Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0003908

Physical Location & Seq

Genomic Coordinates Reverse (-)

84143657 .. 84147999

Gene Structure 4343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG618700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAGTGCTCAGAAGAAGAGGAACTTCCAAATTGAGGCGTTTAAGCATCGGGTCGTGGTTGATCCGAAATACGCAGAGAAGACTTGGACGATCCTGGAGCATGCCATCAGAGAAATCTATAATCACAATGCTAGCGGGCTCAGTTTTGAAGAGCTTTATAGGAATGCTTACAATATGGTGCTGCACAAATTTGGAGAGAAACTGTACTCTGGTCTGGTGAGAACCATGACTTATCATCTGATGGAAATATCCAAATCGATTGAAGCTGCTCAGGGAGAGCTGTTTCTGGAAGAGCTTAACAGAAAATGGGCAGAGCATAACAAGGCGTTGCAGATGATTCGAGACATATTGATGTACATGGACAGAACTTTTATTCCAAGCACCCACAAAACCCCTGTTCATGAGCTTGGTCTGAACCTTTGGAGGGATGTCGTCATTCACTCCAGCAAAACCCAGTCTAGGCTTTTGGACACGCTTCTTGAGCTTGTGCTTCGAGAAAGAAATGGTGACGTAATCAACAGAGGCTTGATGCGGAATATTATAAAAATGTTAATGGATTTAGGTTCTTATGTTTACCAAGAAGACTTTGAGAAGCATTTTCTTGAAGTTTCAGCTGATTTTTACCGCTGTGAGTCTCAAGAGTTCATCGAGTCATGTGATTGTGGAAACTATTTAAAGAAGGCCGAAAGGCGGCTAAATGAGGAGATGGAGAGAGTGTCCCATTACTTAGATGCTAAAAGTGAAGCTAAGATTACCAGTGTGGTGGAAAAGGAGATGATTGAAAGTCACATGAACAGGCTAGTTCATATGGAAAGCTCGGGTTTAGTTAATATGCTTGTAGATGACAAATATGAAGACTTGGGAAGAATGTACAACTTGTTTCGCAGAGTGCAGAATGGGCTTGTAATTGTAAGAGATGTCATGACTGCTTACATCCGAGATACTGGAAAGCATCTAGTTACTGACCCAGAAAGGTTAAGGGATCCTGTAGACTTTGTGCAACGTCTCCTTGATATGAAGGATAAGTACGACAAAATCATCAGTTTGGCATTTAACAATGACAAGACATTCCAGAATGCTTTAAACTCTTCTTTTGAGTACTTCATTAATTTGAATGCCCGGTCCCCTGAATTTATTTCTCTCTTTGTGGATGACAAGCTTCGGAAAGGTCTTAGAGGGGTTAGCGAGGAGGATGTAGAGGTTGTACTGGACAAGGTCATGATGCTTTTCCGTTACCTTCAGGAGAAAGATGTGTTTGAAAAGTATTACAAGCAACACTTGGCAAAGAGGCTTCTTTCAGGCAAAACTGTTTCTGACGATGCAGAAAGAAGTCTGATTGTAAAGCTCAAAACAGAATGTGGATATCAATTTACTTCCAAGTTGGAGGGTATGTTCACTGATATGAAAACCTCTCAAGATACAATGCATGGGTTCTACACTGCAGTTGGTCCTCAGTTAGGTGATAGCCCAACACTAACAGTCCAGGTCCTCACCACAGGTTCATGGCCCACTCAGCCAAGTGTGACATGCAACCTTCCAGCTGAAATTATGTGGGTATGTGAGAAGTTCAAGAGTTATTATCTAGGGACCCATACTGGGCGGAGATTGTCCTGGCAAACTAATATGGGAACAGCTGATTTGAAAACAACTTTTGGAAAGGGCCAGAAGCATGAGCTGAATGTTTCGACGTATCAGATGTGTGTGCTGATGCTATTCAACAATGCTGACCAGTTGACGTATAAGGAAATCGAGCAGGCTACAGATATCCCAGCCACTGAATTGAAGAGGTGCCTGCAGTCTCTGGCCTGTGTTAAGGGGAAGAATGTTCTTCGGAAGGAGCCAATGAGCAAGGACATAGTTGAGGATGATACCTTTTTCTTCAATGACAAGTTCACGAGCAAGTTCTTTAAAGTAAAGATAGGTACCGTGGTTGCACAAAGGGAGTCTGAACCAGAAAACCTAGAAACCCGGCAGAGAGTAGAGGAAGACAGAAAGCCCCAGATTGAAGCAGCAATTGTGAGGATCATGAAGTCAAGGCGGGTACTGGATCACAATAATATAGTTGCTGAGGTCACAAAGCAGCTGCAGGCGCGATTCTTGCCCAATCCTGTAGTAATAAAGAAGCGTATTGAGTCCCTCATCGAGCGAGAGTTTTTGGAGAGGGATAAAACAGATAGAAAATTGTACAGGTACCTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04120 ko04340 ko04341 map04120 map04340 map04341

