AT1G61690

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011014
Physical Location & Seq
Reverse (-)
22782427 .. 22786942
4516 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61690.1

Sequence Viewer

Length: 3516 bp
ATGTTGGAGAAGATCGGATTACCGCCGAAGCCATCTCTAAGAGGAAATAGTTGGGTCGTTGATGCTTCTCATTGTCAAGGATGTTCTTCTCAATTCACTTTCATCAATCGCAAGCATCATTGCCGGAGATGTGGGGGATTGTTCTGTGGAACCTGCACTCAGCAAAGGTTGTCACTACGTGGACAAGGTGACTCACCTGTGCGTATATGTGAACCATGTAAGAAAATTGAAGAAGCTGCACGGTTTGAGTTGCGTCATGGTTACAAAAATAGAGCTGCTAAAGGAGGTAGCTCGAAAAGGACTGTAAAGAATGAGGATGATGTTCTCAGTGAGATTCTAGGCTCTGATGTTGATGTATCTTCTTCATCTGAATCTGTGTCTAGCACAGACAGGAATGCTTCTAAAGAAATGGCAAGTAGCAGTAGTAATAAAGGTATGGAGTTGGATGCTAGTCCTGAAGAATTGCGTAAACAAGCAGTAGAAGCGAAGAATAAGTACAGAATTCTTAAAGGAGAAGGGAAATCTGATGAAGCTCTAAAAGCATTTAAGAGAGGGAGGGAACTTGAGAGAGAGGCCGACGCATTAGAGATATCTTTAAGAAGGAACCGGAAAAGGGAACTGTCTATGCGAAATGTTGCTGAGACGCAGAACAAGGCTGCTACCAAAGAATCTAGCAAATCACAAAAGCCTCTACGTCAAGGGGGTAAAGGAAATGATGATTTGGCAGCTGACCTGAGGGAGCTTGGGTGGTCTGACGATGAAGATAAGAAACCAGCAACTATAAGTTTGGAGGGCGAATTTTCGTCTCTTCTCCGTGAAATTCCGCGAAGTGCTAATCCTCAGAAGACTGGGGGTATTGACAAGAGTCAGGTAATTGCCCTTAAGAGAAAAGCCCTTACGCTGAAACGTGAAGGGAAGCTTGCGGAAGCTAAAGATGAACTGAAAAAGGCTAAAATTTTGGAAAGGGAACTGGAAGAGCAGGAACTTTTGGGTGGAGCTGATGGATCAGATGATGAGCTATCTGCACTTATTAATAGTATGGATGATGACAAAGAAGATGATCTGTTAGCTCAATACGAGGGAAGCCATGATTTCGACATTAGTAACCTTGTGGGAAATTTAGATGATATTGGAGTTCATGGTGAATATGATGTCACAGATGAAGATATGGAGGACCCAGCAATCGCTGCTGCATTGAAATCTTTGGGTTGGAGTGAGGATCCTGGACACCATGAGAATGTCCACTCTCGACCATCTCCTAAAAACAGAGATGAAAGTTTAGCTGAAATTCAGACATTGAAAAGAGAGGCCCTTAATCTAAAACGGGCTGGAAATGTCGTTGAGGCCATGGCTACACTAAAGAAGGCAAAATTACTTGAGAAGGAACTAGAGGCTGCTGATACTTCCTCTGAAACTGTTGACACAACTAGGGCAGAGAGGGATACGAGTCTTAAACCTCCTCCCAGAAGCAGGCTAGCGATTCAGAAAGAACTTCTTGCAGTGAAAAAGAAAGCACTTACTTTGAGAAGGGAAGGAAAGTTTAACGAAGCAGAAGAAGAATTGAAGAAAGGAGCGGTTCTCCAAAATCAGCTTGATGAGCTGGACAATTCGTCAAAGTTAGCTGCCACAGGGAAGGCCACTCGTGAAAAAGGAAATGATCTGCCTGATATTAGTTCTCTGGATGATGATGGAGAGGTGGATGTAAAAGATGAGGAGTTAAATGATCCGAATTACTTGTCGATGCTAAAGAGCTTAGGTTGGAATGATGAAGATAATAATCCTGCAGGTCCTTCATCAGAAAAATCTGACCCACTAAATTCTCGACCAGGGAAAACAGCAGAAGCTCAAGGTGCATATGAAGTACGTGTTACTAAACCAAGGAGAACTAAAGCAGAAATACAACGAGAACTCTTAGGGCTGAAAAGAAAGGCTTTAACTTTGCGACGACAGGGTAATGTTGATGAAGCTGAGGAAGTTCTGAACCAGACACAAATATTGGAAGCTCAGATAATGGAGATTGATTCAGGCAAGAATCTATATGCTGACAGTGATCAGCCGAAAAAACGATCCAATGATCTTGCCACCGACAGTCGGCTCAATGGAGGAGATGATAGCGTTACAGAAAATGATATGAAGGACCCAGCGTTATTGTCGACTCTTAAGAATTTGGGATGGGAGGATGAAGAACCAAAGAAAGAAGAAGCTTCTTTCGGCTCTGTGCAGTCAAGCGGTCCACGGATAGCAGCCAAAAGCAAGGGACAAATCCAAAGAGAACTTCTTGACTTAAAAAGAAAGGCACTTGCCTTCAAGCGTCAAGGGAAAACTGGAGATGCTGATGAATTATACAGTAAGGCCAGTGTTTTGGAGGCACAGCTAGCAGAACTGGAAACCCCCAAGATGGAGATGAAAGGCTCAGCTTCTGCAATTAAACCTGAAAACTACATGGATGTTGATTTATTAGTTGGATCGCAAATGGAGGATAAAGCGATAAAATCTGCTAGTGTTTCTCATGCTCCTCAAGATAGTTATGACTTGTTAGGAGACTTTATCTCCCCTGCTAAATCTGGTTCCTCTGGCGTTGTTTCTCAACCTGGCCAGCAGCAACCAAGTATGATGGATTTGCTGACTGGTGAGCATTCTGAGAGGTCTCAAATTCATGCAGAAAAAGGAAATGCTGAGACTATGTCAGGCTTTCGTTCAGGAAACAATCACGGCGCTGAACAAAGAGTGGCACGTGAAGAGTCAGAGCCCAGTCATATTCAATCAGCTTCGATTCAAAATACATCTCCTCAGAACACCCTTAAACAAGAGATTCTGGCTCATAAGAAAAAGGCACTTGCCTTAAAGAGAGAAGGAAACATAAGTGAAGCCAAAAAGGCATTGCAAGAAGCAAAATTGTTGGAGAGGAGACTACAAGAAGGAGAAAATCCCTCTCCTGAAAAGCTCGGACGAGATGATATGGTTTCCACAACGGAGGATCCTCCTGCTCGAGAGAAAGAGAATAGTCCTTCAAGTTCAGCTCCAAAGGCAATGTCAGGTCGTGACCGTTTTAAGCTGCAGCAAGAGTCACTAAGTCACAAACGTCAAGCCATGAAGCTTCGGAGGGAAGGTAAAATGCAGGAAGCTGAAGCTGAGTTTGAAATCGCCAAAACTCTTGAAGCTCAATTGGAAGATTCAACATCCTCTAAACCAGAACCGGTGGACGATGTAGCGGTGGAAGATTTTCTCGATCCTCAACTCCTGTCTGCCCTCAAAGCTATTGGATTAGACAATCCCGTGAATCCTCCACCGGTAAGTAAAACAGACACAACACAAGCTGCGGCAAAACCAAACCCAGTGAAGGAGAGTAATAGAAATACTAATAATCAAGAGAGAAGTCAATTGGAGGAACGAATCAAAGCAGAGAAGGTAAAAGCTGTGACCTTCAAACGTGCAGGGAAACAAGCTGAGGCATTAGATGCTCTTCGACGGGCAAAACTATATGAAAAGAAGCTAAACGCTCTTGCTTCAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0006897 GO:0007034 GO:0007049 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009057 GO:0009653 GO:0009987 GO:0010927 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030163 GO:0030435 GO:0030437 GO:0031090 GO:0031321 GO:0031410 GO:0031982 GO:0032266 GO:0032502 GO:0032505 GO:0032509 GO:0032511 GO:0032989 GO:0032991 GO:0033036 GO:0033365 GO:0033565 GO:0034293 GO:0034613 GO:0035091 GO:0036211 GO:0036452 GO:0042763 GO:0042764 GO:0042886 GO:0043162 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043328 GO:0043412 GO:0043632 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045184 GO:0045324 GO:0046907 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051321 GO:0051603 GO:0051641 GO:0051649 GO:0051704 GO:0061659 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0120113 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901981 GO:1903046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYVE

Protein Analysis

1171

Amino Acids

128.94

Weight (kDa)

5.63

Isoelectric Point (pI)

48.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FYVE PF01363 21 - 75 2.5e-16 FYVE zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011014)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61690
fragaria_vesca FvH4_3g03041 FvH4_3g03041 FvH4_3g03041
malus_domestica MD05G1335200.v1.1 MD10G1310700.v1.1
prunus_persica Prupe.4G011500_v2.0.a1 Prupe.4G030200_v2.0.a1
pyrus_communis pycom05g30660 pycom10g26170
rosa_chinensis RchiOBHm_Chr5g0004701
rosa_laevigata RLG00000031253
rosa_multiflora Rmu_sc0002210.1_g000004
rosa_roxburghii Rroxscaffold_1G00070860
rosa_rugosa Rorug04G0413400
rosa_samantha Rh5AG041000 Rh5BG040800 Rh5CG044500 Rh5DG040700
rosa_wichuraiana Rw5G003950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 161, 1775
AccBSI CCGCTC 1 cut(s) 1574
AccI GTMKAC 1 cut(s) 2153
AccII CGCG 1 cut(s) 826
AciI CCGC 7 cut(s) 23, 824, 923, 1574, 2229, 3212, 3320
AclWI GGATC 9 cut(s) 1012, 1214, 1227, 1718, 2061, 2473, 2972, 2985, 3224
AcoI YGGCCR 1 cut(s) 2593
AcsI RAATTY 9 cut(s) 501, 797, 819, 954, 1117, 1287, 1816, 2164, 2652
AcuI CTGAAG 2 cut(s) 477, 3147
AcvI CACGTG 1 cut(s) 2735
AdeI CACNNNGTG 1 cut(s) 179
AfaI GTAC 2 cut(s) 497, 1863
AfiI CCNNNNNNNGG 5 cut(s) 613, 1470, 2091, 2398, 3340
AflII CTTAAG 2 cut(s) 881, 2159
AflIII ACRYGT 1 cut(s) 1864
AgeI ACCGGT 2 cut(s) 3196, 3289
AhdI GACNNNNNGTC 1 cut(s) 1609
AjnI CCWGG 3 cut(s) 1222, 1825, 2590
AjuI GAANNNNNNNTTGG 2 cut(s) 2259, 2291
Alw26I GTCTC 6 cut(s) 635, 810, 2535, 2652, 2672, 2902
AlwI GGATC 9 cut(s) 1012, 1214, 1227, 1718, 2061, 2473, 2972, 2985, 3224
AlwNI CAGNNNCTG 1 cut(s) 2420
Ama87I CYCGRG 1 cut(s) 2988
AoxI GGCC 6 cut(s) 573, 1308, 1344, 1635, 2352, 2593
ApoI RAATTY 9 cut(s) 501, 797, 819, 954, 1117, 1287, 1816, 2164, 2652
ArsI GACNNNNNNTTYG 4 cut(s) 1721, 1753, 3017, 3049
AseI ATTAAT 1 cut(s) 1032
AsiGI ACCGGT 2 cut(s) 3196, 3289
Asp700I GAANNNNTTC 1 cut(s) 3222
AspLEI GCGC 1 cut(s) 2717
