AT1G69670

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
26201986 .. 26204795
2810 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G69670.1

Sequence Viewer

Length: 2199 bp
ATGAGTAATCAGAAGAAGAGAAATTTCCAGATTGAAGCGTTTAAGCAACGAGTCGTCGTTGATCCAAAATACGCCGATAAAACTTGGAAGATCCTTGAACATGCGATTCATGAGATTTACAATCACAACGCTAGTGGTCTCAGTTTCGAAGAGCTTTACAGAAACGCATACAACATGGTTCTACATAAGTATGGTGATAAGCTTTATACTGGACTTGTTACCACTATGACATTTCATCTCAAAGAGATATGTAAGTCTATTGAAGAAGCTCAAGGAGGAGCATTTTTAGAATTGCTTAATAGGAAATGGAATGATCATAACAAAGCGTTGCAAATGATTAGGGATATTCTCATGTATATGGATCGTACTTACGTTTCTACTACTAAGAAAACTCATGTTCATGAGCTTGGACTTCATCTCTGGAGAGATAATGTTGTGTATTCGAGTAAGATTCAGACTAGGCTATTGAATACGCTTCTTGATTTAGTTCATAAGGAACGGACTGGTGAAGTTATAGATAGGGTGTTGATGAGGAATGTGATTAAGATGTTTATGGATTTAGGTGAATCTGTTTATCAAGATGATTTTGAGAAGCCGTTTTTGGAAGCTTCTGCTGAGTTTTATAAGGTTGAGTCAATGGAGTTTATTGAGTCTTGTGATTGTGGTGAGTATTTGAAGAAAGCTGAGAAGCCTTTAGTGGAAGAAGTCGAAAGGGTTGTGAATTATTTGGATGCTAAGAGCGAAGCGAAGATTACTAGTGTGGTTGAAAGAGAGATGATTGCTAACCATGTGCAGAGACTAGTTCATATGGAGAATTCAGGTTTGGTTAATATGCTTTTGAATGATAAGTATGAGGATATGGGTAGAATGTATAGTTTGTTCCGTAGGGTTGCTAATGGTCTTGTAACGGTTAGAGATGTTATGACTTTGCATCTTAGGGAAATGGGAAAACAGTTGGTTACTGATCCAGAGAAATCAAAGGATCCGGTTGAATTTGTGCAGCGTCTATTGGATGAGCGGGATAAGTATGACAGAATTATCAACATGGCATTTAACAACGATAAGACGTTCCAGAATGCGCTAAATTCTTCGTTTGAGTATTTCGTCAACTTGAACACACGTTCTCCTGAGTTTATCTCCCTGTTTGTTGATGATAAGCTACGAAAAGGACTAAAAGGTGTGGGAGAGGAGGATGTCGATCTTATTCTTGATAAGGTGATGATGTTGTTTCGCTACTTACAGGAGAAAGACGTTTTTGAGAAATATTACAAACAGCATCTGGCGAAAAGGCTTTTATCTGGAAAAACTGTGTCGGATGATGCAGAGAGGAATCTGATAGTGAAACTGAAGACGGAATGTGGGTATCAATTCACTTCGAAACTTGAAGGTATGTTCACTGACATGAAGACCTCACACGACACGCTGCTAGGATTTTATAATAGCCATCCCGAGCTTTCAGAAGGACCTACACTTGTTGTTCAGGTTCTCACAACCGGTTCTTGGCCCACACAGCCAACCATACAATGTAACCTACCTGCAGAAGTTTCTGTTCTGTGTGAGAAGTTCAGGTCATATTACCTCGGGACTCACACCGGTAGGAGATTGTCTTGGCAAACGAATATGGGAACAGCAGATATCAAAGCAGTGTTTGGAAAGGGTCAGAAGCATGAACTAAACGTTTCGACTTTCCAAATGTGTGTCCTTATGTTGTTCAACAACTCTGATCGACTAAGCTACAAAGAGATCGAACAGGCAACTGAAATCCCCACCCCAGACCTAAAGCGTTGCTTGCAGTCAATGGCGTGTGTAAAAGGTAAAAACGTGCTAAGAAAAGAACCAATGAGCAAGGAGATAGCAGAGGAGGACTGGTTTGTTGTGAACGACAGGTTCGCAAGCAAGTTCTACAAAGTGAAGATAGGAACTGTGGTGGCACAAAAGGAGACAGAACCAGAGAAGCAAGAGACAAGACAGAGAGTAGAAGAAGACAGAAAACCTCAGATCGAAGCAGCCATCGTGAGGATAATGAAGTCTAGACGAGTGTTGGATCACAACAACATAATCGCAGAGGTCACCAAACAGTTGCAGACGCGGTTCTTGGCAAACCCAACAGAGATAAAGAAGAGAATTGAATCACTCATTGAGCGTGATTTCTTGGAGAGGGATAATACAGACCGGAAACTTTACCGCTATCTAGCGTAA

Protein Analysis

732

Amino Acids

85.61

Weight (kDa)

7.6

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 29 - 474 2e-160 Cullin alpha solenoid domain
Cullin_AB PF26557 495 - 630 1.1e-49 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 662 - 724 1.2e-25 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 624, 1437
Acc36I ACCTGC 1 cut(s) 1543
AccBSI CCGCTC 1 cut(s) 1018
AccII CGCG 1 cut(s) 2089
AciI CCGC 3 cut(s) 1018, 2089, 2185
AclI AACGTT 1 cut(s) 1677
AclWI GGATC 7 cut(s) 56, 85, 369, 959, 977, 990, 2052
AcsI RAATTY 4 cut(s) 22, 814, 992, 1084
AcuI CTGAAG 1 cut(s) 1367
AfaI GTAC 1 cut(s) 367
AfiI CCNNNNNNNGG 2 cut(s) 1500, 2016
AflIII ACRYGT 1 cut(s) 1118
AgeI ACCGGT 2 cut(s) 1493, 1592
AhlI ACTAGT 2 cut(s) 755, 799
AjuI GAANNNNNNNTTGG 4 cut(s) 584, 616, 806, 838
AluBI AGCT 9 cut(s) 154, 202, 269, 406, 608, 683, 1159, 1453, 1734
AluI AGCT 9 cut(s) 154, 202, 269, 406, 608, 683, 1159, 1453, 1734
Alw26I GTCTC 4 cut(s) 143, 790, 1934, 1955
AlwI GGATC 7 cut(s) 56, 85, 369, 959, 977, 990, 2052
AlwNI CAGNNNCTG 1 cut(s) 1279
Ama87I CYCGRG 2 cut(s) 1448, 1580
AoxI GGCC 1 cut(s) 1502
ApeKI GCWGC 3 cut(s) 1000, 1423, 2006
ApoI RAATTY 4 cut(s) 22, 814, 992, 1084
AsiGI ACCGGT 2 cut(s) 1493, 1592
AspLEI GCGC 1 cut(s) 1081
AspS9I GGNCC 2 cut(s) 1463, 1503
AsuHPI GGTGA 6 cut(s) 206, 518, 575, 677, 1228, 2062
AsuII TTCGAA 2 cut(s) 147, 1376
AvaI CYCGRG 2 cut(s) 1448, 1580
AvaII GGWCC 1 cut(s) 1463
BamHI GGATCC 1 cut(s) 982
BbsI GAAGAC 3 cut(s) 1355, 1412, 1989
BbvI GCAGC 3 cut(s) 1012, 1410, 2018
BccI CCATC 2 cut(s) 1452, 2018
BceAI ACGGC 1 cut(s) 580
BclI TGATCA 1 cut(s) 313
BcoDI GTCTC 4 cut(s) 143, 790, 1934, 1955
BcuI ACTAGT 2 cut(s) 755, 799
BfaI CTAG 7 cut(s) 132, 459, 756, 800, 1427, 2031, 2192
BfmI CTRYAG 1 cut(s) 1536
BfuAI ACCTGC 1 cut(s) 1543
BisI GCNGC 3 cut(s) 1001, 1424, 2007
BlsI GCNGC 3 cut(s) 1002, 1425, 2008
Bme18I GGWCC 1 cut(s) 1463
BmeT110I CYCGRG 2 cut(s) 1448, 1580
BmgT120I GGNCC 2 cut(s) 1463, 1503
BmiI GGNNCC 1 cut(s) 984
BmsI GCATC 4 cut(s) 721, 940, 1285, 1309
BpiI GAAGAC 3 cut(s) 1355, 1412, 1989
BplI GAGNNNNNCTC 2 cut(s) 1121, 1153
BpmI CTGGAG 1 cut(s) 442
Bpu14I TTCGAA 2 cut(s) 147, 1376
BpuEI CTTGAG 1 cut(s) 255
BsaBI GATNNNNATC 1 cut(s) 1197
BsaI GGTCTC 1 cut(s) 143
BsaJI CCNNGG 1 cut(s) 1579
BsaWI WCCGGW 4 cut(s) 985, 1493, 1592, 2172
BsaXI ACNNNNNCTCC 4 cut(s) 1108, 1138, 1853, 1883
Bsc4I CCNNNNNNNGG 2 cut(s) 1500, 2016
Bse118I RCCGGY 2 cut(s) 1493, 1592
