NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61690 |
| fragaria_vesca | FvH4_3g03041 FvH4_3g03041 FvH4_3g03041 |
| malus_domestica | MD05G1335200.v1.1 MD10G1310700.v1.1 |
| prunus_persica | Prupe.4G011500_v2.0.a1 Prupe.4G030200_v2.0.a1 |
| pyrus_communis | pycom05g30660 pycom10g26170 |
| rosa_chinensis | RchiOBHm_Chr5g0004701 |
| rosa_laevigata | RLG00000031253 |
| rosa_multiflora | Rmu_sc0002210.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00070860 |
| rosa_rugosa | Rorug04G0413400 |
| rosa_samantha | Rh5AG041000 Rh5BG040800 Rh5CG044500 Rh5DG040700 |
| rosa_wichuraiana | Rw5G003950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2230 |
| Acc36I | ACCTGC | 3 cut(s) | 1016, 1231, 2230 |
| AccB1I | GGYRCC | 1 cut(s) | 1695 |
| AccII | CGCG | 1 cut(s) | 2571 |
| AciI | CCGC | 7 cut(s) | 62, 209, 410, 1763, 2569, 2819, 2912 |
| AclWI | GGATC | 7 cut(s) | 450, 1469, 1633, 1820, 2352, 2476, 2927 |
| AcoI | YGGCCR | 2 cut(s) | 325, 2838 |
| AcsI | RAATTY | 7 cut(s) | 183, 984, 1501, 1647, 1784, 2455, 3181 |
| AcuI | CTGAAG | 8 cut(s) | 209, 620, 717, 939, 1338, 2097, 2106, 2807 |
| AcyI | GRCGYC | 1 cut(s) | 1696 |
| AfaI | GTAC | 1 cut(s) | 2112 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 61, 383, 409, 454, 1497, 1622, 2232, 2711, 3029 |
| AflII | CTTAAG | 1 cut(s) | 277 |
| AhlI | ACTAGT | 3 cut(s) | 14, 545, 2636 |
| AjnI | CCWGG | 4 cut(s) | 1698, 2170, 2278, 3066 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1471, 1503 |
| Alw21I | GWGCWC | 2 cut(s) | 495, 1288 |
| Alw26I | GTCTC | 5 cut(s) | 1285, 1417, 1698, 2408, 2766 |
| AlwI | GGATC | 7 cut(s) | 450, 1469, 1633, 1820, 2352, 2476, 2927 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1550, 2285 |
| Ama87I | CYCGRG | 1 cut(s) | 2710 |
| AoxI | GGCC | 7 cut(s) | 325, 1278, 2713, 2838, 2913, 3135, 3156 |
| ApeKI | GCWGC | 8 cut(s) | 812, 884, 1051, 1991, 2681, 2692, 2791, 2873 |
| ApoI | RAATTY | 7 cut(s) | 183, 984, 1501, 1647, 1784, 2455, 3181 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2788, 2820 |
| AseI | ATTAAT | 1 cut(s) | 807 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 85 |
| AspLEI | GCGC | 2 cut(s) | 1698, 2207 |
| AsuC2I | CCSGG | 2 cut(s) | 1616, 3000 |
| AsuHPI | GGTGA | 8 cut(s) | 701, 1766, 1868, 2021, 2211, 2268, 2694, 3106 |
| AsuII | TTCGAA | 1 cut(s) | 3151 |
| AvaI | CYCGRG | 1 cut(s) | 2710 |
| AvaII | GGWCC | 7 cut(s) | 432, 868, 906, 1081, 1891, 2168, 2996 |
| AxyI | CCTNAGG | 1 cut(s) | 138 |
| BalI | TGGCCA | 1 cut(s) | 2840 |
