Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0003908

Physical Location & Seq

Genomic Coordinates Forward (+)

3710469 .. 3714925

Gene Structure 4457 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1050100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAGTGGTCAGAAGAAGAGGAACTTCCAAATTGAAGCCTTCAAACATCGGGTCGTGGTTGATCCGAAGTACGCTGAGAAGACGTGGAAGATCCTGGAGCATGCGATTCATGAAATTTACAATCACAACGCTAGCGGTCTCAGCTTCGAGGAGCTCTACAGGAATGCTTACAATATGGTTCTGCACAAATTTGGAGAGAAACTCTACTCCGGTTTGGTGACAACCATGACTCATCATCTAAAAGAAATATCTAAGTCAATTGAAGCTGCTCAGGGAGAGTTGTTTCTGGAAGAGCTGAACCGGAAATGGGCAGAGCATAACAAAGCTTTGCAGATGATCCGAGACATATTGATGTACATGGATAGGACCTTCATCCCAAGCACCCACAAAACCCCTGTTCATGAGCTTGGGTTGAACCTGTGGAGGGATGTTGTTATCCATGCTAGCAAAACCCGGTCTAGGCTTTTGGATACACTTCTTGAGCTTGTGCACAGAGAAAGGAGTGGGGAAGTAATTAACAGAGGCTTGATGAGGAATATTATAAAAATGTTAATGGATTTAGGTTCTACTGTTTACCAAGATGACTTTGAGAAGCATTTTCTTGATGTTTCAGCTGATTTTTACCGCTGTGAGTCTCAAGAGTTCATAGAGTCATGCGATTGTGGGAACTATTTAAAGAAGGCTGAGAGACGCTTAACGGAAGAGATGGAGAGAGTGTCCCATTATTTGGATGCTAGAAGTGAAGCGAAGATAACTAATGTGGTGGAGAAGGAGATGATTGAAAGTCACATTAACAGACTAGTTCATATGGAGAGCTCAGGTTTAGTTAATATGTTTGTGGATGACAAATATGACGACTTGGGAAGAATGTATAGCTTGTTCCGCAGGGTGCAGAATGGACTTGTAATAGTACGAGATGTCATGACTGCTTACATCCGAGATACTGGTAAGCAGCTAATTACTGACCCAGAAAGGTTAAGGGATCCTGTAGATTTTGTGCAGCGTCTCCTGGATTTGAAGGATAAATATGACAAAGTTATCAGCTTGGCATTTAACAATGACAAAACATTCCAAAATGCTCTAAATTCCTCTTTTGAATACTTCATTAATTTGAATGCCCGGTCCCCTGAATTCATTTCTCTGTTTGTGGATGACAAGCTTCGGAAAGGACTTAGAGGGGTTAGTGAGGAGGATGTAGAGGTTGTACTGGACAAGGTCATGATGCTTTTCCGTTATCTTCAAGAGAAAGATGTCTTTGAAAAGTATTACAAGCAACACTTGGCAAAGAGGCTTCTTTCTGGGAAGACTGTTTCTGATGACGCCGAAAGAAGTCTGATTGTGAAGCTCAAAACAGAGTGCGGATATCAGTTTACTTCTAAATTGGAGGGTATGTTTACTGATATGAAGACCTCTCAGGATACGATGCATGGATTCTACTCAACTGTGGGACCTCTGTTAGGCGATAGCCCAATGCTAACTGTCCAGGTCCTCACCACAGGTTCATGGCCTACTCAACCAAGTGCCACCTGCAACCTTCCAGCAGAAATTTTGTGGGTATGTGAGAAGTTCAAGAGTTACTATCTTGGGACCCATACTGGCCGGAGATTGTCGTGGCAAACTAATATGGGCACAGCTGATTTGAAAGCGACTTTTGGAAAGGGCCAGAAGCATGAGCTGAATGTTTCCACATATCAGATGTGTGTACTGATGCTATTTAACAACACTGACCGGTTGACGTATAAGGAAATTGAGCAGGCCGCAGAGATACCAGCCATTGACTTGAAGAGGTGCCTGCAATCTCTGGCCTGTGTTAAGGGGAAGAATGTTCTTCGGAAGGAGCCAATGAGCAAGGACATAGCTGAGGAGGATGCCTTCTTCTTTAATGACAAGTTCACAAGCAAGTTCATCAAGGTAAAGATCGGTACTGTGGTTGCGCAAAGGGAGTCTGAACCAGAAAATCTAGAAACCCGACAGAGAGTAGAGGAAGACAGGAAGCCCCAGATTGAGGCAGCAATTGTGAGGATCATGAAGTCAAGGCGGGTCCTGGATCACAATAACATTGTTGCCGAGGTGACGAAACAGCTGCAGGGGCGATTCTTGCCCAACCCTGTTGTAATAAAGAAACGAATCGAGTCCCTCATTGAGCGGGAGTTTTTGGAGAGGGATAAAACAGATAGAAAATTGTACAGGTACCTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04120 ko04340 ko04341 map04120 map04340 map04341

