Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0003908

Physical Location & Seq

Genomic Coordinates Forward (+)

2478129 .. 2481149

Gene Structure 3021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g04080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGAGTGCTCAGAAGAAGAGGAACTTCCAAATTGAGGCCTTCAAGCATCGGGTCGTGGTTGATCCCAAGTACGCTGAGAAGACGTGGAAGATCCTGGAGCATGCGATTCATGAAATTTACAATCACAACGCTAGCGGGCTTAGCTTCGAGGAGCTCTACAGGAATGCTTACAATATGGTGCTGCACAAATTTGGAGAGAAACTCTACTCTGGTCTGGTGACAACCATGACTTATCATCTAAAAGATATATCTAAGTCAATTGAAGCTGCACAAGGTGAGTTGTTTTTGGAAGAGCTGAACCGGAAGTGGGCAGACCATAACAAAGCGTTGCAGATGGTTCGAGACATATTGATGTACATGGACAGGACTTTCATCCCAAGCACCCACAAAACCCCTGTTCATGAGCTTGGGTTAAACCTGTGGAGGGATGTTGTTATCCACGCTACCAAAACCCAGTTGAGGCTGTTGGATACACTTCTTGAGCTTGTGCATAGAGAAAGGAGTGGTGAAGTAATTAACAGAGGCTTGATGAGGAATATTATAAAAATGTTAATGGATTTAGGTTCTACTGTTTATCAAGACGACTTTGAGAAGCATTTTCTTGAGGTTTCAGCTGATTTTTACCGCTGTGAGTCTCAGGAGTTCATAGAGTCATGTGATTGTGGGAACTATTTAAAGAAGGCTGAGAGACGCTTAATTGAAGAAATGGAAAGAGTCTCCCAGTATTTGGATGCTAGAAGTGAAGCTAAGATAACTAATGTGGTGGAGAAGGAGATGATTGAAAATCACATGAACAGACTAGTTCATATGGAGAGCTCAGGTTTAGTTAATATGCTTGTGGATGACAAATATGACGACTTGGGAAGAATGTATAGCTTGTTTCGCAGGGTGCAGAATGGACTTGTAATAGTACGAGATGTCATGACCGCTTACATCCGAGATACTGGTAAGCAGCTAGTTACTGACCCAGAAAGGTTAAGGGATCCTGTAGATTTTGTGCAGCGTCTCCTGGATTTGAAGGATAAATATGACAAAGTTATCAGCTCGGCGTTTAACGATGACAAAACATTCCAAAATGCTCTAAATTCCTCCTTTGAATACTTCATTAATTTGAATGCCCGGTCCCCAGAGTTCATATCTCTGTTTGTGGATGACAAGCTTCGGAAAGGTCTAAGAGGGGTTAGTGAGGAGGATGTAGAGGTTGTACTGGACAAGGTCATGATGCTTTTCCGTTATCTTCATGAGAAAGATGTCTTTGAAAAGTATTACAAGCAACACTTGGCAAAGAGGCTTCTTTCTGGGAAGACTGTTTCTGATGATGCGGAAAGAAGTCTGATTGTTAAGCTCAAAACAGAATGTGGATATCAGTTTACTTCTAAGTTGGAGGGTATGTTCACTGATATGAAGACCTCTCAGGATACAATGCATGAATTCTACTCAACTGTCGGAGCTCAGTTAGGCGACAGCCCAACACTAACTGTCCAGGTCCTCACCACAGGTTCATGGCCTACTCAACCAAGTGCGACCTGCAACCTTCCAGCAGAAATTTTGTGGGTATGTGAGAAGTTCAAGAGTTACTATCTTGGGACCCATACTGGCCGGAGATTGTCCTGGCAAACTAATATGGGCACAGCTGATTTGAAATCAACCTTTGGAAAGGGCCAGAAGCATGAGCTGAATGTTTCCACATATCAGATGTGTGTACTGATGTTATTTAACGATGCTGACCGGTTGACGTATAAGAAAATTGAGCAGGCTACAGAGATACCAGCCGTTGACTTGAAGAGGTGCCTGCAATCTCTGGCCTGTGTCAAGGGGAAGAATGTTCTTCGGAAGGAGCCAATGAGCAAGGACATAGCTGAGGAGGATGTCTTCTTCTTTAATGACAAGTTCACAAGCAAGTCCTTCAAGGTAAAGATAGGTACTGTGGTTGCACAAAGGGAGTCCGAACCAGAAAATCAAGAAACCCGACAGAGAGTAGAGGAAGACAGGAAGCCCCAGATTGAAGCAGCAATTGTGAGGATCGATGAAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04120 ko04340 ko04341 map04120 map04340 map04341

