pycom10g26170

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0011014
Physical Location & Seq
Reverse (-)
27575282 .. 27577963
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g26170.1

Sequence Viewer

Length: 2682 bp
ATGATGACAAACAGGAAGAATTTTCAATTCAATATGAGCAGGAGGATGGCTTCAATTTTGATCATCTTATTAGTGCTGCTGATCGATCTGGGTGGTAATTTTGAAGTGACAGATGAGGATATGGAGGACCCAGAAATAAGTGCTGCTTTACAATCTTTAGGATGGTCTCAAGATTCTAATAATCCGGAAACTTCTCCTCCCCAGATACCTTCCATTGACAGGGAAGCTCTATTAAGCGAAATTCAATCATTGAAAAGAGAGGCGCTTAATCATAAACGGGCAGGTAATGTGCAACAGGCAATGACACAGCTAAAGAAGGCAAGGCTACTTGAACGGGACCTTGAAAGCCTTGAGTCTCAAGAGGGCAAAGTTGCAAATGATCCTACGAGAATTCATAAACAAGCTGCTGATAAATCATCGCAGTCACCTATGGTGGGTGATATTCATACAATGGAATGTACGGACTCCAAACCTGTAAGGAAGACTAAATTAATGATTCAGAAAGAGCTTCTGGGCTTGAAAAAGAAAGCCCTTGCTCTGAGAAGGGAAGGACGACTAAATGAGGCTGAAGAAGAATTGAAGAAAGGAAGGGTACTTGAGCAGCAACTTGAAGAACTAGAGAATGGTTCTATGCGGAAGGACATGCCTGGGACTGTTGGCAGTAAAGTCCCAGATTTGGCACATGAGCTTCCCAATGTTTCTGCAGGTCTGCCAGTTGCAGATGAGGAAGGAGAAAATGTAACAGATCAAGATATGCATGATCCAGCATACCTTTCTATGTTAAACAATTTGGGTTGGAATGATGACGATAATGAAGGGACCAACTCGTCATTGGAAACTTCTAAGCAAATGGATAATGTCTCAATGAAGGTCAGTGAACCTGCTGTAACTCAAGCCGCGGTTAATGTCCCAGCTGGAGGATCAAGGAGAAGCAAAGCTGAAATCCAGAGGGAACTTTTAGGGTTGAAAAGGAAAGCTCTTGCTCTGAGGCGCCAAGGAGAGACCGGGGATGCAGAAGAACTGCTAAAAAAAGCAAAAGCACTAGAGGGCCAGATGTTGGAAATGGAAGCACCCGAGGAAAATATCATTGAACCTACTCTTAATAGTGCTGAGGAAGAACGTGATGGAGGTGATGTAACAGAAAATAGTATGCGGGACCCAGCACTTTTCTCAGAGGGAACTTACTCCTACAAACCAGCCGTTTCTGCGCCAAGAAATAAAGGTGCAATCCAAAGGGAAGTTTTGGATATGAAAAGAAAGGCTTTTGCCTTTAGACGGAAGGGAGAAACCAAAGAAGCTGAGGAAGTGTTGAGGATGGCAAAGTTGCTAGAGATTCAAATTGAAGAGATGGAAGCCCCAAAGGATTTGAGTCTGCATGATGATTCAAAGGAAGAGAAATCTGAGAGTTTCGGATATCTAATTAACACCAAAAAGCCAGGGAATTTGAAGGATGATACAGATGTTAGAAGGTTTACTGAGGCAGCAATGGGTCCAATTGACGAAGTTGTTAAGTTGTCAGCAAAGAATTCTGAGTTTGTTCCTCTAACCTCACAGCTAGCTAAAGGAAGCCAACCATTTCCGGTGGAATTGGGTGCTTTTGGTGAAACTTATTTTCCGGACGACCAGAAAATAGCGGAAGGCGTTAGTCAGATATCTGCACCTGTCCAATCTGGAAACTTAGTTGATTTGTTGACAGGGGATGACTGGAGAAGTTATCAAAGGCCAGCTGAAAAACAAGATGATGGCCTAAAGTTTGTTTCTGTTGGTTCCTTTACCGCCAGTCCTCCCGTGCAGTTGGGATCCCAGACCTGTTCGAATGTATATCTGGGAAGCCAAGATAATAAAATTGATAAACAGGAAGATAAGCGAGATGTTAATGTAGCAAATTCAGTTCAGGAAGCTGCTTCTCAGAGCAGCCAAAGTGCCATTCGGCAAGAAATCCTGGCTTTTAAGAGGAGGGCATTAGCTTTAAAGAGAGAAGGGAAACTGACAGAAGCTCGAGAGGAACTTCGTCAGGCAAAGTTATTGGAGAAGCGTCTTGATGAAGATAGTCCTCAGTCCAAAACTGCTTCAAGTGAGGTGTCCAGTGCCGTACAAAATACAACTGGAGAGCAGAGCCAATCCCAATCACTACAGTCACGAGACATCCCTTCTTCTAGCCAAAAGCATCACGGTTCACCATCTTCGGACCCAAAACCTTTGTCCAGTCGTGATCGATCCAAGTTGCAACAGGAGTCTCTTGGCCACAAACGTCAGGCTATGAAGTTGCGGAGGGAGGGTCGGATGGAAGAAGCAGAAGCCGAGTTTGAATTAGCCAAGGCACTTGAGAATCAGTTGGATCTATCAGCTGCTCATGATTCCGCAACCGTTGACAAAGGAGAATCAATGGATGATGTCTCTGTTGAGGGTCTTGATCCTCAACTACTAGCTGCCTTGAAAGAAATTGGAATCGAAAATGCTAGTAATTTATCGCAAGGCCCCGAAAGACCAGAGCCTTCAAAAGTTAATGTTGGTAAGAGCAATAACACAATCCAAGATAGAAGTCGGCTGGAAGAACAGATCAAGGCAGAGAAGGTAAAGGCGGTAAATTTCAAACGTGCTGGAAAACAAGCGGAGGCCTTGGATGCTCTTCGAAAGGCCAAGCTACTCGAAAAGAAGCTGAATTCTCCGTCTTCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0006897 GO:0007034 GO:0007049 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009057 GO:0009653 GO:0009987 GO:0010927 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030163 GO:0030435 GO:0030437 GO:0031090 GO:0031321 GO:0031410 GO:0031982 GO:0032266 GO:0032502 GO:0032505 GO:0032509 GO:0032511 GO:0032989 GO:0032991 GO:0033036 GO:0033365 GO:0033565 GO:0034293 GO:0034613 GO:0035091 GO:0036211 GO:0036452 GO:0042763 GO:0042764 GO:0042886 GO:0043162 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043328 GO:0043412 GO:0043632 GO:0043934 GO:0043935 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045184 GO:0045324 GO:0046907 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051321 GO:0051603 GO:0051641 GO:0051649 GO:0051704 GO:0061659 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0120113 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901981 GO:1903046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYVE

Protein Analysis

894

Amino Acids

98.72

Weight (kDa)

5.27

Isoelectric Point (pI)

61.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011014)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61690
fragaria_vesca FvH4_3g03041 FvH4_3g03041 FvH4_3g03041
malus_domestica MD05G1335200.v1.1 MD10G1310700.v1.1
prunus_persica Prupe.4G011500_v2.0.a1 Prupe.4G030200_v2.0.a1
pyrus_communis pycom05g30660 pycom10g26170
rosa_chinensis RchiOBHm_Chr5g0004701
rosa_laevigata RLG00000031253
rosa_multiflora Rmu_sc0002210.1_g000004
rosa_roxburghii Rroxscaffold_1G00070860
rosa_rugosa Rorug04G0413400
rosa_samantha Rh5AG041000 Rh5BG040800 Rh5CG044500 Rh5DG040700
rosa_wichuraiana Rw5G003950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 826
Acc36I ACCTGC 3 cut(s) 272, 695, 889
AccB1I GGYRCC 1 cut(s) 990
AccB7I CCANNNNNTGG 1 cut(s) 1057
AccII CGCG 1 cut(s) 899