Pfam Domains

Protein Families

Cullin Cullin_Nedd8

Protein Analysis

734

Amino Acids

85.48

Weight (kDa)

8.3

Isoelectric Point (pI)

45.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cullin	PF00888	29 - 475	8.3e-163	Cullin alpha solenoid domain
Cullin_AB	PF26557	496 - 631	1.3e-49	Cullin alpha+beta domain
Cullin_Nedd8	PF10557	663 - 725	2.3e-26	Cullin protein neddylation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26830 AT1G69670 AT1G69670
fragaria_vesca	FvH4_4g31500 FvH4_6g48910
malus_domestica	MD09G1049800.v1.1 MD16G1074600.v1.1 MD17G1050100.v1.1
prunus_persica	Prupe.1G272800_v2.0.a1 Prupe.3G269000_v2.0.a1
pyrus_communis	pycom111g04080 pycom16g06460 pycom17g04490 pycom17g04500
rosa_chinensis	RchiOBHm_Chr2g0168721 RchiOBHm_Chr4g0439991
rosa_laevigata	RLG00000006217 RLG00000021804
rosa_multiflora	Rmu_sc0006000.1_g000007 Rmu_sc0034426.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082740 Rroxscaffold_5G00380940
rosa_rugosa	Rorug02G0535000 Rorug04G0323000
rosa_samantha	Rh2AG605700 Rh2BG618700 Rh2CG586800 Rh2DG629200 Rh4AG374100 Rh4BG386400 Rh4CG400900 Rh4DG380700
rosa_wichuraiana	Rw2G050210 Rw4G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	542
AarI	CACCTGC	1 cut(s)	1535
Acc16I	TGCGCA	1 cut(s)	1935
Acc36I	ACCTGC	1 cut(s)	1535
Acc65I	GGTACC	1 cut(s)	2190
AccB1I	GGYRCC	2 cut(s)	1788, 2190
AccB7I	CCANNNNNTGG	1 cut(s)	727
AccBSI	CCGCTC	1 cut(s)	2146
AciI	CCGC	7 cut(s)	135, 625, 883, 1359, 1758, 2038, 2146
AclWI	GGATC	7 cut(s)	56, 85, 331, 977, 990, 2030, 2055
AcoI	YGGCCR	1 cut(s)	1597
AcsI	RAATTY	5 cut(s)	114, 188, 1084, 1130, 1545
AcyI	GRCGYC	1 cut(s)	1320
AfaI	GTAC	8 cut(s)	71, 356, 912, 1206, 1704, 1924, 2186, 2192
AfiI	CCNNNNNNNGG	6 cut(s)	307, 424, 459, 727, 1457, 2005
AgeI	ACCGGT	1 cut(s)	1728
AhlI	ACTAGT	1 cut(s)	799
AjiI	CACGTC	1 cut(s)	84
AjnI	CCWGG	4 cut(s)	93, 1008, 1482, 2043
Alw21I	GWGCWC	3 cut(s)	156, 492, 818
Alw26I	GTCTC	5 cut(s)	143, 336, 639, 682, 1010
Alw44I	GTGCAC	1 cut(s)	488
AlwI	GGATC	7 cut(s)	56, 85, 331, 977, 990, 2030, 2055
AoxI	GGCC	5 cut(s)	1505, 1597, 1660, 1755, 1803
ApaLI	GTGCAC	1 cut(s)	488
