AT1G70320

Ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007872
Physical Location & Seq
Reverse (-)
26488454 .. 26501652
13199 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70320.1

Sequence Viewer

Length: 10977 bp
ATGAAGCTTCGAAGGAGAAGAGCTTCGGAAGTGCCTACCAAAATCAGTTTGTTCATCAATAGTGTTACTTCTGTTCCACTTGAGCTAATACAAGAACCCCTTGCAAGCTTTCGCTGGGAATTCGACAAGGGTGACTTCCATCATTGGGTGGACCTCTTCTATCATTTTGACACTTTTTTTGAGAAGCACGTAAAAGTAAGGAAGGATCTGCGTATTGAGGAAGAATTTGATGAATCTGATCCACCTTTCCCAAAGGATGCTGTTCTTCAAGTTCTCAGAGTTATCAGACTTGTTTTGGAGAACTGCACTAACAAACAGTTTTACACTTCTTATGAGCAGCATCTTTCTCTCCTACTTGCATCTACTGATGCAGATGTTGTTGAAGCCTGTCTGCAGACGTTAGCTGCCTTTTTGAAAAGGCCAACTGGAAAATACTCCATAAGAGATGCTTCTCTGAATCTAAAACTATTTTCCCTTGCACAAGGCTGGGGGGGAAAAGAGGAAGGCCTTGGCTTGACGTCATGTGCCACAGAACACAGTTGTGATCAGCTTTTTCTCCAGCTAGGGTGTACTCTTCTTTTTGAGTTTTATGCTTCTGATGAATCACCAAGTGAGCTTCCTGGCGGTTTACAAGTTATTCATGTACCTGATGTCAGCATGCGGTCAGAGTCTGACCTGGAACTCCTGAACAAATTAGTCATTGATCACAATGTTCCTCCCAGTTTAAGATTTGCGTTGCTGACCAGATTGAGATTTGCAAGGGCGTTCTCGTCTTTGGCAACCCGGCAACAGTATACATGCATTCGCTTATATGCTTTCATTGTTTTGGTTCAAGCAAGTGGTGACACTGAGAATGTTGTTTCTTTCTTTAATGGCGAACCGGAATTTGTAAATGAGTTAGTTACGCTGGTAAGCTATGAGGATACTGTGCCAGCGAAAATAAGGATACTATGCTTGCAATCCTTGGTTGCACTATCGCAGGATCGAACTCGGCAGCCGACTGTTTTAACTGCAGTCACCTCCGGCGGGCATCGTGGTTTGCTATCTGGCTTAATGCAGAAAGCAATTGATTCTGTTATTTGTAATACTTCCAAGTGGTCTCTTGCTTTTGCAGAAGCCTTGTTATCCCTTGTTACAGTCCTGGTTTCATCATCGTCTGGATGTTCAGCCATGCGAGAAGCTGGTCTTATTCCGACCCTAGTGCCTCTCATCAAAGATACAGATCCCCAGCACTTGCATTTGGTCAGTACTGCTGTGCATATATTAGAAGTCTTCATGGATTACAGCAATCCAGCTGCTGCTTTGTTCAGAGATTTGGGTGGCTTAGATGATACTATCTTTCGGTTAAAACAGGAAGTCTCTCGAACTGAAGACGATGTGAAAGAAATTGTTTGCTGTTCTGGTAGTAATGGGCCTGAAGACGATACTGAACAACTTCCCTATTCTGAAGCATTAATTTCGTATCACAGGAGATTGTTGTTAAAAGCGTTGTTACGTGCAATATCCCTTGGAACTTATGCTCCTGGTAACACTAACCTCTACGGTTCCGAGGAGAGCTTGTTGCCTGAATGCTTATGCATTATCTTCCGGAGGGCAAAAGATTTTGGGGGTGGAGTATTCTCGCTTGCTGCCACTGTCATGAGTGATCTCATTCATAAAGATCCCACTTGTTTCAATGCTTTAGATTCAGCTGGTTTAACTTCTGCCTTTCTTGATGCTATATCTGATGAGGTCATATGCTCTGCAGAAGCTATAACATGCATTCCGCAGTGTCTGGATGCTCTGTGTCTCAACAATAGCGGTCTTCAAGCTGTGAAGGACCGAAATGCCTTGAGGTGTTTTGTGAAAATATTTAGTTCTCCCTCTTATCTGAAGGCTCTTACTAGTGATACACCTGGTTCTCTGTCAAGTGGGCTTGATGAACTCTTGAGACATCAATCTTCGTTGCGCACTTATGGAGTTGATATGTTCATTGAAATCCTTAATTCCATCTTGATTATTGGATCTGGGATGGAGGCCACCACCTCTAAGTCAGCGGATGTGCCTACTGATGCTGCTCCTGTTCCTATGGAAATTGACGTTGATGAGAAGAGCTTGGCAGTTTCGGATGAGGCGGAACCATCTTCTGACACTTCTCCAGCAAACATTGAGCTATTTCTGCCAGATTGTGTGTGTAATGTTGCTCGTCTCTTTGAAACAGTTCTTCAGAATGCGGAAGTATGTTCCCTGTTTGTTGAGAAGAAAGGAATTGATACTGTTTTGCAGCTATTCTCTTTACCTCTTATGCCTCTATCAACCTCTCTTGGTCAAAGTTTTTCTGTCGCTTTTAAGAACTTCTCCCCTCAGCATTCAGCTGGTCTTGCCCGAATATTGTGCTCCTACTTAAGAGAACATCTGAAGAAGACAAACAACCTTTTGGTTTCCATTGAAGGTACTCAGCTTCTTAAATTAGAGTCTGCGGTCCAGACAAAGATTTTGAGATCTCTTTCTTGCCTAGAAGGCATGTTGTCCCTCTCCAACTTTTTGTTGAAAGGATCAGCTTCAGTTATCTCAGAATTGAGTGCTGCTAATGCTGATGTACTGAAAGAACTTGGTATAACATACAAGCAAACGATTTGGCAGATGGCCTTGTGTAATGATACTAAGGAAGATGAAAAAAAGAGTGTTGATCGAGCATCTGATAATTCAGTTTCAGCATCATCCAGTACTGCTGAAAGAGAGAGTGATGAGGATTCAAGCAATGCTTTAGCAGTTAGATACACAAACCCTGTATCCATTAGAAGCAGTAGCTCTCAGTCTATTTGGGGTGGGCATCGCGAATTTCTGTCTGTTGTGCGTTCTGGCAGAGGTGTTCATGGTCATACCCGCCACGCAATAGCCCGAATGAGGGGTGGGAGAACTCGTCGGCACCTGGAGTCTTTTAATTTTGATTCTGAAATTCCAGCGGATCTGCCAGTAACCTCATCTTCCCATGAGCTGAAAAAGAAAAGCACCGAAGTTCTTATTGCTGAAATTTTAAACAAGCTGAATTGTACACTACGTTTTTTTTTCACATCCCTTGTGAAAGGATTTACCTCTGCTAATCGTCGCAGGATTGATGGGCCATCATTGAGTTCAGCATCTAAGACTCTTGGTACTGCCCTAGCTAAAGTATTTCTTGAAGCTCTTAACTTCCAGGGGTACGGTGCTGCTGCTGGGCCTGATACATCTCTGTCACTGAAGTGCCGGTACCTTGGAAAAGTGGTAGATGACATAACTTTCCTGACATTTGATACTCGAAGGAGGGTCTGTTTTACAGCTATGGTGAATAGTTTTTATGTCCATGGAACATTTAAGGAACTTCTCACCACCTTTGAAGCTACAAGCCAGTTGCTTTGGAAAGTGCCGTTTTCTATTCGTGCATCTAGTACTGAGAATGAGAAGTCAGGTGAGAGAAATTTATGGTCTCACAGTAAGTGGCTGGTAGATACTCTTCAAAACTATTGCCGAGCACTGGACTATTTTGTTAACTCTACGTATCTTTTATCTCCAACCTCTCAAACGCAGCTTCTTGTACAGCCAGCTTCAGTTGATTTGTCGATTGGACTTTTTCCTGTACCAAGGGAACCTGAGACTTTTGTGCGAAATCTGCAGTCTCAGGTTCTGGAAGTCATACTACCTATATGGAACCACCCTATGTTTCCAGATTGCAATCCTAATTTTGTTGCTTCAGTTACCTCCCTTGTTACACATATTTACTCTGGTGTTGTGGATACTAGGGAAAATCGAAGTGGTGCTACTCAGGGTACAAACCAAAGAGCCTTGCCTCTACAGCCTGACGAAGCCATTGTTGGTATGATTGTTGAAATGGGATTTTCAAGGTCAAGGGCTGAAGACGCATTACGAAGAGTGGGAACGAACAGTGTTGAGATGGCTATGGACTGGTTGTTTACCAATCCTGAGGATCCTGTGCAGGAAGATGACGAATTGGCTCAAGCACTTGCACTATCTCTTGGAAATTCATCTGAAACTCCAAAACTTGAGGATACAGAAAAGCCTGTAGATGTTCCGCAGGAAGAAGCAGAACCAAAAGAACCTCCTGTTGATGAAGTCATTGCTGCATCAGTGAAGTTATTTCAGAGTGATGATTCTATTGCTTTCCCGTTAGTGGATTTGTTTGTGACACTATGTAACCGAAACAAAGGGGAAGATCGGCCAAAAATCGTGTTTTATCTTATTCAGCAACTGAAGCTTGTACAACTTGATTTCTCCAAGGATACTGGTGCTTTGACTATGATACCACACATTTTAGCATTAGTACTCTCAGAAGATGATAACACACGAGAAATTGCTGCACAGGATGGTATTGTGGCCGTAGCAATTGGTATCTTGACGGATTTCAACCTTAAGAGTGAATCTGAAACTGACATTCTGGCTCCAAAATGCATTAGTGCTTTGCTTCTTGTATTGAGCATGATGCTGCAGGCACAGACAAGACTCTCGTCTGAATATGTGGAAGGAAATCAAGGTGGATCTTTAGTGCTGAGTGATTCTCCGCAAGACTCAACAGCAGCTTTAAAGGACGCGTTATCTTCAGATGTTGCTAAAGGGGAGTCAAACCAGGCTTTGGAATCGATGTTTGGGAAATCTACAGGCTATCTGACCATGGAAGAGAGTTCTAAAGTTTTACTAATCGCCTGTGGCCTCATAAAGCAGCGTGTTCCAGCTATGATCATGCAGGCTGTGCTTCAGCTATGTGCCCGTCTAACGAAATCACATGCTTTAGCTATCCAGTTTCTGGAAAATGGAGGCTTATCTTCACTTTTTAATCTTCCGAAAAAATGTTTTTTCCCTGGGTATGATACTGTTGCATCTGTTATTGTACGGCATCTTGTTGAAGATCCTCAGACTCTCCAAATTGCTATGGAAACAGAAATACGTCAGACCTTGAGTGGGAAGAGACATATAGGTAGAGTATTACCTCGGACATTCCTGACGACAATGGCACCTGTAATTTCAAGAGATCCGGTTGTTTTTATGAAAGCTGTGGCTTCAACTTGTCAGTTGGAGTCATCAGGAGGTACGGACTTTGTGATACTGACAAAGGAAAAAGAAAAGCCGAAAGTTTCTGGCAGTGAACACGGGTTTTCTTTAAATGAACCCCTTGGAATATCTGAAAATAAGCTTCATGATGGGTCAGGAAAATGTTCAAAAAGCCACAGAAGAGTCCCCACTAACTTCATCCAAGTTATTGATCAGCTTATTGACATTGTCTTGAGTTTTCCTGGGTTGAAGAGGCAGGAAGGTGAAGCAGCCAATTTAATTTCGATGGATGTTGATGAGCCAACTACTAAAGTGAAGGGTAAATCAAAAGTTGGTGAGCCGGAGAAAGCAGAACTTGGGTCTGAAAAATCTGAAGAATTGGCCAGGGTAACTTTTATTTTGAAGTTGTTGAGTGATATTGTTCTCATGTACCTACATGGTACCAGTGTCATACTGAGACGGGATACAGAAATATCTCAACTTCGAGGGTCCAATCTACCTGATGATTCACCTGGAAATGGAGGGTTAATTTACCATGTCATTCATCGATTGCTTCCTATATCTCTCGAAAAGTTTGTTGGACCTGAAGAATGGAAGGAGAAACTGTCTGAAAAGGCGTCCTGGTTTCTGGTTGTTTTGTGCAGTCGTTCCAATGAAGGGCGTAAAAGAATAATCAATGAGCTTACGAGGGTTCTATCCGTATTTGCTTCCTTGGGAAGGAGTTCGAGTCAAAGTGTTCTATTACCTGATAAAAGAGTTCTTGCTTTTGCTAACCTGGTTTATTCGATCTTGACAAAGAATTCATCTTCAAGCAATTTCCCTGGTTGTGGCTGTTCACCTGACGTTGCAAAGAGCATGATAGACGGGGGAACTATCCAGTGTCTGACCAGCATCCTTAACGTGATTGATCTTGACCACCCTGATGCCCCAAAGCTTGTCACTCTTATTCTCAAGTCTCTCGAGACACTGACGAGGGCTGCAAATGCCGCTGAGCAGCTAAAATCAGAAGTACCAAATGAGCAAAAAAATACAGATTCTGATGAGAGACATGATAGTCATGGAACTTCAACTTCAACTGAAGTTGATGAGCTGAATCAAAATAATAGCAGTCTACAGCAAGTAACAGATGCAGTAGATAATGGACAGGAGCAGCCTCAAGTTTCCTCTCAGAGTGAAGGTGAAAGGGGTTCTAGTCTAACCCAGGCTATGCTTCAGGAGATGAGGATAGAGGGCGATGAGACAATACTGCCTGAACCTATTCAGATGGATTTCTTTCGAGAAGAGATTGAAGGTGATCAAATCGAAATGAGTTTTCATGTTGAAGATAGGGCTGACGATGATGTAGATGATGACATGGACGATGAAGGAGAGGATGATGAAGGAGATGATGAAGATGCAGATTCAGTGGAAGATGGAGCTGGTGTTATGTCTATTGCTGGAACTGATGTTGAAGACCCTGAAGATACTGGCCTTGGAGATGAATATAATGATGACATGGTTGATGAAGATGAGGAAGATGAGGATGAATATAATGATGACATGGTTGATGAAGATGAGGATGATGAGGATGAATATAATGATGACATGGTGGATGAAGATGAGGATGATTTCCACGAGACTCGTGTAATAGAAGTGCGGTGGAGGGAAGCTCTTGATGGGCTGGATCACTTCCAGATTGTTGGGCGATCTGGTGGTGGAAATGGTTTTATTGACGATATTACTGCTGAGCCGTTTGAAGGTGTGAATGTAGACGATCTGTTTGCTCTGCGGAGATCCTTGGGCTTCGAGCGTAGACGTCAAACAGGCAGATCTTCTTTTGATCGATCTGGCTCAGAAGTACATGGTTTTCAGCATCCGCTCTTCTCCAGGCCTTCACAAACTGGCAATACAGCGTCAGTTTCAGCAAGTGCTGGCAGTATATCCAGGCATTCAGAAGCTGGCAGCTACGACGTAGCACAATTTTACATGTTTGATTCACCGGTTCTACCATTTGATCAAGTACCAGTTGATCCTTTTAGTGATCGTTTAGGAGGTGGTGGGGCACCTCCTCCTTTGACTGATTATTCTGTTGTGGGTATGGATTCATCAAGAAGAGGGGTTGGTGATAGTCGGTGGACTGATGTAGGTCACCCTCAGCCTAGTAGCCTATCTGCTTCAATTGCCCAGTTGATAGAAGAACATTTTATTACCAACTTGCGTGCTTCTGCTCCAGTAGATACTGTTGTTGAAAGGGAGACTAATACCACAGAAGTCCAAGAGCAGCAGCAGCCGGATGTTCCTCCATCTGTTGGAAGCGAAACTGTTTTGGGTGATGGTAACGAAGGTGGTGAACAAAGTGAAGAACATGAACTGTTAAATAACAATGAAGTTATGCACCCTCTTCCTTTGAACAGTACACCGAATGAGATTGATAGAATGGAAGTTGGGGAAGGGGGTGGAGCACCTATTGAGCAAGTAGACCGTGAAGCAGTGCATCTTATCTCCAGTGCTCAGGGTCAATCTGATACTTCCGGTATTCAAAATGTGTCTGTTACCGCTATCCCTCCTCCAGTAGATGATCCTGATTCTAATTTTCAACCAAGTGTTGATGTAGATATGAGTAGTGATGGTGCAGAGGGAAATCAAAGTGTACAACCTTCACCTTTGGACGGTGACAACAATGAGCTCTCATCCATGGAAGCTACACAAGATGTGAGGAATGATGAACAAGTTGATGAAGGTAGCTTGGATGGTAGGGCACCTGAAGTGAATGCCATCGATCCTACATTTTTGGAAGCGCTCCCTGAAGATTTGCGGGCAGAAGTCCTTGCTTCTCAGCAAGCTCAGTCCGTCCAGCCTCCAACTTATGAACCACCTTCAGTAGACGACATAGATCCTGAATTTTTGGCTGCGCTTCCCCCAGAGATCCAAAGAGAGGTTCTTGCTCAACAAAGAGCACAAAGGATGTTACAGCAGTCACAAGGACAGCCAGTTGACATGGATAATGCTTCGATTATTGCTACTCTACCTGCTGATTTACGAGAAGAGGTTCTCTTAACTTCTTCAGAAGCAGTTTTGGCAGCTTTGCCTCCACCTTTACTTGCGGAAGCGCAGATGCTCAGAGACCGAGCAATGAGGCACTATCAAGCTCGTAGTAGAGTTTTTGGAAGTAGCCACAGGCTAAATAATCGGAGGAATGGTTTGGGTTATAGGCTGACAGGGATGGAGAGGGGTGTTGGAGTCACTATTGGTCAGAGGGATGTTTCGTCTTCTGCAGATGGCTTGAAAGTAAAAGAGATTGAAGGAGACCCTCTTGTGAATGCTGATGCCTTGAAATCACTAATCAGGCTATTACGACTAGCACAGCCGTTGGGAAAAGGCCTTCTGCAGAGGCTTCTTTTAAATCTATGTGCTCACAGTTTTACAAGAGCAAATCTGGTTCAACTTTTACTGGATATGATTAGGCCAGAGATGGAAACATTACCGAGCGAGTTGGCTTTAACTAATCCGCAAAGACTCTATGGCTGTCAATTAAATGTTGTTTATGGTCGATCCCAGCTGTTGAATGGTCTTCCTCCTTTAGTGTTCCGTCGGGTGCTTGAGGTTTTGACGTACTTGGCTACAAATCATTCGGCTGTTGCTGACATGTTGTTTTATTTTGATTCGTCACTTCTATCCCAGTTGTCAAGCCGAAAAGGTAAAGAGAAAGTTACTCATGAGACAGATTCCCGGGATCTGGAGATACCTCTGGTTGTCTTCCTTAAACTGCTTAATCGGCCTCAGCTTTTGCAGAGTACATCTCATCTAGCGCTGGTCATGGGCTTGCTGCAAGTAGTTGTCTACACAGCAGCGTCCCGAATTGAGGGTTGGTCTCCGTCATCAGGAGTGCCTGAGAAACTAGAAAACAAACCTGTCGGTGAAGAAGCTTCAAGTGAAACACAAAAAGATGCTGAATCTGAGCTATCTGTTGCAAGAAGAAAGAATTGTGCTGAATTATATAACATATTCTTGCAGTTACCACAGTCGGACCTCTGCAATCTTTGCATGCTTCTTGGATATGAAGGGTTATCGGATAAAATTTACTCGTTAGCGGGAGAGGTACTGAAAAAGTTGGCTGCCGTAGATGTTACTCATCGCAAGTTTTTTACAAAAGAACTCTCAGAGTTGGCGAGTGGTTTGAGTTCCTCAACTGTCCGTGTGCTGGCAACACTAAGCACTACACAGAAGATGAGTCAGAATACATGTTCCATGGCAGGTGCTTCAATTCTCCGTGTTCTGCAAGTGCTTAGCTCCCTAACTTCCACTATTGATGATAGCAATGTGGGAACCGACAAAGAAACAGATCAGGAGGAACAAAACATTATGCAGGGACTAAAGGTGGCATTAGAGCCCTTGTGGCAGGAACTTGGCCAGTGTATCAGCATGACTGAGTTGCAGCTCGATCATACTGCAGCTACATCAAATGTCAATCCTGGAGATCATGTTCTAGGGATCTCTCCTACGTCATCTCTCTCTCCAGGAACTCAGAGTCTCCTGCCTCTTATTGAGGCTTTCTTTGTTCTCTGTGAGAAGATTCAAACTCCGTCAATGTTACAGCAGGATGCAACTGTGACAGCGGGAGAAGTAAAGGAGTCGTCTACTCATGGTTCTTCATCGAAAACCATTGTAGATTCTCAGAAGAAAATTGATGGTTCTGTTACATTTTCAAAGTTTGTGGAGAAGCACAGGCGGCTTTTAAATTCATTTGTTAGGCAAAATCCAAGTTTGCTGGAGAAGTCTTTTTCAATGATGCTCAAGGCACCAAGGCTGATTGATTTTGACAACAAGAAAGCGTACTTCAGGTCAAGAATAAGGCACCAACATGATCAACATATTTCTGGGCCATTACGTATTAGTGTCCGCCGAGCTTATGTGTTGGAAGATTCATACAACCAGTTACGTATGCGCTCCCCACAGGATCTGAAGGGACGTCTGAATGTGCAGTTTCAAGGTGAGGAAGGTATTGATGCTGGTGGCCTGACCCGAGAATGGTATCAGTTATTGTCAAGAGTTATATTTGACAAAGGAGCGTTGCTCTTCACTACCGTTGGAAATGATGCCACCTTCCAACCGAATCCCAATTCTGTTTACCAAACTGAGCATCTATCATACTTCAAATTTGTTGGTCGCATGGTGGCAAAGGCGTTGTTTGATGGGCAGCTTTTGGATGTCTATTTCACCCGTTCTTTCTATAAACACATACTTGGTGTGAAGGTGACTTATCATGACATTGAGGCGGTGGATCCTGATTACTACAAGAATTTGAAGTGGCTATTAGAGAATGATGTGAGCGACATACTCGACCTCACATTTAGTATGGACGCAGATGAGGAAAAACACATTCTTTACGAGAAGACTGAGGTGACGGACTATGAACTTAAACCTGGAGGACGAAACATACGGGTAACAGAAGAAACAAAACATGAATATGTTGACCTTGTGGCCGACCACATACTTACCAGTGCTATACGCCCTCAAATCAACGCTTTCCTAGAAGGCTTAAATGAGTTGATACCTCGTGAGCTTGTATCAATTTTCAATGATAAAGAGCTTGAGCTCCTAATCAGCGGGTTGCCTGAGATTGATTTTGATGATCTAAAAGCAAATACCGAGTATACCAGCTACACGGTAGGGTCCCCTGTTATTCGTTGGTTCTGGGAGGTTGTCAAAGCTTTCAGCAAAGAAGATATGGCTAGATTTCTTCAATTTGTCACTGGAACATCAAAGGTTCCCTTGGAAGGCTTCAAGGCACTGCAAGGTATTTCTGGCCCTCAAAGATTACAAATCCACAAAGCATATGGATCTCCGGAGCGGCTGCCATCAGCTCATACATGTTTTAACCAACTAGACCTCCCTGAGTATCAATCTAAGGAACAAGTTCAGGAACGCCTGCTTCTTGCAATTCACGAAGCCAATGAAGGTTTTGGGTTTGCTTGA

Protein Analysis

3658

Amino Acids

403.61

Weight (kDa)

4.81

Isoelectric Point (pI)

48.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 86 - 164 9e-11 Domain of Unknown Function (DUF908)
DUF908 PF06012 201 - 356 2.9e-27 Domain of Unknown Function (DUF908)
DUF913 PF06025 416 - 764 2.2e-85 Domain of Unknown Function (DUF913)
UBA PF00627 1272 - 1309 6.5e-08 UBA/TS-N domain
UBA_7 PF22562 1273 - 1317 2.6e-13 UBA-like domain
UBM PF14377 2587 - 2616 8.4e-09 Ubiquitin binding region
UBM PF14377 2626 - 2656 2.5e-10 Ubiquitin binding region
UBM PF14377 2660 - 2693 2.5e-08 Ubiquitin binding region
HECT PF00632 3347 - 3657 4.7e-96 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 9245
AasI GACNNNNNNGTC 1 cut(s) 6075
AatII GACGTC 3 cut(s) 521, 6820, 9973
Acc16I TGCGCA 1 cut(s) 1949
Acc36I ACCTGC 2 cut(s) 8038, 9245
Acc65I GGTACC 2 cut(s) 3228, 5462
AccB1I GGYRCC 8 cut(s) 2907, 3228, 4984, 5462, 7063, 7759, 9799, 9855
AccB7I CCANNNNNTGG 3 cut(s) 4606, 4777, 7310
AccBSI CCGCTC 2 cut(s) 6880, 10852
AccI GTMKAC 9 cut(s) 794, 6133, 6771, 6814, 7479, 7884, 8841, 9638, 10655
AccII CGCG 2 cut(s) 2817, 4565