Pfam Domains

Protein Families

Cullin Cullin_Nedd8

Protein Analysis

679

Amino Acids

78.87

Weight (kDa)

6.38

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cullin	PF00888	29 - 475	1.8e-162	Cullin alpha solenoid domain
Cullin_AB	PF26557	496 - 631	3e-50	Cullin alpha+beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26830 AT1G69670 AT1G69670
fragaria_vesca	FvH4_4g31500 FvH4_6g48910
malus_domestica	MD09G1049800.v1.1 MD16G1074600.v1.1 MD17G1050100.v1.1
prunus_persica	Prupe.1G272800_v2.0.a1 Prupe.3G269000_v2.0.a1
pyrus_communis	pycom111g04080 pycom16g06460 pycom17g04490 pycom17g04500
rosa_chinensis	RchiOBHm_Chr2g0168721 RchiOBHm_Chr4g0439991
rosa_laevigata	RLG00000006217 RLG00000021804
rosa_multiflora	Rmu_sc0006000.1_g000007 Rmu_sc0034426.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082740 Rroxscaffold_5G00380940
rosa_rugosa	Rorug02G0535000 Rorug04G0323000
rosa_samantha	Rh2AG605700 Rh2BG618700 Rh2CG586800 Rh2DG629200 Rh4AG374100 Rh4BG386400 Rh4CG400900 Rh4DG380700
rosa_wichuraiana	Rw2G050210 Rw4G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	542
Acc36I	ACCTGC	1 cut(s)	1535
AccB1I	GGYRCC	1 cut(s)	1788
AccB7I	CCANNNNNTGG	1 cut(s)	727
AciI	CCGC	4 cut(s)	135, 625, 927, 1322
AclWI	GGATC	5 cut(s)	56, 85, 977, 990, 2030
AcoI	YGGCCR	1 cut(s)	1597
AcsI	RAATTY	5 cut(s)	114, 188, 1084, 1430, 1545
AdeI	CACNNNGTG	1 cut(s)	275
AfaI	GTAC	6 cut(s)	71, 356, 912, 1206, 1704, 1924
AfiI	CCNNNNNNNGG	5 cut(s)	34, 307, 424, 459, 727
AgeI	ACCGGT	1 cut(s)	1728
AhlI	ACTAGT	1 cut(s)	799
AjiI	CACGTC	1 cut(s)	84
AjnI	CCWGG	4 cut(s)	93, 1008, 1482, 1610
AloI	GAACNNNNNNTCC	2 cut(s)	1376, 1408
Alw21I	GWGCWC	4 cut(s)	10, 156, 818, 1453
Alw26I	GTCTC	5 cut(s)	336, 639, 682, 721, 1010
AlwI	GGATC	5 cut(s)	56, 85, 977, 990, 2030
AoxI	GGCC	5 cut(s)	36, 1505, 1597, 1660, 1803
ApeKI	GCWGC	5 cut(s)	181, 266, 952, 1000, 2009
ApoI	RAATTY	5 cut(s)	114, 188, 1084, 1430, 1545
AseI	ATTAAT	1 cut(s)	1107
AsiGI	ACCGGT	1 cut(s)	1728
AspS9I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
AsuC2I	CCSGG	1 cut(s)	1120
AsuHPI	GGTGA	4 cut(s)	229, 287, 518, 1483
AsuNHI	GCTAGC	1 cut(s)	131