Pfam Domains

Protein Families

Cullin Cullin_Nedd8

Protein Analysis

733

Amino Acids

85.74

Weight (kDa)

7.9

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cullin	PF00888	29 - 475	9.3e-162	Cullin alpha solenoid domain
Cullin_AB	PF26557	496 - 631	5.1e-51	Cullin alpha+beta domain
Cullin_Nedd8	PF10557	663 - 725	3e-26	Cullin protein neddylation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26830 AT1G69670 AT1G69670
fragaria_vesca	FvH4_4g31500 FvH4_6g48910
malus_domestica	MD09G1049800.v1.1 MD16G1074600.v1.1 MD17G1050100.v1.1
prunus_persica	Prupe.1G272800_v2.0.a1 Prupe.3G269000_v2.0.a1
pyrus_communis	pycom111g04080 pycom16g06460 pycom17g04490 pycom17g04500
rosa_chinensis	RchiOBHm_Chr2g0168721 RchiOBHm_Chr4g0439991
rosa_laevigata	RLG00000006217 RLG00000021804
rosa_multiflora	Rmu_sc0006000.1_g000007 Rmu_sc0034426.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082740 Rroxscaffold_5G00380940
rosa_rugosa	Rorug02G0535000 Rorug04G0323000
rosa_samantha	Rh2AG605700 Rh2BG618700 Rh2CG586800 Rh2DG629200 Rh4AG374100 Rh4BG386400 Rh4CG400900 Rh4DG380700
rosa_wichuraiana	Rw2G050210 Rw4G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	542
Acc65I	GGTACC	2 cut(s)	1922, 2190
AccB1I	GGYRCC	3 cut(s)	1788, 1922, 2190
AccI	GTMKAC	1 cut(s)	990
AccII	CGCG	1 cut(s)	2092
AciI	CCGC	6 cut(s)	135, 532, 625, 691, 1600, 2038
AclWI	GGATC	6 cut(s)	56, 85, 977, 990, 2030, 2055
AcsI	RAATTY	2 cut(s)	188, 1130
AcuI	CTGAAG	1 cut(s)	1223
AfiI	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 690, 1457, 1596
AjnI	CCWGG	3 cut(s)	93, 1482, 1610
AloI	GAACNNNNNNTCC	4 cut(s)	358, 390, 1376, 1408
Alw21I	GWGCWC	1 cut(s)	10
Alw26I	GTCTC	4 cut(s)	336, 639, 1010, 1803
AlwI	GGATC	6 cut(s)	56, 85, 977, 990, 2030, 2055
AlwNI	CAGNNNCTG	2 cut(s)	1775, 1801
Ama87I	CYCGRG	1 cut(s)	817
AoxI	GGCC	4 cut(s)	681, 1505, 1660, 1803
ApeKI	GCWGC	5 cut(s)	181, 266, 2009, 2080, 2083
ApoI	RAATTY	2 cut(s)	188, 1130
AseI	ATTAAT	1 cut(s)	1107
Asp718I	GGTACC	2 cut(s)	1922, 2190
AspLEI	GCGC	1 cut(s)	2092
AspS9I	GGNCC	6 cut(s)	1122, 1448, 1486, 1506, 1587, 1660
AsuC2I	CCSGG	2 cut(s)	1120, 1969
AsuHPI	GGTGA	4 cut(s)	229, 518, 1472, 1483
AsuNHI	GCTAGC	1 cut(s)	131
AvaI	CYCGRG	1 cut(s)	817
