Protein present in Fab1, YOTB, Vac1, and EEA1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61690 |
| fragaria_vesca | FvH4_3g03041 FvH4_3g03041 FvH4_3g03041 |
| malus_domestica | MD05G1335200.v1.1 MD10G1310700.v1.1 |
| prunus_persica | Prupe.4G011500_v2.0.a1 Prupe.4G030200_v2.0.a1 |
| pyrus_communis | pycom05g30660 pycom10g26170 |
| rosa_chinensis | RchiOBHm_Chr5g0004701 |
| rosa_laevigata | RLG00000031253 |
| rosa_multiflora | Rmu_sc0002210.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00070860 |
| rosa_rugosa | Rorug04G0413400 |
| rosa_samantha | Rh5AG041000 Rh5BG040800 Rh5CG044500 Rh5DG040700 |
| rosa_wichuraiana | Rw5G003950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 1403, 1615, 3130 |
| AccB1I | GGYRCC | 1 cut(s) | 2112 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2179 |
| AccI | GTMKAC | 1 cut(s) | 60 |
| AciI | CCGC | 5 cut(s) | 1408, 3059, 3463, 3488, 3776 |
| AclWI | GGATC | 7 cut(s) | 520, 837, 1877, 2050, 2531, 3369, 3602 |
| AcoI | YGGCCR | 3 cut(s) | 1074, 3352, 3507 |
| AcuI | CTGAAG | 7 cut(s) | 717, 1007, 1104, 1722, 1733, 2286, 2781 |
| AcyI | GRCGYC | 3 cut(s) | 63, 2085, 2113 |
| AfaI | GTAC | 3 cut(s) | 85, 2031, 2463 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 448, 770, 2179 |
| AjiI | CACGTC | 1 cut(s) | 1594 |
| AjnI | CCWGG | 7 cut(s) | 951, 1665, 1780, 2115, 3003, 3162, 3673 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1879, 1911, 3132, 3164 |
| Alw26I | GTCTC | 6 cut(s) | 244, 1302, 1848, 2117, 3435, 3592 |
| AlwI | GGATC | 7 cut(s) | 520, 837, 1877, 2050, 2531, 3369, 3602 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 740 |
| Ama87I | CYCGRG | 3 cut(s) | 2013, 2555, 3219 |
| AoxI | GGCC | 9 cut(s) | 396, 728, 1074, 1958, 3352, 3507, 3670, 3810, 3831 |
| ApeKI | GCWGC | 8 cut(s) | 153, 236, 1202, 1274, 1340, 2702, 2975, 3460 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1166, 1198, 3380, 3412 |
| AseI | ATTAAT | 3 cut(s) | 1112, 1625, 2301 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 472, 2338 |
| AspLEI | GCGC | 1 cut(s) | 2115 |
| AsuC2I | CCSGG | 3 cut(s) | 1262, 1957, 2021 |
| AsuHPI | GGTGA | 8 cut(s) | 88, 200, 518, 1580, 2009, 2288, 2390, 3363 |
| AsuII | TTCGAA | 2 cut(s) | 2491, 3869 |
| AsuNHI | GCTAGC | 1 cut(s) | 3029 |
| AvaI | CYCGRG | 3 cut(s) | 2013, 2555, 3219 |
| AvaII | GGWCC | 7 cut(s) | 819, 1468, 1801, 2170, 2625, 2645, 3382 |
| AxyI | CCTNAGG | 2 cut(s) | 306, 525 |
| BaeGI | GKGCMC | 1 cut(s) | 261 |
| BalI | TGGCCA | 2 cut(s) | 3354, 3509 |