AccIII TCCGGA 2 cut(s) 184, 1615
AclWI GGATC 8 cut(s) 374, 755, 928, 1794, 1807, 2211, 2346, 2408
AcoI YGGCCR 1 cut(s) 2242
AcsI RAATTY 8 cut(s) 19, 240, 390, 1441, 1525, 1885, 2587, 2662
AcuI CTGAAG 1 cut(s) 588
AcyI GRCGYC 1 cut(s) 991
AfaI GTAC 3 cut(s) 460, 594, 2094
AfiI CCNNNNNNNGG 6 cut(s) 219, 434, 676, 917, 1057, 1275
AjnI CCWGG 3 cut(s) 646, 1435, 1941
AjuI GAANNNNNNNTTGG 2 cut(s) 1911, 1943
Alw26I GTCTC 7 cut(s) 171, 360, 865, 995, 2136, 2241, 2401
AlwI GGATC 8 cut(s) 374, 755, 928, 1794, 1807, 2211, 2346, 2408
Ama87I CYCGRG 2 cut(s) 1073, 1998
Aor13HI TCCGGA 2 cut(s) 184, 1615
AoxI GGCC 7 cut(s) 1048, 1721, 1744, 2242, 2476, 2616, 2637
ApeKI GCWGC 9 cut(s) 76, 143, 404, 601, 1481, 1901, 1914, 2348, 2429
ApoI RAATTY 8 cut(s) 19, 240, 390, 1441, 1525, 1885, 2587, 2662
ArsI GACNNNNNNTTYG 2 cut(s) 2186, 2218
AseI ATTAAT 1 cut(s) 491
AspLEI GCGC 3 cut(s) 265, 993, 1210
AspS9I GGNCC 8 cut(s) 127, 337, 819, 1048, 1156, 1490, 2188, 2477
AsuC2I CCSGG 1 cut(s) 1006
AsuHPI GGTGA 5 cut(s) 417, 449, 1142, 1613, 2169
AsuII TTCGAA 2 cut(s) 1814, 2632
AsuNHI GCTAGC 1 cut(s) 1555
AvaI CYCGRG 2 cut(s) 1073, 1998
AvaII GGWCC 6 cut(s) 127, 337, 819, 1156, 1490, 2188
BaeI ACNNNNGTAYC 2 cut(s) 1446, 1479
BalI TGGCCA 1 cut(s) 2244
BamHI GGATCC 1 cut(s) 1799
BanI GGYRCC 1 cut(s) 990
BauI CACGAG 1 cut(s) 2139
BbsI GAAGAC 2 cut(s) 488, 2664
BbvCI CCTCAGC 2 cut(s) 1110, 1299
BbvI GCAGC 9 cut(s) 63, 130, 391, 613, 1493, 1888, 1926, 2335, 2416
BccI CCATC 8 cut(s) 40, 156, 1118, 1309, 1342, 1736, 2188, 2278
BceAI ACGGC 2 cut(s) 1184, 2075
BciT130I CCWGG 3 cut(s) 648, 1437, 1943
BclI TGATCA 1 cut(s) 60
BcnI CCSGG 1 cut(s) 1006
BcoDI GTCTC 7 cut(s) 171, 360, 865, 995, 2136, 2241, 2401
BfaI CTAG 7 cut(s) 617, 1043, 1328, 1556, 2157, 2426, 2460
BfmI CTRYAG 2 cut(s) 702, 2132
BfoI RGCGCY 2 cut(s) 266, 994
BfuAI ACCTGC 3 cut(s) 272, 695, 889
Bme1390I CCNGG 4 cut(s) 648, 1006, 1437, 1943
Bme18I GGWCC 6 cut(s) 127, 337, 819, 1156, 1490, 2188
BmeT110I CYCGRG 2 cut(s) 1073, 1998
BmgT120I GGNCC 8 cut(s) 127, 337, 819, 1048, 1156, 1490, 2188, 2477
BmrFI CCNGG 4 cut(s) 648, 1006, 1437, 1943
BmsI GCATC 3 cut(s) 1000, 2176, 2614
BmtI GCTAGC 1 cut(s) 1559
BpiI GAAGAC 2 cut(s) 488, 2664
BpmI CTGGAG 3 cut(s) 936, 1726, 2127
Bpu10I CCTNAGC 2 cut(s) 1110, 1299
Bpu14I TTCGAA 2 cut(s) 1814, 2632
BpuEI CTTGAG 6 cut(s) 153, 342, 371, 617, 876, 2345
BpuMI CCSGG 1 cut(s) 1006
