AT1G67850

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001774
Physical Location & Seq
Forward (+)
25437900 .. 25442221
4322 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G67850.7

Sequence Viewer

Length: 1215 bp
ATGGGAATCTTTTCACGCAGTTCAATTAGTAGGAAATCAAAAGATGGAATGAAGATCATTGCAACGGCATTTTTTGGAGTAACATTTGGCTTTCTGATTGGAATATCTTTTCCATCATTATCAATCACTAAGGTGAGTCTCCCTACAAACTTTCTTCCTTCAAACGATCTCTCATATATCGAGGAAAAGGGTTCGAAAATTGCAACTCCAGAAAGTCATAAAGCTTGGTCATCATCAAAGGGTAACGATAGCAGCTCATCTACTCCGATTGACAAATCAAAGATCTGGGTACCTTCTAATCCTCGTGGTGCTGAAATGTTGCCACCGGGTATGGTTGCTGCTGAATCAGACTTCTATTTGCGCAGATTATGGGGTTTACCGCATGAGGATTTGAAAAGTGAACCAAGATACCTCGCAACATTTACAGTGGGTATTAATCAGAAAGCAAATATCGATGCTTGTGTCAAGAAGTTTTCAGAAAACTTCACTATTGTCCTGTTTCACTATGACGGCCGGGTAACTGAGTGGGATGAGTTTGAATGGTCAAAGACTGCTATACACATTAGCGTACGAAAGCAGACAAAATGGTGGTATGCAAAGAGGTTTTTGCACCCTGATATTGTAGCAAGATATGATTATATCTTCGTCTGGGATGAAGACCTGGGTGTCGAGCATTTTAACGCAGAAGAGTACGTAAAGATGGTGAAGAAGCACGGCCTGGAGATTTCCCAACCTGGCTTGGAACCAAACCAGGGACTAACGTGGCAAATGACAAAGAGACGAGGAGATATGGAAGTTCACAAGATAACAGAAGAAAGACCTGGATGGTGCTCAGATCCTCATCTCCCTCCATGTGCTGCATTCGTAGAGATCATGGCTCCTGTATTTTCAAGAAATGCCTGGCGATGCGTGTGGCATGTGATCCAGAATGATTTGGTACACGGTTGGGGTCTTGACTTTGCACTCAGAAGATGTGTTGAGCCTGCACATGAGAAGATAGGAGTAGTTGATTCTCAATGGGTCGTTCATCAATCTTTTCCTTCCCTTGGCAACCAAGGTGAGGCGACAGACGGGAAAGCACCATGGCAAGGGGTGAGGGATAGATGCAAAAAGGAATGGACAATGTTCCAGAGTAGAATGGCTAACGCAGAGAAGGATTATTTCAAATCCTTACAAGTAGAAGGCTCCTCAAATTCAACAGCCACAACCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

404

Amino Acids

46.02

Weight (kDa)

7.68

Isoelectric Point (pI)