| BanI | GGYRCC | 1 cut(s) | 2112 |
| BanII | GRGCYC | 4 cut(s) | 489, 2020, 2984, 3004 |
| BbsI | GAAGAC | 3 cut(s) | 1263, 3593, 3685 |
| BbvCI | CCTCAGC | 2 cut(s) | 2454, 3807 |
| BbvI | GCAGC | 8 cut(s) | 140, 248, 1189, 1261, 1327, 2714, 2962, 3447 |
| BciT130I | CCWGG | 7 cut(s) | 953, 1667, 1782, 2117, 3005, 3164, 3675 |
| BclI | TGATCA | 2 cut(s) | 1210, 3075 |
| BcnI | CCSGG | 3 cut(s) | 1262, 1957, 2021 |
| BcoDI | GTCTC | 6 cut(s) | 244, 1302, 1848, 2117, 3435, 3592 |
| BfaI | CTAG | 6 cut(s) | 227, 267, 384, 2483, 3030, 3654 |
| BfmI | CTRYAG | 2 cut(s) | 594, 1608 |
| BfoI | RGCGCY | 1 cut(s) | 2116 |
| BfuAI | ACCTGC | 3 cut(s) | 1403, 1615, 3130 |
| BglII | AGATCT | 1 cut(s) | 3022 |
| BisI | GCNGC | 8 cut(s) | 154, 237, 1203, 1275, 1341, 2703, 2976, 3461 |
| BlsI | GCNGC | 8 cut(s) | 155, 238, 1204, 1276, 1342, 2704, 2977, 3462 |
| BmcAI | AGTACT | 1 cut(s) | 2463 |
| Bme18I | GGWCC | 7 cut(s) | 819, 1468, 1801, 2170, 2625, 2645, 3382 |
| BmeT110I | CYCGRG | 3 cut(s) | 2013, 2555, 3219 |
| BmgBI | CACGTC | 1 cut(s) | 1594 |
| BmiI | GGNNCC | 9 cut(s) | 1469, 1803, 2114, 2335, 2646, 2968, 3001, 3120, 3384 |
| BmsI | GCATC | 7 cut(s) | 124, 419, 1831, 2497, 3082, 3265, 3808 |
| BmtI | GCTAGC | 1 cut(s) | 3033 |
| BoxI | GACNNNNGTC | 1 cut(s) | 361 |
| BpiI | GAAGAC | 3 cut(s) | 1263, 3593, 3685 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2321, 2353 |
| BpmI | CTGGAG | 5 cut(s) | 750, 1473, 2058, 2799, 2926 |
| Bpu10I | CCTNAGC | 4 cut(s) | 2454, 2475, 3543, 3807 |
| Bpu14I | TTCGAA | 2 cut(s) | 2491, 3869 |
| BpuEI | CTTGAG | 5 cut(s) | 653, 1284, 1751, 3281, 3651 |
| BpuMI | CCSGG | 3 cut(s) | 1262, 1957, 2021 |
| BsaAI | YACGTR | 1 cut(s) | 179 |
| BsaBI | GATNNNNATC | 1 cut(s) | 828 |
| BsaHI | GRCGYC | 3 cut(s) | 63, 2085, 2113 |
| BsaI | GGTCTC | 1 cut(s) | 1302 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 448, 770, 2179 |
| Bse118I | RCCGGY | 1 cut(s) | 22 |
| Bse1I | ACTGG | 9 cut(s) | 399, 767, 1835, 2037, 2780, 2909, 2992, 3399, 3522 |
| Bse21I | CCTNAGG | 2 cut(s) | 306, 525 |
| Bse3DI | GCAATG | 7 cut(s) | 118, 706, 1437, 1504, 1782, 2774, 3345 |
| Bse8I | GATNNNNATC | 1 cut(s) | 828 |
| BseBI | CCWGG | 7 cut(s) | 953, 1667, 1782, 2117, 3005, 3164, 3675 |
| BseJI | GATNNNNATC | 1 cut(s) | 828 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 448, 770, 2179 |
| BseMI | GCAATG | 7 cut(s) | 118, 706, 1437, 1504, 1782, 2774, 3345 |
| BseNI | ACTGG | 9 cut(s) | 399, 767, 1835, 2037, 2780, 2909, 2992, 3399, 3522 |
| BseRI | GAGGAG | 3 cut(s) | 542, 753, 2144 |