AvaII	GGWCC	4 cut(s)	1122, 1448, 1486, 1587
BaeI	ACNNNNGTAYC	2 cut(s)	1914, 1947
BamHI	GGATCC	1 cut(s)	982
BanI	GGYRCC	3 cut(s)	1788, 1922, 2190
BanII	GRGCYC	1 cut(s)	141
BarI	GAAGNNNNNNTAC	2 cut(s)	1010, 1042
BauI	CACGAG	1 cut(s)	1894
BbsI	GAAGAC	4 cut(s)	86, 588, 861, 1992
Bbv12I	GWGCWC	1 cut(s)	10
BbvCI	CCTCAGC	1 cut(s)	2067
BbvI	GCAGC	5 cut(s)	168, 253, 2021, 2070, 2092
BccI	CCATC	3 cut(s)	113, 235, 700
BcgI	CGANNNNNNTGC	2 cut(s)	320, 354
BciT130I	CCWGG	3 cut(s)	95, 1484, 1612
BcnI	CCSGG	2 cut(s)	1120, 1969
BcoDI	GTCTC	4 cut(s)	336, 639, 1010, 1803
BfaI	CTAG	6 cut(s)	132, 459, 800, 956, 1583, 1961
BfmI	CTRYAG	6 cut(s)	987, 1440, 1758, 1793, 2084, 2109
BisI	GCNGC	6 cut(s)	182, 267, 692, 2010, 2081, 2084
BlsI	GCNGC	6 cut(s)	183, 268, 693, 2011, 2082, 2085
BmcAI	AGTACT	1 cut(s)	1100
Bme1390I	CCNGG	5 cut(s)	95, 1120, 1484, 1612, 1969
Bme18I	GGWCC	4 cut(s)	1122, 1448, 1486, 1587
BmeT110I	CYCGRG	1 cut(s)	817
BmgT120I	GGNCC	6 cut(s)	1122, 1448, 1486, 1506, 1587, 1660
BmiI	GGNNCC	8 cut(s)	984, 1124, 1588, 1589, 1790, 1839, 1924, 2192
BmrFI	CCNGG	5 cut(s)	95, 1120, 1484, 1612, 1969
BmrI	ACTGGG	2 cut(s)	448, 1605
BmsI	GCATC	7 cut(s)	55, 519, 721, 961, 1212, 1309, 1698
BmtI	GCTAGC	1 cut(s)	135
BmuI	ACTGGG	2 cut(s)	448, 1605
BpiI	GAAGAC	4 cut(s)	86, 588, 861, 1992
BpmI	CTGGAG	2 cut(s)	116, 427
Bpu10I	CCTNAGC	2 cut(s)	270, 2067
BpuEI	CTTGAG	3 cut(s)	500, 621, 1398
BpuMI	CCSGG	2 cut(s)	1120, 1969
Bsa29I	ATCGAT	1 cut(s)	257
BsaJI	CCNNGG	1 cut(s)	1926
BsaXI	ACNNNNNCTCC	4 cut(s)	701, 731, 1376, 1406
Bsc4I	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 690, 1457, 1596
Bse1I	ACTGG	7 cut(s)	454, 756, 949, 1212, 1600, 1729, 2049
BseBI	CCWGG	3 cut(s)	95, 1484, 1612
BseCI	ATCGAT	1 cut(s)	257
BseDI	CCNNGG	1 cut(s)	1926
BseGI	GGATG	5 cut(s)	433, 933, 1156, 1198, 1870
BseLI	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 690, 1457, 1596
BseMII	CTCAG	6 cut(s)	23, 154, 284, 1466, 1526, 2058
BseNI	ACTGG	7 cut(s)	454, 756, 949, 1212, 1600, 1729, 2049
BseRI	GAGGAG	2 cut(s)	716, 1202
BseXI	GCAGC	5 cut(s)	168, 253, 2021, 2070, 2092
BseYI	CCCAGC	1 cut(s)	1768
BsgI	GTGCAG	2 cut(s)	167, 911
Bsh1236I	CGCG	1 cut(s)	2092
BshFI	GGCC	4 cut(s)	683, 1507, 1662, 1805
BshNI	GGYRCC	3 cut(s)	1788, 1922, 2190