AspS9I GGNCC 5 cut(s) 1174, 1309, 1787, 2137, 2231
AsuHPI GGTGA 4 cut(s) 186, 200, 1154, 2642
AsuNHI GCTAGC 2 cut(s) 1474, 2374
AvaI CYCGRG 1 cut(s) 2988
AvaII GGWCC 4 cut(s) 1174, 1787, 2137, 2231
AxyI CCTNAGG 1 cut(s) 734
BalI TGGCCA 1 cut(s) 2595
BamHI GGATCC 2 cut(s) 1219, 2977
BanII GRGCYC 1 cut(s) 2751
BarI GAAGNNNNNNTAC 2 cut(s) 479, 511
BauI CACGAG 1 cut(s) 1641
BbrPI CACGTG 1 cut(s) 2735
BbsI GAAGAC 1 cut(s) 851
BbvCI CCTCAGC 2 cut(s) 1968, 3447
BccI CCATC 7 cut(s) 40, 995, 1261, 1682, 2166, 2392, 2608
BceAI ACGGC 1 cut(s) 2728
BciT130I CCWGG 3 cut(s) 1224, 1827, 2592
BciVI GTATCC 1 cut(s) 1435
BclI TGATCA 1 cut(s) 2050
BcoDI GTCTC 6 cut(s) 635, 810, 2535, 2652, 2672, 2902
BfaI CTAG 9 cut(s) 338, 381, 450, 672, 1388, 1428, 1475, 2375, 2499
BfmI CTRYAG 2 cut(s) 1782, 3056
BfoI RGCGCY 1 cut(s) 2718
BfrI CTTAAG 2 cut(s) 881, 2159
BfuAI ACCTGC 2 cut(s) 161, 1775
BfuI GTATCC 1 cut(s) 1435
BglI GCCNNNNNGGC 1 cut(s) 2876
BlpI GCTNAGC 1 cut(s) 2413
Bme1390I CCNGG 3 cut(s) 1224, 1827, 2592
Bme18I GGWCC 4 cut(s) 1174, 1787, 2137, 2231
BmeRI GACNNNNNGTC 1 cut(s) 1609
BmeT110I CYCGRG 1 cut(s) 2988
BmgT120I GGNCC 5 cut(s) 1174, 1309, 1787, 2137, 2231
BmiI GGNNCC 7 cut(s) 151, 605, 1176, 1221, 2139, 2569, 2979
BmrFI CCNGG 3 cut(s) 1224, 1827, 2592
BmrI ACTGGG 3 cut(s) 858, 2745, 3329
BmsI GCATC 6 cut(s) 52, 124, 436, 1731, 2320, 3448
BmtI GCTAGC 2 cut(s) 1478, 2378
BmuI ACTGGG 3 cut(s) 858, 2745, 3329
BoxI GACNNNNGTC 1 cut(s) 864
BpiI GAAGAC 1 cut(s) 851
BplI GAGNNNNNCTC 2 cut(s) 1563, 1595
BpmI CTGGAG 1 cut(s) 2346
Bpu10I CCTNAGC 3 cut(s) 1753, 1968, 3447
Bpu1102I GCTNAGC 1 cut(s) 2413
BpuEI CTTGAG 4 cut(s) 584, 1397, 1830, 2502
BsaAI YACGTR 3 cut(s) 179, 1865, 2735
BsaBI GATNNNNATC 1 cut(s) 1776
BsaI GGTCTC 1 cut(s) 2652
BsaJI CCNNGG 4 cut(s) 1347, 1826, 1877, 2234
BsaWI WCCGGW 3 cut(s) 606, 3196, 3289
BsaXI ACNNNNNCTCC 6 cut(s) 731, 761, 2534, 2564, 3094, 3124
Bsc4I CCNNNNNNNGG 5 cut(s) 613, 1470, 2091, 2398, 3340
Bse118I RCCGGY 2 cut(s) 3196, 3289
Bse1I ACTGG 8 cut(s) 853, 975, 2329, 2355, 2388, 2632, 2751, 3335
Bse21I CCTNAGG 1 cut(s) 734
Bse3DI GCAATG 3 cut(s) 118, 2879, 3036
Bse8I GATNNNNATC 1 cut(s) 1776
BseBI CCWGG 3 cut(s) 1224, 1827, 2592
BseDI CCNNGG 4 cut(s) 1347, 1826, 1877, 2234
