiI	CCGC	8 cut(s)	13, 148, 159, 162, 353, 374, 1361, 1919
SspMI	CTAG	4 cut(s)	134, 884, 1415, 1991
StyI	CCWWGG	2 cut(s)	903, 1557
TaaI	ACNGT	1 cut(s)	732
TaiI	ACGT	7 cut(s)	37, 49, 108, 249, 999, 1146, 1999
TaqI	TCGA	8 cut(s)	86, 116, 123, 180, 186, 234, 316, 459
TaqII	GACCGA	1 cut(s)	252
TatI	WGTACW	1 cut(s)	336
TauI	GCSGC	3 cut(s)	150, 161, 164
TfiI	GAWTC	5 cut(s)	738, 780, 899, 1626, 1967
Tru1I	TTAA	7 cut(s)	750, 1125, 1296, 1529, 1616, 1641, 1740
Tru9I	TTAA	7 cut(s)	750, 1125, 1296, 1529, 1616, 1641, 1740
TscAI	CASTG	5 cut(s)	606, 634, 658, 1276, 1540
TseFI	GTSAC	4 cut(s)	42, 992, 1037, 1693
TseI	GCWGC	6 cut(s)	142, 877, 977, 1471, 1859, 1976
Tsp45I	GTSAC	4 cut(s)	42, 992, 1037, 1693
TspGWI	ACGGA	4 cut(s)	61, 649, 1128, 1207
TspRI	CASTG	5 cut(s)	606, 634, 658, 1276, 1540
Vha464I	CTTAAG	1 cut(s)	1640
VneI	GTGCAC	1 cut(s)	590
VpaK11BI	GGWCC	3 cut(s)	1085, 1326, 1802
XapI	RAATTY	4 cut(s)	1076, 1339, 1751, 1763
XceI	RCATGY	2 cut(s)	598, 1407
XhoI	CTCGAG	1 cut(s)	185
XmiI	GTMKAC	2 cut(s)	952, 1565
XmnI	GAANNNNTTC	1 cut(s)	647
XspI	CTAG	4 cut(s)	134, 884, 1415, 1991
ZraI	GACGTC	1 cut(s)	247
ZrmI	AGTACT	1 cut(s)	338
Zsp2I	ATGCAT	1 cut(s)	1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.