Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0003908

Physical Location & Seq

Genomic Coordinates Reverse (-)

25092779 .. 25096699

Gene Structure 3921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G269000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAGTGCTCAGAAGAAGAGGAACTTCCAAATTGAGGCCTTTAAGCATCGGGTTGTGGTTGATCCCAAATACGCAGAGAAGACCTGGAAGATCCTGGAGCATGCGATTCACGAAATTTACAATCACAATGCTAGCGGGCTTAGCTTCGAAGAGCTTTATAGGAATGCCTACAATATGGTGCTGCACAAATTTGGAGAGAAACTCTACTCTGGTCTGGTGACAACCATGACTTATCATCTAAAAGAAATATCTAAATCAATTGAAGCTGCTCAGGGAGAGTTGTTTTTGGAAGAGCTGAACAGGAAATGGGCAGAACATAACAAGGCATTGCAGATGATTCGAGACATATTGATGTACATGGACAGGACTTTTATCCCAAGCACCCACAAAACCCCTGTTCATGAGCTTGGGTTGAACCTGTGGAGGGATGTTGTAATTCACTCTAGCAAAACCCAGGCTAGGCTTTTGGATACACTTCTTGAGCTTGTGCATAGAGAAAGGAGTGGTGAAGTAATTAACAGAGGCTTGATGAGGAATATTATAAAAATGTTAATGGATTTGGGTTCTTCGGTTTACCAAGACGACTTTGAGAAGCATTTTCTTGAGGTTTCAGCTGATTTTTACCGTTGTGAGTCTCAAGAGTTCATAGAGTCATGTGACTGTGGGAACTATTTAAAGAAGGCTGAGAGACGCTTAATGGAAGAAATGGAGAGAGTGTCCCATTACTTGGATGCTAGAAGTGAAGCTAAGATAACAAATGTGGTGGAAAAGGAGATGATCGAAAGTCACATGAACAGACTAGTTCATATGGAGAGCTCAGGTTTAGTTAATATGCTTGTGGATGACAAATATGATGACTTGGGAAGAATGTATAGCTTGTTTCGCAGGGTGCAGAACGGACTTGTGATAGTCAGAGATGTCATGACTGCTTACATCCGAGATACTGGCAAACAGCTAGTTACTGACCCAGAAAGATTAAGGGATCCTGTAGATTTTGTGCAGCGTCTCTTGGATTTGAAGGACAAATATGACAAAGTTATCAATTTGGCATTTAACAATGACAAGACATTCCAGAATGCTCTAAATTCTTCTTTTGAATACTTCATTAATTTGAATGCCAGGTCCCCTGAATTCATTTCTCTGTTTGTGGATGACAAGCTTCGGAAAGGATTAAGAGGGGTCAGTGAGGAGGATGTAGAAGTTGTACTGGACAAGGTCATGATGCTTTTCCGTTACCTTCAAGAGAAAGATGTGTTTGAAAAGTATTACAAACAACACTTGGCAAAGAGGCTTCTTTCTGGGAAAACTGTTTCTGATGATGCAGAAAGAAGTCTTATTGTTAAGCTCAAAACAGAGTGTGGATATCAATTCACTTCTAAATTGGAGGGTATGTTCACTGATATGAAGACCTCTCAGGATACAATGCATGGATTCTACTCAGCCGTCGGACATCAGTTAGGTGATAGCCCAACACTAGCTGTTCAGGTCCTCACAACAGGTTCCTGGCCTACTCAGCCAAGTGCCACGTGCAACCTTCCAGCAGAAATTTTGTGGGTATGCGAAAAGTTCAAGAGTTATTATCTCGGGACCCATACTGGGCGGAGATTGTCCTGGCAAACAAATATGGGTACAGCTGACTTGAAAACGACTTTTGGAAAGGGCCAGAAGCATGAGCTGAATGTTTCCACATACCAGATGTGCGTGCTGATGCTATTCAACAACACTGACCGGTTGACCTATAAGGAAATTGAGCAGGCTACGGAGATACCAGCCTCTGACTTGAAGAGGTGTCTGCAATCTCTGGCCTGTGTTAAAGGGAAGAATGTTCTTCGGAAGGAGCCAATGAGCAAGGACATAGCTGAGGACGATGCCTTCTTCTTTAATGACAAGTTCACAAGCAAGTTCTTCAAGGTAAAGATAGGTACTGTGGTTGCGCAAAGGGAGTCTGAACCAGAAAATCAAGAAACCAGGCAGAGAGTAGAGGAAGACAGGAAGCCCCAGATTGAGGCAGCAATTGTGAGGATCATGAAGTCAAGGCGCGTACTGGATCACAATAATATCGTTGCTGAGGTCACGAAACAGCTGCAGGCACGATTCCTGCCAAACCCTGTTGTAATAAAGAAACGAATCGAGTCCCTCATTGAGCGGGAGTTTTTGGAGAGGGATAAAACAGATAGAAAATTGTACAGGTACCTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04120 ko04340 ko04341 map04120 map04340 map04341