AccIII TCCGGA 2 cut(s) 1587, 10846
AcoI YGGCCR 5 cut(s) 4193, 4350, 5403, 9409, 10482
AcyI GRCGYC 4 cut(s) 518, 5639, 6817, 9970
AdeI CACNNNGTG 1 cut(s) 611
AfeI AGCGCT 2 cut(s) 7800, 8811
AflII CTTAAG 2 cut(s) 2383, 4385
AflIII ACRYGT 5 cut(s) 4563, 6987, 8646, 9242, 10871
AgeI ACCGGT 1 cut(s) 7000
AhlI ACTAGT 1 cut(s) 1883
AleI CACNNNNGTG 2 cut(s) 540, 3220
AloI GAACNNNNNNTCC 4 cut(s) 1504, 1536, 9468, 9500
Alw21I GWGCWC 8 cut(s) 2378, 3493, 7465, 7513, 7689, 7960, 8416, 10599
Ama87I CYCGRG 3 cut(s) 5981, 8730, 10023
Aor13HI TCCGGA 2 cut(s) 1587, 10846
Aor51HI AGCGCT 2 cut(s) 7800, 8811
ArsI GACNNNNNNTTYG 6 cut(s) 161, 193, 2458, 2490, 6764, 6796
AseI ATTAAT 1 cut(s) 1454
AsiGI ACCGGT 1 cut(s) 7000
Asp700I GAANNNNTTC 8 cut(s) 22, 1434, 2199, 5185, 5743, 6279, 8049, 10917
Asp718I GGTACC 2 cut(s) 3228, 5462
AspLEI GCGC 6 cut(s) 1950, 7801, 7915, 8113, 8812, 9948
AsuC2I CCSGG 3 cut(s) 784, 8731, 8732
AsuII TTCGAA 1 cut(s) 10
AvaI CYCGRG 3 cut(s) 5981, 8730, 10023
AvaII GGWCC 7 cut(s) 151, 1819, 2461, 5511, 5603, 9028, 10674
AxyI CCTNAGG 1 cut(s) 3939
BaeGI GKGCMC 3 cut(s) 4741, 7066, 7762
BaeI ACNNNNGTAYC 4 cut(s) 5454, 5487, 7230, 7263
BalI TGGCCA 2 cut(s) 5405, 9411
BamHI GGATCC 2 cut(s) 3943, 10282
BanI GGYRCC 8 cut(s) 2907, 3228, 4984, 5462, 7063, 7759, 9799, 9855
BanII GRGCYC 3 cut(s) 7689, 9393, 10599
BauI CACGAG 4 cut(s) 4320, 6635, 6642, 10557
Bbv12I GWGCWC 8 cut(s) 2378, 3493, 7465, 7513, 7689, 7960, 8416, 10599
BbvCI CCTCAGC 3 cut(s) 2343, 7155, 8781
BceAI ACGGC 6 cut(s) 3370, 4337, 4880, 6736, 8353, 9104
BciVI GTATCC 7 cut(s) 916, 939, 2782, 3745, 4018, 4249, 5479
BclI TGATCA 7 cut(s) 544, 703, 4710, 5233, 6316, 7015, 9865
BcnI CCSGG 3 cut(s) 784, 8731, 8732
BcuI ACTAGT 1 cut(s) 1883
BfoI RGCGCY 2 cut(s) 7802, 8813
BfrI CTTAAG 2 cut(s) 2383, 4385
BfuAI ACCTGC 2 cut(s) 8038, 9245
BfuI GTATCC 7 cut(s) 916, 939, 2782, 3745, 4018, 4249, 5479
BglI GCCNNNNNGGC 2 cut(s) 2499, 9397
BglII AGATCT 2 cut(s) 2480, 6830
BlpI GCTNAGC 3 cut(s) 6012, 6747, 9287
BmcAI AGTACT 4 cut(s) 1249, 2707, 3409, 4299
Bme18I GGWCC 7 cut(s) 151, 1819, 2461, 5511, 5603, 9028, 10674
BmeT110I CYCGRG 3 cut(s) 5981, 8730, 10023
BmrI ACTGGG 3 cut(s) 714, 7180, 8674
BmuI ACTGGG 3 cut(s) 714, 7180, 8674
BoxI GACNNNNGTC 1 cut(s) 4480
BplI GAGNNNNNCTC 8 cut(s) 4516, 4548, 6655, 6687, 8785, 8817, 10059, 10091
Bpu10I CCTNAGC 4 cut(s) 2343, 7155, 7512, 8781
Bpu1102I GCTNAGC 3 cut(s) 6012, 6747, 9287
Bpu14I TTCGAA 1 cut(s) 10
BpuMI CCSGG 3 cut(s) 784, 8731, 8732
Bsa29I ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
BsaAI YACGTR 5 cut(s) 190, 1496, 3516, 9890, 9941
BsaBI GATNNNNATC 2 cut(s) 1221, 3690
BsaHI GRCGYC 4 cut(s) 518, 5639, 6817, 9970
BsaI GGTCTC 5 cut(s) 1104, 3450, 8118, 8301, 8877
BsaWI WCCGGW 6 cut(s) 880, 1587, 5005, 7000, 7532, 10846
Bse118I RCCGGY 2 cut(s) 3225, 7000
Bse21I CCTNAGG 1 cut(s) 3939
Bse3DI GCAATG 4 cut(s) 2746, 4092, 8139, 9325
Bse8I GATNNNNATC 2 cut(s) 1221, 3690
BseAI TCCGGA 2 cut(s) 1587, 10846
BseCI ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
BseJI GATNNNNATC 2 cut(s) 1221, 3690