ApeKI	GCWGC	5 cut(s)	266, 952, 1000, 2009, 2083
ApoI	RAATTY	5 cut(s)	114, 188, 1084, 1130, 1545
ArsI	GACNNNNNNTTYG	2 cut(s)	36, 68
AseI	ATTAAT	1 cut(s)	1107
AsiGI	ACCGGT	1 cut(s)	1728
Asp718I	GGTACC	1 cut(s)	2190
AspLEI	GCGC	1 cut(s)	1936
AspS9I	GGNCC	7 cut(s)	366, 1122, 1448, 1486, 1587, 1660, 2041
AsuC2I	CCSGG	2 cut(s)	454, 1120
AsuHPI	GGTGA	3 cut(s)	229, 1483, 2083
AsuNHI	GCTAGC	2 cut(s)	131, 443
AvaII	GGWCC	6 cut(s)	366, 1122, 1448, 1486, 1587, 2041
BaeGI	GKGCMC	2 cut(s)	492, 1631
BaeI	ACNNNNGTAYC	2 cut(s)	1914, 1947
BamHI	GGATCC	1 cut(s)	982
BanI	GGYRCC	2 cut(s)	1788, 2190
BanII	GRGCYC	2 cut(s)	156, 818
BbsI	GAAGAC	4 cut(s)	86, 1310, 1412, 1992
Bbv12I	GWGCWC	3 cut(s)	156, 492, 818
BbvCI	CCTCAGC	1 cut(s)	1860
BbvI	GCAGC	5 cut(s)	253, 964, 1012, 2021, 2070
BccI	CCATC	1 cut(s)	700
BcgI	CGANNNNNNTGC	2 cut(s)	2065, 2099
BciT130I	CCWGG	4 cut(s)	95, 1010, 1484, 2045
BciVI	GTATCC	2 cut(s)	463, 1411
BcnI	CCSGG	2 cut(s)	454, 1120
BcoDI	GTCTC	5 cut(s)	143, 336, 639, 682, 1010
BcuI	ACTAGT	1 cut(s)	799
BfaI	CTAG	6 cut(s)	132, 444, 459, 735, 800, 1961
BfmI	CTRYAG	3 cut(s)	157, 987, 2084
BfuAI	ACCTGC	1 cut(s)	1535
BfuI	GTATCC	2 cut(s)	463, 1411
BisI	GCNGC	6 cut(s)	267, 953, 1001, 1758, 2010, 2084
BlsI	GCNGC	6 cut(s)	268, 954, 1002, 1759, 2011, 2085
Bme1390I	CCNGG	6 cut(s)	95, 454, 1010, 1120, 1484, 2045
Bme18I	GGWCC	6 cut(s)	366, 1122, 1448, 1486, 1587, 2041
BmgBI	CACGTC	1 cut(s)	84
BmgT120I	GGNCC	7 cut(s)	366, 1122, 1448, 1486, 1587, 1660, 2041
BmiI	GGNNCC	9 cut(s)	984, 1124, 1449, 1588, 1589, 1790, 1839, 2042, 2192
BmrFI	CCNGG	6 cut(s)	95, 454, 1010, 1120, 1484, 2045
BmsI	GCATC	5 cut(s)	721, 1212, 1413, 1698, 1858
BmtI	GCTAGC	2 cut(s)	135, 447
BpiI	GAAGAC	4 cut(s)	86, 1310, 1412, 1992
BplI	GAGNNNNNCTC	2 cut(s)	186, 218
BpmI	CTGGAG	1 cut(s)	116
Bpu10I	CCTNAGC	3 cut(s)	270, 817, 1860
BpuEI	CTTGAG	2 cut(s)	500, 621
BpuMI	CCSGG	2 cut(s)	454, 1120
BsaHI	GRCGYC	1 cut(s)	1320
BsaI	GGTCTC	1 cut(s)	143
BsaJI	CCNNGG	1 cut(s)	2067
BsaWI	WCCGGW	3 cut(s)	209, 300, 1728
BsaXI	ACNNNNNCTCC	4 cut(s)	701, 731, 1376, 1406
Bsc4I	CCNNNNNNNGG	6 cut(s)	307, 424, 459, 727, 1457, 2005