Pfam Domains

Protein Families

Cullin Cullin_Nedd8

Protein Analysis

734

Amino Acids

85.56

Weight (kDa)

8.13

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003908)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26830 AT1G69670 AT1G69670
fragaria_vesca	FvH4_4g31500 FvH4_6g48910
malus_domestica	MD09G1049800.v1.1 MD16G1074600.v1.1 MD17G1050100.v1.1
prunus_persica	Prupe.1G272800_v2.0.a1 Prupe.3G269000_v2.0.a1
pyrus_communis	pycom111g04080 pycom16g06460 pycom17g04490 pycom17g04500
rosa_chinensis	RchiOBHm_Chr2g0168721 RchiOBHm_Chr4g0439991
rosa_laevigata	RLG00000006217 RLG00000021804
rosa_multiflora	Rmu_sc0006000.1_g000007 Rmu_sc0034426.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082740 Rroxscaffold_5G00380940
rosa_rugosa	Rorug02G0535000 Rorug04G0323000
rosa_samantha	Rh2AG605700 Rh2BG618700 Rh2CG586800 Rh2DG629200 Rh4AG374100 Rh4BG386400 Rh4CG400900 Rh4DG380700
rosa_wichuraiana	Rw2G050210 Rw4G032000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	542
Acc16I	TGCGCA	1 cut(s)	1935
Acc65I	GGTACC	1 cut(s)	2190
AccB1I	GGYRCC	1 cut(s)	2190
AccB7I	CCANNNNNTGG	1 cut(s)	727
AccBSI	CCGCTC	1 cut(s)	2146
AccII	CGCG	1 cut(s)	2040
AciI	CCGC	3 cut(s)	135, 1600, 2146
AclWI	GGATC	6 cut(s)	56, 85, 977, 990, 2030, 2055
AcsI	RAATTY	5 cut(s)	114, 188, 1084, 1130, 1545
AcvI	CACGTG	1 cut(s)	1527
AfaI	GTAC	7 cut(s)	356, 1206, 1630, 1924, 2043, 2186, 2192
AfiI	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 727, 1596, 2005
AgeI	ACCGGT	1 cut(s)	1728
AhlI	ACTAGT	1 cut(s)	799
AjnI	CCWGG	7 cut(s)	83, 93, 453, 1118, 1502, 1610, 1967
AloI	GAACNNNNNNTCC	2 cut(s)	1376, 1408
Alw21I	GWGCWC	2 cut(s)	10, 818
Alw26I	GTCTC	4 cut(s)	336, 639, 682, 1010
AlwI	GGATC	6 cut(s)	56, 85, 977, 990, 2030, 2055
AlwNI	CAGNNNCTG	1 cut(s)	1775
Ama87I	CYCGRG	1 cut(s)	1583
AoxI	GGCC	4 cut(s)	36, 1505, 1660, 1803
ApeKI	GCWGC	5 cut(s)	181, 266, 1000, 2009, 2083
ApoI	RAATTY	5 cut(s)	114, 188, 1084, 1130, 1545
AseI	ATTAAT	1 cut(s)	1107
AsiGI	ACCGGT	1 cut(s)	1728
Asp718I	GGTACC	1 cut(s)	2190
AspLEI	GCGC	2 cut(s)	1936, 2040
AspS9I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
AsuHPI	GGTGA	3 cut(s)	229, 518, 1472
AsuII	TTCGAA	1 cut(s)	147
AsuNHI	GCTAGC	1 cut(s)	131
AvaI	CYCGRG	1 cut(s)	1583
AvaII	GGWCC	3 cut(s)	1122, 1486, 1587
BaeI	ACNNNNGTAYC	2 cut(s)	1914, 1947
BamHI	GGATCC	1 cut(s)	982
BanI	GGYRCC	1 cut(s)	2190