| BanI | GGYRCC | 1 cut(s) | 1695 |
| BanII | GRGCYC | 1 cut(s) | 495 |
| BbsI | GAAGAC | 4 cut(s) | 1280, 2208, 2622, 3010 |
| Bbv12I | GWGCWC | 2 cut(s) | 495, 1288 |
| BbvCI | CCTCAGC | 1 cut(s) | 5 |
| BbvI | GCAGC | 8 cut(s) | 799, 871, 1063, 1978, 2668, 2704, 2778, 2860 |
| BccI | CCATC | 8 cut(s) | 776, 897, 1178, 1360, 1753, 1762, 1853, 2095 |
| BceAI | ACGGC | 2 cut(s) | 340, 1293 |
| BciT130I | CCWGG | 4 cut(s) | 1700, 2172, 2280, 3068 |
| BclI | TGATCA | 1 cut(s) | 820 |
| BcnI | CCSGG | 2 cut(s) | 1616, 3000 |
| BcoDI | GTCTC | 5 cut(s) | 1285, 1417, 1698, 2408, 2766 |
| BcuI | ACTAGT | 3 cut(s) | 14, 545, 2636 |
| BfaI | CTAG | 9 cut(s) | 15, 546, 656, 1173, 1578, 2114, 2208, 2637, 2765 |
| BfmI | CTRYAG | 2 cut(s) | 1590, 1947 |
| BfoI | RGCGCY | 2 cut(s) | 1699, 2208 |
| BfrI | CTTAAG | 1 cut(s) | 277 |
| BfuAI | ACCTGC | 3 cut(s) | 1016, 1231, 2230 |
| BglII | AGATCT | 1 cut(s) | 2371 |
| BisI | GCNGC | 9 cut(s) | 813, 885, 1052, 1992, 2682, 2693, 2792, 2874, 2913 |
| BlsI | GCNGC | 9 cut(s) | 814, 886, 1053, 1993, 2683, 2694, 2793, 2875, 2914 |
| Bme1390I | CCNGG | 6 cut(s) | 1616, 1700, 2172, 2280, 3000, 3068 |
| Bme18I | GGWCC | 7 cut(s) | 432, 868, 906, 1081, 1891, 2168, 2996 |
| BmeT110I | CYCGRG | 1 cut(s) | 2710 |
| BmiI | GGNNCC | 8 cut(s) | 870, 908, 1082, 1697, 1893, 2169, 2998, 3192 |
| BmrFI | CCNGG | 6 cut(s) | 1616, 1700, 2172, 2280, 3000, 3068 |
| BpiI | GAAGAC | 4 cut(s) | 1280, 2208, 2622, 3010 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2182, 2214 |
| BpmI | CTGGAG | 5 cut(s) | 363, 578, 2287, 2661, 3089 |
| Bpu10I | CCTNAGC | 2 cut(s) | 5, 1496 |
| Bpu14I | TTCGAA | 1 cut(s) | 3151 |
| BpuEI | CTTGAG | 7 cut(s) | 266, 1367, 2184, 2630, 2870, 2974, 2976 |
| BpuMI | CCSGG | 2 cut(s) | 1616, 3000 |
| BsaBI | GATNNNNATC | 1 cut(s) | 441 |
| BsaHI | GRCGYC | 1 cut(s) | 1696 |
| BsaJI | CCNNGG | 7 cut(s) | 627, 1699, 2279, 2709, 2841, 3132, 3186 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1437, 1467 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 61, 383, 409, 454, 1497, 1622, 2232, 2711, 3029 |
| Bse1I | ACTGG | 5 cut(s) | 380, 2270, 2337, 2730, 2900 |
| Bse21I | CCTNAGG | 1 cut(s) | 138 |
| Bse3DI | GCAATG | 3 cut(s) | 1050, 1117, 1206 |
| Bse8I | GATNNNNATC | 1 cut(s) | 441 |
| BseBI | CCWGG | 4 cut(s) | 1700, 2172, 2280, 3068 |
| BseDI | CCNNGG | 7 cut(s) | 627, 1699, 2279, 2709, 2841, 3132, 3186 |
| BseGI | GGATG | 9 cut(s) | 169, 745, 787, 908, 1186, 1873, 2266, 2392, 2911 |