| BseSI | GKGCMC | 1 cut(s) | 261 |
| BseXI | GCAGC | 8 cut(s) | 140, 248, 1189, 1261, 1327, 2714, 2962, 3447 |
| BseYI | CCCAGC | 3 cut(s) | 159, 272, 2314 |
| BsgI | GTGCAG | 3 cut(s) | 139, 2346, 3813 |
| BshFI | GGCC | 9 cut(s) | 398, 730, 1076, 1960, 3354, 3509, 3672, 3812, 3833 |
| BshNI | GGYRCC | 1 cut(s) | 2112 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2013, 2555, 3219 |
| BsiSI | CCGG | 6 cut(s) | 23, 124, 1262, 1957, 2021, 2835 |
| BslFI | GGGAC | 4 cut(s) | 1481, 1787, 1798, 2839 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 448, 770, 2179 |
| BsmAI | GTCTC | 6 cut(s) | 244, 1302, 1848, 2117, 3435, 3592 |
| BsmFI | GGGAC | 4 cut(s) | 1481, 1787, 1798, 2839 |
| BsnI | GGCC | 9 cut(s) | 398, 730, 1076, 1960, 3354, 3509, 3672, 3812, 3833 |
| Bso31I | GGTCTC | 1 cut(s) | 1302 |
| BsoBI | CYCGRG | 3 cut(s) | 2013, 2555, 3219 |
| Bsp119I | TTCGAA | 2 cut(s) | 2491, 3869 |
| Bsp1286I | GDGCHC | 5 cut(s) | 261, 489, 2020, 2984, 3004 |
| BspACI | CCGC | 5 cut(s) | 1408, 3059, 3463, 3488, 3776 |
| BspANI | GGCC | 9 cut(s) | 398, 730, 1076, 1960, 3354, 3509, 3672, 3812, 3833 |
| BspLI | GGNNCC | 9 cut(s) | 1469, 1803, 2114, 2335, 2646, 2968, 3001, 3120, 3384 |
| BspMAI | CTGCAG | 2 cut(s) | 598, 1612 |
| BspMI | ACCTGC | 3 cut(s) | 1403, 1615, 3130 |
| BspOI | GCTAGC | 1 cut(s) | 3033 |
| BspPI | GGATC | 7 cut(s) | 520, 837, 1877, 2050, 2531, 3369, 3602 |
| BspQI | GCTCTTC | 1 cut(s) | 3828 |
| BspT104I | TTCGAA | 2 cut(s) | 2491, 3869 |
| BspT107I | GGYRCC | 1 cut(s) | 2112 |
| BspTNI | GGTCTC | 1 cut(s) | 1302 |
| BsrDI | GCAATG | 7 cut(s) | 118, 706, 1437, 1504, 1782, 2774, 3345 |
| BsrFI | RCCGGY | 1 cut(s) | 22 |
| BsrI | ACTGG | 9 cut(s) | 399, 767, 1835, 2037, 2780, 2909, 2992, 3399, 3522 |
| BssAI | RCCGGY | 1 cut(s) | 22 |
| BssNI | GRCGYC | 3 cut(s) | 63, 2085, 2113 |
| BssT1I | CCWWGG | 5 cut(s) | 1014, 1989, 3378, 3510, 3813 |
| Bst2UI | CCWGG | 7 cut(s) | 953, 1667, 1782, 2117, 3005, 3164, 3675 |
| Bst4CI | ACNGT | 6 cut(s) | 74, 371, 2754, 3070, 3559, 3621 |
| Bst6I | CTCTTC | 8 cut(s) | 837, 894, 1610, 2262, 2344, 2541, 3080, 3828 |
| BstACI | GRCGYC | 3 cut(s) | 63, 2085, 2113 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 153 |
| BstBAI | YACGTR | 1 cut(s) | 179 |
| BstBI | TTCGAA | 2 cut(s) | 2491, 3869 |
| BstDSI | CCRYGG | 1 cut(s) | 2925 |
| BstH2I | RGCGCY | 1 cut(s) | 2116 |
| BstHHI | GCGC | 1 cut(s) | 2115 |
| BstMAI | GTCTC | 6 cut(s) | 244, 1302, 1848, 2117, 3435, 3592 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 28, 153, 608, 637, 1966, 2360, 3101, 3632, 3818 |