46.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 99 - 385 9.8e-141 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 665
Acc16I TGCGCA 1 cut(s) 362
Acc65I GGTACC 1 cut(s) 289
AccB1I GGYRCC 1 cut(s) 289
AciI CCGC 1 cut(s) 380
AclWI GGATC 2 cut(s) 830, 916
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 1 cut(s) 1192
AfaI GTAC 4 cut(s) 291, 570, 692, 939
AfiI CCNNNNNNNGG 4 cut(s) 752, 1046, 1060, 1088
AgsI TTSAA 7 cut(s) 24, 162, 394, 539, 891, 1165, 1197
AjnI CCWGG 6 cut(s) 660, 717, 733, 750, 820, 899
AleI CACNNNNGTG 1 cut(s) 131
AluBI AGCT 2 cut(s) 224, 255
AluI AGCT 2 cut(s) 224, 255
Alw21I GWGCWC 1 cut(s) 833
Alw26I GTCTC 2 cut(s) 143, 772
AlwI GGATC 2 cut(s) 830, 916
AoxI GGCC 2 cut(s) 511, 715
ApeKI GCWGC 3 cut(s) 252, 338, 857
ApoI RAATTY 1 cut(s) 1192
AseI ATTAAT 1 cut(s) 435
Asp700I GAANNNNTTC 1 cut(s) 10
Asp718I GGTACC 1 cut(s) 289
AspLEI GCGC 1 cut(s) 363
AsuC2I CCSGG 2 cut(s) 327, 515
AsuHPI GGTGA 4 cut(s) 145, 715, 1070, 1105
AsuII TTCGAA 1 cut(s) 194
BanI GGYRCC 1 cut(s) 289
BauI CACGAG 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 663
Bbv12I GWGCWC 1 cut(s) 833
BbvI GCAGC 3 cut(s) 264, 325, 844
BccI CCATC 4 cut(s) 38, 121, 694, 819
BceAI ACGGC 3 cut(s) 81, 526, 730
BciT130I CCWGG 6 cut(s) 662, 719, 735, 752, 822, 901
BcnI CCSGG 2 cut(s) 327, 515
BcoDI GTCTC 2 cut(s) 143, 772
BglII AGATCT 1 cut(s) 282
BisI GCNGC 3 cut(s) 253, 339, 858
BlsI GCNGC 3 cut(s) 254, 340, 859
Bme1390I CCNGG 8 cut(s) 327, 515, 662, 719, 735, 752, 822, 901
BmiI GGNNCC 4 cut(s) 291, 744, 879, 1186
BmrFI CCNGG 8 cut(s) 327, 515, 662, 719, 735, 752, 822, 901
BmsI GCATC 3 cut(s) 445, 896, 1094
BpiI GAAGAC 1 cut(s) 663
BpmI CTGGAG 2 cut(s) 192, 740
Bpu14I TTCGAA 1 cut(s) 194
BpuMI CCSGG 2 cut(s) 327, 515
Bsa29I ATCGAT 1 cut(s) 453
BsaAI YACGTR 1 cut(s) 694
BsaBI GATNNNNATC 1 cut(s) 840
BsaJI CCNNGG 5 cut(s) 661, 751, 1045, 1054, 1082
Bsc4I CCNNNNNNNGG 4 cut(s) 752, 1046, 1060, 1088
Bse3DI GCAATG 1 cut(s) 57
Bse8I GATNNNNATC 1 cut(s) 840
BseBI CCWGG 6 cut(s) 662, 719, 735, 752, 822, 901
BseCI ATCGAT 1 cut(s) 453
BseDI CCNNGG 5 cut(s) 661, 751, 1045, 1054, 1082
BseGI GGATG 3 cut(s) 535, 658, 830
BseJI GATNNNNATC 1 cut(s) 840
BseLI CCNNNNNNNGG 4 cut(s) 752, 1046, 1060, 1088
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 3 cut(s) 513, 846, 979