| BseJI | GATNNNNATC | 1 cut(s) | 441 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 61, 383, 409, 454, 1497, 1622, 2232, 2711, 3029 |
| BseMI | GCAATG | 3 cut(s) | 1050, 1117, 1206 |
| BseNI | ACTGG | 5 cut(s) | 380, 2270, 2337, 2730, 2900 |
| BseRI | GAGGAG | 3 cut(s) | 366, 1950, 2539 |
| BseXI | GCAGC | 8 cut(s) | 799, 871, 1063, 1978, 2668, 2704, 2778, 2860 |
| BseYI | CCCAGC | 1 cut(s) | 1894 |
| BsgI | GTGCAG | 3 cut(s) | 705, 1977, 3138 |
| Bsh1236I | CGCG | 1 cut(s) | 2571 |
| BshFI | GGCC | 7 cut(s) | 327, 1280, 2715, 2840, 2915, 3137, 3158 |
| BshNI | GGYRCC | 1 cut(s) | 1695 |
| BsiHKAI | GWGCWC | 2 cut(s) | 495, 1288 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2710 |
| BsiSI | CCGG | 2 cut(s) | 1616, 3000 |
| BslFI | GGGAC | 7 cut(s) | 1084, 1094, 1314, 1820, 2082, 2937, 2982 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 61, 383, 409, 454, 1497, 1622, 2232, 2711, 3029 |
| BsmAI | GTCTC | 5 cut(s) | 1285, 1417, 1698, 2408, 2766 |
| BsmFI | GGGAC | 7 cut(s) | 1084, 1094, 1314, 1820, 2082, 2937, 2982 |
| BsmI | GAATGC | 2 cut(s) | 1942, 3013 |
| BsnI | GGCC | 7 cut(s) | 327, 1280, 2715, 2840, 2915, 3137, 3158 |
| BsoBI | CYCGRG | 1 cut(s) | 2710 |
| Bsp119I | TTCGAA | 1 cut(s) | 3151 |
| Bsp1286I | GDGCHC | 2 cut(s) | 495, 1288 |
| BspACI | CCGC | 7 cut(s) | 62, 209, 410, 1763, 2569, 2819, 2912 |
| BspANI | GGCC | 7 cut(s) | 327, 1280, 2715, 2840, 2915, 3137, 3158 |
| BspFNI | CGCG | 1 cut(s) | 2571 |
| BspLI | GGNNCC | 8 cut(s) | 870, 908, 1082, 1697, 1893, 2169, 2998, 3192 |
| BspMI | ACCTGC | 3 cut(s) | 1016, 1231, 2230 |
| BspPI | GGATC | 7 cut(s) | 450, 1469, 1633, 1820, 2352, 2476, 2927 |
| BspQI | GCTCTTC | 1 cut(s) | 3153 |
| BspT104I | TTCGAA | 1 cut(s) | 3151 |
| BspT107I | GGYRCC | 1 cut(s) | 1695 |
| BspTI | CTTAAG | 1 cut(s) | 277 |
| BsrDI | GCAATG | 3 cut(s) | 1050, 1117, 1206 |
| BsrI | ACTGG | 5 cut(s) | 380, 2270, 2337, 2730, 2900 |
| BssECI | CCNNGG | 7 cut(s) | 627, 1699, 2279, 2709, 2841, 3132, 3186 |
| BssNI | GRCGYC | 1 cut(s) | 1696 |
| BssT1I | CCWWGG | 2 cut(s) | 627, 2841 |
| Bst2UI | CCWGG | 4 cut(s) | 1700, 2172, 2280, 3068 |
| Bst4CI | ACNGT | 4 cut(s) | 536, 1135, 2621, 2706 |
| BstACI | GRCGYC | 1 cut(s) | 1696 |
| BstAFI | CTTAAG | 1 cut(s) | 277 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1031 |
| BstBI | TTCGAA | 1 cut(s) | 3151 |
| BstC8I | GCNNGC | 9 cut(s) | 156, 255, 491, 614, 618, 1404, 1575, 2569, 2586 |
| BstF5I | GGATG | 9 cut(s) | 169, 745, 787, 908, 1186, 1873, 2266, 2392, 2911 |