BshVI	ATCGAT	1 cut(s)	257
BsiHKAI	GWGCWC	1 cut(s)	10
BsiHKCI	CYCGRG	1 cut(s)	817
BsiSI	CCGG	2 cut(s)	1120, 1969
BslFI	GGGAC	4 cut(s)	703, 1108, 1600, 2119
BslI	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 690, 1457, 1596
BsmAI	GTCTC	4 cut(s)	336, 639, 1010, 1803
BsmBI	CGTCTC	1 cut(s)	1010
BsmFI	GGGAC	4 cut(s)	703, 1108, 1600, 2119
BsmI	GAATGC	3 cut(s)	169, 1081, 1120
BsnI	GGCC	4 cut(s)	683, 1507, 1662, 1805
BsoBI	CYCGRG	1 cut(s)	817
Bsp1286I	GDGCHC	2 cut(s)	10, 141
Bsp1407I	TGTACA	3 cut(s)	354, 870, 2184
Bsp143I	GATC	5 cut(s)	61, 90, 982, 2022, 2047
BspACI	CCGC	6 cut(s)	135, 532, 625, 691, 1600, 2038
BspANI	GGCC	4 cut(s)	683, 1507, 1662, 1805
BspCNI	CTCAG	6 cut(s)	22, 153, 283, 1465, 1525, 2059
BspDI	ATCGAT	1 cut(s)	257
BspFNI	CGCG	1 cut(s)	2092
BspHI	TCATGA	4 cut(s)	400, 921, 1218, 2025
BspLI	GGNNCC	8 cut(s)	984, 1124, 1588, 1589, 1790, 1839, 1924, 2192
BspMAI	CTGCAG	3 cut(s)	1444, 1797, 2088
BspOI	GCTAGC	1 cut(s)	135
BspPI	GGATC	6 cut(s)	56, 85, 977, 990, 2030, 2055
BspQI	GCTCTTC	2 cut(s)	144, 285
BspT107I	GGYRCC	3 cut(s)	1788, 1922, 2190
BsrGI	TGTACA	3 cut(s)	354, 870, 2184
BsrI	ACTGG	7 cut(s)	454, 756, 949, 1212, 1600, 1729, 2049
BssECI	CCNNGG	1 cut(s)	1926
BssMI	GATC	5 cut(s)	61, 90, 982, 2022, 2047
BssSI	CACGAG	1 cut(s)	1894
Bst2BI	CACGAG	1 cut(s)	1894
Bst2UI	CCWGG	3 cut(s)	95, 1484, 1612
Bst4CI	ACNGT	4 cut(s)	204, 1309, 1480, 1927
Bst6I	CTCTTC	5 cut(s)	11, 144, 285, 1093, 1778
BstAUI	TGTACA	3 cut(s)	354, 870, 2184
BstC8I	GCNNGC	6 cut(s)	102, 133, 137, 1755, 1793, 2088
BstDEI	CTNAG	9 cut(s)	9, 140, 270, 727, 747, 1172, 1452, 1512, 2067
BstDSI	CCRYGG	1 cut(s)	1926
BstENI	CCTNNNNNAGG	1 cut(s)	1455
BstF5I	GGATG	5 cut(s)	433, 933, 1156, 1198, 1870
BstFNI	CGCG	1 cut(s)	2092
BstHHI	GCGC	1 cut(s)	2092
BstKTI	GATC	5 cut(s)	64, 93, 985, 2025, 2050
BstMAI	GTCTC	4 cut(s)	336, 639, 1010, 1803
BstMBI	GATC	5 cut(s)	61, 90, 982, 2022, 2047
BstMWI	GCNNNNNNNGC	5 cut(s)	481, 898, 1513, 2089, 2098
BstNI	CCWGG	3 cut(s)	95, 1484, 1612
BstNSI	RCATGY	2 cut(s)	104, 1530
BstSCI	CCNGG	5 cut(s)	93, 1118, 1482, 1610, 1967
BstSFI	CTRYAG	6 cut(s)	987, 1440, 1758, 1793, 2084, 2109
BstUI	CGCG	1 cut(s)	2092
BstV1I	GCAGC	5 cut(s)	168, 253, 2021, 2070, 2092