AvaII	GGWCC	3 cut(s)	1122, 1486, 1587
BaeGI	GKGCMC	1 cut(s)	1631
BaeI	ACNNNNGTAYC	2 cut(s)	1914, 1947
BamHI	GGATCC	1 cut(s)	982
BanI	GGYRCC	1 cut(s)	1788
BanII	GRGCYC	3 cut(s)	156, 818, 1453
BbsI	GAAGAC	5 cut(s)	86, 1310, 1412, 1864, 1992
Bbv12I	GWGCWC	4 cut(s)	10, 156, 818, 1453
BbvCI	CCTCAGC	1 cut(s)	1860
BbvI	GCAGC	5 cut(s)	168, 253, 964, 1012, 2021
BccI	CCATC	1 cut(s)	328
BceAI	ACGGC	1 cut(s)	1757
BcgI	CGANNNNNNTGC	2 cut(s)	320, 354
BciT130I	CCWGG	4 cut(s)	95, 1010, 1484, 1612
BciVI	GTATCC	2 cut(s)	463, 1411
BcnI	CCSGG	1 cut(s)	1120
BcoDI	GTCTC	5 cut(s)	336, 639, 682, 721, 1010
BcuI	ACTAGT	1 cut(s)	799
BfaI	CTAG	5 cut(s)	132, 735, 800, 956, 2035
BfmI	CTRYAG	3 cut(s)	157, 987, 1758
BfuAI	ACCTGC	1 cut(s)	1535
BfuI	GTATCC	2 cut(s)	463, 1411
BisI	GCNGC	5 cut(s)	182, 267, 953, 1001, 2010
BlpI	GCTNAGC	1 cut(s)	140
BlsI	GCNGC	5 cut(s)	183, 268, 954, 1002, 2011
Bme1390I	CCNGG	5 cut(s)	95, 1010, 1120, 1484, 1612
Bme18I	GGWCC	3 cut(s)	1122, 1486, 1587
BmgBI	CACGTC	1 cut(s)	84
BmgT120I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
BmiI	GGNNCC	6 cut(s)	984, 1124, 1588, 1589, 1790, 1839
BmrFI	CCNGG	5 cut(s)	95, 1010, 1120, 1484, 1612
BmrI	ACTGGG	2 cut(s)	448, 715
BmsI	GCATC	5 cut(s)	55, 721, 1212, 1309, 1711
BmtI	GCTAGC	1 cut(s)	135
BmuI	ACTGGG	2 cut(s)	448, 715
BpiI	GAAGAC	5 cut(s)	86, 1310, 1412, 1864, 1992
BplI	GAGNNNNNCTC	2 cut(s)	186, 218
BpmI	CTGGAG	1 cut(s)	116
Bpu10I	CCTNAGC	2 cut(s)	817, 1860
Bpu1102I	GCTNAGC	1 cut(s)	140
BpuEI	CTTGAG	2 cut(s)	500, 623
BpuMI	CCSGG	1 cut(s)	1120
Bsa29I	ATCGAT	1 cut(s)	2025
BsaWI	WCCGGW	2 cut(s)	300, 1728
BsaXI	ACNNNNNCTCC	2 cut(s)	1376, 1406
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 307, 424, 459, 727
Bse118I	RCCGGY	1 cut(s)	1728
Bse1I	ACTGG	5 cut(s)	454, 721, 949, 1212, 1600
BseBI	CCWGG	4 cut(s)	95, 1010, 1484, 1612
BseCI	ATCGAT	1 cut(s)	2025
BseGI	GGATG	8 cut(s)	372, 433, 736, 847, 933, 1156, 1198, 1873
BseLI	CCNNNNNNNGG	5 cut(s)	34, 307, 424, 459, 727
BseMII	CTCAG	8 cut(s)	23, 66, 650, 675, 831, 1427, 1466, 1851
BseNI	ACTGG	5 cut(s)	454, 721, 949, 1212, 1600
BseRI	GAGGAG	3 cut(s)	164, 1202, 1877
BseSI	GKGCMC	1 cut(s)	1631