Bse1I ACTGG 3 cut(s) 214, 508, 1871
Bse8I GATNNNNATC 1 cut(s) 1197
BseDI CCNNGG 1 cut(s) 1579
BseGI GGATG 5 cut(s) 736, 1018, 1198, 1321, 1444
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 2 cut(s) 1500, 2016
BseMII CTCAG 5 cut(s) 154, 606, 675, 1119, 2009
BseNI ACTGG 3 cut(s) 214, 508, 1871
BseRI GAGGAG 3 cut(s) 291, 1202, 1874
BseXI GCAGC 3 cut(s) 1012, 1410, 2018
BsgI GTGCAG 2 cut(s) 812, 1019
Bsh1236I CGCG 1 cut(s) 2089
BshFI GGCC 1 cut(s) 1504
BshTI ACCGGT 2 cut(s) 1493, 1592
BsiHKCI CYCGRG 2 cut(s) 1448, 1580
BsiSI CCGG 4 cut(s) 986, 1494, 1593, 2173
BslFI GGGAC 1 cut(s) 1597
BslI CCNNNNNNNGG 2 cut(s) 1500, 2016
BsmAI GTCTC 4 cut(s) 143, 790, 1934, 1955
BsmFI GGGAC 1 cut(s) 1597
BsmI GAATGC 1 cut(s) 1081
BsnI GGCC 1 cut(s) 1504
Bso31I GGTCTC 1 cut(s) 143
BsoBI CYCGRG 2 cut(s) 1448, 1580
Bsp119I TTCGAA 2 cut(s) 147, 1376
BspACI CCGC 3 cut(s) 1018, 2089, 2185
BspANI GGCC 1 cut(s) 1504
BspCNI CTCAG 5 cut(s) 153, 607, 676, 1120, 2008
BspFNI CGCG 1 cut(s) 2089
BspHI TCATGA 2 cut(s) 109, 400
BspLI GGNNCC 1 cut(s) 984
BspMAI CTGCAG 1 cut(s) 1540
BspMI ACCTGC 1 cut(s) 1543
BspPI GGATC 7 cut(s) 56, 85, 369, 959, 977, 990, 2052
BspQI GCTCTTC 1 cut(s) 144
BspT104I TTCGAA 2 cut(s) 147, 1376
BspTNI GGTCTC 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 1018
BsrFI RCCGGY 2 cut(s) 1493, 1592
BsrI ACTGG 3 cut(s) 214, 508, 1871
BssAI RCCGGY 2 cut(s) 1493, 1592
BssECI CCNNGG 1 cut(s) 1579
Bst4CI ACNGT 5 cut(s) 910, 954, 1309, 1924, 2079
Bst6I CTCTTC 3 cut(s) 11, 144, 2114
BstBI TTCGAA 2 cut(s) 147, 1376
BstC8I GCNNGC 2 cut(s) 1790, 1894
BstEII GGTNACC 1 cut(s) 2068
BstF5I GGATG 5 cut(s) 736, 1018, 1198, 1321, 1444
BstFNI CGCG 1 cut(s) 2089
BstHHI GCGC 1 cut(s) 1081
BstMAI GTCTC 4 cut(s) 143, 790, 1934, 1955
BstMWI GCNNNNNNNGC 2 cut(s) 1510, 1789
BstNSI RCATGY 1 cut(s) 104
BstPI GGTNACC 1 cut(s) 2068
BstSFI CTRYAG 1 cut(s) 1536
BstUI CGCG 1 cut(s) 2089
BstV1I GCAGC 3 cut(s) 1012, 1410, 2018
BstV2I GAAGAC 3 cut(s) 1355, 1412, 1989
BstX2I RGATCY 2 cut(s) 90, 982
BstYI RGATCY 2 cut(s) 90, 982
BsuRI GGCC 1 cut(s) 1504
BtsCI GGATG 5 cut(s) 736, 1018, 1198, 1321, 1444
BtsI GCAGTG 1 cut(s) 1650
BtsIMutI CAGTG 2 cut(s) 1395, 1650
BveI ACCTGC 1 cut(s) 1543
Cac8I GCNNGC 2 cut(s) 1790, 1894
CaiI CAGNNNCTG 1 cut(s) 1279
CciI TCATGA 2 cut(s) 109, 400
CfoI GCGC 1 cut(s) 1081
Cfr10I RCCGGY 2 cut(s) 1493, 1592
Cfr13I GGNCC 2 cut(s) 1463, 1503
CseI GACGC 2 cut(s) 992, 2095
Csp6I GTAC 1 cut(s) 366