BstV2I	GAAGAC	4 cut(s)	86, 588, 861, 1992
BstX2I	RGATCY	1 cut(s)	982
BstXI	CCANNNNNNTGG	1 cut(s)	763
BstYI	RGATCY	1 cut(s)	982
Bsu15I	ATCGAT	1 cut(s)	257
BsuRI	GGCC	4 cut(s)	683, 1507, 1662, 1805
BsuTUI	ATCGAT	1 cut(s)	257
BtgI	CCRYGG	1 cut(s)	1926
BtsCI	GGATG	5 cut(s)	433, 933, 1156, 1198, 1870
BtsI	GCAGTG	1 cut(s)	1437
BtsIMutI	CAGTG	4 cut(s)	763, 1395, 1437, 1773
Cac8I	GCNNGC	6 cut(s)	102, 133, 137, 1755, 1793, 2088
CaiI	CAGNNNCTG	2 cut(s)	1775, 1801
CciI	TCATGA	4 cut(s)	400, 921, 1218, 2025
CfoI	GCGC	1 cut(s)	2092
Cfr13I	GGNCC	6 cut(s)	1122, 1448, 1486, 1506, 1587, 1660
ClaI	ATCGAT	1 cut(s)	257
DdeI	CTNAG	9 cut(s)	9, 140, 270, 727, 747, 1172, 1452, 1512, 2067
DpnI	GATC	5 cut(s)	63, 92, 984, 2024, 2049
DpnII	GATC	5 cut(s)	61, 90, 982, 2022, 2047
DraI	TTTAAA	3 cut(s)	675, 1083, 1909
Eam1104I	CTCTTC	5 cut(s)	11, 144, 285, 1093, 1778
EarI	CTCTTC	5 cut(s)	11, 144, 285, 1093, 1778
EciI	GGCGGA	1 cut(s)	1615
Eco24I	GRGCYC	1 cut(s)	141
Eco32I	GATATC	2 cut(s)	1364, 1765
Eco47I	GGWCC	4 cut(s)	1122, 1448, 1486, 1587
Eco57I	CTGAAG	1 cut(s)	1223
Eco88I	CYCGRG	1 cut(s)	817
EcoNI	CCTNNNNNAGG	1 cut(s)	1455
EcoO109I	RGGNCCY	2 cut(s)	1486, 1587
EcoRII	CCWGG	3 cut(s)	93, 1482, 1610
EcoRV	GATATC	2 cut(s)	1364, 1765
EcoT22I	ATGCAT	1 cut(s)	1428
EcoT38I	GRGCYC	1 cut(s)	141
Esp3I	CGTCTC	1 cut(s)	1010
FalI	AAGNNNNNCTT	4 cut(s)	8, 40, 1262, 1294
FaqI	GGGAC	4 cut(s)	703, 1108, 1600, 2119
FauI	CCCGC	2 cut(s)	128, 2031
FauNDI	CATATG	1 cut(s)	807
FblI	GTMKAC	1 cut(s)	990
Fnu4HI	GCNGC	6 cut(s)	182, 267, 692, 2010, 2081, 2084
FokI	GGATG	5 cut(s)	440, 920, 1163, 1205, 1877
FriOI	GRGCYC	1 cut(s)	141
Fsp4HI	GCNGC	6 cut(s)	182, 267, 692, 2010, 2081, 2084
FspBI	CTAG	6 cut(s)	132, 459, 800, 956, 1583, 1961
GlaI	GCGC	1 cut(s)	2091
GluI	GCNGC	6 cut(s)	182, 267, 692, 2010, 2081, 2084
GsaI	CCCAGC	1 cut(s)	1772
GsuI	CTGGAG	2 cut(s)	116, 427
HaeIII	GGCC	4 cut(s)	683, 1507, 1662, 1805
HapII	CCGG	2 cut(s)	1120, 1969
HhaI	GCGC	1 cut(s)	2092
Hin6I	GCGC	1 cut(s)	2090
HinP1I	GCGC	1 cut(s)	2090
HincII	GTYRAC	1 cut(s)	1734
HindII	GTYRAC	1 cut(s)	1734
HindIII	AAGCTT	1 cut(s)	1157
HinfI	GANTC	6 cut(s)	337, 632, 650, 1943, 2094, 2132
HpaII	CCGG	2 cut(s)	1120, 1969
HphI	GGTGA	4 cut(s)	229, 518, 1472, 1483