BseJI GATNNNNATC 1 cut(s) 1776
BseLI CCNNNNNNNGG 5 cut(s) 613, 1470, 2091, 2398, 3340
BseMI GCAATG 3 cut(s) 118, 2879, 3036
BseNI ACTGG 8 cut(s) 853, 975, 2329, 2355, 2388, 2632, 2751, 3335
BseRI GAGGAG 6 cut(s) 1449, 1727, 2118, 2505, 2778, 2920
BseYI CCCAGC 2 cut(s) 1177, 2140
BsgI GTGCAG 5 cut(s) 139, 222, 1008, 2240, 3453
Bsh1236I CGCG 1 cut(s) 826
BshFI GGCC 6 cut(s) 575, 1310, 1346, 1637, 2354, 2595
BshTI ACCGGT 2 cut(s) 3196, 3289
BsiHKCI CYCGRG 1 cut(s) 2988
BsiSI CCGG 4 cut(s) 124, 607, 3197, 3290
BslFI GGGAC 1 cut(s) 2271
BslI CCNNNNNNNGG 5 cut(s) 613, 1470, 2091, 2398, 3340
BsmAI GTCTC 6 cut(s) 635, 810, 2535, 2652, 2672, 2902
BsmBI CGTCTC 2 cut(s) 635, 810
BsmFI GGGAC 1 cut(s) 2271
BsmI GAATGC 2 cut(s) 400, 2635
BsnI GGCC 6 cut(s) 575, 1310, 1346, 1637, 2354, 2595
Bso31I GGTCTC 1 cut(s) 2652
BsoBI CYCGRG 1 cut(s) 2988
Bsp1286I GDGCHC 1 cut(s) 2751
Bsp1720I GCTNAGC 1 cut(s) 2413
Bsp19I CCATGG 1 cut(s) 1347
BspACI CCGC 7 cut(s) 23, 824, 923, 1574, 2229, 3212, 3320
BspANI GGCC 6 cut(s) 575, 1310, 1346, 1637, 2354, 2595
BspFNI CGCG 1 cut(s) 826
BspLI GGNNCC 7 cut(s) 151, 605, 1176, 1221, 2139, 2569, 2979
BspMAI CTGCAG 2 cut(s) 1786, 3060
BspMI ACCTGC 2 cut(s) 161, 1775
BspOI GCTAGC 2 cut(s) 1478, 2378
BspPI GGATC 9 cut(s) 1012, 1214, 1227, 1718, 2061, 2473, 2972, 2985, 3224
BspQI GCTCTTC 2 cut(s) 969, 3468
BspTI CTTAAG 2 cut(s) 881, 2159
BspTNI GGTCTC 1 cut(s) 2652
BsrBI CCGCTC 1 cut(s) 1574
BsrDI GCAATG 3 cut(s) 118, 2879, 3036
BsrFI RCCGGY 2 cut(s) 3196, 3289
BsrI ACTGG 8 cut(s) 853, 975, 2329, 2355, 2388, 2632, 2751, 3335
BssAI RCCGGY 2 cut(s) 3196, 3289
BssECI CCNNGG 4 cut(s) 1347, 1826, 1877, 2234
BssSI CACGAG 1 cut(s) 1641
BssT1I CCWWGG 2 cut(s) 1347, 1877
Bst2BI CACGAG 1 cut(s) 1641
Bst2UI CCWGG 3 cut(s) 1224, 1827, 2592
Bst4CI ACNGT 8 cut(s) 243, 304, 621, 1417, 2048, 2090, 2348, 3047
Bst6I CTCTTC 4 cut(s) 813, 969, 2733, 3468
BstAFI CTTAAG 2 cut(s) 881, 2159
BstAPI GCANNNNNTGC 2 cut(s) 1187, 3458
BstBAI YACGTR 3 cut(s) 179, 1865, 2735
BstC8I GCNNGC 6 cut(s) 113, 921, 1472, 1476, 2376, 2597
BstDSI CCRYGG 2 cut(s) 1347, 2234
BstFNI CGCG 1 cut(s) 826
BstH2I RGCGCY 1 cut(s) 2718
BstHHI GCGC 1 cut(s) 2717
BstMAI GTCTC 6 cut(s) 635, 810, 2535, 2652, 2672, 2902
BstNI CCWGG 3 cut(s) 1224, 1827, 2592