CspAI ACCGGT 2 cut(s) 1493, 1592
CspCI CAANNNNNGTGG 2 cut(s) 115, 150
CviQI GTAC 1 cut(s) 366
Eam1104I CTCTTC 3 cut(s) 11, 144, 2114
EarI CTCTTC 3 cut(s) 11, 144, 2114
Eco31I GGTCTC 1 cut(s) 143
Eco32I GATATC 1 cut(s) 1636
Eco47I GGWCC 1 cut(s) 1463
Eco57I CTGAAG 1 cut(s) 1367
Eco88I CYCGRG 2 cut(s) 1448, 1580
Eco91I GGTNACC 1 cut(s) 2068
EcoO109I RGGNCCY 1 cut(s) 1463
EcoO65I GGTNACC 1 cut(s) 2068
EcoRI GAATTC 1 cut(s) 814
EcoRV GATATC 1 cut(s) 1636
FalI AAGNNNNNCTT 2 cut(s) 1772, 1804
FaqI GGGAC 1 cut(s) 1597
FauI CCCGC 1 cut(s) 1011
FauNDI CATATG 1 cut(s) 807
FbaI TGATCA 1 cut(s) 313
Fnu4HI GCNGC 3 cut(s) 1001, 1424, 2007
FokI GGATG 5 cut(s) 743, 1025, 1205, 1328, 1431
Fsp4HI GCNGC 3 cut(s) 1001, 1424, 2007
FspBI CTAG 7 cut(s) 132, 459, 756, 800, 1427, 2031, 2192
GlaI GCGC 1 cut(s) 1080
GluI GCNGC 3 cut(s) 1001, 1424, 2007
GsuI CTGGAG 1 cut(s) 442
HaeIII GGCC 1 cut(s) 1504
HapII CCGG 4 cut(s) 986, 1494, 1593, 2173
HgaI GACGC 2 cut(s) 992, 2095
HhaI GCGC 1 cut(s) 1081
Hin6I GCGC 1 cut(s) 1079
HinP1I GCGC 1 cut(s) 1079
HincII GTYRAC 1 cut(s) 1108
HindII GTYRAC 1 cut(s) 1108
HindIII AAGCTT 2 cut(s) 200, 606
HinfI GANTC 9 cut(s) 51, 106, 451, 566, 632, 650, 1330, 1585, 2129
HpaII CCGG 4 cut(s) 986, 1494, 1593, 2173
HphI GGTGA 6 cut(s) 206, 518, 575, 677, 1228, 2062
Hpy166II GTNNAC 3 cut(s) 1108, 1395, 1879
Hpy188I TCNGA 8 cut(s) 12, 456, 1315, 1335, 1459, 1662, 1723, 1998
Hpy8I GTNNAC 3 cut(s) 1108, 1395, 1879
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 2 cut(s) 1379, 1454
HpyCH4III ACNGT 5 cut(s) 910, 954, 1309, 1924, 2079
HpyCH4IV ACGT 6 cut(s) 372, 1067, 1120, 1251, 1677, 1821
HpyCH4V TGCA 8 cut(s) 331, 793, 931, 1000, 1322, 1538, 1792, 2083
HpyF10VI GCNNNNNNNGC 2 cut(s) 1510, 1789
HpySE526I ACGT 6 cut(s) 372, 1067, 1120, 1251, 1677, 1821
HspAI GCGC 1 cut(s) 1079
Ksp22I TGATCA 1 cut(s) 313
LguI GCTCTTC 1 cut(s) 144
LmnI GCTCC 1 cut(s) 278
Lsp1109I GCAGC 3 cut(s) 1012, 1410, 2018
LweI GCATC 4 cut(s) 721, 940, 1285, 1309
MaeI CTAG 7 cut(s) 132, 459, 756, 800, 1427, 2031, 2192
MaeII ACGT 6 cut(s) 372, 1067, 1120, 1251, 1677, 1821
MaeIII GTNAC 5 cut(s) 217, 904, 958, 1526, 2068
MbiI CCGCTC 1 cut(s) 1018
MflI RGATCY 2 cut(s) 90, 982
MluCI AATT 9 cut(s) 22, 290, 721, 814, 992, 1035, 1084, 1367, 2124
MlyI GAGTC 4 cut(s) 60, 641, 659, 1579
MmeI TCCRAC 2 cut(s) 1293, 2022
MseI TTAA 5 cut(s) 42, 297, 543, 828, 1053
MslI CAYNNNNRTG 4 cut(s) 189, 356, 399, 1400
MspI CCGG 4 cut(s) 986, 1494, 1593, 2173