BseXI	GCAGC	5 cut(s)	168, 253, 964, 1012, 2021
BsgI	GTGCAG	4 cut(s)	167, 252, 911, 1019
BshFI	GGCC	5 cut(s)	38, 1507, 1599, 1662, 1805
BshNI	GGYRCC	1 cut(s)	1788
BshTI	ACCGGT	1 cut(s)	1728
BshVI	ATCGAT	1 cut(s)	2025
BsiHKAI	GWGCWC	4 cut(s)	10, 156, 818, 1453
BsiSI	CCGG	4 cut(s)	301, 1120, 1600, 1729
BslFI	GGGAC	2 cut(s)	1108, 1600
BslI	CCNNNNNNNGG	5 cut(s)	34, 307, 424, 459, 727
BsmAI	GTCTC	5 cut(s)	336, 639, 682, 721, 1010
BsmBI	CGTCTC	2 cut(s)	682, 1010
BsmFI	GGGAC	2 cut(s)	1108, 1600
BsmI	GAATGC	2 cut(s)	169, 1120
BsnI	GGCC	5 cut(s)	38, 1507, 1599, 1662, 1805
Bsp1286I	GDGCHC	5 cut(s)	10, 156, 818, 1453, 1631
Bsp1407I	TGTACA	1 cut(s)	354
Bsp143I	GATC	4 cut(s)	61, 90, 982, 2022
Bsp1720I	GCTNAGC	1 cut(s)	140
BspACI	CCGC	4 cut(s)	135, 625, 927, 1322
BspANI	GGCC	5 cut(s)	38, 1507, 1599, 1662, 1805
BspCNI	CTCAG	8 cut(s)	22, 67, 649, 676, 830, 1426, 1465, 1852
BspDI	ATCGAT	1 cut(s)	2025
BspHI	TCATGA	5 cut(s)	109, 400, 921, 1218, 1240
BspLI	GGNNCC	6 cut(s)	984, 1124, 1588, 1589, 1790, 1839
BspMI	ACCTGC	1 cut(s)	1535
BspOI	GCTAGC	1 cut(s)	135
BspPI	GGATC	5 cut(s)	56, 85, 977, 990, 2030
BspQI	GCTCTTC	1 cut(s)	285
BspT107I	GGYRCC	1 cut(s)	1788
BsrFI	RCCGGY	1 cut(s)	1728
BsrGI	TGTACA	1 cut(s)	354
BsrI	ACTGG	5 cut(s)	454, 721, 949, 1212, 1600
BssAI	RCCGGY	1 cut(s)	1728
BssMI	GATC	4 cut(s)	61, 90, 982, 2022
Bst2UI	CCWGG	4 cut(s)	95, 1010, 1484, 1612
Bst4CI	ACNGT	5 cut(s)	571, 1309, 1444, 1480, 1927
Bst6I	CTCTTC	3 cut(s)	11, 285, 1778
BstAUI	TGTACA	1 cut(s)	354
BstC8I	GCNNGC	5 cut(s)	102, 133, 137, 1755, 1793
BstF5I	GGATG	8 cut(s)	372, 433, 736, 847, 933, 1156, 1198, 1873
BstKTI	GATC	4 cut(s)	64, 93, 985, 2025
BstMAI	GTCTC	5 cut(s)	336, 639, 682, 721, 1010
BstMBI	GATC	4 cut(s)	61, 90, 982, 2022
BstMWI	GCNNNNNNNGC	2 cut(s)	141, 882
BstNI	CCWGG	4 cut(s)	95, 1010, 1484, 1612
BstNSI	RCATGY	1 cut(s)	104
BstSCI	CCNGG	5 cut(s)	93, 1008, 1118, 1482, 1610
BstSFI	CTRYAG	3 cut(s)	157, 987, 1758
BstSLI	GKGCMC	1 cut(s)	1631
BstV1I	GCAGC	5 cut(s)	168, 253, 964, 1012, 2021
BstV2I	GAAGAC	5 cut(s)	86, 1310, 1412, 1864, 1992
BstX2I	RGATCY	2 cut(s)	90, 982
BstYI	RGATCY	2 cut(s)	90, 982