| BstNI | CCWGG | 7 cut(s) | 953, 1667, 1782, 2117, 3005, 3164, 3675 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 361 |
| BstSFI | CTRYAG | 2 cut(s) | 594, 1608 |
| BstSLI | GKGCMC | 1 cut(s) | 261 |
| BstV1I | GCAGC | 8 cut(s) | 140, 248, 1189, 1261, 1327, 2714, 2962, 3447 |
| BstV2I | GAAGAC | 3 cut(s) | 1263, 3593, 3685 |
| BstX2I | RGATCY | 3 cut(s) | 512, 829, 3022 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2995, 3517 |
| BstYI | RGATCY | 3 cut(s) | 512, 829, 3022 |
| Bsu36I | CCTNAGG | 2 cut(s) | 306, 525 |
| BsuRI | GGCC | 9 cut(s) | 398, 730, 1076, 1960, 3354, 3509, 3672, 3812, 3833 |
| BtgI | CCRYGG | 1 cut(s) | 2925 |
| BtrI | CACGTC | 1 cut(s) | 1594 |
| BtsI | GCAGTG | 2 cut(s) | 412, 2646 |
| BveI | ACCTGC | 3 cut(s) | 1403, 1615, 3130 |
| CaiI | CAGNNNCTG | 1 cut(s) | 740 |
| CfoI | GCGC | 1 cut(s) | 2115 |
| Cfr10I | RCCGGY | 1 cut(s) | 22 |
| CseI | GACGC | 6 cut(s) | 71, 524, 656, 1724, 2074, 2513 |
| Csp6I | GTAC | 3 cut(s) | 84, 2030, 2462 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1975, 2010, 3541, 3576 |
| CviAII | CATG | 7 cut(s) | 254, 982, 1817, 1880, 2531, 2699, 3365 |
| CviQI | GTAC | 3 cut(s) | 84, 2030, 2462 |
| DinI | GGCGCC | 1 cut(s) | 2114 |
| DraI | TTTAAA | 2 cut(s) | 2406, 3192 |
| EaeI | YGGCCR | 3 cut(s) | 1074, 3352, 3507 |
| Eam1104I | CTCTTC | 8 cut(s) | 837, 894, 1610, 2262, 2344, 2541, 3080, 3828 |
| EarI | CTCTTC | 8 cut(s) | 837, 894, 1610, 2262, 2344, 2541, 3080, 3828 |
| Eco130I | CCWWGG | 5 cut(s) | 1014, 1989, 3378, 3510, 3813 |
| Eco147I | AGGCCT | 1 cut(s) | 3812 |
| Eco24I | GRGCYC | 4 cut(s) | 489, 2020, 2984, 3004 |
| Eco31I | GGTCTC | 1 cut(s) | 1302 |
| Eco47I | GGWCC | 7 cut(s) | 819, 1468, 1801, 2170, 2625, 2645, 3382 |
| Eco57I | CTGAAG | 7 cut(s) | 717, 1007, 1104, 1722, 1733, 2286, 2781 |
| Eco81I | CCTNAGG | 2 cut(s) | 306, 525 |
| Eco88I | CYCGRG | 3 cut(s) | 2013, 2555, 3219 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1468, 1801, 3671 |
| EcoRI | GAATTC | 2 cut(s) | 1067, 3856 |
| EcoRII | CCWGG | 7 cut(s) | 951, 1665, 1780, 2115, 3003, 3162, 3673 |
| EcoT14I | CCWWGG | 5 cut(s) | 1014, 1989, 3378, 3510, 3813 |
| EcoT22I | ATGCAT | 1 cut(s) | 1881 |
| EcoT38I | GRGCYC | 4 cut(s) | 489, 2020, 2984, 3004 |
| EgeI | GGCGCC | 1 cut(s) | 2114 |
| EheI | GGCGCC | 1 cut(s) | 2114 |
| ErhI | CCWWGG | 5 cut(s) | 1014, 1989, 3378, 3510, 3813 |
| FaeI | CATG | 7 cut(s) | 257, 985, 1820, 1883, 2534, 2702, 3368 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 774, 806 |