BstPAI GACNNNNGTC 1 cut(s) 864
BstSCI CCNGG 3 cut(s) 1222, 1825, 2590
BstSFI CTRYAG 2 cut(s) 1782, 3056
BstUI CGCG 1 cut(s) 826
BstV2I GAAGAC 1 cut(s) 851
BstX2I RGATCY 2 cut(s) 1219, 2977
BstXI CCANNNNNNTGG 1 cut(s) 2362
BstYI RGATCY 2 cut(s) 1219, 2977
Bsu36I CCTNAGG 1 cut(s) 734
BsuI GTATCC 1 cut(s) 1435
BsuRI GGCC 6 cut(s) 575, 1310, 1346, 1637, 2354, 2595
BtgI CCRYGG 2 cut(s) 1347, 2234
BtsI GCAGTG 1 cut(s) 1506
BtsIMutI CAGTG 5 cut(s) 334, 1506, 2053, 2362, 3342
BveI ACCTGC 2 cut(s) 161, 1775
Cac8I GCNNGC 6 cut(s) 113, 921, 1472, 1476, 2376, 2597
CaiI CAGNNNCTG 1 cut(s) 2420
CfoI GCGC 1 cut(s) 2717
Cfr10I RCCGGY 2 cut(s) 3196, 3289
Cfr13I GGNCC 5 cut(s) 1174, 1309, 1787, 2137, 2231
CseI GACGC 4 cut(s) 242, 587, 652, 2300
Csp6I GTAC 2 cut(s) 496, 1862
CspAI ACCGGT 2 cut(s) 3196, 3289
CviQI GTAC 2 cut(s) 496, 1862
DraIII CACNNNGTG 1 cut(s) 179
DriI GACNNNNNGTC 1 cut(s) 1609
EaeI YGGCCR 1 cut(s) 2593
Eam1104I CTCTTC 4 cut(s) 813, 969, 2733, 3468
Eam1105I GACNNNNNGTC 1 cut(s) 1609
EarI CTCTTC 4 cut(s) 813, 969, 2733, 3468
Eco130I CCWWGG 2 cut(s) 1347, 1877
Eco24I GRGCYC 1 cut(s) 2751
Eco31I GGTCTC 1 cut(s) 2652
Eco32I GATATC 1 cut(s) 591
Eco47I GGWCC 4 cut(s) 1174, 1787, 2137, 2231
Eco57I CTGAAG 2 cut(s) 477, 3147
Eco72I CACGTG 1 cut(s) 2735
Eco81I CCTNAGG 1 cut(s) 734
Eco88I CYCGRG 1 cut(s) 2988
EcoO109I RGGNCCY 4 cut(s) 1174, 1309, 1787, 2137
EcoRI GAATTC 1 cut(s) 501
EcoRII CCWGG 3 cut(s) 1222, 1825, 2590
EcoRV GATATC 1 cut(s) 591
EcoT14I CCWWGG 2 cut(s) 1347, 1877
EcoT38I GRGCYC 1 cut(s) 2751
ErhI CCWWGG 2 cut(s) 1347, 1877
Esp3I CGTCTC 2 cut(s) 635, 810
FalI AAGNNNNNCTT 6 cut(s) 903, 935, 1479, 1511, 1915, 1947
FaqI GGGAC 1 cut(s) 2271
FauNDI CATATG 1 cut(s) 1855
FbaI TGATCA 1 cut(s) 2050
FblI GTMKAC 1 cut(s) 2153
FriOI GRGCYC 1 cut(s) 2751
FspBI CTAG 9 cut(s) 338, 381, 450, 672, 1388, 1428, 1475, 2375, 2499
GlaI GCGC 1 cut(s) 2716
GsaI CCCAGC 2 cut(s) 1181, 2144
GsuI CTGGAG 1 cut(s) 2346
HaeII RGCGCY 1 cut(s) 2718
HaeIII GGCC 6 cut(s) 575, 1310, 1346, 1637, 2354, 2595
HapII CCGG 4 cut(s) 124, 607, 3197, 3290
HgaI GACGC 4 cut(s) 242, 587, 652, 2300
HhaI GCGC 1 cut(s) 2717
Hin6I GCGC 1 cut(s) 2715
HinP1I GCGC 1 cut(s) 2715
HincII GTYRAC 2 cut(s) 1420, 2154
HindII GTYRAC 2 cut(s) 1420, 2154