Bsu15I	ATCGAT	1 cut(s)	2025
BsuI	GTATCC	2 cut(s)	463, 1411
BsuRI	GGCC	5 cut(s)	38, 1507, 1599, 1662, 1805
BsuTUI	ATCGAT	1 cut(s)	2025
BtrI	CACGTC	1 cut(s)	84
BtsCI	GGATG	8 cut(s)	372, 433, 736, 847, 933, 1156, 1198, 1873
BtsIMutI	CAGTG	1 cut(s)	1395
BveI	ACCTGC	1 cut(s)	1535
Cac8I	GCNNGC	5 cut(s)	102, 133, 137, 1755, 1793
CciI	TCATGA	5 cut(s)	109, 400, 921, 1218, 1240
Cfr10I	RCCGGY	1 cut(s)	1728
Cfr13I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
ClaI	ATCGAT	1 cut(s)	2025
CseI	GACGC	2 cut(s)	699, 992
Csp6I	GTAC	6 cut(s)	70, 355, 911, 1205, 1703, 1923
CspAI	ACCGGT	1 cut(s)	1728
CviQI	GTAC	6 cut(s)	70, 355, 911, 1205, 1703, 1923
DpnI	GATC	4 cut(s)	63, 92, 984, 2024
DpnII	GATC	4 cut(s)	61, 90, 982, 2022
DraI	TTTAAA	1 cut(s)	675
DraIII	CACNNNGTG	1 cut(s)	275
EaeI	YGGCCR	1 cut(s)	1597
Eam1104I	CTCTTC	3 cut(s)	11, 285, 1778
EarI	CTCTTC	3 cut(s)	11, 285, 1778
Ecl136II	GAGCTC	3 cut(s)	154, 816, 1451
Eco147I	AGGCCT	1 cut(s)	38
Eco24I	GRGCYC	3 cut(s)	156, 818, 1453
Eco32I	GATATC	1 cut(s)	1364
Eco47I	GGWCC	3 cut(s)	1122, 1486, 1587
Eco53kI	GAGCTC	3 cut(s)	154, 816, 1451
EcoICRI	GAGCTC	3 cut(s)	154, 816, 1451
EcoO109I	RGGNCCY	2 cut(s)	1486, 1587
EcoRI	GAATTC	1 cut(s)	1430
EcoRII	CCWGG	4 cut(s)	93, 1008, 1482, 1610
EcoRV	GATATC	1 cut(s)	1364
EcoT22I	ATGCAT	1 cut(s)	1428
EcoT38I	GRGCYC	3 cut(s)	156, 818, 1453
Esp3I	CGTCTC	2 cut(s)	682, 1010
FalI	AAGNNNNNCTT	4 cut(s)	8, 40, 1262, 1294
FaqI	GGGAC	2 cut(s)	1108, 1600
FauI	CCCGC	1 cut(s)	128
FauNDI	CATATG	1 cut(s)	807
Fnu4HI	GCNGC	5 cut(s)	182, 267, 953, 1001, 2010
FokI	GGATG	8 cut(s)	359, 440, 743, 854, 920, 1163, 1205, 1880
FriOI	GRGCYC	3 cut(s)	156, 818, 1453
Fsp4HI	GCNGC	5 cut(s)	182, 267, 953, 1001, 2010
FspBI	CTAG	5 cut(s)	132, 735, 800, 956, 2035
GluI	GCNGC	5 cut(s)	182, 267, 953, 1001, 2010
GsuI	CTGGAG	1 cut(s)	116
HaeIII	GGCC	5 cut(s)	38, 1507, 1599, 1662, 1805
HapII	CCGG	4 cut(s)	301, 1120, 1600, 1729
HgaI	GACGC	2 cut(s)	699, 992
HincII	GTYRAC	2 cut(s)	1734, 1777
HindII	GTYRAC	2 cut(s)	1734, 1777
HindIII	AAGCTT	1 cut(s)	1157
HinfI	GANTC	5 cut(s)	106, 632, 650, 714, 1943
HpaII	CCGG	4 cut(s)	301, 1120, 1600, 1729