BseMI GCAATG 4 cut(s) 2746, 4092, 8139, 9325
BseRI GAGGAG 3 cut(s) 1565, 7059, 7557
BseSI GKGCMC 3 cut(s) 4741, 7066, 7762
BseYI CCCAGC 5 cut(s) 114, 486, 1227, 3194, 8556
BsgI GTGCAG 6 cut(s) 289, 3971, 4317, 5683, 7653, 10001
Bsh1236I CGCG 2 cut(s) 2817, 4565
BshNI GGYRCC 8 cut(s) 2907, 3228, 4984, 5462, 7063, 7759, 9799, 9855
BshTI ACCGGT 1 cut(s) 7000
BshVI ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
BsiHKAI GWGCWC 8 cut(s) 2378, 3493, 7465, 7513, 7689, 7960, 8416, 10599
BsiHKCI CYCGRG 3 cut(s) 5981, 8730, 10023
BslFI GGGAC 6 cut(s) 2494, 5192, 8839, 9384, 9981, 10660
BsmBI CGTCTC 2 cut(s) 2192, 5473
BsmFI GGGAC 6 cut(s) 2494, 5192, 8839, 9384, 9981, 10660
BsmI GAATGC 8 cut(s) 801, 1574, 1761, 2215, 2347, 6949, 7777, 8326
Bso31I GGTCTC 5 cut(s) 1104, 3450, 8118, 8301, 8877
BsoBI CYCGRG 3 cut(s) 5981, 8730, 10023
Bsp119I TTCGAA 1 cut(s) 10
Bsp13I TCCGGA 2 cut(s) 1587, 10846
Bsp1407I TGTACA 4 cut(s) 3032, 3553, 4234, 7651
Bsp1720I GCTNAGC 3 cut(s) 6012, 6747, 9287
Bsp19I CCATGG 4 cut(s) 3322, 4644, 7695, 9249
Bsp68I TCGCGA 1 cut(s) 2817
BspDI ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
BspEI TCCGGA 2 cut(s) 1587, 10846
BspFNI CGCG 2 cut(s) 2817, 4565
BspHI TCATGA 4 cut(s) 1638, 5167, 8716, 10264
BspMAI CTGCAG 8 cut(s) 396, 1015, 1747, 3633, 4464, 8278, 8391, 9454
BspMI ACCTGC 2 cut(s) 8038, 9245
BspQI GCTCTTC 4 cut(s) 13, 2084, 6887, 10082
BspT104I TTCGAA 1 cut(s) 10
BspT107I GGYRCC 8 cut(s) 2907, 3228, 4984, 5462, 7063, 7759, 9799, 9855
BspTI CTTAAG 2 cut(s) 2383, 4385
BspTNI GGTCTC 5 cut(s) 1104, 3450, 8118, 8301, 8877
BsrBI CCGCTC 2 cut(s) 6880, 10852
BsrDI GCAATG 4 cut(s) 2746, 4092, 8139, 9325
BsrFI RCCGGY 2 cut(s) 3225, 7000
BsrGI TGTACA 4 cut(s) 3032, 3553, 4234, 7651
BssAI RCCGGY 2 cut(s) 3225, 7000
BssNAI GTATAC 2 cut(s) 795, 10656
BssNI GRCGYC 4 cut(s) 518, 5639, 6817, 9970
BssSI CACGAG 4 cut(s) 4320, 6635, 6642, 10557
Bst1107I GTATAC 2 cut(s) 795, 10656
Bst2BI CACGAG 4 cut(s) 4320, 6635, 6642, 10557
BstACI GRCGYC 4 cut(s) 518, 5639, 6817, 9970
BstAFI CTTAAG 2 cut(s) 2383, 4385
BstAPI GCANNNNNTGC 2 cut(s) 4723, 9042
BstAUI TGTACA 4 cut(s) 3032, 3553, 4234, 7651
BstBAI YACGTR 5 cut(s) 190, 1496, 3516, 9890, 9941
BstBI TTCGAA 1 cut(s) 10
BstDSI CCRYGG 4 cut(s) 3322, 4644, 7695, 9249
BstEII GGTNACC 1 cut(s) 7148
BstENI CCTNNNNNAGG 1 cut(s) 5737
BstFNI CGCG 2 cut(s) 2817, 4565
BstH2I RGCGCY 2 cut(s) 7802, 8813
BstHHI GCGC 6 cut(s) 1950, 7801, 7915, 8113, 8812, 9948
BstPAI GACNNNNGTC 1 cut(s) 4480
BstPI GGTNACC 1 cut(s) 7148
BstSLI GKGCMC 3 cut(s) 4741, 7066, 7762
BstSNI TACGTA 3 cut(s) 3516, 9890, 9941
BstUI CGCG 2 cut(s) 2817, 4565
BstXI CCANNNNNNTGG 1 cut(s) 6701
BstZ17I GTATAC 2 cut(s) 795, 10656
Bsu15I ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
Bsu36I CCTNAGG 1 cut(s) 3939
BsuI GTATCC 7 cut(s) 916, 939, 2782, 3745, 4018, 4249, 5479
BsuTUI ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
BtgI CCRYGG 4 cut(s) 3322, 4644, 7695, 9249
BtgZI GCGATG 3 cut(s) 2798, 6270, 9119
BtsI GCAGTG 4 cut(s) 1775, 5119, 7497, 10790
BtuMI TCGCGA 1 cut(s) 2817
BveI ACCTGC 2 cut(s) 8038, 9245