Bsa29I ATCGAT 2 cut(s) 84, 2215
BsaHI GRCGYC 1 cut(s) 991
BsaI GGTCTC 2 cut(s) 171, 995
BsaJI CCNNGG 8 cut(s) 647, 897, 994, 1005, 1074, 1436, 2316, 2619
BsaWI WCCGGW 3 cut(s) 184, 1579, 1615
BsaXI ACNNNNNCTCC 8 cut(s) 181, 211, 723, 753, 1119, 1149, 2263, 2293
Bsc4I CCNNNNNNNGG 6 cut(s) 219, 434, 676, 917, 1057, 1275
Bse1I ACTGG 6 cut(s) 713, 1709, 1779, 2085, 2110, 2205
Bse3DI GCAATG 2 cut(s) 306, 1491
BseAI TCCGGA 2 cut(s) 184, 1615
BseBI CCWGG 3 cut(s) 648, 1437, 1943
BseCI ATCGAT 2 cut(s) 84, 2215
BseDI CCNNGG 8 cut(s) 647, 897, 994, 1005, 1074, 1436, 2316, 2619
BseLI CCNNNNNNNGG 6 cut(s) 219, 434, 676, 917, 1057, 1275
BseMI GCAATG 2 cut(s) 306, 1491
BseNI ACTGG 6 cut(s) 713, 1709, 1779, 2085, 2110, 2205
BseRI GAGGAG 2 cut(s) 186, 1969
BseXI GCAGC 9 cut(s) 63, 130, 391, 613, 1493, 1888, 1926, 2335, 2416
BseYI CCCAGC 2 cut(s) 910, 1159
BsgI GTGCAG 2 cut(s) 1641, 1811
Bsh1236I CGCG 1 cut(s) 899
BshFI GGCC 7 cut(s) 1050, 1723, 1746, 2244, 2478, 2618, 2639
BshNI GGYRCC 1 cut(s) 990
BshVI ATCGAT 2 cut(s) 84, 2215
BsiHKCI CYCGRG 2 cut(s) 1073, 1998
BsiSI CCGG 4 cut(s) 185, 1005, 1580, 1616
BslFI GGGAC 6 cut(s) 350, 653, 664, 832, 893, 1169
BslI CCNNNNNNNGG 6 cut(s) 219, 434, 676, 917, 1057, 1275
BsmAI GTCTC 7 cut(s) 171, 360, 865, 995, 2136, 2241, 2401
BsmFI GGGAC 6 cut(s) 350, 653, 664, 832, 893, 1169
BsnI GGCC 7 cut(s) 1050, 1723, 1746, 2244, 2478, 2618, 2639
Bso31I GGTCTC 2 cut(s) 171, 995
BsoBI CYCGRG 2 cut(s) 1073, 1998
Bsp119I TTCGAA 2 cut(s) 1814, 2632
Bsp13I TCCGGA 2 cut(s) 184, 1615
BspANI GGCC 7 cut(s) 1050, 1723, 1746, 2244, 2478, 2618, 2639
BspDI ATCGAT 2 cut(s) 84, 2215
BspEI TCCGGA 2 cut(s) 184, 1615
BspFNI CGCG 1 cut(s) 899
BspHI TCATGA 1 cut(s) 2353
BspMAI CTGCAG 1 cut(s) 706
BspMI ACCTGC 3 cut(s) 272, 695, 889
BspOI GCTAGC 1 cut(s) 1559
BspPI GGATC 8 cut(s) 374, 755, 928, 1794, 1807, 2211, 2346, 2408
BspQI GCTCTTC 1 cut(s) 2634
BspT104I TTCGAA 2 cut(s) 1814, 2632
BspT107I GGYRCC 1 cut(s) 990
BspTNI GGTCTC 2 cut(s) 171, 995
BsrDI GCAATG 2 cut(s) 306, 1491
BsrI ACTGG 6 cut(s) 713, 1709, 1779, 2085, 2110, 2205
BssECI CCNNGG 8 cut(s) 647, 897, 994, 1005, 1074, 1436, 2316, 2619
BssNI GRCGYC 1 cut(s) 991
BssSI CACGAG 1 cut(s) 2139
BssT1I CCWWGG 3 cut(s) 994, 2316, 2619
Bst2BI CACGAG 1 cut(s) 2139
Bst2UI CCWGG 3 cut(s) 648, 1437, 1943
Bst4CI ACNGT 4 cut(s) 655, 2136, 2174, 2368
Bst6I CTCTTC 3 cut(s) 1338, 1386, 2634
BstACI GRCGYC 1 cut(s) 991