BseRI GAGGAG 2 cut(s) 798, 1177
BseX3I CGGCCG 1 cut(s) 511
BseXI GCAGC 3 cut(s) 264, 325, 844
BsgI GTGCAG 1 cut(s) 969
Bsh1285I CGRYCG 1 cut(s) 514
BshFI GGCC 2 cut(s) 513, 717
BshNI GGYRCC 1 cut(s) 289
BshVI ATCGAT 1 cut(s) 453
BsiEI CGRYCG 1 cut(s) 514
BsiHKAI GWGCWC 1 cut(s) 833
BsiSI CCGG 2 cut(s) 326, 514
BsiWI CGTACG 1 cut(s) 568
BslFI GGGAC 1 cut(s) 768
BslI CCNNNNNNNGG 4 cut(s) 752, 1046, 1060, 1088
BsmAI GTCTC 2 cut(s) 143, 772
BsmBI CGTCTC 1 cut(s) 772
BsmFI GGGAC 1 cut(s) 768
BsmI GAATGC 1 cut(s) 860
BsnI GGCC 2 cut(s) 513, 717
Bsp119I TTCGAA 1 cut(s) 194
Bsp1286I GDGCHC 1 cut(s) 833
Bsp143I GATC 6 cut(s) 54, 166, 282, 835, 870, 921
Bsp19I CCATGG 1 cut(s) 1082
BspACI CCGC 1 cut(s) 380
BspANI GGCC 2 cut(s) 513, 717
BspCNI CTCAG 3 cut(s) 514, 845, 978
BspDI ATCGAT 1 cut(s) 453
BspLI GGNNCC 4 cut(s) 291, 744, 879, 1186
BspPI GGATC 2 cut(s) 830, 916
BspT104I TTCGAA 1 cut(s) 194
BspT107I GGYRCC 1 cut(s) 289
BsrDI GCAATG 1 cut(s) 57
BssECI CCNNGG 5 cut(s) 661, 751, 1045, 1054, 1082
BssMI GATC 6 cut(s) 54, 166, 282, 835, 870, 921
BssSI CACGAG 1 cut(s) 303
BssT1I CCWWGG 3 cut(s) 1045, 1054, 1082
Bst2BI CACGAG 1 cut(s) 303
Bst2UI CCWGG 6 cut(s) 662, 719, 735, 752, 822, 901
Bst4CI ACNGT 2 cut(s) 427, 944
Bst6I CTCTTC 1 cut(s) 681
BstBAI YACGTR 1 cut(s) 694
BstBI TTCGAA 1 cut(s) 194
BstC8I GCNNGC 1 cut(s) 984
BstDEI CTNAG 4 cut(s) 129, 522, 832, 965
BstDSI CCRYGG 1 cut(s) 1082
BstF5I GGATG 3 cut(s) 535, 658, 830
BstHHI GCGC 1 cut(s) 363
BstKTI GATC 6 cut(s) 57, 169, 285, 838, 873, 924
BstMAI GTCTC 2 cut(s) 143, 772
BstMBI GATC 6 cut(s) 54, 166, 282, 835, 870, 921
BstMCI CGRYCG 1 cut(s) 514
BstNI CCWGG 6 cut(s) 662, 719, 735, 752, 822, 901
BstNSI RCATGY 1 cut(s) 920
BstSCI CCNGG 8 cut(s) 325, 513, 660, 717, 733, 750, 820, 899
BstSNI TACGTA 1 cut(s) 694
BstV1I GCAGC 3 cut(s) 264, 325, 844
BstV2I GAAGAC 1 cut(s) 663
BstX2I RGATCY 2 cut(s) 282, 835
BstYI RGATCY 2 cut(s) 282, 835
BstZI CGGCCG 1 cut(s) 511
Bsu15I ATCGAT 1 cut(s) 453
BsuRI GGCC 2 cut(s) 513, 717
BsuTUI ATCGAT 1 cut(s) 453
BtgI CCRYGG 1 cut(s) 1082
BtgZI GCGATG 1 cut(s) 919
BtsCI GGATG 3 cut(s) 535, 658, 830
BtsIMutI CAGTG 1 cut(s) 432
Cac8I GCNNGC 1 cut(s) 984
CfoI GCGC 1 cut(s) 363
ClaI ATCGAT 1 cut(s) 453
Csp6I GTAC 4 cut(s) 290, 569, 691, 938