CciI TCATGA 4 cut(s) 1638, 5167, 8716, 10264
CfoI GCGC 6 cut(s) 1950, 7801, 7915, 8113, 8812, 9948
Cfr10I RCCGGY 2 cut(s) 3225, 7000
Cfr9I CCCGGG 1 cut(s) 8730
ClaI ATCGAT 4 cut(s) 4613, 5569, 6844, 7779
CseI GACGC 6 cut(s) 3884, 4571, 5628, 6903, 8841, 10370
CsiI ACCWGGT 2 cut(s) 1894, 5796
CspAI ACCGGT 1 cut(s) 7000
CspCI CAANNNNNGTGG 2 cut(s) 9696, 9731
DraI TTTAAA 5 cut(s) 3018, 4557, 5133, 8403, 9738
DraIII CACNNNGTG 1 cut(s) 611
DrdI GACNNNNNNGTC 1 cut(s) 6075
DseDI GACNNNNNNGTC 1 cut(s) 6075
EaeI YGGCCR 5 cut(s) 4193, 4350, 5403, 9409, 10482
EciI GGCGGA 2 cut(s) 2129, 9890
Ecl136II GAGCTC 2 cut(s) 7687, 10597
Eco105I TACGTA 3 cut(s) 3516, 9890, 9941
Eco147I AGGCCT 3 cut(s) 507, 6892, 8382
Eco24I GRGCYC 3 cut(s) 7689, 9393, 10599
Eco31I GGTCTC 5 cut(s) 1104, 3450, 8118, 8301, 8877
Eco47I GGWCC 7 cut(s) 151, 1819, 2461, 5511, 5603, 9028, 10674
Eco47III AGCGCT 2 cut(s) 7800, 8811
Eco53kI GAGCTC 2 cut(s) 7687, 10597
Eco81I CCTNAGG 1 cut(s) 3939
Eco88I CYCGRG 3 cut(s) 5981, 8730, 10023
Eco91I GGTNACC 1 cut(s) 7148
EcoICRI GAGCTC 2 cut(s) 7687, 10597
EcoNI CCTNNNNNAGG 1 cut(s) 5737
EcoO109I RGGNCCY 1 cut(s) 10674
EcoO65I GGTNACC 1 cut(s) 7148
EcoRI GAATTC 2 cut(s) 119, 5821
EcoT22I ATGCAT 4 cut(s) 803, 1580, 1763, 4427
EcoT38I GRGCYC 3 cut(s) 7689, 9393, 10599
Esp3I CGTCTC 2 cut(s) 2192, 5473
FaqI GGGAC 6 cut(s) 2494, 5192, 8839, 9384, 9981, 10660
FauI CCCGC 6 cut(s) 1019, 2873, 7809, 9085, 9610, 10601
FauNDI CATATG 2 cut(s) 1736, 10837
FbaI TGATCA 7 cut(s) 544, 703, 4710, 5233, 6316, 7015, 9865
FblI GTMKAC 9 cut(s) 794, 6133, 6771, 6814, 7479, 7884, 8841, 9638, 10655
FriOI GRGCYC 3 cut(s) 7689, 9393, 10599
FspI TGCGCA 1 cut(s) 1949
GlaI GCGC 6 cut(s) 1949, 7800, 7914, 8112, 8811, 9947
GsaI CCCAGC 5 cut(s) 118, 490, 1231, 3198, 8560
HaeII RGCGCY 2 cut(s) 7802, 8813
HgaI GACGC 6 cut(s) 3884, 4571, 5628, 6903, 8841, 10370
HhaI GCGC 6 cut(s) 1950, 7801, 7915, 8113, 8812, 9948
Hin1I GRCGYC 4 cut(s) 518, 5639, 6817, 9970
Hin6I GCGC 6 cut(s) 1948, 7799, 7913, 8111, 8810, 9946
HinP1I GCGC 6 cut(s) 1948, 7799, 7913, 8111, 8810, 9946
HincII GTYRAC 3 cut(s) 3508, 7996, 10474
HindII GTYRAC 3 cut(s) 3508, 7996, 10474
HindIII AAGCTT 7 cut(s) 5, 106, 4229, 5162, 5954, 8925, 10710
HpaI GTTAAC 1 cut(s) 3508
Hpy99I CGWCG 4 cut(s) 2907, 3090, 6974, 8595
Hsp92I GRCGYC 4 cut(s) 518, 5639, 6817, 9970
HspAI GCGC 6 cut(s) 1948, 7799, 7913, 8111, 8810, 9946
KflI GGGWCCC 1 cut(s) 10674
Kpn2I TCCGGA 2 cut(s) 1587, 10846
KpnI GGTACC 2 cut(s) 3232, 5466
Ksp22I TGATCA 7 cut(s) 544, 703, 4710, 5233, 6316, 7015, 9865
KspAI GTTAAC 1 cut(s) 3508
LguI GCTCTTC 4 cut(s) 13, 2084, 6887, 10082
MabI ACCWGGT 2 cut(s) 1894, 5796
MbiI CCGCTC 2 cut(s) 6880, 10852
MfeI CAATTG 3 cut(s) 1065, 4359, 7179
MlsI TGGCCA 2 cut(s) 5405, 9411
MluI ACGCGT 1 cut(s) 4563
MluNI TGGCCA 2 cut(s) 5405, 9411
Mox20I TGGCCA 2 cut(s) 5405, 9411
Mph1103I ATGCAT 4 cut(s) 803, 1580, 1763, 4427
MroI TCCGGA 2 cut(s) 1587, 10846
MroXI GAANNNNTTC 8 cut(s) 22, 1434, 2199, 5185, 5743, 6279, 8049, 10917
MscI TGGCCA 2 cut(s) 5405, 9411
MslI CAYNNNNRTG 6 cut(s) 540, 1637, 3220, 5943, 9861, 10467
Msp20I TGGCCA 2 cut(s) 5405, 9411
