Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001774

Physical Location & Seq

Genomic Coordinates Reverse (-)

25944062 .. 25949432

Gene Structure 5371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G246200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGGGAACCCTTTCACGCAGTGCGGGTGGTAGAAAACCAAACGAGACTATGAGGCTTATTGTGACAACTTTTGTAGGAGTAGTTTTTGGATTCTTGATAGGTGTATCCTTTCCAACCTTGTCATTAACAAAGCTGAACCTCTCGTCCAGCCTTCTTCCAAATGTTGATCTAACGTACAATGAGGACCAGAAATCAGACATCTCCAGGCAAACAATTCTAAATGCTTGGTCTTCTACGAGGAGTAATAATAGCTCAACTAAAGCTCAGAGTTCAAATGGTACAGGAAGGATTTGGGTGCCGTCAAATCCTAGAGGTGCAGAAAGACTACCACCAGGAATTCTTGCAGCTGAGTCAGACTTCTACTTGCGCAGATTATGGGGCAAGCCCAGTGAGGACTTGACCATCAAACCAAGGTACCTTGTAACATTCACCGTGGGTTTGAATCAGAAAAAGAATATTGATGCAGCAGTGAAAAAGTTTTCAGAGAACTTTACAATTCTTCTTTTTCATTACGATGGCCAAACAACTGAATGGGATGAGTTTGAGTGGTCTGAGCGAGCTATACATGTTAGTGTCCGTAAGCAGACTAAATGGTGGTATGCCAAGCGATTTTTGCATCCTGACATTGTGGCCCCATATGACTACATATTTATCTGGGATGAAGACCTGGGAGTCGAGCATTTTAATGCAGAAGAATACATAAAACTTGTGAGGAAGCATGGCTTGGAGATTTCACAGCCTGGTTTGGAACCCAACAAGGGCTTAACATGGCAGATGACAAAGAGGAGAGGCGATCGTGAAGTGCACAAACAAACAGTGGAAAAACCTGGCTGGTGCACTGACCCACATCTGCCTCCATGTGCAGCGTTTGTTGAAATCATGGCTCCAGTATTTTCTAGAAGTGCCTGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGTCTTGACTTTGCCCTGAGAAAATGTGTAGAGCCTGCGCATGAGAAGATAGGAGTTGTAGATTCTCAGTGGATTGTTCATCAAACCGTTCCCTCACTTGGAAGCCAGGGTGAACCGCAAAATGGAAAAGCACCATGGCAAGGGGTGAGGGAAAGGTGCAGAAAGGAATGGACAATGTTCCAGATGCGCGTAGCGAATGCGGAGAATGCGTATTTTAAGGCCATTGGGGTTGATCCTTCCAATTCGACAACCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF707

Protein Analysis

404

Amino Acids

45.99

Weight (kDa)