| FaqI | GGGAC | 4 cut(s) | 1481, 1787, 1798, 2839 |
| FatI | CATG | 7 cut(s) | 253, 981, 1816, 1879, 2530, 2698, 3364 |
| FauI | CCCGC | 1 cut(s) | 1401 |
| FbaI | TGATCA | 2 cut(s) | 1210, 3075 |
| FblI | GTMKAC | 1 cut(s) | 60 |
| Fnu4HI | GCNGC | 8 cut(s) | 154, 237, 1203, 1275, 1341, 2703, 2976, 3461 |
| FriOI | GRGCYC | 4 cut(s) | 489, 2020, 2984, 3004 |
| Fsp4HI | GCNGC | 8 cut(s) | 154, 237, 1203, 1275, 1341, 2703, 2976, 3461 |
| FspBI | CTAG | 6 cut(s) | 227, 267, 384, 2483, 3030, 3654 |
| GlaI | GCGC | 1 cut(s) | 2114 |
| GluI | GCNGC | 8 cut(s) | 154, 237, 1203, 1275, 1341, 2703, 2976, 3461 |
| GsaI | CCCAGC | 3 cut(s) | 163, 276, 2318 |
| GsuI | CTGGAG | 5 cut(s) | 750, 1473, 2058, 2799, 2926 |
| HaeII | RGCGCY | 1 cut(s) | 2116 |
| HaeIII | GGCC | 9 cut(s) | 398, 730, 1076, 1960, 3354, 3509, 3672, 3812, 3833 |
| HapII | CCGG | 6 cut(s) | 23, 124, 1262, 1957, 2021, 2835 |
| HgaI | GACGC | 6 cut(s) | 71, 524, 656, 1724, 2074, 2513 |
| HhaI | GCGC | 1 cut(s) | 2115 |
| Hin1I | GRCGYC | 3 cut(s) | 63, 2085, 2113 |
| Hin1II | CATG | 7 cut(s) | 257, 985, 1820, 1883, 2534, 2702, 3368 |
| Hin6I | GCGC | 1 cut(s) | 2113 |
| HinP1I | GCGC | 1 cut(s) | 2113 |
| HincII | GTYRAC | 5 cut(s) | 61, 294, 1348, 2892, 3562 |
| HindII | GTYRAC | 5 cut(s) | 61, 294, 1348, 2892, 3562 |
| HindIII | AAGCTT | 1 cut(s) | 543 |
| HpaII | CCGG | 6 cut(s) | 23, 124, 1262, 1957, 2021, 2835 |
| HphI | GGTGA | 8 cut(s) | 88, 200, 518, 1580, 2009, 2288, 2390, 3363 |
| Hpy99I | CGWCG | 1 cut(s) | 65 |
| HpyCH4III | ACNGT | 6 cut(s) | 74, 371, 2754, 3070, 3559, 3621 |
| HpyCH4IV | ACGT | 5 cut(s) | 178, 1593, 2431, 3445, 3790 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 28, 153, 608, 637, 1966, 2360, 3101, 3632, 3818 |
| HpySE526I | ACGT | 5 cut(s) | 178, 1593, 2431, 3445, 3790 |
| Hsp92I | GRCGYC | 3 cut(s) | 63, 2085, 2113 |
| Hsp92II | CATG | 7 cut(s) | 257, 985, 1820, 1883, 2534, 2702, 3368 |
| HspAI | GCGC | 1 cut(s) | 2113 |
| KasI | GGCGCC | 1 cut(s) | 2112 |
| KroI | GCCGGC | 1 cut(s) | 22 |
| KroNI | GCCGGC | 1 cut(s) | 24 |
| Ksp22I | TGATCA | 2 cut(s) | 1210, 3075 |
| LguI | GCTCTTC | 1 cut(s) | 3828 |
| LmnI | GCTCC | 2 cut(s) | 628, 2999 |
| Lsp1109I | GCAGC | 8 cut(s) | 140, 248, 1189, 1261, 1327, 2714, 2962, 3447 |
| LweI | GCATC | 7 cut(s) | 124, 419, 1831, 2497, 3082, 3265, 3808 |
| MaeI | CTAG | 6 cut(s) | 227, 267, 384, 2483, 3030, 3654 |
| MaeII | ACGT | 5 cut(s) | 178, 1593, 2431, 3445, 3790 |