Bse118I	RCCGGY	1 cut(s)	1728
Bse1I	ACTGG	3 cut(s)	949, 1212, 1600
BseBI	CCWGG	4 cut(s)	95, 1010, 1484, 2045
BseDI	CCNNGG	1 cut(s)	2067
BseGI	GGATG	8 cut(s)	372, 433, 736, 847, 933, 1156, 1198, 1873
BseLI	CCNNNNNNNGG	6 cut(s)	307, 424, 459, 727, 1457, 2005
BseMII	CTCAG	7 cut(s)	66, 154, 284, 675, 831, 1427, 1851
BseNI	ACTGG	3 cut(s)	949, 1212, 1600
BseRI	GAGGAG	3 cut(s)	164, 1202, 1877
BseSI	GKGCMC	2 cut(s)	492, 1631
BseXI	GCAGC	5 cut(s)	253, 964, 1012, 2021, 2070
BsgI	GTGCAG	3 cut(s)	167, 911, 1019
BshFI	GGCC	5 cut(s)	1507, 1599, 1662, 1757, 1805
BshNI	GGYRCC	2 cut(s)	1788, 2190
BshTI	ACCGGT	1 cut(s)	1728
BsiHKAI	GWGCWC	3 cut(s)	156, 492, 818
BsiSI	CCGG	6 cut(s)	210, 301, 454, 1120, 1600, 1729
BslFI	GGGAC	5 cut(s)	703, 1108, 1461, 1600, 2119
BslI	CCNNNNNNNGG	6 cut(s)	307, 424, 459, 727, 1457, 2005
BsmAI	GTCTC	5 cut(s)	143, 336, 639, 682, 1010
BsmBI	CGTCTC	2 cut(s)	682, 1010
BsmFI	GGGAC	5 cut(s)	703, 1108, 1461, 1600, 2119
BsmI	GAATGC	2 cut(s)	169, 1120
BsnI	GGCC	5 cut(s)	1507, 1599, 1662, 1757, 1805
Bso31I	GGTCTC	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	156, 492, 818, 1631
Bsp1407I	TGTACA	2 cut(s)	354, 2184
Bsp143I	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
BspACI	CCGC	7 cut(s)	135, 625, 883, 1359, 1758, 2038, 2146
BspANI	GGCC	5 cut(s)	1507, 1599, 1662, 1757, 1805
BspCNI	CTCAG	7 cut(s)	67, 153, 283, 676, 830, 1426, 1852
BspHI	TCATGA	5 cut(s)	109, 400, 921, 1218, 2025
BspLI	GGNNCC	9 cut(s)	984, 1124, 1449, 1588, 1589, 1790, 1839, 2042, 2192
BspMAI	CTGCAG	1 cut(s)	2088
BspMI	ACCTGC	1 cut(s)	1535
BspOI	GCTAGC	2 cut(s)	135, 447
BspPI	GGATC	7 cut(s)	56, 85, 331, 977, 990, 2030, 2055
BspQI	GCTCTTC	1 cut(s)	285
BspT107I	GGYRCC	2 cut(s)	1788, 2190
BspTNI	GGTCTC	1 cut(s)	143
BsrBI	CCGCTC	1 cut(s)	2146
BsrFI	RCCGGY	1 cut(s)	1728
BsrGI	TGTACA	2 cut(s)	354, 2184
BsrI	ACTGG	3 cut(s)	949, 1212, 1600
BssAI	RCCGGY	1 cut(s)	1728
BssECI	CCNNGG	1 cut(s)	2067
BssMI	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
BssNI	GRCGYC	1 cut(s)	1320
Bst2UI	CCWGG	4 cut(s)	95, 1010, 1484, 2045
Bst4CI	ACNGT	5 cut(s)	571, 1309, 1444, 1480, 1927