BanII	GRGCYC	1 cut(s)	818
BbrPI	CACGTG	1 cut(s)	1527
BbsI	GAAGAC	3 cut(s)	86, 1412, 1992
Bbv12I	GWGCWC	2 cut(s)	10, 818
BbvCI	CCTCAGC	2 cut(s)	1860, 2067
BbvI	GCAGC	5 cut(s)	168, 253, 1012, 2021, 2070
BceAI	ACGGC	1 cut(s)	1427
BcgI	CGANNNNNNTGC	4 cut(s)	320, 354, 2065, 2099
BciT130I	CCWGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
BciVI	GTATCC	2 cut(s)	463, 1411
BcoDI	GTCTC	4 cut(s)	336, 639, 682, 1010
BcuI	ACTAGT	1 cut(s)	799
BfaI	CTAG	7 cut(s)	132, 444, 459, 735, 800, 956, 1475
BfmI	CTRYAG	2 cut(s)	987, 2084
BfuI	GTATCC	2 cut(s)	463, 1411
BisI	GCNGC	5 cut(s)	182, 267, 1001, 2010, 2084
BlpI	GCTNAGC	1 cut(s)	140
BlsI	GCNGC	5 cut(s)	183, 268, 1002, 2011, 2085
Bme1390I	CCNGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
Bme18I	GGWCC	3 cut(s)	1122, 1486, 1587
BmeT110I	CYCGRG	1 cut(s)	1583
BmgT120I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
BmiI	GGNNCC	7 cut(s)	984, 1124, 1501, 1588, 1589, 1839, 2192
BmrFI	CCNGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
BmrI	ACTGGG	1 cut(s)	1605
BmsI	GCATC	6 cut(s)	55, 721, 1212, 1309, 1698, 1858
BmtI	GCTAGC	1 cut(s)	135
BmuI	ACTGGG	1 cut(s)	1605
BpiI	GAAGAC	3 cut(s)	86, 1412, 1992
BplI	GAGNNNNNCTC	2 cut(s)	186, 218
BpmI	CTGGAG	1 cut(s)	116
Bpu10I	CCTNAGC	4 cut(s)	270, 817, 1860, 2067
Bpu1102I	GCTNAGC	1 cut(s)	140
Bpu14I	TTCGAA	1 cut(s)	147
BpuEI	CTTGAG	3 cut(s)	500, 621, 623
BsaAI	YACGTR	1 cut(s)	1527
BsaJI	CCNNGG	1 cut(s)	453
BsaWI	WCCGGW	1 cut(s)	1728
BsaXI	ACNNNNNCTCC	4 cut(s)	701, 731, 1376, 1406
Bsc4I	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 727, 1596, 2005
Bse118I	RCCGGY	1 cut(s)	1728
Bse1I	ACTGG	4 cut(s)	949, 1212, 1600, 2049
Bse3DI	GCAATG	1 cut(s)	326
BseBI	CCWGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
BseDI	CCNNGG	1 cut(s)	453
BseGI	GGATG	6 cut(s)	433, 736, 847, 933, 1156, 1198
BseLI	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 727, 1596, 2005
BseMI	GCAATG	1 cut(s)	326
BseMII	CTCAG	9 cut(s)	23, 284, 675, 831, 1427, 1452, 1526, 1851, 2058
BseNI	ACTGG	4 cut(s)	949, 1212, 1600, 2049
BseRI	GAGGAG	1 cut(s)	1202
BseXI	GCAGC	5 cut(s)	168, 253, 1012, 2021, 2070
BsgI	GTGCAG	3 cut(s)	167, 911, 1019
Bsh1236I	CGCG	1 cut(s)	2040
BshFI	GGCC	4 cut(s)	38, 1507, 1662, 1805
BshNI	GGYRCC	1 cut(s)	2190
BshTI	ACCGGT	1 cut(s)	1728
BsiHKAI	GWGCWC	2 cut(s)	10, 818
BsiHKCI	CYCGRG	1 cut(s)	1583