| MaeIII | GTNAC | 9 cut(s) | 757, 836, 1237, 1420, 1812, 1861, 2008, 2290, 3437 |
| MfeI | CAATTG | 2 cut(s) | 2649, 3636 |
| MflI | RGATCY | 3 cut(s) | 512, 829, 3022 |
| MhlI | GDGCHC | 5 cut(s) | 261, 489, 2020, 2984, 3004 |
| MlsI | TGGCCA | 2 cut(s) | 3354, 3509 |
| MluNI | TGGCCA | 2 cut(s) | 3354, 3509 |
| Mly113I | GGCGCC | 1 cut(s) | 2113 |
| MlyI | GAGTC | 4 cut(s) | 371, 1478, 2951, 3437 |
| MmeI | TCCRAC | 4 cut(s) | 1910, 3228, 3455, 3510 |
| Mox20I | TGGCCA | 2 cut(s) | 3354, 3509 |
| Mph1103I | ATGCAT | 1 cut(s) | 1881 |
| MroNI | GCCGGC | 1 cut(s) | 22 |
| MroXI | GAANNNNTTC | 2 cut(s) | 472, 2338 |
| MscI | TGGCCA | 2 cut(s) | 3354, 3509 |
| Msp20I | TGGCCA | 2 cut(s) | 3354, 3509 |
| MspA1I | CMGCKG | 2 cut(s) | 153, 3742 |
| MspI | CCGG | 6 cut(s) | 23, 124, 1262, 1957, 2021, 2835 |
| MunI | CAATTG | 2 cut(s) | 2649, 3636 |
| MvaI | CCWGG | 7 cut(s) | 953, 1667, 1782, 2117, 3005, 3164, 3675 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 28, 153, 608, 637, 1966, 2360, 3101, 3632, 3818 |
| NaeI | GCCGGC | 1 cut(s) | 24 |
| NarI | GGCGCC | 1 cut(s) | 2113 |
| NciI | CCSGG | 3 cut(s) | 1262, 1957, 2021 |
| NgoMIV | GCCGGC | 1 cut(s) | 22 |
| NheI | GCTAGC | 1 cut(s) | 3029 |
| NlaIII | CATG | 7 cut(s) | 257, 985, 1820, 1883, 2534, 2702, 3368 |
| NlaIV | GGNNCC | 9 cut(s) | 1469, 1803, 2114, 2335, 2646, 2968, 3001, 3120, 3384 |
| NmeAIII | GCCGAG | 1 cut(s) | 1102 |
| NmuCI | GTSAC | 5 cut(s) | 757, 836, 1237, 1812, 3437 |
| NsiI | ATGCAT | 1 cut(s) | 1881 |
| NspV | TTCGAA | 2 cut(s) | 2491, 3869 |
| PaeR7I | CTCGAG | 3 cut(s) | 2013, 2555, 3219 |
| PceI | AGGCCT | 1 cut(s) | 3812 |
| PciSI | GCTCTTC | 1 cut(s) | 3828 |
| PdiI | GCCGGC | 1 cut(s) | 24 |
| PdmI | GAANNNNTTC | 2 cut(s) | 472, 2338 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2179 |
| PkrI | GCNGC | 8 cut(s) | 155, 238, 1204, 1276, 1342, 2704, 2977, 3462 |
| PleI | GAGTC | 4 cut(s) | 370, 1478, 2951, 3436 |
| PluTI | GGCGCC | 1 cut(s) | 2116 |
| PpsI | GAGTC | 4 cut(s) | 370, 1478, 2951, 3436 |
| Ppu21I | YACGTR | 1 cut(s) | 179 |
| PpuMI | RGGWCCY | 2 cut(s) | 1468, 1801 |
| PshAI | GACNNNNGTC | 1 cut(s) | 361 |
| PshBI | ATTAAT | 3 cut(s) | 1112, 1625, 2301 |
| Psp5II | RGGWCCY | 2 cut(s) | 1468, 1801 |
| Psp6I | CCWGG | 7 cut(s) | 951, 1665, 1780, 2115, 3003, 3162, 3673 |
| PspFI | CCCAGC | 3 cut(s) | 159, 272, 2314 |
| PspGI | CCWGG | 7 cut(s) | 951, 1665, 1780, 2115, 3003, 3162, 3673 |
| PspN4I | GGNNCC | 9 cut(s) | 1469, 1803, 2114, 2335, 2646, 2968, 3001, 3120, 3384 |
| PspPPI | RGGWCCY | 2 cut(s) | 1468, 1801 |