HindIII AAGCTT 3 cut(s) 917, 2202, 3095
HpaII CCGG 4 cut(s) 124, 607, 3197, 3290
HphI GGTGA 4 cut(s) 186, 200, 1154, 2642
Hpy166II GTNNAC 8 cut(s) 182, 212, 470, 1243, 1420, 2154, 2234, 3202
Hpy8I GTNNAC 8 cut(s) 182, 212, 470, 1243, 1420, 2154, 2234, 3202
Hpy99I CGWCG 3 cut(s) 581, 1947, 3471
HpyCH4III ACNGT 8 cut(s) 243, 304, 621, 1417, 2048, 2090, 2348, 3047
HpyCH4IV ACGT 7 cut(s) 178, 694, 907, 1864, 2734, 3082, 3430
HpySE526I ACGT 7 cut(s) 178, 694, 907, 1864, 2734, 3082, 3430
HspAI GCGC 1 cut(s) 2715
Ksp22I TGATCA 1 cut(s) 2050
LguI GCTCTTC 2 cut(s) 969, 3468
LmnI GCTCC 5 cut(s) 739, 995, 1571, 2518, 3025
LweI GCATC 6 cut(s) 52, 124, 436, 1731, 2320, 3448
MaeI CTAG 9 cut(s) 338, 381, 450, 672, 1388, 1428, 1475, 2375, 2499
MaeII ACGT 7 cut(s) 178, 694, 907, 1864, 2734, 3082, 3430
MbiI CCGCTC 1 cut(s) 1574
MfeI CAATTG 2 cut(s) 3164, 3380
MflI RGATCY 2 cut(s) 1219, 2977
MhlI GDGCHC 1 cut(s) 2751
MlsI TGGCCA 1 cut(s) 2595
MluNI TGGCCA 1 cut(s) 2595
MlyI GAGTC 6 cut(s) 185, 874, 1456, 2149, 2750, 3074
MmeI TCCRAC 5 cut(s) 423, 1190, 1739, 2443, 2880
Mox20I TGGCCA 1 cut(s) 2595
MroXI GAANNNNTTC 1 cut(s) 3222
MscI TGGCCA 1 cut(s) 2595
MslI CAYNNNNRTG 1 cut(s) 1236
Msp20I TGGCCA 1 cut(s) 2595
MspA1I CMGCKG 1 cut(s) 728
MspCI CTTAAG 2 cut(s) 881, 2159
MspI CCGG 4 cut(s) 124, 607, 3197, 3290
MspR9I CCNGG 3 cut(s) 1224, 1827, 2592
MunI CAATTG 2 cut(s) 3164, 3380
Mva1269I GAATGC 2 cut(s) 400, 2635
MvaI CCWGG 3 cut(s) 1224, 1827, 2592
MvnI CGCG 1 cut(s) 826
NcoI CCATGG 1 cut(s) 1347
NdeI CATATG 1 cut(s) 1855
NheI GCTAGC 2 cut(s) 1474, 2374
NlaIV GGNNCC 7 cut(s) 151, 605, 1176, 1221, 2139, 2569, 2979
NmuCI GTSAC 7 cut(s) 171, 188, 1153, 3041, 3066, 3074, 3418
PaeR7I CTCGAG 1 cut(s) 2988
PciSI GCTCTTC 2 cut(s) 969, 3468
PctI GAATGC 2 cut(s) 400, 2635
PdmI GAANNNNTTC 1 cut(s) 3222
PflFI GACNNNGTC 1 cut(s) 2683
PfoI TCCNGGA 1 cut(s) 1222
PinAI ACCGGT 2 cut(s) 3196, 3289
PleI GAGTC 6 cut(s) 185, 873, 1455, 2149, 2749, 3073
PmaCI CACGTG 1 cut(s) 2735
PmlI CACGTG 1 cut(s) 2735
PpsI GAGTC 6 cut(s) 185, 873, 1455, 2149, 2749, 3073
Ppu21I YACGTR 3 cut(s) 179, 1865, 2735
PpuMI RGGWCCY 3 cut(s) 1174, 1787, 2137
PshAI GACNNNNGTC 1 cut(s) 864
PshBI ATTAAT 1 cut(s) 1032
Psp5II RGGWCCY 3 cut(s) 1174, 1787, 2137