Bst6I	CTCTTC	4 cut(s)	11, 285, 696, 1778
BstACI	GRCGYC	1 cut(s)	1320
BstAUI	TGTACA	2 cut(s)	354, 2184
BstC8I	GCNNGC	5 cut(s)	102, 133, 445, 1755, 1793
BstDEI	CTNAG	9 cut(s)	75, 140, 252, 270, 684, 817, 1172, 1413, 1860
BstENI	CCTNNNNNAGG	1 cut(s)	1455
BstF5I	GGATG	8 cut(s)	372, 433, 736, 847, 933, 1156, 1198, 1873
BstHHI	GCGC	1 cut(s)	1936
BstKTI	GATC	7 cut(s)	64, 93, 339, 985, 1920, 2025, 2050
BstMAI	GTCTC	5 cut(s)	143, 336, 639, 682, 1010
BstMBI	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
BstMWI	GCNNNNNNNGC	4 cut(s)	141, 882, 2089, 2098
BstNI	CCWGG	4 cut(s)	95, 1010, 1484, 2045
BstNSI	RCATGY	1 cut(s)	104
BstSCI	CCNGG	6 cut(s)	93, 452, 1008, 1118, 1482, 2043
BstSFI	CTRYAG	3 cut(s)	157, 987, 2084
BstSLI	GKGCMC	2 cut(s)	492, 1631
BstV1I	GCAGC	5 cut(s)	253, 964, 1012, 2021, 2070
BstV2I	GAAGAC	4 cut(s)	86, 1310, 1412, 1992
BstX2I	RGATCY	2 cut(s)	90, 982
BstYI	RGATCY	2 cut(s)	90, 982
BsuI	GTATCC	2 cut(s)	463, 1411
BsuRI	GGCC	5 cut(s)	1507, 1599, 1662, 1757, 1805
BtrI	CACGTC	1 cut(s)	84
BtsCI	GGATG	8 cut(s)	372, 433, 736, 847, 933, 1156, 1198, 1873
BtsIMutI	CAGTG	1 cut(s)	1722
BveI	ACCTGC	1 cut(s)	1535
Cac8I	GCNNGC	5 cut(s)	102, 133, 445, 1755, 1793
CciI	TCATGA	5 cut(s)	109, 400, 921, 1218, 2025
CfoI	GCGC	1 cut(s)	1936
Cfr10I	RCCGGY	1 cut(s)	1728
Cfr13I	GGNCC	7 cut(s)	366, 1122, 1448, 1486, 1587, 1660, 2041
CseI	GACGC	3 cut(s)	699, 992, 1328
Csp6I	GTAC	8 cut(s)	70, 355, 911, 1205, 1703, 1923, 2185, 2191
CspAI	ACCGGT	1 cut(s)	1728
CviQI	GTAC	8 cut(s)	70, 355, 911, 1205, 1703, 1923, 2185, 2191
DdeI	CTNAG	9 cut(s)	75, 140, 252, 270, 684, 817, 1172, 1413, 1860
DpnI	GATC	7 cut(s)	63, 92, 338, 984, 1919, 2024, 2049
DpnII	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
DraI	TTTAAA	1 cut(s)	675
EaeI	YGGCCR	1 cut(s)	1597
Eam1104I	CTCTTC	4 cut(s)	11, 285, 696, 1778
EarI	CTCTTC	4 cut(s)	11, 285, 696, 1778
Ecl136II	GAGCTC	2 cut(s)	154, 816
Eco24I	GRGCYC	2 cut(s)	156, 818
Eco31I	GGTCTC	1 cut(s)	143
Eco32I	GATATC	1 cut(s)	1364
Eco47I	GGWCC	6 cut(s)	366, 1122, 1448, 1486, 1587, 2041
Eco53kI	GAGCTC	2 cut(s)	154, 816