| BstFNI | CGCG | 1 cut(s) | 2571 |
| BstH2I | RGCGCY | 2 cut(s) | 1699, 2208 |
| BstHHI | GCGC | 2 cut(s) | 1698, 2207 |
| BstMAI | GTCTC | 5 cut(s) | 1285, 1417, 1698, 2408, 2766 |
| BstNI | CCWGG | 4 cut(s) | 1700, 2172, 2280, 3068 |
| BstNSI | RCATGY | 3 cut(s) | 1406, 1573, 2699 |
| BstSCI | CCNGG | 6 cut(s) | 1614, 1698, 2170, 2278, 2998, 3066 |
| BstSFI | CTRYAG | 2 cut(s) | 1590, 1947 |
| BstUI | CGCG | 1 cut(s) | 2571 |
| BstV1I | GCAGC | 8 cut(s) | 799, 871, 1063, 1978, 2668, 2704, 2778, 2860 |
| BstV2I | GAAGAC | 4 cut(s) | 1280, 2208, 2622, 3010 |
| BstX2I | RGATCY | 4 cut(s) | 442, 2357, 2371, 2468 |
| BstYI | RGATCY | 4 cut(s) | 442, 2357, 2371, 2468 |
| Bsu36I | CCTNAGG | 1 cut(s) | 138 |
| BsuRI | GGCC | 7 cut(s) | 327, 1280, 2715, 2840, 2915, 3137, 3158 |
| BtsCI | GGATG | 9 cut(s) | 169, 745, 787, 908, 1186, 1873, 2266, 2392, 2911 |
| BtsIMutI | CAGTG | 6 cut(s) | 387, 722, 1707, 1846, 1914, 2907 |
| BveI | ACCTGC | 3 cut(s) | 1016, 1231, 2230 |
| Cac8I | GCNNGC | 9 cut(s) | 156, 255, 491, 614, 618, 1404, 1575, 2569, 2586 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1550, 2285 |
| CfoI | GCGC | 2 cut(s) | 1698, 2207 |
| CseI | GACGC | 2 cut(s) | 137, 2594 |
| Csp6I | GTAC | 1 cut(s) | 2111 |
| CviAII | CATG | 8 cut(s) | 27, 56, 1397, 1403, 1492, 1570, 2051, 2696 |
| CviQI | GTAC | 1 cut(s) | 2111 |
| DinI | GGCGCC | 1 cut(s) | 1697 |
| EaeI | YGGCCR | 2 cut(s) | 325, 2838 |
| EciI | GGCGGA | 1 cut(s) | 1778 |
| Ecl136II | GAGCTC | 1 cut(s) | 493 |
| Eco130I | CCWWGG | 2 cut(s) | 627, 2841 |
| Eco147I | AGGCCT | 1 cut(s) | 3137 |
| Eco24I | GRGCYC | 1 cut(s) | 495 |
| Eco47I | GGWCC | 7 cut(s) | 432, 868, 906, 1081, 1891, 2168, 2996 |
| Eco53kI | GAGCTC | 1 cut(s) | 493 |
| Eco57I | CTGAAG | 8 cut(s) | 209, 620, 717, 939, 1338, 2097, 2106, 2807 |
| Eco81I | CCTNAGG | 1 cut(s) | 138 |
| Eco88I | CYCGRG | 1 cut(s) | 2710 |
| EcoICRI | GAGCTC | 1 cut(s) | 493 |
| EcoO109I | RGGNCCY | 4 cut(s) | 868, 1081, 1891, 2996 |
| EcoRI | GAATTC | 1 cut(s) | 3181 |
| EcoRII | CCWGG | 4 cut(s) | 1698, 2170, 2278, 3066 |
| EcoT14I | CCWWGG | 2 cut(s) | 627, 2841 |
| EcoT22I | ATGCAT | 1 cut(s) | 2056 |
| EcoT38I | GRGCYC | 1 cut(s) | 495 |
| EgeI | GGCGCC | 1 cut(s) | 1697 |
| EheI | GGCGCC | 1 cut(s) | 1697 |
| ErhI | CCWWGG | 2 cut(s) | 627, 2841 |
| FaeI | CATG | 8 cut(s) | 30, 59, 1400, 1406, 1495, 1573, 2054, 2699 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 387, 419, 1411, 1443 |