MspA1I CMGCKG 9 cut(s) 1295, 1691, 2036, 2354, 2945, 6011, 8560, 9617, 10608
MspCI CTTAAG 2 cut(s) 2383, 4385
MunI CAATTG 3 cut(s) 1065, 4359, 7179
Mva1269I GAATGC 8 cut(s) 801, 1574, 1761, 2215, 2347, 6949, 7777, 8326
MvnI CGCG 2 cut(s) 2817, 4565
NciI CCSGG 3 cut(s) 784, 8731, 8732
NcoI CCATGG 4 cut(s) 3322, 4644, 7695, 9249
NdeI CATATG 2 cut(s) 1736, 10837
NmeAIII GCCGAG 3 cut(s) 970, 3512, 9929
NruI TCGCGA 1 cut(s) 2817
NsbI TGCGCA 1 cut(s) 1949
NsiI ATGCAT 4 cut(s) 803, 1580, 1763, 4427
NspV TTCGAA 1 cut(s) 10
OliI CACNNNNGTG 2 cut(s) 540, 3220
PaeI GCATGC 2 cut(s) 661, 9049
PaeR7I CTCGAG 1 cut(s) 5981
PagI TCATGA 4 cut(s) 1638, 5167, 8716, 10264
PaqCI CACCTGC 1 cut(s) 9245
PasI CCCWGGG 1 cut(s) 4832
PceI AGGCCT 3 cut(s) 507, 6892, 8382
PciI ACATGT 4 cut(s) 6987, 8646, 9242, 10871
PciSI GCTCTTC 4 cut(s) 13, 2084, 6887, 10082
PctI GAATGC 8 cut(s) 801, 1574, 1761, 2215, 2347, 6949, 7777, 8326
PdmI GAANNNNTTC 8 cut(s) 22, 1434, 2199, 5185, 5743, 6279, 8049, 10917
PflFI GACNNNGTC 1 cut(s) 5249
PflMI CCANNNNNTGG 3 cut(s) 4606, 4777, 7310
PfoI TCCNGGA 2 cut(s) 9472, 9517
PinAI ACCGGT 1 cut(s) 7000
Ppu21I YACGTR 5 cut(s) 190, 1496, 3516, 9890, 9941
PpuMI RGGWCCY 1 cut(s) 10674
PscI ACATGT 4 cut(s) 6987, 8646, 9242, 10871
PshAI GACNNNNGTC 1 cut(s) 4480
PshBI ATTAAT 1 cut(s) 1454
Psp124BI GAGCTC 2 cut(s) 7689, 10599
Psp5II RGGWCCY 1 cut(s) 10674
PspEI GGTNACC 1 cut(s) 7148
PspFI CCCAGC 5 cut(s) 114, 486, 1227, 3194, 8556
PspPPI RGGWCCY 1 cut(s) 10674
PstI CTGCAG 8 cut(s) 396, 1015, 1747, 3633, 4464, 8278, 8391, 9454
PsyI GACNNNGTC 1 cut(s) 5249
PvuII CAGCTG 4 cut(s) 1295, 1691, 2354, 8560
RruI TCGCGA 1 cut(s) 2817
RseI CAYNNNNRTG 6 cut(s) 540, 1637, 3220, 5943, 9861, 10467
SacI GAGCTC 2 cut(s) 7689, 10599
SapI GCTCTTC 4 cut(s) 13, 2084, 6887, 10082
ScaI AGTACT 4 cut(s) 1249, 2707, 3409, 4299
SexAI ACCWGGT 2 cut(s) 1894, 5796
Sfr274I CTCGAG 1 cut(s) 5981
SfuI TTCGAA 1 cut(s) 10
SinI GGWCC 7 cut(s) 151, 1819, 2461, 5511, 5603, 9028, 10674
SlaI CTCGAG 1 cut(s) 5981
SmaI CCCGGG 1 cut(s) 8732
SmiMI CAYNNNNRTG 6 cut(s) 540, 1637, 3220, 5943, 9861, 10467
SnaBI TACGTA 3 cut(s) 3516, 9890, 9941
SpeI ACTAGT 1 cut(s) 1883
SphI GCATGC 2 cut(s) 661, 9049
SseBI AGGCCT 3 cut(s) 507, 6892, 8382
SspI AATATT 2 cut(s) 1851, 2370
SstI GAGCTC 2 cut(s) 7689, 10599
StuI AGGCCT 3 cut(s) 507, 6892, 8382
TaqII GACCGA 2 cut(s) 1836, 8142
TauI GCSGC 3 cut(s) 6011, 9733, 10855
TspMI CCCGGG 1 cut(s) 8730
Tth111I GACNNNGTC 1 cut(s) 5249
Van91I CCANNNNNTGG 3 cut(s) 4606, 4777, 7310
Vha464I CTTAAG 2 cut(s) 2383, 4385
VpaK11BI GGWCC 7 cut(s) 151, 1819, 2461, 5511, 5603, 9028, 10674
VspI ATTAAT 1 cut(s) 1454
XagI CCTNNNNNAGG 1 cut(s) 5737
XcmI CCANNNNNNNNNTGG 2 cut(s) 8564, 10835
XhoI CTCGAG 1 cut(s) 5981
XmaI CCCGGG 1 cut(s) 8730
XmiI GTMKAC 9 cut(s) 794, 6133, 6771, 6814, 7479, 7884, 8841, 9638, 10655
XmnI GAANNNNTTC 8 cut(s) 22, 1434, 2199, 5185, 5743, 6279, 8049, 10917
ZraI GACGTC 3 cut(s) 519, 6818, 9971
ZrmI AGTACT 4 cut(s) 1249, 2707, 3409, 4299
Zsp2I ATGCAT 4 cut(s) 803, 1580, 1763, 4427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.