Psp6I CCWGG 3 cut(s) 1222, 1825, 2590
PspCI CACGTG 1 cut(s) 2735
PspFI CCCAGC 2 cut(s) 1177, 2140
PspGI CCWGG 3 cut(s) 1222, 1825, 2590
PspN4I GGNNCC 7 cut(s) 151, 605, 1176, 1221, 2139, 2569, 2979
PspPI GGNCC 5 cut(s) 1174, 1309, 1787, 2137, 2231
PspPPI RGGWCCY 3 cut(s) 1174, 1787, 2137
PstI CTGCAG 2 cut(s) 1786, 3060
PstNI CAGNNNCTG 1 cut(s) 2420
PsuI RGATCY 2 cut(s) 1219, 2977
PsyI GACNNNGTC 1 cut(s) 2683
PvuII CAGCTG 1 cut(s) 728
RsaI GTAC 2 cut(s) 497, 1863
RsaNI GTAC 2 cut(s) 496, 1862
RseI CAYNNNNRTG 1 cut(s) 1236
SalI GTCGAC 1 cut(s) 2152
SapI GCTCTTC 2 cut(s) 969, 3468
Sau96I GGNCC 5 cut(s) 1174, 1309, 1787, 2137, 2231
SbfI CCTGCAGG 1 cut(s) 1786
SchI GAGTC 6 cut(s) 185, 874, 1456, 2149, 2750, 3074
ScrFI CCNGG 3 cut(s) 1224, 1827, 2592
SdaI CCTGCAGG 1 cut(s) 1786
SduI GDGCHC 1 cut(s) 2751
SfaNI GCATC 6 cut(s) 52, 124, 436, 1731, 2320, 3448
SfcI CTRYAG 2 cut(s) 1782, 3056
Sfr274I CTCGAG 1 cut(s) 2988
SinI GGWCC 4 cut(s) 1174, 1787, 2137, 2231
SlaI CTCGAG 1 cut(s) 2988
SmiMI CAYNNNNRTG 1 cut(s) 1236
SmlI CTYRAG 7 cut(s) 563, 881, 1376, 1845, 2159, 2517, 2988
SmoI CTYRAG 7 cut(s) 563, 881, 1376, 1845, 2159, 2517, 2988
Sse8387I CCTGCAGG 1 cut(s) 1786
SsiI CCGC 7 cut(s) 23, 824, 923, 1574, 2229, 3212, 3320
SspI AATATT 1 cut(s) 1995
SspMI CTAG 9 cut(s) 338, 381, 450, 672, 1388, 1428, 1475, 2375, 2499
StyD4I CCNGG 3 cut(s) 1222, 1825, 2590
StyI CCWWGG 2 cut(s) 1347, 1877
TaaI ACNGT 8 cut(s) 243, 304, 621, 1417, 2048, 2090, 2348, 3047
TaiI ACGT 7 cut(s) 181, 697, 910, 1867, 2737, 3085, 3433
TatI WGTACW 1 cut(s) 495
TauI GCSGC 1 cut(s) 3323
TscAI CASTG 5 cut(s) 334, 1506, 2053, 2362, 3342
TseFI GTSAC 7 cut(s) 171, 188, 1153, 3041, 3066, 3074, 3418
Tsp45I GTSAC 7 cut(s) 171, 188, 1153, 3041, 3066, 3074, 3418
TspGWI ACGGA 3 cut(s) 803, 2251, 2987
TspRI CASTG 5 cut(s) 334, 1506, 2053, 2362, 3342
Tth111I GACNNNGTC 1 cut(s) 2683
Vha464I CTTAAG 2 cut(s) 881, 2159
VpaK11BI GGWCC 4 cut(s) 1174, 1787, 2137, 2231
VspI ATTAAT 1 cut(s) 1032
XapI RAATTY 9 cut(s) 501, 797, 819, 954, 1117, 1287, 1816, 2164, 2652
XhoI CTCGAG 1 cut(s) 2988
XmiI GTMKAC 1 cut(s) 2153
XmnI GAANNNNTTC 1 cut(s) 3222
XspI CTAG 9 cut(s) 338, 381, 450, 672, 1388, 1428, 1475, 2375, 2499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.