Hpy166II	GTNNAC	5 cut(s)	574, 991, 1395, 1734, 1893
Hpy8I	GTNNAC	5 cut(s)	574, 991, 1395, 1734, 1893
Hpy99I	CGWCG	1 cut(s)	1690
HpyAV	CCTTC	5 cut(s)	673, 1012, 1247, 1544, 1828
HpyCH4III	ACNGT	4 cut(s)	204, 1309, 1480, 1927
HpyCH4IV	ACGT	4 cut(s)	510, 1003, 1688, 1736
HpyF10VI	GCNNNNNNNGC	5 cut(s)	481, 898, 1513, 2089, 2098
HpyF3I	CTNAG	9 cut(s)	9, 140, 270, 727, 747, 1172, 1452, 1512, 2067
HpySE526I	ACGT	4 cut(s)	510, 1003, 1688, 1736
HspAI	GCGC	1 cut(s)	2090
KflI	GGGWCCC	1 cut(s)	1587
KpnI	GGTACC	2 cut(s)	1926, 2194
Kzo9I	GATC	5 cut(s)	61, 90, 982, 2022, 2047
LguI	GCTCTTC	2 cut(s)	144, 285
LmnI	GCTCC	2 cut(s)	97, 1837
Lsp1109I	GCAGC	5 cut(s)	168, 253, 2021, 2070, 2092
LweI	GCATC	7 cut(s)	55, 519, 721, 961, 1212, 1309, 1698
MaeI	CTAG	6 cut(s)	132, 459, 800, 956, 1583, 1961
MaeII	ACGT	4 cut(s)	510, 1003, 1688, 1736
MaeIII	GTNAC	6 cut(s)	506, 785, 958, 1232, 1522, 2071
MalI	GATC	5 cut(s)	63, 92, 984, 2024, 2049
MboI	GATC	5 cut(s)	61, 90, 982, 2022, 2047
MfeI	CAATTG	1 cut(s)	2013
MflI	RGATCY	1 cut(s)	982
MhlI	GDGCHC	2 cut(s)	10, 141
MlyI	GAGTC	4 cut(s)	641, 659, 1952, 2141
MmeI	TCCRAC	1 cut(s)	1362
Mph1103I	ATGCAT	1 cut(s)	1428
MslI	CAYNNNNRTG	2 cut(s)	350, 1400
MspA1I	CMGCKG	5 cut(s)	614, 627, 1541, 1634, 2083
MspI	CCGG	2 cut(s)	1120, 1969
MspR9I	CCNGG	5 cut(s)	95, 1120, 1484, 1612, 1969
MunI	CAATTG	1 cut(s)	2013
Mva1269I	GAATGC	3 cut(s)	169, 1081, 1120
MvaI	CCWGG	3 cut(s)	95, 1484, 1612
MvnI	CGCG	1 cut(s)	2092
MwoI	GCNNNNNNNGC	5 cut(s)	481, 898, 1513, 2089, 2098
NciI	CCSGG	2 cut(s)	1120, 1969
NdeI	CATATG	1 cut(s)	807
NdeII	GATC	5 cut(s)	61, 90, 982, 2022, 2047
NheI	GCTAGC	1 cut(s)	131
NlaIV	GGNNCC	8 cut(s)	984, 1124, 1588, 1589, 1790, 1839, 1924, 2192
NmuCI	GTSAC	4 cut(s)	506, 785, 1522, 2071
NsiI	ATGCAT	1 cut(s)	1428
NspI	RCATGY	2 cut(s)	104, 1530
PaeI	GCATGC	1 cut(s)	104
PagI	TCATGA	4 cut(s)	400, 921, 1218, 2025
PciSI	GCTCTTC	2 cut(s)	144, 285
PctI	GAATGC	3 cut(s)	169, 1081, 1120
PfeI	GAWTC	2 cut(s)	337, 2094
PflFI	GACNNNGTC	1 cut(s)	1214
PfoI	TCCNGGA	1 cut(s)	93
PkrI	GCNGC	6 cut(s)	183, 268, 693, 2011, 2082, 2085
PleI	GAGTC	4 cut(s)	640, 658, 1951, 2140
PpsI	GAGTC	4 cut(s)	640, 658, 1951, 2140
PpuMI	RGGWCCY	2 cut(s)	1486, 1587