HphI	GGTGA	4 cut(s)	229, 287, 518, 1483
Hpy166II	GTNNAC	6 cut(s)	1371, 1395, 1703, 1734, 1777, 1893
Hpy188I	TCNGA	9 cut(s)	12, 938, 1164, 1315, 1335, 1448, 1695, 1833, 1948
Hpy8I	GTNNAC	6 cut(s)	1371, 1395, 1703, 1734, 1777, 1893
HpyAV	CCTTC	7 cut(s)	49, 673, 763, 1012, 1544, 1828, 1915
HpyCH4III	ACNGT	5 cut(s)	571, 1309, 1444, 1480, 1927
HpyCH4IV	ACGT	2 cut(s)	83, 1736
HpyF10VI	GCNNNNNNNGC	2 cut(s)	141, 882
HpySE526I	ACGT	2 cut(s)	83, 1736
KflI	GGGWCCC	1 cut(s)	1587
Kzo9I	GATC	4 cut(s)	61, 90, 982, 2022
LguI	GCTCTTC	1 cut(s)	285
LmnI	GCTCC	4 cut(s)	97, 151, 1448, 1837
Lsp1109I	GCAGC	5 cut(s)	168, 253, 964, 1012, 2021
LweI	GCATC	5 cut(s)	55, 721, 1212, 1309, 1711
MaeI	CTAG	5 cut(s)	132, 735, 800, 956, 2035
MaeII	ACGT	2 cut(s)	83, 1736
MaeIII	GTNAC	3 cut(s)	217, 958, 1574
MalI	GATC	4 cut(s)	63, 92, 984, 2024
MboI	GATC	4 cut(s)	61, 90, 982, 2022
MfeI	CAATTG	2 cut(s)	258, 2013
MflI	RGATCY	2 cut(s)	90, 982
MhlI	GDGCHC	5 cut(s)	10, 156, 818, 1453, 1631
MlyI	GAGTC	4 cut(s)	641, 659, 723, 1952
MmeI	TCCRAC	3 cut(s)	447, 1362, 1426
Mph1103I	ATGCAT	1 cut(s)	1428
MslI	CAYNNNNRTG	2 cut(s)	350, 1400
MspA1I	CMGCKG	3 cut(s)	614, 627, 1634
MspI	CCGG	4 cut(s)	301, 1120, 1600, 1729
MspR9I	CCNGG	5 cut(s)	95, 1010, 1120, 1484, 1612
MunI	CAATTG	2 cut(s)	258, 2013
Mva1269I	GAATGC	2 cut(s)	169, 1120
MvaI	CCWGG	4 cut(s)	95, 1010, 1484, 1612
MwoI	GCNNNNNNNGC	2 cut(s)	141, 882
NciI	CCSGG	1 cut(s)	1120
NdeI	CATATG	1 cut(s)	807
NdeII	GATC	4 cut(s)	61, 90, 982, 2022
NheI	GCTAGC	1 cut(s)	131
NlaIV	GGNNCC	6 cut(s)	984, 1124, 1588, 1589, 1790, 1839
NmeAIII	GCCGAG	1 cut(s)	1025
NmuCI	GTSAC	1 cut(s)	217
NsiI	ATGCAT	1 cut(s)	1428
NspI	RCATGY	1 cut(s)	104
PaeI	GCATGC	1 cut(s)	104
PagI	TCATGA	5 cut(s)	109, 400, 921, 1218, 1240
PceI	AGGCCT	1 cut(s)	38
PciSI	GCTCTTC	1 cut(s)	285
PctI	GAATGC	2 cut(s)	169, 1120
PfeI	GAWTC	1 cut(s)	106
PflFI	GACNNNGTC	1 cut(s)	1214
PflMI	CCANNNNNTGG	1 cut(s)	727
PfoI	TCCNGGA	2 cut(s)	93, 1008
PinAI	ACCGGT	1 cut(s)	1728
PkrI	GCNGC	5 cut(s)	183, 268, 954, 1002, 2011
PleI	GAGTC	4 cut(s)	640, 658, 722, 1951
PpsI	GAGTC	4 cut(s)	640, 658, 722, 1951
PpuMI	RGGWCCY	2 cut(s)	1486, 1587
PshBI	ATTAAT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	542
Psp124BI	GAGCTC	3 cut(s)	156, 818, 1453
Psp5II	RGGWCCY	2 cut(s)	1486, 1587
Psp6I	CCWGG	4 cut(s)	93, 1008, 1482, 1610
PspGI	CCWGG	4 cut(s)	93, 1008, 1482, 1610
PspN4I	GGNNCC	6 cut(s)	984, 1124, 1588, 1589, 1790, 1839
PspPI	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
PspPPI	RGGWCCY	2 cut(s)	1486, 1587
PsuI	RGATCY	2 cut(s)	90, 982
PsyI	GACNNNGTC	1 cut(s)	1214
PvuII	CAGCTG	2 cut(s)	614, 1634
RsaI	GTAC	6 cut(s)	71, 356, 912, 1206, 1704, 1924
RsaNI	GTAC	6 cut(s)	70, 355, 911, 1205, 1703, 1923
RseI	CAYNNNNRTG	2 cut(s)	350, 1400
SacI	GAGCTC	3 cut(s)	156, 818, 1453
SapI	GCTCTTC	1 cut(s)	285
SatI	GCNGC	5 cut(s)	182, 267, 953, 1001, 2010
Sau3AI	GATC	4 cut(s)	61, 90, 982, 2022
Sau96I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
SchI	GAGTC	4 cut(s)	641, 659, 723, 1952
ScrFI	CCNGG	5 cut(s)	95, 1010, 1120, 1484, 1612
SduI	GDGCHC	5 cut(s)	10, 156, 818, 1453, 1631
SfaNI	GCATC	5 cut(s)	55, 721, 1212, 1309, 1711
SfcI	CTRYAG	3 cut(s)	157, 987, 1758
SinI	GGWCC	3 cut(s)	1122, 1486, 1587
SmiMI	CAYNNNNRTG	2 cut(s)	350, 1400
SmlI	CTYRAG	2 cut(s)	479, 602
SmoI	CTYRAG	2 cut(s)	479, 602
SpeI	ACTAGT	1 cut(s)	799
SphI	GCATGC	1 cut(s)	104
SseBI	AGGCCT	1 cut(s)	38
SsiI	CCGC	4 cut(s)	135, 625, 927, 1322
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	5 cut(s)	132, 735, 800, 956, 2035
SstI	GAGCTC	3 cut(s)	156, 818, 1453
StuI	AGGCCT	1 cut(s)	38
StyD4I	CCNGG	5 cut(s)	93, 1008, 1118, 1482, 1610
TaaI	ACNGT	5 cut(s)	571, 1309, 1444, 1480, 1927
TaiI	ACGT	2 cut(s)	86, 1739
TaqI	TCGA	3 cut(s)	147, 340, 2025
TatI	WGTACW	3 cut(s)	354, 1204, 1702
TfiI	GAWTC	1 cut(s)	106
TscAI	CASTG	1 cut(s)	1402
TseFI	GTSAC	1 cut(s)	217
TseI	GCWGC	5 cut(s)	181, 266, 952, 1000, 2009
Tsp45I	GTSAC	1 cut(s)	217
TspGWI	ACGGA	1 cut(s)	1220
TspRI	CASTG	1 cut(s)	1402
Tth111I	GACNNNGTC	1 cut(s)	1214
Van91I	CCANNNNNTGG	1 cut(s)	727
VpaK11BI	GGWCC	3 cut(s)	1122, 1486, 1587
VspI	ATTAAT	1 cut(s)	1107
XapI	RAATTY	5 cut(s)	114, 188, 1084, 1430, 1545
XceI	RCATGY	1 cut(s)	104
XspI	CTAG	5 cut(s)	132, 735, 800, 956, 2035
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.