BsiSI	CCGG	1 cut(s)	1729
BslFI	GGGAC	4 cut(s)	703, 1108, 1600, 2119
BslI	CCNNNNNNNGG	6 cut(s)	34, 424, 459, 727, 1596, 2005
BsmAI	GTCTC	4 cut(s)	336, 639, 682, 1010
BsmBI	CGTCTC	2 cut(s)	682, 1010
BsmFI	GGGAC	4 cut(s)	703, 1108, 1600, 2119
BsmI	GAATGC	3 cut(s)	169, 1081, 1120
BsnI	GGCC	4 cut(s)	38, 1507, 1662, 1805
BsoBI	CYCGRG	1 cut(s)	1583
Bsp119I	TTCGAA	1 cut(s)	147
Bsp1286I	GDGCHC	2 cut(s)	10, 818
Bsp1407I	TGTACA	2 cut(s)	354, 2184
Bsp143I	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
Bsp1720I	GCTNAGC	1 cut(s)	140
BspACI	CCGC	3 cut(s)	135, 1600, 2146
BspANI	GGCC	4 cut(s)	38, 1507, 1662, 1805
BspCNI	CTCAG	9 cut(s)	22, 283, 676, 830, 1426, 1451, 1525, 1852, 2059
BspFNI	CGCG	1 cut(s)	2040
BspHI	TCATGA	4 cut(s)	400, 921, 1218, 2025
BspLI	GGNNCC	7 cut(s)	984, 1124, 1501, 1588, 1589, 1839, 2192
BspMAI	CTGCAG	1 cut(s)	2088
BspOI	GCTAGC	1 cut(s)	135
BspPI	GGATC	6 cut(s)	56, 85, 977, 990, 2030, 2055
BspQI	GCTCTTC	2 cut(s)	144, 285
BspT104I	TTCGAA	1 cut(s)	147
BspT107I	GGYRCC	1 cut(s)	2190
BsrBI	CCGCTC	1 cut(s)	2146
BsrDI	GCAATG	1 cut(s)	326
BsrFI	RCCGGY	1 cut(s)	1728
BsrGI	TGTACA	2 cut(s)	354, 2184
BsrI	ACTGG	4 cut(s)	949, 1212, 1600, 2049
BssAI	RCCGGY	1 cut(s)	1728
BssECI	CCNNGG	1 cut(s)	453
BssMI	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
Bst2UI	CCWGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
Bst4CI	ACNGT	4 cut(s)	626, 662, 1309, 1927
Bst6I	CTCTTC	4 cut(s)	11, 144, 285, 1778
BstAUI	TGTACA	2 cut(s)	354, 2184
BstBAI	YACGTR	1 cut(s)	1527
BstBI	TTCGAA	1 cut(s)	147
BstC8I	GCNNGC	6 cut(s)	102, 133, 137, 1703, 1755, 2088
BstF5I	GGATG	6 cut(s)	433, 736, 847, 933, 1156, 1198
BstFNI	CGCG	1 cut(s)	2040
BstHHI	GCGC	2 cut(s)	1936, 2040
BstKTI	GATC	6 cut(s)	64, 93, 780, 985, 2025, 2050
BstMAI	GTCTC	4 cut(s)	336, 639, 682, 1010
BstMBI	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
BstMWI	GCNNNNNNNGC	3 cut(s)	141, 882, 1513
BstNI	CCWGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
BstNSI	RCATGY	1 cut(s)	104
BstSCI	CCNGG	7 cut(s)	83, 93, 453, 1118, 1502, 1610, 1967
BstSFI	CTRYAG	2 cut(s)	987, 2084
BstUI	CGCG	1 cut(s)	2040
BstV1I	GCAGC	5 cut(s)	168, 253, 1012, 2021, 2070
BstV2I	GAAGAC	3 cut(s)	86, 1412, 1992
BstX2I	RGATCY	2 cut(s)	90, 982
BstYI	RGATCY	2 cut(s)	90, 982
BsuI	GTATCC	2 cut(s)	463, 1411
BsuRI	GGCC	4 cut(s)	38, 1507, 1662, 1805
BtsCI	GGATG	6 cut(s)	433, 736, 847, 933, 1156, 1198
BtsIMutI	CAGTG	3 cut(s)	1189, 1395, 1722
Cac8I	GCNNGC	6 cut(s)	102, 133, 137, 1703, 1755, 2088
CaiI	CAGNNNCTG	1 cut(s)	1775
CciI	TCATGA	4 cut(s)	400, 921, 1218, 2025
CfoI	GCGC	2 cut(s)	1936, 2040
Cfr10I	RCCGGY	1 cut(s)	1728
Cfr13I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
CseI	GACGC	2 cut(s)	699, 992
Csp6I	GTAC	7 cut(s)	355, 1205, 1629, 1923, 2042, 2185, 2191
CspAI	ACCGGT	1 cut(s)	1728
CspCI	CAANNNNNGTGG	2 cut(s)	744, 779
CviQI	GTAC	7 cut(s)	355, 1205, 1629, 1923, 2042, 2185, 2191
DpnI	GATC	6 cut(s)	63, 92, 779, 984, 2024, 2049
DpnII	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
DraI	TTTAAA	1 cut(s)	675
Eam1104I	CTCTTC	4 cut(s)	11, 144, 285, 1778
EarI	CTCTTC	4 cut(s)	11, 144, 285, 1778
EciI	GGCGGA	1 cut(s)	1615
Ecl136II	GAGCTC	1 cut(s)	816
Eco147I	AGGCCT	1 cut(s)	38
Eco24I	GRGCYC	1 cut(s)	818
Eco32I	GATATC	1 cut(s)	1364
Eco47I	GGWCC	3 cut(s)	1122, 1486, 1587
Eco53kI	GAGCTC	1 cut(s)	816
Eco72I	CACGTG	1 cut(s)	1527
Eco88I	CYCGRG	1 cut(s)	1583
EcoICRI	GAGCTC	1 cut(s)	816
EcoO109I	RGGNCCY	3 cut(s)	1122, 1486, 1587
EcoRI	GAATTC	1 cut(s)	1130
EcoRII	CCWGG	7 cut(s)	83, 93, 453, 1118, 1502, 1610, 1967
EcoRV	GATATC	1 cut(s)	1364
EcoT22I	ATGCAT	1 cut(s)	1428
EcoT38I	GRGCYC	1 cut(s)	818
Esp3I	CGTCTC	2 cut(s)	682, 1010
FalI	AAGNNNNNCTT	2 cut(s)	8, 40
FaqI	GGGAC	4 cut(s)	703, 1108, 1600, 2119
FauI	CCCGC	2 cut(s)	128, 2139
FauNDI	CATATG	1 cut(s)	807
Fnu4HI	GCNGC	5 cut(s)	182, 267, 1001, 2010, 2084
FokI	GGATG	6 cut(s)	440, 743, 854, 920, 1163, 1205
FriOI	GRGCYC	1 cut(s)	818
Fsp4HI	GCNGC	5 cut(s)	182, 267, 1001, 2010, 2084
FspBI	CTAG	7 cut(s)	132, 444, 459, 735, 800, 956, 1475
FspI	TGCGCA	1 cut(s)	1935
GlaI	GCGC	2 cut(s)	1935, 2039
GluI	GCNGC	5 cut(s)	182, 267, 1001, 2010, 2084
GsuI	CTGGAG	1 cut(s)	116
HaeIII	GGCC	4 cut(s)	38, 1507, 1662, 1805
HapII	CCGG	1 cut(s)	1729
HgaI	GACGC	2 cut(s)	699, 992
HhaI	GCGC	2 cut(s)	1936, 2040
Hin6I	GCGC	2 cut(s)	1934, 2038
HinP1I	GCGC	2 cut(s)	1934, 2038
HincII	GTYRAC	1 cut(s)	1734
HindII	GTYRAC	1 cut(s)	1734
HindIII	AAGCTT	1 cut(s)	1157
HinfI	GANTC	9 cut(s)	106, 337, 632, 650, 1431, 1943, 2094, 2127, 2132
HpaII	CCGG	1 cut(s)	1729
HphI	GGTGA	3 cut(s)	229, 518, 1472
Hpy166II	GTNNAC	4 cut(s)	574, 1395, 1734, 1893
Hpy188I	TCNGA	9 cut(s)	12, 914, 938, 1164, 1315, 1448, 1777, 1833, 1948
Hpy8I	GTNNAC	4 cut(s)	574, 1395, 1734, 1893