CviAII CATG 6 cut(s) 383, 852, 874, 917, 989, 1083
CviQI GTAC 4 cut(s) 290, 569, 691, 938
DdeI CTNAG 4 cut(s) 129, 522, 832, 965
DpnI GATC 6 cut(s) 56, 168, 284, 837, 872, 923
DpnII GATC 6 cut(s) 54, 166, 282, 835, 870, 921
DrdI GACNNNNNNGTC 1 cut(s) 665
DseDI GACNNNNNNGTC 1 cut(s) 665
EaeI YGGCCR 1 cut(s) 511
EagI CGGCCG 1 cut(s) 511
Eam1104I CTCTTC 1 cut(s) 681
EarI CTCTTC 1 cut(s) 681
EclXI CGGCCG 1 cut(s) 511
Eco105I TACGTA 1 cut(s) 694
Eco130I CCWWGG 3 cut(s) 1045, 1054, 1082
Eco52I CGGCCG 1 cut(s) 511
EcoRII CCWGG 6 cut(s) 660, 717, 733, 750, 820, 899
EcoT14I CCWWGG 3 cut(s) 1045, 1054, 1082
ErhI CCWWGG 3 cut(s) 1045, 1054, 1082
Esp3I CGTCTC 1 cut(s) 772
FaeI CATG 6 cut(s) 386, 855, 877, 920, 992, 1086
FaqI GGGAC 1 cut(s) 768
FatI CATG 6 cut(s) 382, 851, 873, 916, 988, 1082
Fnu4HI GCNGC 3 cut(s) 253, 339, 858
FokI GGATG 3 cut(s) 542, 665, 837
Fsp4HI GCNGC 3 cut(s) 253, 339, 858
FspI TGCGCA 1 cut(s) 362
GlaI GCGC 1 cut(s) 362
GluI GCNGC 3 cut(s) 253, 339, 858
GsuI CTGGAG 2 cut(s) 192, 740
HaeIII GGCC 2 cut(s) 513, 717
HapII CCGG 2 cut(s) 326, 514
HhaI GCGC 1 cut(s) 363
Hin1II CATG 6 cut(s) 386, 855, 877, 920, 992, 1086
Hin6I GCGC 1 cut(s) 361
HinP1I GCGC 1 cut(s) 361
HindIII AAGCTT 1 cut(s) 222
HinfI GANTC 4 cut(s) 6, 136, 344, 1010
HpaII CCGG 2 cut(s) 326, 514
HphI GGTGA 4 cut(s) 145, 715, 1070, 1105
Hpy166II GTNNAC 4 cut(s) 377, 401, 799, 940
Hpy188I TCNGA 7 cut(s) 96, 267, 349, 441, 478, 835, 968
Hpy188III TCNNGA 6 cut(s) 209, 466, 891, 925, 953, 1129
Hpy8I GTNNAC 4 cut(s) 377, 401, 799, 940
HpyAV CCTTC 5 cut(s) 168, 303, 1050, 1147, 1175
HpyCH4III ACNGT 2 cut(s) 427, 944
HpyCH4IV ACGT 2 cut(s) 693, 761
HpyCH4V TGCA 8 cut(s) 62, 203, 596, 610, 860, 962, 986, 1107
HpyF3I CTNAG 4 cut(s) 129, 522, 832, 965
HpySE526I ACGT 2 cut(s) 693, 761
Hsp92II CATG 6 cut(s) 386, 855, 877, 920, 992, 1086
HspAI GCGC 1 cut(s) 361
KpnI GGTACC 1 cut(s) 293
Kzo9I GATC 6 cut(s) 54, 166, 282, 835, 870, 921
LmnI GCTCC 2 cut(s) 883, 1190
Lsp1109I GCAGC 3 cut(s) 264, 325, 844
LweI GCATC 3 cut(s) 445, 896, 1094
MaeII ACGT 2 cut(s) 693, 761
MaeIII GTNAC 3 cut(s) 79, 242, 517
MalI GATC 6 cut(s) 56, 168, 284, 837, 872, 923
MboI GATC 6 cut(s) 54, 166, 282, 835, 870, 921
MboII GAAGA 9 cut(s) 64, 146, 634, 668, 698, 718, 824, 981, 1006