EcoICRI	GAGCTC	2 cut(s)	154, 816
EcoNI	CCTNNNNNAGG	1 cut(s)	1455
EcoO109I	RGGNCCY	5 cut(s)	366, 1448, 1486, 1587, 2041
EcoRI	GAATTC	1 cut(s)	1130
EcoRII	CCWGG	4 cut(s)	93, 1008, 1482, 2043
EcoRV	GATATC	1 cut(s)	1364
EcoT22I	ATGCAT	1 cut(s)	1428
EcoT38I	GRGCYC	2 cut(s)	156, 818
Esp3I	CGTCTC	2 cut(s)	682, 1010
FalI	AAGNNNNNCTT	4 cut(s)	8, 40, 1262, 1294
FaqI	GGGAC	5 cut(s)	703, 1108, 1461, 1600, 2119
FauI	CCCGC	2 cut(s)	2031, 2139
FauNDI	CATATG	1 cut(s)	807
Fnu4HI	GCNGC	6 cut(s)	267, 953, 1001, 1758, 2010, 2084
FokI	GGATG	8 cut(s)	359, 440, 743, 854, 920, 1163, 1205, 1880
FriOI	GRGCYC	2 cut(s)	156, 818
Fsp4HI	GCNGC	6 cut(s)	267, 953, 1001, 1758, 2010, 2084
FspBI	CTAG	6 cut(s)	132, 444, 459, 735, 800, 1961
FspI	TGCGCA	1 cut(s)	1935
GlaI	GCGC	1 cut(s)	1935
GluI	GCNGC	6 cut(s)	267, 953, 1001, 1758, 2010, 2084
GsuI	CTGGAG	1 cut(s)	116
HaeIII	GGCC	5 cut(s)	1507, 1599, 1662, 1757, 1805
HapII	CCGG	6 cut(s)	210, 301, 454, 1120, 1600, 1729
HgaI	GACGC	3 cut(s)	699, 992, 1328
HhaI	GCGC	1 cut(s)	1936
Hin1I	GRCGYC	1 cut(s)	1320
Hin6I	GCGC	1 cut(s)	1934
HinP1I	GCGC	1 cut(s)	1934
HincII	GTYRAC	1 cut(s)	1734
HindII	GTYRAC	1 cut(s)	1734
HindIII	AAGCTT	2 cut(s)	324, 1157
HinfI	GANTC	9 cut(s)	106, 229, 632, 650, 1431, 1943, 2094, 2127, 2132
HpaII	CCGG	6 cut(s)	210, 301, 454, 1120, 1600, 1729
HphI	GGTGA	3 cut(s)	229, 1483, 2083
Hpy166II	GTNNAC	7 cut(s)	490, 574, 1371, 1395, 1703, 1734, 1893
Hpy8I	GTNNAC	7 cut(s)	490, 574, 1371, 1395, 1703, 1734, 1893
HpyAV	CCTTC	8 cut(s)	49, 379, 673, 763, 1012, 1544, 1828, 1882
HpyCH4III	ACNGT	5 cut(s)	571, 1309, 1444, 1480, 1927
HpyCH4IV	ACGT	2 cut(s)	83, 1736
HpyCH4V	TGCA	9 cut(s)	184, 331, 490, 892, 1000, 1426, 1530, 1795, 2086
HpyF10VI	GCNNNNNNNGC	4 cut(s)	141, 882, 2089, 2098
HpyF3I	CTNAG	9 cut(s)	75, 140, 252, 270, 684, 817, 1172, 1413, 1860
HpySE526I	ACGT	2 cut(s)	83, 1736
Hsp92I	GRCGYC	1 cut(s)	1320
HspAI	GCGC	1 cut(s)	1934
KflI	GGGWCCC	1 cut(s)	1587
KpnI	GGTACC	1 cut(s)	2194
Kzo9I	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
LguI	GCTCTTC	1 cut(s)	285
LmnI	GCTCC	3 cut(s)	97, 151, 1837
Lsp1109I	GCAGC	5 cut(s)	253, 964, 1012, 2021, 2070