BstBI TTCGAA 2 cut(s) 1814, 2632
BstC8I GCNNGC 2 cut(s) 1557, 1725
BstDSI CCRYGG 1 cut(s) 897
BstFNI CGCG 1 cut(s) 899
BstH2I RGCGCY 2 cut(s) 266, 994
BstHHI GCGC 3 cut(s) 265, 993, 1210
BstMAI GTCTC 7 cut(s) 171, 360, 865, 995, 2136, 2241, 2401
BstMWI GCNNNNNNNGC 2 cut(s) 1205, 2624
BstNI CCWGG 3 cut(s) 648, 1437, 1943
BstNSI RCATGY 1 cut(s) 646
BstSCI CCNGG 4 cut(s) 646, 1004, 1435, 1941
BstSFI CTRYAG 2 cut(s) 702, 2132
BstUI CGCG 1 cut(s) 899
BstV1I GCAGC 9 cut(s) 63, 130, 391, 613, 1493, 1888, 1926, 2335, 2416
BstV2I GAAGAC 2 cut(s) 488, 2664
BstX2I RGATCY 2 cut(s) 1799, 2338
BstYI RGATCY 2 cut(s) 1799, 2338
Bsu15I ATCGAT 2 cut(s) 84, 2215
BsuRI GGCC 7 cut(s) 1050, 1723, 1746, 2244, 2478, 2618, 2639
BsuTUI ATCGAT 2 cut(s) 84, 2215
BtgI CCRYGG 1 cut(s) 897
BtgZI GCGATG 1 cut(s) 402
BtsIMutI CAGTG 2 cut(s) 880, 2092
BveI ACCTGC 3 cut(s) 272, 695, 889
Cac8I GCNNGC 2 cut(s) 1557, 1725
CciI TCATGA 1 cut(s) 2353
CfoI GCGC 3 cut(s) 265, 993, 1210
Cfr13I GGNCC 8 cut(s) 127, 337, 819, 1048, 1156, 1490, 2188, 2477
Cfr42I CCGCGG 1 cut(s) 900
ClaI ATCGAT 2 cut(s) 84, 2215
CseI GACGC 1 cut(s) 2024
Csp6I GTAC 3 cut(s) 459, 593, 2093
CviAII CATG 5 cut(s) 643, 683, 758, 1376, 2354
CviQI GTAC 3 cut(s) 459, 593, 2093
DinI GGCGCC 1 cut(s) 992
DraI TTTAAA 1 cut(s) 1971
DrdI GACNNNNNNGTC 1 cut(s) 826
DseDI GACNNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 1 cut(s) 2242
Eam1104I CTCTTC 3 cut(s) 1338, 1386, 2634
EarI CTCTTC 3 cut(s) 1338, 1386, 2634
Eco130I CCWWGG 3 cut(s) 994, 2316, 2619
Eco147I AGGCCT 1 cut(s) 2618
Eco31I GGTCTC 2 cut(s) 171, 995
Eco32I GATATC 2 cut(s) 1415, 1653
Eco47I GGWCC 6 cut(s) 127, 337, 819, 1156, 1490, 2188
Eco57I CTGAAG 1 cut(s) 588
Eco88I CYCGRG 2 cut(s) 1073, 1998
EcoO109I RGGNCCY 4 cut(s) 127, 337, 1156, 2477
EcoRI GAATTC 3 cut(s) 390, 1525, 2662
EcoRII CCWGG 3 cut(s) 646, 1435, 1941
EcoRV GATATC 2 cut(s) 1415, 1653
EcoT14I CCWWGG 3 cut(s) 994, 2316, 2619
EcoT22I ATGCAT 1 cut(s) 759
EgeI GGCGCC 1 cut(s) 992
EheI GGCGCC 1 cut(s) 992
ErhI CCWWGG 3 cut(s) 994, 2316, 2619
FaeI CATG 5 cut(s) 646, 686, 761, 1379, 2357
FalI AAGNNNNNCTT 4 cut(s) 130, 162, 1246, 1278
FaqI GGGAC 6 cut(s) 350, 653, 664, 832, 893, 1169
FatI CATG 5 cut(s) 642, 682, 757, 1375, 2353
FauI CCCGC 1 cut(s) 1146
FbaI TGATCA 1 cut(s) 60
FspBI CTAG 7 cut(s) 617, 1043, 1328, 1556, 2157, 2426, 2460
GlaI GCGC 3 cut(s) 264, 992, 1209
GsaI CCCAGC 2 cut(s) 914, 1163