8.94

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001774)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67850 AT1G67850 AT1G67850 AT1G67850 AT1G67850 AT1G67850 AT1G67850
fragaria_vesca	FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710 FvH4_4g25710
malus_domestica	MD13G1099800.v1.1 MD16G1100800.v1.1
prunus_persica	Prupe.1G246200_v2.0.a1 Prupe.1G246200_v2.0.a1 Prupe.1G246200_v2.0.a1
pyrus_communis	pycom13g08720 pycom16g08530
rosa_chinensis	RchiOBHm_Chr4g0433141
rosa_laevigata	RLG00000006781
rosa_multiflora	Rmu_ssc0000295.1_g000051
rosa_roxburghii	Rroxscaffold_5G00374620
rosa_rugosa	Rorug04G0265700 Rorug04G0265800 Rorug04G0265800 Rorug04G0265900 Rorug04G0266000 Rorug04G0266100 Rorug04G0266200.1
rosa_samantha	Rh4AG319800 Rh4BG328100 Rh4CG343500 Rh4DG323300
rosa_wichuraiana	Rw4G027780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc16I	TGCGCA	2 cut(s)	368, 993
Acc65I	GGTACC	1 cut(s)	414
AccB1I	GGYRCC	2 cut(s)	295, 414
AccII	CGCG	1 cut(s)	1143
AciI	CCGC	3 cut(s)	23, 1070, 1154
AclWI	GGATC	1 cut(s)	1181
AcoI	YGGCCR	1 cut(s)	517
AcsI	RAATTY	1 cut(s)	336
AdeI	CACNNNGTG	1 cut(s)	20
AfaI	GTAC	3 cut(s)	176, 280, 416
AfiI	CCNNNNNNNGG	5 cut(s)	758, 952, 1052, 1076, 1094
AflIII	ACRYGT	1 cut(s)	565
AgsI	TTSAA	3 cut(s)	273, 442, 875
AjnI	CCWGG	7 cut(s)	203, 331, 666, 739, 826, 905, 1059
AjuI	GAANNNNNNNTTGG	2 cut(s)	707, 739
AloI	GAACNNNNNNTCC	2 cut(s)	128, 160
AluBI	AGCT	5 cut(s)	133, 252, 263, 347, 560
AluI	AGCT	5 cut(s)	133, 252, 263, 347, 560
Alw21I	GWGCWC	2 cut(s)	807, 839
Alw26I	GTCTC	1 cut(s)	38
Alw44I	GTGCAC	2 cut(s)	803, 835
AlwI	GGATC	1 cut(s)	1181
AoxI	GGCC	3 cut(s)	517, 630, 1173
ApaLI	GTGCAC	2 cut(s)	803, 835
ApeKI	GCWGC	3 cut(s)	344, 464, 863
ApoI	RAATTY	1 cut(s)	336
Asp700I	GAANNNNTTC	1 cut(s)	10
Asp718I	GGTACC	1 cut(s)	414
AspLEI	GCGC	4 cut(s)	369, 912, 994, 1143
AspS9I	GGNCC	3 cut(s)	184, 631, 943
AsuHPI	GGTGA	3 cut(s)	421, 1076, 1111
AvaII	GGWCC	2 cut(s)	184, 943
BaeGI	GKGCMC	2 cut(s)	807, 839
BaeI	ACNNNNGTAYC	2 cut(s)	398, 431
BalI	TGGCCA	1 cut(s)	519
BanI	GGYRCC	2 cut(s)	295, 414
BbsI	GAAGAC	2 cut(s)	222, 669
Bbv12I	GWGCWC	2 cut(s)	807, 839
BbvI	GCAGC	3 cut(s)	356, 476, 875
BccI	CCATC	2 cut(s)	410, 509
BceAI	ACGGC	1 cut(s)	283
BciT130I	CCWGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
BciVI	GTATCC	1 cut(s)	115
BcoDI	GTCTC	1 cut(s)	38
BfaI	CTAG	2 cut(s)	309, 897
BfoI	RGCGCY	1 cut(s)	913
BfuI	GTATCC	1 cut(s)	115
BisI	GCNGC	3 cut(s)	345, 465, 864
BlsI	GCNGC	3 cut(s)	346, 466, 865
Bme1390I	CCNGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
Bme18I	GGWCC	2 cut(s)	184, 943
BmgT120I	GGNCC	3 cut(s)	184, 631, 943
BmiI	GGNNCC	6 cut(s)	7, 297, 416, 633, 750, 885