LweI	GCATC	5 cut(s)	721, 1212, 1413, 1698, 1858
MaeI	CTAG	6 cut(s)	132, 444, 459, 735, 800, 1961
MaeII	ACGT	2 cut(s)	83, 1736
MaeIII	GTNAC	4 cut(s)	217, 785, 1574, 2071
MalI	GATC	7 cut(s)	63, 92, 338, 984, 1919, 2024, 2049
MbiI	CCGCTC	1 cut(s)	2146
MboI	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
MfeI	CAATTG	2 cut(s)	258, 2013
MflI	RGATCY	2 cut(s)	90, 982
MhlI	GDGCHC	4 cut(s)	156, 492, 818, 1631
MlyI	GAGTC	5 cut(s)	223, 641, 659, 1952, 2141
Mph1103I	ATGCAT	1 cut(s)	1428
MslI	CAYNNNNRTG	1 cut(s)	350
MspA1I	CMGCKG	4 cut(s)	614, 627, 1634, 2083
MspI	CCGG	6 cut(s)	210, 301, 454, 1120, 1600, 1729
MspR9I	CCNGG	6 cut(s)	95, 454, 1010, 1120, 1484, 2045
MunI	CAATTG	2 cut(s)	258, 2013
Mva1269I	GAATGC	2 cut(s)	169, 1120
MvaI	CCWGG	4 cut(s)	95, 1010, 1484, 2045
MwoI	GCNNNNNNNGC	4 cut(s)	141, 882, 2089, 2098
NciI	CCSGG	2 cut(s)	454, 1120
NdeI	CATATG	1 cut(s)	807
NdeII	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
NheI	GCTAGC	2 cut(s)	131, 443
NlaIV	GGNNCC	9 cut(s)	984, 1124, 1449, 1588, 1589, 1790, 1839, 2042, 2192
NmeAIII	GCCGAG	1 cut(s)	2092
NmuCI	GTSAC	3 cut(s)	217, 785, 2071
NsbI	TGCGCA	1 cut(s)	1935
NsiI	ATGCAT	1 cut(s)	1428
NspI	RCATGY	1 cut(s)	104
PaeI	GCATGC	1 cut(s)	104
PagI	TCATGA	5 cut(s)	109, 400, 921, 1218, 2025
PaqCI	CACCTGC	1 cut(s)	1535
PciSI	GCTCTTC	1 cut(s)	285
PctI	GAATGC	2 cut(s)	169, 1120
PfeI	GAWTC	4 cut(s)	106, 1431, 2094, 2127
PflFI	GACNNNGTC	1 cut(s)	1214
PflMI	CCANNNNNTGG	1 cut(s)	727
PfoI	TCCNGGA	3 cut(s)	93, 1008, 2043
PinAI	ACCGGT	1 cut(s)	1728
PkrI	GCNGC	6 cut(s)	268, 954, 1002, 1759, 2011, 2085
PleI	GAGTC	5 cut(s)	223, 640, 658, 1951, 2140
PpsI	GAGTC	5 cut(s)	223, 640, 658, 1951, 2140
PpuMI	RGGWCCY	5 cut(s)	366, 1448, 1486, 1587, 2041
PshBI	ATTAAT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	542
Psp124BI	GAGCTC	2 cut(s)	156, 818
Psp5II	RGGWCCY	5 cut(s)	366, 1448, 1486, 1587, 2041
Psp6I	CCWGG	4 cut(s)	93, 1008, 1482, 2043
PspGI	CCWGG	4 cut(s)	93, 1008, 1482, 2043
PspN4I	GGNNCC	9 cut(s)	984, 1124, 1449, 1588, 1589, 1790, 1839, 2042, 2192
PspPI	GGNCC	7 cut(s)	366, 1122, 1448, 1486, 1587, 1660, 2041