GsuI CTGGAG 3 cut(s) 936, 1726, 2127
HaeII RGCGCY 2 cut(s) 266, 994
HaeIII GGCC 7 cut(s) 1050, 1723, 1746, 2244, 2478, 2618, 2639
HapII CCGG 4 cut(s) 185, 1005, 1580, 1616
HgaI GACGC 1 cut(s) 2024
HhaI GCGC 3 cut(s) 265, 993, 1210
Hin1I GRCGYC 1 cut(s) 991
Hin1II CATG 5 cut(s) 646, 686, 761, 1379, 2357
Hin6I GCGC 3 cut(s) 263, 991, 1208
HinP1I GCGC 3 cut(s) 263, 991, 1208
HincII GTYRAC 2 cut(s) 1692, 2371
HindII GTYRAC 2 cut(s) 1692, 2371
HpaII CCGG 4 cut(s) 185, 1005, 1580, 1616
HphI GGTGA 5 cut(s) 417, 449, 1142, 1613, 2169
Hpy166II GTNNAC 5 cut(s) 878, 1473, 1692, 2177, 2371
Hpy8I GTNNAC 5 cut(s) 878, 1473, 1692, 2177, 2371
HpyCH4III ACNGT 4 cut(s) 655, 2136, 2174, 2368
HpyCH4IV ACGT 3 cut(s) 1120, 2251, 2596
HpyF10VI GCNNNNNNNGC 2 cut(s) 1205, 2624
HpySE526I ACGT 3 cut(s) 1120, 2251, 2596
Hsp92I GRCGYC 1 cut(s) 991
Hsp92II CATG 5 cut(s) 646, 686, 761, 1379, 2357
HspAI GCGC 3 cut(s) 263, 991, 1208
KasI GGCGCC 1 cut(s) 990
KflI GGGWCCC 1 cut(s) 1156
Kpn2I TCCGGA 2 cut(s) 184, 1615
Ksp22I TGATCA 1 cut(s) 60
KspI CCGCGG 1 cut(s) 900
LguI GCTCTTC 1 cut(s) 2634
Lsp1109I GCAGC 9 cut(s) 63, 130, 391, 613, 1493, 1888, 1926, 2335, 2416
LweI GCATC 3 cut(s) 1000, 2176, 2614
MaeI CTAG 7 cut(s) 617, 1043, 1328, 1556, 2157, 2426, 2460
MaeII ACGT 3 cut(s) 1120, 2251, 2596
MaeIII GTNAC 6 cut(s) 106, 423, 739, 886, 1135, 2136
MfeI CAATTG 1 cut(s) 1494
MflI RGATCY 2 cut(s) 1799, 2338
MlsI TGGCCA 1 cut(s) 2244
MluNI TGGCCA 1 cut(s) 2244
Mly113I GGCGCC 1 cut(s) 991
MlyI GAGTC 4 cut(s) 362, 458, 1378, 2243
MmeI TCCRAC 4 cut(s) 776, 1038, 2261, 2316
Mox20I TGGCCA 1 cut(s) 2244
Mph1103I ATGCAT 1 cut(s) 759
MroI TCCGGA 2 cut(s) 184, 1615
MscI TGGCCA 1 cut(s) 2244
Msp20I TGGCCA 1 cut(s) 2244
MspA1I CMGCKG 4 cut(s) 899, 914, 1727, 2348
MspI CCGG 4 cut(s) 185, 1005, 1580, 1616
MspR9I CCNGG 4 cut(s) 648, 1006, 1437, 1943
MunI CAATTG 1 cut(s) 1494
MvaI CCWGG 3 cut(s) 648, 1437, 1943
MvnI CGCG 1 cut(s) 899
MwoI GCNNNNNNNGC 2 cut(s) 1205, 2624
NarI GGCGCC 1 cut(s) 991
NciI CCSGG 1 cut(s) 1006
NheI GCTAGC 1 cut(s) 1555
NlaIII CATG 5 cut(s) 646, 686, 761, 1379, 2357
NmeAIII GCCGAG 1 cut(s) 2326
NmuCI GTSAC 3 cut(s) 106, 423, 2136
NsiI ATGCAT 1 cut(s) 759
NspI RCATGY 1 cut(s) 646
NspV TTCGAA 2 cut(s) 1814, 2632
PaeR7I CTCGAG 1 cut(s) 1998
PagI TCATGA 1 cut(s) 2353
PceI AGGCCT 1 cut(s) 2618
PciSI GCTCTTC 1 cut(s) 2634
PfeI GAWTC 8 cut(s) 173, 496, 1333, 1382, 2329, 2357, 2381, 2448