| PspXI | VCTCGAGB | 1 cut(s) | 2013 |
| PstI | CTGCAG | 2 cut(s) | 598, 1612 |
| PstNI | CAGNNNCTG | 1 cut(s) | 740 |
| PsuI | RGATCY | 3 cut(s) | 512, 829, 3022 |
| PvuII | CAGCTG | 2 cut(s) | 153, 3742 |
| RsaI | GTAC | 3 cut(s) | 85, 2031, 2463 |
| RsaNI | GTAC | 3 cut(s) | 84, 2030, 2462 |
| SalI | GTCGAC | 1 cut(s) | 59 |
| SapI | GCTCTTC | 1 cut(s) | 3828 |
| SatI | GCNGC | 8 cut(s) | 154, 237, 1203, 1275, 1341, 2703, 2976, 3461 |
| SbfI | CCTGCAGG | 1 cut(s) | 1612 |
| ScaI | AGTACT | 1 cut(s) | 2463 |
| SchI | GAGTC | 4 cut(s) | 371, 1478, 2951, 3437 |
| SdaI | CCTGCAGG | 1 cut(s) | 1612 |
| SduI | GDGCHC | 5 cut(s) | 261, 489, 2020, 2984, 3004 |
| SfaNI | GCATC | 7 cut(s) | 124, 419, 1831, 2497, 3082, 3265, 3808 |
| SfcI | CTRYAG | 2 cut(s) | 594, 1608 |
| SfoI | GGCGCC | 1 cut(s) | 2114 |
| Sfr274I | CTCGAG | 3 cut(s) | 2013, 2555, 3219 |
| SfuI | TTCGAA | 2 cut(s) | 2491, 3869 |
| SinI | GGWCC | 7 cut(s) | 819, 1468, 1801, 2170, 2625, 2645, 3382 |
| SlaI | CTCGAG | 3 cut(s) | 2013, 2555, 3219 |
| SmlI | CTYRAG | 8 cut(s) | 632, 1299, 1730, 2013, 2555, 3219, 3260, 3666 |
| SmoI | CTYRAG | 8 cut(s) | 632, 1299, 1730, 2013, 2555, 3219, 3260, 3666 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1612 |
| SseBI | AGGCCT | 1 cut(s) | 3812 |
| SsiI | CCGC | 5 cut(s) | 1408, 3059, 3463, 3488, 3776 |
| SspDI | GGCGCC | 1 cut(s) | 2112 |
| SspMI | CTAG | 6 cut(s) | 227, 267, 384, 2483, 3030, 3654 |
| StuI | AGGCCT | 1 cut(s) | 3812 |
| StyI | CCWWGG | 5 cut(s) | 1014, 1989, 3378, 3510, 3813 |
| TaaI | ACNGT | 6 cut(s) | 74, 371, 2754, 3070, 3559, 3621 |
| TaiI | ACGT | 5 cut(s) | 181, 1596, 2434, 3448, 3793 |
| TaqI | TCGA | 9 cut(s) | 60, 1056, 1473, 2014, 2491, 2556, 3220, 3843, 3869 |
| TatI | WGTACW | 3 cut(s) | 83, 2029, 2461 |
| TseFI | GTSAC | 5 cut(s) | 757, 836, 1237, 1812, 3437 |
| TseI | GCWGC | 8 cut(s) | 153, 236, 1202, 1274, 1340, 2702, 2975, 3460 |
| Tsp45I | GTSAC | 5 cut(s) | 757, 836, 1237, 1812, 3437 |
| TspGWI | ACGGA | 1 cut(s) | 2725 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2179 |
| VpaK11BI | GGWCC | 7 cut(s) | 819, 1468, 1801, 2170, 2625, 2645, 3382 |
| VspI | ATTAAT | 3 cut(s) | 1112, 1625, 2301 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 722, 3362 |
| XhoI | CTCGAG | 3 cut(s) | 2013, 2555, 3219 |
| XmiI | GTMKAC | 1 cut(s) | 60 |
| XmnI | GAANNNNTTC | 2 cut(s) | 472, 2338 |
| XspI | CTAG | 6 cut(s) | 227, 267, 384, 2483, 3030, 3654 |
| ZrmI | AGTACT | 1 cut(s) | 2463 |
| Zsp2I | ATGCAT | 1 cut(s) | 1881 |