PspPPI	RGGWCCY	5 cut(s)	366, 1448, 1486, 1587, 2041
PsrI	GAACNNNNNNTAC	2 cut(s)	863, 895
PstI	CTGCAG	1 cut(s)	2088
PsuI	RGATCY	2 cut(s)	90, 982
PsyI	GACNNNGTC	1 cut(s)	1214
PvuII	CAGCTG	3 cut(s)	614, 1634, 2083
RsaI	GTAC	8 cut(s)	71, 356, 912, 1206, 1704, 1924, 2186, 2192
RsaNI	GTAC	8 cut(s)	70, 355, 911, 1205, 1703, 1923, 2185, 2191
RseI	CAYNNNNRTG	1 cut(s)	350
SacI	GAGCTC	2 cut(s)	156, 818
SapI	GCTCTTC	1 cut(s)	285
SatI	GCNGC	6 cut(s)	267, 953, 1001, 1758, 2010, 2084
Sau3AI	GATC	7 cut(s)	61, 90, 336, 982, 1917, 2022, 2047
Sau96I	GGNCC	7 cut(s)	366, 1122, 1448, 1486, 1587, 1660, 2041
SchI	GAGTC	5 cut(s)	223, 641, 659, 1952, 2141
ScrFI	CCNGG	6 cut(s)	95, 454, 1010, 1120, 1484, 2045
SduI	GDGCHC	4 cut(s)	156, 492, 818, 1631
SfaNI	GCATC	5 cut(s)	721, 1212, 1413, 1698, 1858
SfcI	CTRYAG	3 cut(s)	157, 987, 2084
SinI	GGWCC	6 cut(s)	366, 1122, 1448, 1486, 1587, 2041
SmiMI	CAYNNNNRTG	1 cut(s)	350
SmlI	CTYRAG	2 cut(s)	479, 636
SmoI	CTYRAG	2 cut(s)	479, 636
SpeI	ACTAGT	1 cut(s)	799
SphI	GCATGC	1 cut(s)	104
SsiI	CCGC	7 cut(s)	135, 625, 883, 1359, 1758, 2038, 2146
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	6 cut(s)	132, 444, 459, 735, 800, 1961
SstI	GAGCTC	2 cut(s)	156, 818
StyD4I	CCNGG	6 cut(s)	93, 452, 1008, 1118, 1482, 2043
TaaI	ACNGT	5 cut(s)	571, 1309, 1444, 1480, 1927
TaiI	ACGT	2 cut(s)	86, 1739
TaqI	TCGA	2 cut(s)	147, 2130
TatI	WGTACW	4 cut(s)	354, 1204, 1702, 2184
TauI	GCSGC	1 cut(s)	1760
TfiI	GAWTC	4 cut(s)	106, 1431, 2094, 2127
TscAI	CASTG	1 cut(s)	1729
TseFI	GTSAC	3 cut(s)	217, 785, 2071
TseI	GCWGC	5 cut(s)	266, 952, 1000, 2009, 2083
Tsp45I	GTSAC	3 cut(s)	217, 785, 2071
TspGWI	ACGGA	2 cut(s)	713, 1220
TspRI	CASTG	1 cut(s)	1729
Tth111I	GACNNNGTC	1 cut(s)	1214
Van91I	CCANNNNNTGG	1 cut(s)	727
VneI	GTGCAC	1 cut(s)	488
VpaK11BI	GGWCC	6 cut(s)	366, 1122, 1448, 1486, 1587, 2041
VspI	ATTAAT	1 cut(s)	1107
XagI	CCTNNNNNAGG	1 cut(s)	1455
XapI	RAATTY	5 cut(s)	114, 188, 1084, 1130, 1545
XbaI	TCTAGA	1 cut(s)	1960
XceI	RCATGY	1 cut(s)	104
XspI	CTAG	6 cut(s)	132, 444, 459, 735, 800, 1961
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.