PshBI	ATTAAT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	542
Psp5II	RGGWCCY	2 cut(s)	1486, 1587
Psp6I	CCWGG	3 cut(s)	93, 1482, 1610
PspFI	CCCAGC	1 cut(s)	1768
PspGI	CCWGG	3 cut(s)	93, 1482, 1610
PspN4I	GGNNCC	8 cut(s)	984, 1124, 1588, 1589, 1790, 1839, 1924, 2192
PspPI	GGNCC	6 cut(s)	1122, 1448, 1486, 1506, 1587, 1660
PspPPI	RGGWCCY	2 cut(s)	1486, 1587
PstI	CTGCAG	3 cut(s)	1444, 1797, 2088
PstNI	CAGNNNCTG	2 cut(s)	1775, 1801
PsuI	RGATCY	1 cut(s)	982
PsyI	GACNNNGTC	1 cut(s)	1214
PvuII	CAGCTG	4 cut(s)	614, 1541, 1634, 2083
RseI	CAYNNNNRTG	2 cut(s)	350, 1400
SapI	GCTCTTC	2 cut(s)	144, 285
SatI	GCNGC	6 cut(s)	182, 267, 692, 2010, 2081, 2084
Sau3AI	GATC	5 cut(s)	61, 90, 982, 2022, 2047
Sau96I	GGNCC	6 cut(s)	1122, 1448, 1486, 1506, 1587, 1660
ScaI	AGTACT	1 cut(s)	1100
SchI	GAGTC	4 cut(s)	641, 659, 1952, 2141
ScrFI	CCNGG	5 cut(s)	95, 1120, 1484, 1612, 1969
SduI	GDGCHC	2 cut(s)	10, 141
SfaNI	GCATC	7 cut(s)	55, 519, 721, 961, 1212, 1309, 1698
SfcI	CTRYAG	6 cut(s)	987, 1440, 1758, 1793, 2084, 2109
SinI	GGWCC	4 cut(s)	1122, 1448, 1486, 1587
SmiMI	CAYNNNNRTG	2 cut(s)	350, 1400
SmlI	CTYRAG	3 cut(s)	479, 636, 1413
SmoI	CTYRAG	3 cut(s)	479, 636, 1413
SphI	GCATGC	1 cut(s)	104
SsiI	CCGC	6 cut(s)	135, 532, 625, 691, 1600, 2038
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	6 cut(s)	132, 459, 800, 956, 1583, 1961
StyD4I	CCNGG	5 cut(s)	93, 1118, 1482, 1610, 1967
TaaI	ACNGT	4 cut(s)	204, 1309, 1480, 1927
TaiI	ACGT	4 cut(s)	513, 1006, 1691, 1739
TaqI	TCGA	7 cut(s)	257, 340, 493, 648, 1685, 1749, 2142
TatI	WGTACW	6 cut(s)	204, 354, 870, 1098, 1204, 2184
TauI	GCSGC	1 cut(s)	694
TfiI	GAWTC	2 cut(s)	337, 2094
TscAI	CASTG	4 cut(s)	763, 1402, 1444, 1780
TseFI	GTSAC	4 cut(s)	506, 785, 1522, 2071
TseI	GCWGC	5 cut(s)	181, 266, 2009, 2080, 2083
Tsp45I	GTSAC	4 cut(s)	506, 785, 1522, 2071
TspGWI	ACGGA	1 cut(s)	1220
TspRI	CASTG	4 cut(s)	763, 1402, 1444, 1780
Tth111I	GACNNNGTC	1 cut(s)	1214
VpaK11BI	GGWCC	4 cut(s)	1122, 1448, 1486, 1587
VspI	ATTAAT	1 cut(s)	1107
XagI	CCTNNNNNAGG	1 cut(s)	1455
XapI	RAATTY	2 cut(s)	188, 1130
XceI	RCATGY	2 cut(s)	104, 1530
XmiI	GTMKAC	1 cut(s)	990
XspI	CTAG	6 cut(s)	132, 459, 800, 956, 1583, 1961
ZrmI	AGTACT	1 cut(s)	1100
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.