BmrFI	CCNGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
BmrI	ACTGGG	1 cut(s)	381
BmsI	GCATC	3 cut(s)	451, 625, 1128
BmuI	ACTGGG	1 cut(s)	381
BpiI	GAAGAC	2 cut(s)	222, 669
BpmI	CTGGAG	2 cut(s)	187, 870
BsaJI	CCNNGG	6 cut(s)	410, 432, 667, 946, 1060, 1088
BsaXI	ACNNNNNCTCC	2 cut(s)	1148, 1178
Bsc4I	CCNNNNNNNGG	5 cut(s)	758, 952, 1052, 1076, 1094
Bse1I	ACTGG	2 cut(s)	387, 887
BseBI	CCWGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
BseDI	CCNNGG	6 cut(s)	410, 432, 667, 946, 1060, 1088
BseGI	GGATG	3 cut(s)	541, 616, 664
BseLI	CCNNNNNNNGG	5 cut(s)	758, 952, 1052, 1076, 1094
BseMII	CTCAG	5 cut(s)	278, 339, 543, 962, 1034
BseNI	ACTGG	2 cut(s)	387, 887
BseRI	GAGGAG	2 cut(s)	253, 799
BseSI	GKGCMC	2 cut(s)	807, 839
BseXI	GCAGC	3 cut(s)	356, 476, 875
BsgI	GTGCAG	3 cut(s)	336, 882, 1132
Bsh1236I	CGCG	1 cut(s)	1143
Bsh1285I	CGRYCG	1 cut(s)	796
BshFI	GGCC	3 cut(s)	519, 632, 1175
BshNI	GGYRCC	2 cut(s)	295, 414
BsiEI	CGRYCG	1 cut(s)	796
BsiHKAI	GWGCWC	2 cut(s)	807, 839
BslI	CCNNNNNNNGG	5 cut(s)	758, 952, 1052, 1076, 1094
BsmAI	GTCTC	1 cut(s)	38
BsmI	GAATGC	2 cut(s)	1156, 1165
BsnI	GGCC	3 cut(s)	519, 632, 1175
Bsp1286I	GDGCHC	2 cut(s)	807, 839
Bsp143I	GATC	3 cut(s)	166, 793, 1186
Bsp19I	CCATGG	2 cut(s)	946, 1088
BspACI	CCGC	3 cut(s)	23, 1070, 1154
BspANI	GGCC	3 cut(s)	519, 632, 1175
BspCNI	CTCAG	5 cut(s)	277, 340, 544, 963, 1033
BspFNI	CGCG	1 cut(s)	1143
BspLI	GGNNCC	6 cut(s)	7, 297, 416, 633, 750, 885
BspPI	GGATC	1 cut(s)	1181
BspT107I	GGYRCC	2 cut(s)	295, 414
BsrI	ACTGG	2 cut(s)	387, 887
BssECI	CCNNGG	6 cut(s)	410, 432, 667, 946, 1060, 1088
BssMI	GATC	3 cut(s)	166, 793, 1186
BssT1I	CCWWGG	3 cut(s)	410, 946, 1088
Bst2UI	CCWGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
Bst4CI	ACNGT	3 cut(s)	433, 817, 1042
BstC8I	GCNNGC	3 cut(s)	383, 558, 990
BstDEI	CTNAG	5 cut(s)	264, 348, 552, 971, 1020
BstDSI	CCRYGG	3 cut(s)	432, 946, 1088
BstF5I	GGATG	3 cut(s)	541, 616, 664
BstFNI	CGCG	1 cut(s)	1143
BstH2I	RGCGCY	1 cut(s)	913
BstHHI	GCGC	4 cut(s)	369, 912, 994, 1143
BstKTI	GATC	3 cut(s)	169, 796, 1189
BstMAI	GTCTC	1 cut(s)	38
BstMBI	GATC	3 cut(s)	166, 793, 1186
BstMCI	CGRYCG	1 cut(s)	796
BstMWI	GCNNNNNNNGC	2 cut(s)	613, 1160
BstNI	CCWGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
BstNSI	RCATGY	1 cut(s)	569
BstSCI	CCNGG	7 cut(s)	203, 331, 666, 739, 826, 905, 1059
BstSLI	GKGCMC	2 cut(s)	807, 839
BstUI	CGCG	1 cut(s)	1143
BstV1I	GCAGC	3 cut(s)	356, 476, 875
BstV2I	GAAGAC	2 cut(s)	222, 669
BsuI	GTATCC	1 cut(s)	115
BsuRI	GGCC	3 cut(s)	519, 632, 1175
BtgI	CCRYGG	3 cut(s)	432, 946, 1088
BtsCI	GGATG	3 cut(s)	541, 616, 664
BtsI	GCAGTG	2 cut(s)	25, 474
BtsIMutI	CAGTG	6 cut(s)	25, 394, 474, 822, 837, 1028
Cac8I	GCNNGC	3 cut(s)	383, 558, 990