| FaqI | GGGAC | 7 cut(s) | 1084, 1094, 1314, 1820, 2082, 2937, 2982 |
| FatI | CATG | 8 cut(s) | 26, 55, 1396, 1402, 1491, 1569, 2050, 2695 |
| FauI | CCCGC | 1 cut(s) | 2576 |
| FbaI | TGATCA | 1 cut(s) | 820 |
| Fnu4HI | GCNGC | 9 cut(s) | 813, 885, 1052, 1992, 2682, 2693, 2792, 2874, 2913 |
| FokI | GGATG | 9 cut(s) | 176, 752, 794, 915, 1193, 1880, 2273, 2399, 2918 |
| FriOI | GRGCYC | 1 cut(s) | 495 |
| Fsp4HI | GCNGC | 9 cut(s) | 813, 885, 1052, 1992, 2682, 2693, 2792, 2874, 2913 |
| FspBI | CTAG | 9 cut(s) | 15, 546, 656, 1173, 1578, 2114, 2208, 2637, 2765 |
| GlaI | GCGC | 2 cut(s) | 1697, 2206 |
| GluI | GCNGC | 9 cut(s) | 813, 885, 1052, 1992, 2682, 2693, 2792, 2874, 2913 |
| GsaI | CCCAGC | 1 cut(s) | 1898 |
| GsuI | CTGGAG | 5 cut(s) | 363, 578, 2287, 2661, 3089 |
| HaeII | RGCGCY | 2 cut(s) | 1699, 2208 |
| HaeIII | GGCC | 7 cut(s) | 327, 1280, 2715, 2840, 2915, 3137, 3158 |
| HapII | CCGG | 2 cut(s) | 1616, 3000 |
| HgaI | GACGC | 2 cut(s) | 137, 2594 |
| HhaI | GCGC | 2 cut(s) | 1698, 2207 |
| Hin1I | GRCGYC | 1 cut(s) | 1696 |
| Hin1II | CATG | 8 cut(s) | 30, 59, 1400, 1406, 1495, 1573, 2054, 2699 |
| Hin6I | GCGC | 2 cut(s) | 1696, 2205 |
| HinP1I | GCGC | 2 cut(s) | 1696, 2205 |
| HincII | GTYRAC | 2 cut(s) | 961, 2253 |
| HindII | GTYRAC | 2 cut(s) | 961, 2253 |
| HindIII | AAGCTT | 2 cut(s) | 156, 614 |
| HpaII | CCGG | 2 cut(s) | 1616, 3000 |
| HphI | GGTGA | 8 cut(s) | 701, 1766, 1868, 2021, 2211, 2268, 2694, 3106 |
| Hpy166II | GTNNAC | 4 cut(s) | 961, 2153, 2253, 2276 |
| Hpy8I | GTNNAC | 4 cut(s) | 961, 2153, 2253, 2276 |
| HpyCH4III | ACNGT | 4 cut(s) | 536, 1135, 2621, 2706 |
| HpyCH4IV | ACGT | 3 cut(s) | 2776, 3045, 3115 |
| HpySE526I | ACGT | 3 cut(s) | 2776, 3045, 3115 |
| Hsp92I | GRCGYC | 1 cut(s) | 1696 |
| Hsp92II | CATG | 8 cut(s) | 30, 59, 1400, 1406, 1495, 1573, 2054, 2699 |
| HspAI | GCGC | 2 cut(s) | 1696, 2205 |
| KasI | GGCGCC | 1 cut(s) | 1695 |
| Ksp22I | TGATCA | 1 cut(s) | 820 |
| LguI | GCTCTTC | 1 cut(s) | 3153 |
| LmnI | GCTCC | 4 cut(s) | 241, 412, 2023, 3196 |
| Lsp1109I | GCAGC | 8 cut(s) | 799, 871, 1063, 1978, 2668, 2704, 2778, 2860 |
| MaeI | CTAG | 9 cut(s) | 15, 546, 656, 1173, 1578, 2114, 2208, 2637, 2765 |
| MaeII | ACGT | 3 cut(s) | 2776, 3045, 3115 |
| MaeIII | GTNAC | 9 cut(s) | 370, 847, 1009, 1453, 1565, 1870, 2768, 3038, 3062 |
| MfeI | CAATTG | 1 cut(s) | 2961 |
| MflI | RGATCY | 4 cut(s) | 442, 2357, 2371, 2468 |
| MhlI | GDGCHC | 2 cut(s) | 495, 1288 |
| MlsI | TGGCCA | 1 cut(s) | 2840 |