MflI RGATCY 2 cut(s) 282, 835
MhlI GDGCHC 1 cut(s) 833
MluCI AATT 3 cut(s) 24, 198, 1192
MlyI GAGTC 1 cut(s) 145
MroXI GAANNNNTTC 1 cut(s) 10
MseI TTAA 3 cut(s) 435, 678, 1213
MslI CAYNNNNRTG 1 cut(s) 131
MspI CCGG 2 cut(s) 326, 514
MspR9I CCNGG 8 cut(s) 327, 515, 662, 719, 735, 752, 822, 901
Mva1269I GAATGC 1 cut(s) 860
MvaI CCWGG 6 cut(s) 662, 719, 735, 752, 822, 901
NciI CCSGG 2 cut(s) 327, 515
NcoI CCATGG 1 cut(s) 1082
NdeII GATC 6 cut(s) 54, 166, 282, 835, 870, 921
NlaIII CATG 6 cut(s) 386, 855, 877, 920, 992, 1086
NlaIV GGNNCC 4 cut(s) 291, 744, 879, 1186
NsbI TGCGCA 1 cut(s) 362
NspI RCATGY 1 cut(s) 920
NspV TTCGAA 1 cut(s) 194
OliI CACNNNNGTG 1 cut(s) 131
PctI GAATGC 1 cut(s) 860
PdmI GAANNNNTTC 1 cut(s) 10
PfeI GAWTC 3 cut(s) 6, 344, 1010
Pfl23II CGTACG 1 cut(s) 568
PkrI GCNGC 3 cut(s) 254, 340, 859
PleI GAGTC 1 cut(s) 144
PpsI GAGTC 1 cut(s) 144
Ppu21I YACGTR 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 435
Psp6I CCWGG 6 cut(s) 660, 717, 733, 750, 820, 899
PspGI CCWGG 6 cut(s) 660, 717, 733, 750, 820, 899
PspLI CGTACG 1 cut(s) 568
PspN4I GGNNCC 4 cut(s) 291, 744, 879, 1186
PsuI RGATCY 2 cut(s) 282, 835
RsaI GTAC 4 cut(s) 291, 570, 692, 939
RsaNI GTAC 4 cut(s) 290, 569, 691, 938
RseI CAYNNNNRTG 1 cut(s) 131
SaqAI TTAA 3 cut(s) 435, 678, 1213
SatI GCNGC 3 cut(s) 253, 339, 858
Sau3AI GATC 6 cut(s) 54, 166, 282, 835, 870, 921
SchI GAGTC 1 cut(s) 145
ScrFI CCNGG 8 cut(s) 327, 515, 662, 719, 735, 752, 822, 901
SduI GDGCHC 1 cut(s) 833
SfaNI GCATC 3 cut(s) 445, 896, 1094
SfuI TTCGAA 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 131
SnaBI TACGTA 1 cut(s) 694
Sse9I AATT 3 cut(s) 24, 198, 1192
SsiI CCGC 1 cut(s) 380
StyD4I CCNGG 8 cut(s) 325, 513, 660, 717, 733, 750, 820, 899
StyI CCWWGG 3 cut(s) 1045, 1054, 1082
TaaI ACNGT 2 cut(s) 427, 944
TaiI ACGT 2 cut(s) 696, 764
TaqI TCGA 4 cut(s) 180, 194, 453, 669
TasI AATT 3 cut(s) 24, 198, 1192
TfiI GAWTC 3 cut(s) 6, 344, 1010
Tru1I TTAA 3 cut(s) 435, 678, 1213
Tru9I TTAA 3 cut(s) 435, 678, 1213
TscAI CASTG 1 cut(s) 432
TseI GCWGC 3 cut(s) 252, 338, 857
TspDTI ATGAA 3 cut(s) 65, 669, 1016
TspRI CASTG 1 cut(s) 432
VspI ATTAAT 1 cut(s) 435
XapI RAATTY 1 cut(s) 1192
XceI RCATGY 1 cut(s) 920
XmnI GAANNNNTTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.