CfoI	GCGC	4 cut(s)	369, 912, 994, 1143
Cfr13I	GGNCC	3 cut(s)	184, 631, 943
Csp6I	GTAC	3 cut(s)	175, 279, 415
CviAII	CATG	8 cut(s)	566, 719, 768, 858, 880, 947, 995, 1089
CviQI	GTAC	3 cut(s)	175, 279, 415
DdeI	CTNAG	5 cut(s)	264, 348, 552, 971, 1020
DpnI	GATC	3 cut(s)	168, 795, 1188
DpnII	GATC	3 cut(s)	166, 793, 1186
DraIII	CACNNNGTG	1 cut(s)	20
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
EaeI	YGGCCR	1 cut(s)	517
Eco130I	CCWWGG	3 cut(s)	410, 946, 1088
Eco47I	GGWCC	2 cut(s)	184, 943
EcoRI	GAATTC	1 cut(s)	336
EcoRII	CCWGG	7 cut(s)	203, 331, 666, 739, 826, 905, 1059
EcoT14I	CCWWGG	3 cut(s)	410, 946, 1088
ErhI	CCWWGG	3 cut(s)	410, 946, 1088
FaeI	CATG	8 cut(s)	569, 722, 771, 861, 883, 950, 998, 1092
FalI	AAGNNNNNCTT	2 cut(s)	707, 739
FatI	CATG	8 cut(s)	565, 718, 767, 857, 879, 946, 994, 1088
FauI	CCCGC	1 cut(s)	16
FauNDI	CATATG	2 cut(s)	637, 924
Fnu4HI	GCNGC	3 cut(s)	345, 465, 864
FokI	GGATG	3 cut(s)	548, 603, 671
Fsp4HI	GCNGC	3 cut(s)	345, 465, 864
FspBI	CTAG	2 cut(s)	309, 897
FspI	TGCGCA	2 cut(s)	368, 993
GlaI	GCGC	4 cut(s)	368, 911, 993, 1142
GluI	GCNGC	3 cut(s)	345, 465, 864
GsuI	CTGGAG	2 cut(s)	187, 870
HaeII	RGCGCY	1 cut(s)	913
HaeIII	GGCC	3 cut(s)	519, 632, 1175
HhaI	GCGC	4 cut(s)	369, 912, 994, 1143
Hin1II	CATG	8 cut(s)	569, 722, 771, 861, 883, 950, 998, 1092
Hin6I	GCGC	4 cut(s)	367, 910, 992, 1141
HinP1I	GCGC	4 cut(s)	367, 910, 992, 1141
HinfI	GANTC	6 cut(s)	90, 350, 442, 672, 928, 1016
HphI	GGTGA	3 cut(s)	421, 1076, 1111
Hpy166II	GTNNAC	3 cut(s)	805, 837, 1067
Hpy188I	TCNGA	7 cut(s)	196, 267, 355, 447, 484, 553, 933
Hpy188III	TCNNGA	6 cut(s)	94, 620, 797, 897, 959, 1135
Hpy8I	GTNNAC	3 cut(s)	805, 837, 1067
HpyAV	CCTTC	3 cut(s)	161, 279, 1200
HpyCH4III	ACNGT	3 cut(s)	433, 817, 1042
HpyCH4IV	ACGT	1 cut(s)	173
HpyCH4V	TGCA	9 cut(s)	317, 344, 464, 616, 689, 805, 837, 863, 1113
HpyF10VI	GCNNNNNNNGC	2 cut(s)	613, 1160
HpyF3I	CTNAG	5 cut(s)	264, 348, 552, 971, 1020
HpySE526I	ACGT	1 cut(s)	173
Hsp92II	CATG	8 cut(s)	569, 722, 771, 861, 883, 950, 998, 1092
HspAI	GCGC	4 cut(s)	367, 910, 992, 1141
KpnI	GGTACC	1 cut(s)	418
Kzo9I	GATC	3 cut(s)	166, 793, 1186
LmnI	GCTCC	1 cut(s)	889
Lsp1109I	GCAGC	3 cut(s)	356, 476, 875
LweI	GCATC	3 cut(s)	451, 625, 1128
MaeI	CTAG	2 cut(s)	309, 897
MaeII	ACGT	1 cut(s)	173
MaeIII	GTNAC	2 cut(s)	61, 421
MalI	GATC	3 cut(s)	168, 795, 1188
MboI	GATC	3 cut(s)	166, 793, 1186
MboII	GAAGA	6 cut(s)	146, 222, 491, 674, 704, 1012
MhlI	GDGCHC	2 cut(s)	807, 839
MlsI	TGGCCA	1 cut(s)	519
MluCI	AATT	4 cut(s)	213, 336, 495, 1195
MluNI	TGGCCA	1 cut(s)	519
MlyI	GAGTC	2 cut(s)	359, 681
MmeI	TCCRAC	1 cut(s)	137
Mox20I	TGGCCA	1 cut(s)	519
MroXI	GAANNNNTTC	1 cut(s)	10
MscI	TGGCCA	1 cut(s)	519