PflMI CCANNNNNTGG 1 cut(s) 1057
PleI GAGTC 4 cut(s) 361, 458, 1377, 2242
PluTI GGCGCC 1 cut(s) 994
PpsI GAGTC 4 cut(s) 361, 458, 1377, 2242
PpuMI RGGWCCY 3 cut(s) 127, 337, 1156
PshBI ATTAAT 1 cut(s) 491
Psp5II RGGWCCY 3 cut(s) 127, 337, 1156
Psp6I CCWGG 3 cut(s) 646, 1435, 1941
PspFI CCCAGC 2 cut(s) 910, 1159
PspGI CCWGG 3 cut(s) 646, 1435, 1941
PspPI GGNCC 8 cut(s) 127, 337, 819, 1048, 1156, 1490, 2188, 2477
PspPPI RGGWCCY 3 cut(s) 127, 337, 1156
PstI CTGCAG 1 cut(s) 706
PsuI RGATCY 2 cut(s) 1799, 2338
PvuII CAGCTG 3 cut(s) 914, 1727, 2348
RsaI GTAC 3 cut(s) 460, 594, 2094
RsaNI GTAC 3 cut(s) 459, 593, 2093
SacII CCGCGG 1 cut(s) 900
SapI GCTCTTC 1 cut(s) 2634
Sau96I GGNCC 8 cut(s) 127, 337, 819, 1048, 1156, 1490, 2188, 2477
SchI GAGTC 4 cut(s) 362, 458, 1378, 2243
ScrFI CCNGG 4 cut(s) 648, 1006, 1437, 1943
SfaNI GCATC 3 cut(s) 1000, 2176, 2614
SfcI CTRYAG 2 cut(s) 702, 2132
SfoI GGCGCC 1 cut(s) 992
Sfr274I CTCGAG 1 cut(s) 1998
Sfr303I CCGCGG 1 cut(s) 900
SfuI TTCGAA 2 cut(s) 1814, 2632
SgrBI CCGCGG 1 cut(s) 900
SinI GGWCC 6 cut(s) 127, 337, 819, 1156, 1490, 2188
SlaI CTCGAG 1 cut(s) 1998
SmlI CTYRAG 7 cut(s) 168, 350, 357, 596, 891, 1998, 2324
SmoI CTYRAG 7 cut(s) 168, 350, 357, 596, 891, 1998, 2324
SseBI AGGCCT 1 cut(s) 2618
SspDI GGCGCC 1 cut(s) 990
SspMI CTAG 7 cut(s) 617, 1043, 1328, 1556, 2157, 2426, 2460
StuI AGGCCT 1 cut(s) 2618
StyD4I CCNGG 4 cut(s) 646, 1004, 1435, 1941
StyI CCWWGG 3 cut(s) 994, 2316, 2619
TaaI ACNGT 4 cut(s) 655, 2136, 2174, 2368
TaiI ACGT 3 cut(s) 1123, 2254, 2599
TaqI TCGA 7 cut(s) 84, 1814, 1999, 2215, 2451, 2632, 2649
TauI GCSGC 1 cut(s) 899
TfiI GAWTC 8 cut(s) 173, 496, 1333, 1382, 2329, 2357, 2381, 2448
TscAI CASTG 2 cut(s) 880, 2092
TseFI GTSAC 3 cut(s) 106, 423, 2136
TseI GCWGC 9 cut(s) 76, 143, 404, 601, 1481, 1901, 1914, 2348, 2429
Tsp45I GTSAC 3 cut(s) 106, 423, 2136
TspDTI ATGAA 7 cut(s) 383, 434, 828, 881, 1265, 2058, 2276
TspGWI ACGGA 3 cut(s) 476, 1291, 2658
TspRI CASTG 2 cut(s) 880, 2092
Van91I CCANNNNNTGG 1 cut(s) 1057
VpaK11BI GGWCC 6 cut(s) 127, 337, 819, 1156, 1490, 2188
VspI ATTAAT 1 cut(s) 491
XapI RAATTY 8 cut(s) 19, 240, 390, 1441, 1525, 1885, 2587, 2662
XceI RCATGY 1 cut(s) 646
XcmI CCANNNNNNNNNTGG 1 cut(s) 829
XhoI CTCGAG 1 cut(s) 1998
XspI CTAG 7 cut(s) 617, 1043, 1328, 1556, 2157, 2426, 2460
Zsp2I ATGCAT 1 cut(s) 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.