| MluNI | TGGCCA | 1 cut(s) | 2840 |
| Mly113I | GGCGCC | 1 cut(s) | 1696 |
| MlyI | GAGTC | 4 cut(s) | 481, 1106, 1376, 2768 |
| MmeI | TCCRAC | 8 cut(s) | 246, 1490, 1502, 1600, 1773, 2115, 2577, 2786 |
| Mox20I | TGGCCA | 1 cut(s) | 2840 |
| Mph1103I | ATGCAT | 1 cut(s) | 2056 |
| MroXI | GAANNNNTTC | 1 cut(s) | 85 |
| MscI | TGGCCA | 1 cut(s) | 2840 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1401, 1407 |
| Msp20I | TGGCCA | 1 cut(s) | 2840 |
| MspA1I | CMGCKG | 2 cut(s) | 598, 2681 |
| MspCI | CTTAAG | 1 cut(s) | 277 |
| MspI | CCGG | 2 cut(s) | 1616, 3000 |
| MspR9I | CCNGG | 6 cut(s) | 1616, 1700, 2172, 2280, 3000, 3068 |
| MunI | CAATTG | 1 cut(s) | 2961 |
| Mva1269I | GAATGC | 2 cut(s) | 1942, 3013 |
| MvaI | CCWGG | 4 cut(s) | 1700, 2172, 2280, 3068 |
| MvnI | CGCG | 1 cut(s) | 2571 |
| NarI | GGCGCC | 1 cut(s) | 1696 |
| NciI | CCSGG | 2 cut(s) | 1616, 3000 |
| NlaIII | CATG | 8 cut(s) | 30, 59, 1400, 1406, 1495, 1573, 2054, 2699 |
| NlaIV | GGNNCC | 8 cut(s) | 870, 908, 1082, 1697, 1893, 2169, 2998, 3192 |
| NmeAIII | GCCGAG | 2 cut(s) | 3157, 3167 |
| NmuCI | GTSAC | 4 cut(s) | 370, 847, 2768, 3038 |
| NsiI | ATGCAT | 1 cut(s) | 2056 |
| NspI | RCATGY | 3 cut(s) | 1406, 1573, 2699 |
| NspV | TTCGAA | 1 cut(s) | 3151 |
| PaeI | GCATGC | 1 cut(s) | 1406 |
| PaqCI | CACCTGC | 1 cut(s) | 2230 |
| PceI | AGGCCT | 1 cut(s) | 3137 |
| PciSI | GCTCTTC | 1 cut(s) | 3153 |
| PctI | GAATGC | 2 cut(s) | 1942, 3013 |
| PdmI | GAANNNNTTC | 1 cut(s) | 85 |
| PfeI | GAWTC | 9 cut(s) | 47, 125, 701, 727, 914, 1246, 1583, 2324, 2882 |
| PfoI | TCCNGGA | 1 cut(s) | 2998 |
| PkrI | GCNGC | 9 cut(s) | 814, 886, 1053, 1993, 2683, 2694, 2793, 2875, 2914 |
| PleI | GAGTC | 4 cut(s) | 480, 1105, 1376, 2767 |
| PluTI | GGCGCC | 1 cut(s) | 1699 |
| PpsI | GAGTC | 4 cut(s) | 480, 1105, 1376, 2767 |
| PpuMI | RGGWCCY | 4 cut(s) | 868, 1081, 1891, 2996 |
| PshBI | ATTAAT | 1 cut(s) | 807 |
| Psp124BI | GAGCTC | 1 cut(s) | 495 |
| Psp5II | RGGWCCY | 4 cut(s) | 868, 1081, 1891, 2996 |
| Psp6I | CCWGG | 4 cut(s) | 1698, 2170, 2278, 3066 |
| PspFI | CCCAGC | 1 cut(s) | 1894 |
| PspGI | CCWGG | 4 cut(s) | 1698, 2170, 2278, 3066 |
| PspN4I | GGNNCC | 8 cut(s) | 870, 908, 1082, 1697, 1893, 2169, 2998, 3192 |
| PspPPI | RGGWCCY | 4 cut(s) | 868, 1081, 1891, 2996 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2103, 2135 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1550, 2285 |
| PsuI | RGATCY | 4 cut(s) | 442, 2357, 2371, 2468 |
| PvuII | CAGCTG | 2 cut(s) | 598, 2681 |