Hpy99I	CGWCG	1 cut(s)	1448
HpyAV	CCTTC	6 cut(s)	673, 1012, 1247, 1544, 1828, 1882
HpyCH4III	ACNGT	4 cut(s)	626, 662, 1309, 1927
HpyCH4IV	ACGT	1 cut(s)	1526
HpyF10VI	GCNNNNNNNGC	3 cut(s)	141, 882, 1513
HpySE526I	ACGT	1 cut(s)	1526
HspAI	GCGC	2 cut(s)	1934, 2038
KflI	GGGWCCC	1 cut(s)	1587
KpnI	GGTACC	1 cut(s)	2194
Kzo9I	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
LguI	GCTCTTC	2 cut(s)	144, 285
LmnI	GCTCC	2 cut(s)	97, 1837
Lsp1109I	GCAGC	5 cut(s)	168, 253, 1012, 2021, 2070
LweI	GCATC	6 cut(s)	55, 721, 1212, 1309, 1698, 1858
MaeI	CTAG	7 cut(s)	132, 444, 459, 735, 800, 956, 1475
MaeII	ACGT	1 cut(s)	1526
MaeIII	GTNAC	6 cut(s)	217, 656, 785, 958, 1232, 2071
MalI	GATC	6 cut(s)	63, 92, 779, 984, 2024, 2049
MbiI	CCGCTC	1 cut(s)	2146
MboI	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
MfeI	CAATTG	2 cut(s)	258, 2013
MflI	RGATCY	2 cut(s)	90, 982
MhlI	GDGCHC	2 cut(s)	10, 818
MlyI	GAGTC	4 cut(s)	641, 659, 1952, 2141
MmeI	TCCRAC	1 cut(s)	1426
Mph1103I	ATGCAT	1 cut(s)	1428
MslI	CAYNNNNRTG	2 cut(s)	350, 1400
MspA1I	CMGCKG	3 cut(s)	614, 1634, 2083
MspI	CCGG	1 cut(s)	1729
MspR9I	CCNGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
MunI	CAATTG	2 cut(s)	258, 2013
Mva1269I	GAATGC	3 cut(s)	169, 1081, 1120
MvaI	CCWGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
MvnI	CGCG	1 cut(s)	2040
MwoI	GCNNNNNNNGC	3 cut(s)	141, 882, 1513
NdeI	CATATG	1 cut(s)	807
NdeII	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
NheI	GCTAGC	1 cut(s)	131
NlaIV	GGNNCC	7 cut(s)	984, 1124, 1501, 1588, 1589, 1839, 2192
NmuCI	GTSAC	4 cut(s)	217, 656, 785, 2071
NsbI	TGCGCA	1 cut(s)	1935
NsiI	ATGCAT	1 cut(s)	1428
NspI	RCATGY	1 cut(s)	104
NspV	TTCGAA	1 cut(s)	147
PaeI	GCATGC	1 cut(s)	104
PagI	TCATGA	4 cut(s)	400, 921, 1218, 2025
PceI	AGGCCT	1 cut(s)	38
PciSI	GCTCTTC	2 cut(s)	144, 285
PctI	GAATGC	3 cut(s)	169, 1081, 1120
PfeI	GAWTC	5 cut(s)	106, 337, 1431, 2094, 2127
PflFI	GACNNNGTC	1 cut(s)	1214
PflMI	CCANNNNNTGG	1 cut(s)	727
PfoI	TCCNGGA	1 cut(s)	93
PinAI	ACCGGT	1 cut(s)	1728
PkrI	GCNGC	5 cut(s)	183, 268, 1002, 2011, 2085
PleI	GAGTC	4 cut(s)	640, 658, 1951, 2140
PmaCI	CACGTG	1 cut(s)	1527
PmlI	CACGTG	1 cut(s)	1527
PpsI	GAGTC	4 cut(s)	640, 658, 1951, 2140
Ppu21I	YACGTR	1 cut(s)	1527
PpuMI	RGGWCCY	3 cut(s)	1122, 1486, 1587
PshBI	ATTAAT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	542
Psp124BI	GAGCTC	1 cut(s)	818