Mva1269I GAATGC 1 cut(s) 1081
MvnI CGCG 1 cut(s) 2089
MwoI GCNNNNNNNGC 2 cut(s) 1510, 1789
NdeI CATATG 1 cut(s) 807
NlaIV GGNNCC 1 cut(s) 984
NmuCI GTSAC 1 cut(s) 2068
NspI RCATGY 1 cut(s) 104
NspV TTCGAA 2 cut(s) 147, 1376
PagI TCATGA 2 cut(s) 109, 400
PciSI GCTCTTC 1 cut(s) 144
PctI GAATGC 1 cut(s) 1081
PfeI GAWTC 5 cut(s) 106, 451, 566, 1330, 2129
PinAI ACCGGT 2 cut(s) 1493, 1592
PkrI GCNGC 3 cut(s) 1002, 1425, 2008
PleI GAGTC 4 cut(s) 59, 640, 658, 1579
PpsI GAGTC 4 cut(s) 59, 640, 658, 1579
PpuMI RGGWCCY 1 cut(s) 1463
PsiI TTATAA 2 cut(s) 624, 1437
Psp1406I AACGTT 1 cut(s) 1677
Psp5II RGGWCCY 1 cut(s) 1463
PspEI GGTNACC 1 cut(s) 2068
PspN4I GGNNCC 1 cut(s) 984
PspPI GGNCC 2 cut(s) 1463, 1503
PspPPI RGGWCCY 1 cut(s) 1463
PsrI GAACNNNNNNTAC 2 cut(s) 863, 895
PstI CTGCAG 1 cut(s) 1540
PstNI CAGNNNCTG 1 cut(s) 1279
PsuI RGATCY 2 cut(s) 90, 982
RsaI GTAC 1 cut(s) 367
RsaNI GTAC 1 cut(s) 366
RseI CAYNNNNRTG 4 cut(s) 189, 356, 399, 1400
SapI GCTCTTC 1 cut(s) 144
SaqAI TTAA 5 cut(s) 42, 297, 543, 828, 1053
SatI GCNGC 3 cut(s) 1001, 1424, 2007
Sau96I GGNCC 2 cut(s) 1463, 1503
SchI GAGTC 4 cut(s) 60, 641, 659, 1579
SfaNI GCATC 4 cut(s) 721, 940, 1285, 1309
SfcI CTRYAG 1 cut(s) 1536
SfuI TTCGAA 2 cut(s) 147, 1376
SinI GGWCC 1 cut(s) 1463
SmiMI CAYNNNNRTG 4 cut(s) 189, 356, 399, 1400
SmlI CTYRAG 1 cut(s) 270
SmoI CTYRAG 1 cut(s) 270
SpeI ACTAGT 2 cut(s) 755, 799
Sse9I AATT 9 cut(s) 22, 290, 721, 814, 992, 1035, 1084, 1367, 2124
SsiI CCGC 3 cut(s) 1018, 2089, 2185
SspI AATATT 1 cut(s) 1265
SspMI CTAG 7 cut(s) 132, 459, 756, 800, 1427, 2031, 2192
TaaI ACNGT 5 cut(s) 910, 954, 1309, 1924, 2079
TaiI ACGT 6 cut(s) 375, 1070, 1123, 1254, 1680, 1824
TaqI TCGA 9 cut(s) 147, 443, 708, 1197, 1376, 1682, 1726, 1746, 2001
TasI AATT 9 cut(s) 22, 290, 721, 814, 992, 1035, 1084, 1367, 2124
TfiI GAWTC 5 cut(s) 106, 451, 566, 1330, 2129
Tru1I TTAA 5 cut(s) 42, 297, 543, 828, 1053
Tru9I TTAA 5 cut(s) 42, 297, 543, 828, 1053
TscAI CASTG 2 cut(s) 1402, 1650
TseFI GTSAC 1 cut(s) 2068
TseI GCWGC 3 cut(s) 1000, 1423, 2006
Tsp45I GTSAC 1 cut(s) 2068
TspDTI ATGAA 9 cut(s) 98, 224, 389, 404, 479, 794, 1418, 1683, 2039
TspGWI ACGGA 3 cut(s) 514, 872, 1367
TspRI CASTG 2 cut(s) 1402, 1650
VpaK11BI GGWCC 1 cut(s) 1463
XapI RAATTY 4 cut(s) 22, 814, 992, 1084
XbaI TCTAGA 1 cut(s) 2030
XceI RCATGY 1 cut(s) 104
XspI CTAG 7 cut(s) 132, 459, 756, 800, 1427, 2031, 2192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.