| RsaI | GTAC | 1 cut(s) | 2112 |
| RsaNI | GTAC | 1 cut(s) | 2111 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1401, 1407 |
| SacI | GAGCTC | 1 cut(s) | 495 |
| SapI | GCTCTTC | 1 cut(s) | 3153 |
| SatI | GCNGC | 9 cut(s) | 813, 885, 1052, 1992, 2682, 2693, 2792, 2874, 2913 |
| SchI | GAGTC | 4 cut(s) | 481, 1106, 1376, 2768 |
| ScrFI | CCNGG | 6 cut(s) | 1616, 1700, 2172, 2280, 3000, 3068 |
| SduI | GDGCHC | 2 cut(s) | 495, 1288 |
| SfcI | CTRYAG | 2 cut(s) | 1590, 1947 |
| SfoI | GGCGCC | 1 cut(s) | 1697 |
| SfuI | TTCGAA | 1 cut(s) | 3151 |
| SinI | GGWCC | 7 cut(s) | 432, 868, 906, 1081, 1891, 2168, 2996 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1401, 1407 |
| SmlI | CTYRAG | 8 cut(s) | 245, 277, 1346, 2199, 2609, 2849, 2953, 2991 |
| SmoI | CTYRAG | 8 cut(s) | 245, 277, 1346, 2199, 2609, 2849, 2953, 2991 |
| SpeI | ACTAGT | 3 cut(s) | 14, 545, 2636 |
| SphI | GCATGC | 1 cut(s) | 1406 |
| SseBI | AGGCCT | 1 cut(s) | 3137 |
| SsiI | CCGC | 7 cut(s) | 62, 209, 410, 1763, 2569, 2819, 2912 |
| SspDI | GGCGCC | 1 cut(s) | 1695 |
| SspI | AATATT | 1 cut(s) | 1192 |
| SspMI | CTAG | 9 cut(s) | 15, 546, 656, 1173, 1578, 2114, 2208, 2637, 2765 |
| SstI | GAGCTC | 1 cut(s) | 495 |
| StuI | AGGCCT | 1 cut(s) | 3137 |
| StyD4I | CCNGG | 6 cut(s) | 1614, 1698, 2170, 2278, 2998, 3066 |
| StyI | CCWWGG | 2 cut(s) | 627, 2841 |
| TaaI | ACNGT | 4 cut(s) | 536, 1135, 2621, 2706 |
| TaiI | ACGT | 3 cut(s) | 2779, 3048, 3118 |
| TaqI | TCGA | 3 cut(s) | 40, 2642, 3151 |
| TauI | GCSGC | 1 cut(s) | 2915 |
| TfiI | GAWTC | 9 cut(s) | 47, 125, 701, 727, 914, 1246, 1583, 2324, 2882 |
| TscAI | CASTG | 6 cut(s) | 387, 729, 1714, 1846, 1914, 2907 |
| TseFI | GTSAC | 4 cut(s) | 370, 847, 2768, 3038 |
| TseI | GCWGC | 8 cut(s) | 812, 884, 1051, 1991, 2681, 2692, 2791, 2873 |
| Tsp45I | GTSAC | 4 cut(s) | 370, 847, 2768, 3038 |
| TspDTI | ATGAA | 9 cut(s) | 180, 726, 878, 1127, 1326, 1530, 1539, 1810, 2502 |
| TspGWI | ACGGA | 1 cut(s) | 437 |
| TspRI | CASTG | 6 cut(s) | 387, 729, 1714, 1846, 1914, 2907 |
| Vha464I | CTTAAG | 1 cut(s) | 277 |
| VpaK11BI | GGWCC | 7 cut(s) | 432, 868, 906, 1081, 1891, 2168, 2996 |
| VspI | ATTAAT | 1 cut(s) | 807 |
| XapI | RAATTY | 7 cut(s) | 183, 984, 1501, 1647, 1784, 2455, 3181 |
| XbaI | TCTAGA | 1 cut(s) | 655 |
| XceI | RCATGY | 3 cut(s) | 1406, 1573, 2699 |
| XmnI | GAANNNNTTC | 1 cut(s) | 85 |
| XspI | CTAG | 9 cut(s) | 15, 546, 656, 1173, 1578, 2114, 2208, 2637, 2765 |
| Zsp2I | ATGCAT | 1 cut(s) | 2056 |