Psp5II	RGGWCCY	3 cut(s)	1122, 1486, 1587
Psp6I	CCWGG	7 cut(s)	83, 93, 453, 1118, 1502, 1610, 1967
PspCI	CACGTG	1 cut(s)	1527
PspGI	CCWGG	7 cut(s)	83, 93, 453, 1118, 1502, 1610, 1967
PspN4I	GGNNCC	7 cut(s)	984, 1124, 1501, 1588, 1589, 1839, 2192
PspPI	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
PspPPI	RGGWCCY	3 cut(s)	1122, 1486, 1587
PstI	CTGCAG	1 cut(s)	2088
PstNI	CAGNNNCTG	1 cut(s)	1775
PsuI	RGATCY	2 cut(s)	90, 982
PsyI	GACNNNGTC	1 cut(s)	1214
PvuII	CAGCTG	3 cut(s)	614, 1634, 2083
RsaI	GTAC	7 cut(s)	356, 1206, 1630, 1924, 2043, 2186, 2192
RsaNI	GTAC	7 cut(s)	355, 1205, 1629, 1923, 2042, 2185, 2191
RseI	CAYNNNNRTG	2 cut(s)	350, 1400
SacI	GAGCTC	1 cut(s)	818
SapI	GCTCTTC	2 cut(s)	144, 285
SatI	GCNGC	5 cut(s)	182, 267, 1001, 2010, 2084
Sau3AI	GATC	6 cut(s)	61, 90, 777, 982, 2022, 2047
Sau96I	GGNCC	4 cut(s)	1122, 1486, 1587, 1660
SchI	GAGTC	4 cut(s)	641, 659, 1952, 2141
ScrFI	CCNGG	7 cut(s)	85, 95, 455, 1120, 1504, 1612, 1969
SduI	GDGCHC	2 cut(s)	10, 818
SfaNI	GCATC	6 cut(s)	55, 721, 1212, 1309, 1698, 1858
SfcI	CTRYAG	2 cut(s)	987, 2084
SfuI	TTCGAA	1 cut(s)	147
SinI	GGWCC	3 cut(s)	1122, 1486, 1587
SmiMI	CAYNNNNRTG	2 cut(s)	350, 1400
SmlI	CTYRAG	3 cut(s)	479, 602, 636
SmoI	CTYRAG	3 cut(s)	479, 602, 636
SpeI	ACTAGT	1 cut(s)	799
SphI	GCATGC	1 cut(s)	104
SseBI	AGGCCT	1 cut(s)	38
SsiI	CCGC	3 cut(s)	135, 1600, 2146
SspI	AATATT	1 cut(s)	538
SspMI	CTAG	7 cut(s)	132, 444, 459, 735, 800, 956, 1475
SstI	GAGCTC	1 cut(s)	818
StuI	AGGCCT	1 cut(s)	38
StyD4I	CCNGG	7 cut(s)	83, 93, 453, 1118, 1502, 1610, 1967
TaaI	ACNGT	4 cut(s)	626, 662, 1309, 1927
TaiI	ACGT	1 cut(s)	1529
TaqI	TCGA	4 cut(s)	147, 340, 780, 2130
TatI	WGTACW	3 cut(s)	354, 1204, 2184
TfiI	GAWTC	5 cut(s)	106, 337, 1431, 2094, 2127
TscAI	CASTG	3 cut(s)	1189, 1402, 1729
TseFI	GTSAC	4 cut(s)	217, 656, 785, 2071
TseI	GCWGC	5 cut(s)	181, 266, 1000, 2009, 2083
Tsp45I	GTSAC	4 cut(s)	217, 656, 785, 2071
TspDTI	ATGAA	8 cut(s)	389, 634, 794, 806, 1093, 1123, 1418, 2042
TspGWI	ACGGA	3 cut(s)	912, 1220, 1775
TspRI	CASTG	3 cut(s)	1189, 1402, 1729
Tth111I	GACNNNGTC	1 cut(s)	1214
Van91I	CCANNNNNTGG	1 cut(s)	727
VpaK11BI	GGWCC	3 cut(s)	1122, 1486, 1587
VspI	ATTAAT	1 cut(s)	1107
XapI	RAATTY	5 cut(s)	114, 188, 1084, 1130, 1545
XceI	RCATGY	1 cut(s)	104
XspI	CTAG	7 cut(s)	132, 444, 459, 735, 800, 956, 1475
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.