MseI	TTAA	4 cut(s)	125, 684, 764, 1170
MslI	CAYNNNNRTG	3 cut(s)	513, 570, 684
Msp20I	TGGCCA	1 cut(s)	519
MspA1I	CMGCKG	1 cut(s)	347
MspR9I	CCNGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
Mva1269I	GAATGC	2 cut(s)	1156, 1165
MvaI	CCWGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
MvnI	CGCG	1 cut(s)	1143
MwoI	GCNNNNNNNGC	2 cut(s)	613, 1160
NcoI	CCATGG	2 cut(s)	946, 1088
NdeI	CATATG	2 cut(s)	637, 924
NdeII	GATC	3 cut(s)	166, 793, 1186
NlaIII	CATG	8 cut(s)	569, 722, 771, 861, 883, 950, 998, 1092
NlaIV	GGNNCC	6 cut(s)	7, 297, 416, 633, 750, 885
NmuCI	GTSAC	1 cut(s)	61
NsbI	TGCGCA	2 cut(s)	368, 993
NspI	RCATGY	1 cut(s)	569
PciI	ACATGT	1 cut(s)	565
PctI	GAATGC	2 cut(s)	1156, 1165
PdmI	GAANNNNTTC	1 cut(s)	10
PfeI	GAWTC	4 cut(s)	90, 442, 928, 1016
PflFI	GACNNNGTC	1 cut(s)	941
PkrI	GCNGC	3 cut(s)	346, 466, 865
Ple19I	CGATCG	1 cut(s)	796
PleI	GAGTC	2 cut(s)	358, 680
PpsI	GAGTC	2 cut(s)	358, 680
PscI	ACATGT	1 cut(s)	565
Psp6I	CCWGG	7 cut(s)	203, 331, 666, 739, 826, 905, 1059
PspGI	CCWGG	7 cut(s)	203, 331, 666, 739, 826, 905, 1059
PspN4I	GGNNCC	6 cut(s)	7, 297, 416, 633, 750, 885
PspPI	GGNCC	3 cut(s)	184, 631, 943
PsyI	GACNNNGTC	1 cut(s)	941
PvuI	CGATCG	1 cut(s)	796
PvuII	CAGCTG	1 cut(s)	347
RsaI	GTAC	3 cut(s)	176, 280, 416
RsaNI	GTAC	3 cut(s)	175, 279, 415
RseI	CAYNNNNRTG	3 cut(s)	513, 570, 684
SaqAI	TTAA	4 cut(s)	125, 684, 764, 1170
SatI	GCNGC	3 cut(s)	345, 465, 864
Sau3AI	GATC	3 cut(s)	166, 793, 1186
Sau96I	GGNCC	3 cut(s)	184, 631, 943
SchI	GAGTC	2 cut(s)	359, 681
ScrFI	CCNGG	7 cut(s)	205, 333, 668, 741, 828, 907, 1061
SduI	GDGCHC	2 cut(s)	807, 839
SfaNI	GCATC	3 cut(s)	451, 625, 1128
SinI	GGWCC	2 cut(s)	184, 943
SmiMI	CAYNNNNRTG	3 cut(s)	513, 570, 684
Sse9I	AATT	4 cut(s)	213, 336, 495, 1195
SsiI	CCGC	3 cut(s)	23, 1070, 1154
SspI	AATATT	1 cut(s)	457
SspMI	CTAG	2 cut(s)	309, 897
StyD4I	CCNGG	7 cut(s)	203, 331, 666, 739, 826, 905, 1059
StyI	CCWWGG	3 cut(s)	410, 946, 1088
TaaI	ACNGT	3 cut(s)	433, 817, 1042
TaiI	ACGT	1 cut(s)	176
TaqI	TCGA	2 cut(s)	675, 1199
TasI	AATT	4 cut(s)	213, 336, 495, 1195
TfiI	GAWTC	4 cut(s)	90, 442, 928, 1016
Tru1I	TTAA	4 cut(s)	125, 684, 764, 1170
Tru9I	TTAA	4 cut(s)	125, 684, 764, 1170
TscAI	CASTG	6 cut(s)	25, 394, 474, 822, 844, 1028
TseFI	GTSAC	1 cut(s)	61
TseI	GCWGC	3 cut(s)	344, 464, 863
Tsp45I	GTSAC	1 cut(s)	61
TspDTI	ATGAA	3 cut(s)	497, 675, 1022
TspGWI	ACGGA	1 cut(s)	566
TspRI	CASTG	6 cut(s)	25, 394, 474, 822, 844, 1028
Tth111I	GACNNNGTC	1 cut(s)	941
VneI	GTGCAC	2 cut(s)	803, 835
VpaK11BI	GGWCC	2 cut(s)	184, 943
XapI	RAATTY	1 cut(s)	336
XbaI	TCTAGA	1 cut(s)	896
XceI	RCATGY	1 cut(s)	569
XmnI	GAANNNNTTC	1 cut(s)	10
XspI	CTAG	2 cut(s)	309, 897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.