RLG00000036641

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0007872
Physical Location & Seq
Reverse (-)
82841160 .. 82859314
18155 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036641

Sequence Viewer

Length: 11607 bp
ATGCATTTCTGTTTATCTTGTGGATTTGTGGGGGAAGGAAGGCTAGGCGCACTGTTATGTGGTGCAAGTGAGAGCTGTTGGAAGATTAAGCACCTAAAAGACATATCTTGGGGATACAAGGGCTACGGCTTTATCAAAAGAAGTGGCAAGATCTGCTCAAGGAGGAATGGAGGCTTCTCTCTCCCTAAAGGAGTTCTTGATATTAAGAGATCAGCATTTGGGTTCGACTTGGATGCCGAGAAGTTGGTCTCTGTCATTGAGGATAAGTTTTTGTTCCGAACCATTTCAGTCTCTGCTCTTCGATCAATTATTGATATTCCAGCGATTGATCGGTTCGCAATTCAAAGCCGTTCTGATTCGGGCAATGCTTTCAGTTCCAACATGAAGTTGAAGAGAAGGAGGGCCGTGGAAGTGCCTCCGAAAATTAGATCCTTCATCAACAGCGTCACTGCTGTTCCACTTGAGAATATAGAGGAACATTTAAAAGGTTTTGTCTGGGAGTACGATAAGGGAGATTTCCATCATTGGGTTGATCTGTTCAACCATTTTGATTCATTTTTTGAGAAGCATATAAAATCTAGGAAGGACTTGCAGGTTGAGGATAATTTCCTCGACTCTGATCCTCCTTTTCCAAGAGAAGCTCTTCTTCAAGTTCTCCGCGTGATAAGAATAATTTTGGAGAACTGCACAAATAAACACTTCTACAGTTCATATGAGCAGCATCTCTCATCTTTGCTTGCTTGCACCGATGCGGATGTGGTTGAGGCTTGCCTGCAGACTCTGGCCGCATTTTTGAAGAAAACAGTAGGAAAGTATTCCATCAGAGATGCTTCACTAAATTCAAAGTTATTTGCTCTTGCACAAGGTTGGGGAGGAAAGGAAGAGGGTCTTGGATTAATTGCCTGTGCAGTACAGGATGGTTGTGACCCTATTGCTTATGAGTTAGGATGCACCCTTCACTTTGAGTTTTATGCGTTGAAAGATGCAAGTGAATTACCAACCACAGAACAGCAGACCCAAGGTTTACAAATCATTCATTTACCTAACATCAACACTCATCCAGAGACTGATCTTGAGCTTTTGAGTAAGCTAATTGCCGAATACAAAGTACCCAGTAGTTTGAGATTTGCTTTATTGACAAGATTGCGTTTTGCAAGGGCTTTTGGCTCTTTAGCTACTCGTCAACAGTATGCCTGCATTCGTCTGTATGCCTTCATAGTTCTTGTTCAAGCAAATAGTGATGGCGATGACCTTGTTTCTTTCTTCAACACTGAACCGGAGTTTGTCAATGAACTAGTGTCATTATTGAGCTTGGAAGATGTAGTTCCTGAGAAAATTCGAATTCTATGTCTTCTTTCATTGGTTGCTCTTTCTCAAGATCGGGCCCGACAGCCTAATGTTTTGACTGCTGTCACATCTGGTGGGCATCGTGGAATCCTATCCAGCCTTATGCAGAAGGCCATTGATTCCGTCATCAGTGATACATCAAAGTGGTCTGTTGTTTTTGCTGAGGCTCTGTTATCTCTTGTTACAGTTTTGGTTTCATCATCATCCGGTTGTTCAGCCATGCGTGAAGCTGGATTTATCCCCACCCTTCTCCCTTTGCTTAAAGATACAAATCCGCAGCACCTACATTTGGTCAGCACATCTGTGCATATTTTAGAAGCTTTTATGGATTACAGTAATCCAGCTGCTGCATTGTTCAGGGACTTGGGCGGTTTAGATGATACCATCTCTCGCCTGCAGCTGGAAGTGTCTCATGTAGAAAATGGTCCAAAACAACAAGATGAAGATTCTAGTACCTCTGGAAGTGCACAAGTAGTTGCAGGAACTTCCACTGAGATAGACAGCATGCAACCTCTGTATTCAGAACCTCTTGTTTCATATCATCGACGACTGCTGATGAAAGCTCTACTGCGTGCTATATCTCTGGGGACTTATGCACCTGGAAATACTGCCCGTGTTTATGGCTCGGAGGAGAGTCTATTGCCTCAATGCTTATGCATAATCTTTAAAAGGGCAAAAGATTTTGGTGGTGGGGTGTTTTCACTTGCGGCTTCTGTCATGAGTGATTTAATTCACAAAGATCCTACCTGTTTTCCAGTTTTAGATGAAGCAGGTCTTCCTTCTACCTTTCTGGATGCTATAATGGATGGCGTTCTTTGCTCAACAGAGGCCATTACATGCATCCCACAGTGTCTAGATGCCCTGTGTCTAAATAATAATGGTCTTCAGGCTGTGAAAGATCGCAATGCATTGAGGTGCTTTGTGAAGATATTTACTTCAAGAACCTATCTGCGTGCTCTAACAAGTGATACTCCTGTCTCCCTATCTAGTGGATTGGATGAATTAATGCGCCATGCCTCCTCATTACGTGGTCCTGGTGTGGATATGCTAATTGAGATTTTAAATGCCATCTCAAAAATTGGTCATGGGGGTGATTCTTCTCTCACGTCAACTGAACTTTTATCTTCTTCTACTCCTGTTCCCATGGAAACTGATGGAGAAGAAAGGAATGTAGTCATGTCAGATGATAGGGAGTCATCCAAGATGGATAGTTCGGAGCAGGGAACTGAAACATCTTCTGATTCTTTAGTGGGAAATGCTGAAGTATTGCTTCCTGATTGTGTGAGCAATGTTGCACGTCTTCTTGAAACTATACTTCAGAATGGTGACACTTGTCGTATATTTGTGGAGAAGAAGGGAATAGAAGCTGTCCTGCAGTTGTTTACCTTGCCTTTAATGCCTCTTTCTGTTTCAGTTGGTCAGAGTATATCTATTGCATTTAAGAACTTCTCACCACAACATTCTGCTTCTTTGGCTCGGGCAGTATGTTCATTTTTGAGAGAGCATCTGAAATCAACAAATGAACTCTTAGTTTCAGTTGGTGGGACTCAACTTTCTTTGGTGGAATCTGCAAAGCAAACTAAGGTTTTGAAGCATCTTTCCAGTCTTGAAGCTATTCTGTCTCTGTCTAATGTTCTATTGAAAGGGACGACTACTGTGGTGTCTGAACTGGGTGCAGCAGATGCTGATGTATTGAAAGATCTTGGGAGTACATACAGGGAAATCCTTTGGCAAATCTCTCTGTGTAATGATGTCAAGTCTGATGAGAAGATCAATGCTGAACAAGAACAAGACATTGCTGAGGCAGCTCCATCTAATGCTTCGGGAAGGGAGAGTGATGATGATGCTAATACTCCCATGGTGAGATACATGAACCCAGTTTCTATTAGGAATCAGCCCTTTTGGGGTGGAGAGCGTGAGTTCCTTTCAGTTGTTCGCAGTGGTGAAGGTTTGCACCGTCGTAGTACTCGGCATGGGATTACACGCATGAGAGGAGGAAGGACAGGCCGGCATTTGGAGGCTTTACATATTGATTCTGAATCTTCTTCCACAGTATCGGAGGCAACTACATCCCAGGATTTGAAAAAGAAAAGTCCTGATGTGCTTGTTACGGAAATTCTTAACAAGCTGGCTTCCACTCTACGTTCCTTCTTCACAGCTCTTGTCAAGGGATTCACATCACCAAATAGGCGTAGAGTTGACTCTGGATCATTGAGTTTGGCCTCAAAAACTCTTGGAACTGCCCTAGCTAAAGTTTATTTTGAGGCTCTTAGTTTCTCTGGGCATTCTACTTCAGCTGGGCTTGATACTTCATTATCAGTCAAGTGTCGATACCTTGGAAAAGTAGTGGATGATATGATGGCACTTACATTTGATAGCAGACGACGTACTTGTTATACTGCAACAATTAATAATTTCTATGTCCATGGTACCTTTAAGGAGCTGCTCACAACATTTGAAGCTACTAGTCAGTTGTTATGGACCCTACCATATTGTATGCCAACATCAGGCATTGATCATGAAAAGACAGGTGAAGGCAGTAAACTGTCCCATAGTTCGTGGCTGCTTGAGACTCTACAAAGCTATTGCCGTGTGCTGGAGTATTTTGTTAATTCTTCTTTACTGTTATCTACAACCTCTGCATCCCAGGCACAGTTGCTTGTTCAGCCAGTTGCAGTTGGTCTATCAATTGGGCTTTTCCCTGTGCCAAGGGAACCAGAAGTTTTTGTTCGTATGCTTCAGTCTCAAGTTCTTGATGTAATACTTCCTATCTGGAACCACCCCATGTTTCCAAATTGTAGTCCAGGATTCGTTGCTTCCATTGTTTCACTTGTTATGCATGTATATTCTGGTGTGGGAGATGTGAAGCAGAATCGCAGTGGCATTGCTGGAACTGCAAACCAAAGATTCATGCCTCCACCACTTGATGAAGGTACTATTACTACCATTATGGAGATGGGTTTTTCAAGGGCCAGAGCAGAAGAAGCGCTTAGGAGGGTGGAAACAAATAGCGTTGAAATGGCCATGGAGTGGCTTTGCAGCCATTCTGAGGATCCTGTGCAGGAGGATGATGAACTTGCCCGGGCACTTGCTCTATCACTGGGAAATTCATCTGAAACATCTAAAGCTGATAATGTTGACAAGTCTGTAGATGTGCTGGCAGAAGAGAGTTGTGTGAAAGCTCCTCCAGTTGATGATATTCTTGCTGCATCAGTTAAGTTGTTTCAGAGCAGTGACACAATGGCCTTCCCATTGACAGATTTGCTTGTGACACTTAGCAATCGGAACAAAGGTGAAGACCGTCCTAAAGTTGCATCTTATCTAATTCAGCAGCTCAAGCTTTGTCCATTGGATTTTTCTAAGGATACCAGTTCTTTGAGTATGTTATCACATGTTATAGCATTGCTGCTTTCTGAGGATGGAAGTACAAGGGAAATTGCTGCACAGAATGGTATTGTGTCTGCTGCAGTAGATATCTTAATGAATTTTAAGGCCAAAGACGAGTCAGGCAATGAACTTCTTGTTCCAAAATGTATTAGTGCTCTACTGCTTATTTTGGATAACATGTTGCAATCAAGGCCCAGAATTTCTGAGAACATTGAAGAGACTCAGACAGGATCTCTGTCTGAACTATCTGGAGAGCGTACTTCCTTGTCAATCCCTGATGCAGTTACAGAGAAAAAACAGGATACTGATGCCCAGGAAAAAGATAGTGGCACTGGATTTGAGAAAATATTGGGCAAATCAACTGGTTATTTGACTATGGAAGAGAGTCAAAAGGTGCTGGCCGTTGCCTGTGATTTGATAAAGCAGCATGTCCCAGCTATGATCATGCAGGCTGTTTTACAGCTGTGTGCTCGTTTGACGAAAACTCATGCTCTTGCTTTGCAGTTTCTTGAACATGGAGGATTAGCAGCCCTTTTTGGCCTTCCCAGAAGTTGTTTTTTCCCTGGATATGACACTGTTGCATCTGCTATTGTTCGCCATCTCCTTGAAGATCCGCAAACACTGCAAACAGCAATGGAATTGGAAATTCGCCAAACACTGAGTGGCAACAGGCATGGTGCACGTACTTCTGCAAGGACATTTTTGACATCAATGGCACCTGTAATCTCTAGGGATCCGGTTGTTTTTATGAAAGCTGCTGCTGCTGTTTGTCAGTTGGAGACATCAGCAGGTAGGACATTCATTGTCTTAATGAAGGAAAAAGAAAAGGAAAAGGACAAACCTAAAGCATCTGGTGGTGAGGCTGGATTATCTTCCAATGAATCTATCCGTATTCCTGAAAATAAAGTACATGATGGATCAGGTAAATGCTTGAAAGGTCACAAGAAGATCCCTGCTAATCTTACTCAAGTGATTGATCAGCTGCTTGAAATTGTTTTGAAATACTATTTTCCAAAGAGCCAGGAAGATTGTCAGAATAACCTGTCTTCTATGGAGGTAGATGAACCTGCTACCAAGGTAAAGGGTAAATCAAAGGTTGATGAGACAAGGAAAGTGGAGTCTGAATCTGAAAGATCAGCAGGGCTGGCGAAGGTAACATTTGTTCTCAAGTTACTGAGTGATATTCTTCTCATGTATGTACATGCAGTTGGGGTTATACTTAAACGGGATTTGGAATTGGCTCAATTACGGGTAGCTAATCAACTGGAAGGTCCTGGACATGGTGGTATACTTCATCATGTGATTCATCGTTTGCTTCCACTCACCATTGATAAATCTGCTGGACCTGATGAATGGAGAGACAAGTTATCTGAAAAAGCTTCTTGGTTCCTGGTAGTTCTGTGTGGTCGTTCTGGTGAAGGGCGTAGAAGAGTAATTAATGAGCTTGTGAAAGCATTATCATCATTTTCAAACATTGATGGTAATTCTTCGAAGAGCATCTTATTGCCAGACAAAAAGGTTTATGCTTTTGTGGATTTGGTGTACTCTATTTTGTCTAAAAATTCATCATCAAGCAACTTACCTGGTACGGGGTTTTCACCTGACATAGCAAAAAGCATGATAGATGGGGGAATGATTCAGTGTCTGACTAGTATTCTCCAGGTGATTGATTTGGACCATCCTGATGCTCCCAAAACTGTGAATCTCATACTCAAGGCTTTAGAAAGTCTAACCAGGGCTGCTAATGCTAGTGAGCAATATTTTAAATCTGATGAGACAAACAAGAAAAAGTCCATGGTGTTAAATAGAAGATCTGATGATCAGGTAACTACTCCAGCTGATGATACATTGGGGCATAATCAGAATACAAGCAGTGAGCAGGATGTCAGAGATGCAGTACCAACTGAACAACAGGATCAAGGAACTTCTCAAAGTGAAGGTAATCCTGATGCAACTCCGAACCAGTCAGGCGAACATGATATGAGAATTGAAGTTGAAGGACCATTGGCTTCTAACCAACCCATGGAGCTTGGGATGGATTTTATGCGTGAAGAGATGGAAGAAGGCAATGTGTTACACAACAATGACCAAATTGAAATGACTTTTCGTGTTGAGGGTAGGGCAGATGATGACATGGGTGATGAAGATGATGACATGGGTGATGATGGTGAGGATGATGAGGATGATGATGATGGAGAGGATGAGGATGAGGATATAGCAGAAGATGGTGGCGGCATGATGTCTCTGGCTGATACTGATGTGGAAGACCATGATGATACCGGCCTGGGAGATGATTATAATGATGAGATGATTGATGAAGATGATGATGATTTCCATGAGAATCGTGTCATAGAAGTGAGATGGAGGGAAGCCCTTGACGGGCTTGATCATTTACACGTACTTGGGCAACCTGGAGCTGCAAGTGGTCTGATTGATGTTGCTGCCGAACCTTTTGAAGGGGTTAATGTGGATGACCTTTTTGGTCTACGAAGGCCGTTAGGTTTTGATCGACGTCGTCAGACGAGTAGGTCTTCCTTTGAGCGATCTGTTACAGAAGCAAATGGCTTTCAACATCCTCTCCTTATAAGGCCTCCCCAGTCTGGAGATTTGGTATCCATGTGGTCAGCAGGTGGAAATTCATCCCGGGACTTAGAAGCTCTATCATCAGGGAGCTTTGATGTAGCTCATTTCTACATGTTTGATGCTCCTGTTCTTCCATATGATCATGTTCCAAGCAATCTTTTCGGTGACCGTTTGGGTGGTGCAGCCCCGCCACCATTGACTGATTATTCTGTAGGTATGGATTCATTGCAGTTATCGGGACGAAGAGGCCCAGGTGATGGCCGGTGGACTGATGATGGCCAGCCTCAAGCAGGTGCTCATGCTGCTGCTATTGCTCAGGCAGTTGAGGAACAGTTTATATCCCAATTGCGCAGTCTTGCTCCTGTTGACACCCCTGTTGAACCACATTCTCAGAATTCAGGAGTGCAGGAGAAACAGCCAGATGTGCCTCCTTCAACTGATGGTCAAGTAGTAGTAGATCGTGGTAACACCACCAGCCAACAAGTTGAAGATCAGCACCAAGACAGGGGTGTTGAGGTGACACATCAAGATATCTCCAGGCCTGAGGGTATTCCTTGCCAAGAACAAGTCAATCAAGAATCCTTTGTCGAAGATGCAGGGGGCTGTTTGCAGGAACCTGAACCAATGTCAATCCAGGCACCTTCTTTGGACAGTACACGAAATGATAACATGGACATTGGGGAGGGGAATGGCGCTGCTGAGCAAGAAGGGTCAATGCCGGAATTTGTCAACTCATCTGCAAGCACAAGGGTTGATTTACAACAGGAAGAGGGTTCTGAAGTGCCTGCTAATGTCAATGATGCTACAGTAGAAGCTATGGGTCAGGATGGATCTTCAGGCAATCAAGTCGGTGACATGCCAGCAAATTTCGGCTTCAATGTGTCTAATTCAGATGAGCCGTCAAGCCAAAACACATTGGTTGCTCCAGAAGCTAATCAGGCTGAACAAGTTACTTTGAACAATGAGGCTCCTGGTGCTAATGCAATTGACCCTACATTCTTGGAGGCTTTACCTGAAGAGTTGAGAGCGGAGGTTCTTGCTTCACAGCAAGCTCAGTCAGTTCAACCTCCTCCTTATGCGCCACCTTCTGCGGACGACATTGATCCTGAGTTTTTAGCCGCCCTTCCTCCGGATATTCAAGCAGAAGTTTTGGCTCAACAAAGAGCACAAAGAGTTGCACAACAGGCTGAAGGACAACCTGTTGACATGGACAATGCTTCAATAATTGCTACTTTTCCTGCTGATTTACGGGAAGAGGTACTTTTAACTTCTTCAGAAGCAGTTTTGTCTGCATTGCCTTCTCCACTACTGGCTGAAGCTCAAATGCTAAGAGATCGAGCAATGAGTCATTATCAGGCTCGCAGCCTTTTCGGGAGCAGCCACAGGCTGAATAATAGGAGAAATGGATTGGGTTTTGACCGGCATACAGTAATGGACAGGGGTGTTGGAGTCACAATTGGCCGGAGGGCAGTTTCTTCTATTACAGATAGCTTAAAGGTCAAGGAAATTGAAGGCGAGCCACTTCTAGATGCAAATTCATTGAAAGCCTTAATTAGGCTTCTACGATTAGCACAGCCCCTTGGTAAGGGACTCTTGCAGAGGCTCTTCTTAATCCTTTGTACACACAGTGTTACAAGAGCAATTTTAGTGCGTCTTTTGCTCGATATGATCAAGCCTGAGGCTGAAGGCTCAGTCAGCGGATTAGCTACTATTAATTCCCAAAGGCTTTATGGTTGCCACTCAAATGTTGTGTATGGCAGATCTCAGTTGTTAGATGGTCTTCCTCCCTTGGTGTTGCGTCGGATACTTGAGATCTTGACTTATTTAGCTACAAATCATTCTGCAGTGGCAAATATGTTATTCTACTTTGATTTCTCAGGTGTTCCTCAGTCTTTAAGTCCCTTAAATATGGATACCAAGAAGGACAAAGGCAAAGAGAAAATCGGAGAAGGAGGATTTTCATCTAATCCTGTCAACACCCAGGATGGGGATGTTCCCCTGATATTGTTTCTGAAGCTCCTTAATCGACCTCATTTCTTGCGTAGCACTGCTCATCTTGAGCAGGTCATGGACCTGCTTCAGGTGGTTGTTGATAATTCAGCTTCAAAATTAGAGGTCCATTCTCCCTCTGAAAGGGTCGATGGGAATTCCCAAAATCTATCTATAAGTGAAACTTCTGGAGATGGTCAGAACGGTCGTCCTGTGGAACCAGAATCTCAGCAAGAGGTTAAACCTGATGGTGTTGGATCATCAACTTCAGATGCAAACAAAAGTACAGATACCCATAGTATTTTCTTGAAGCTGCCAGAATCCGATTTGCATAATCTTTGCAGTCTTCTTGGTCGTGAGGGGCTTTCAGATAAAGTTTATATGCTTTCCAGTGAGGTGCTGAAGAAGTTGGCCTCAGTTGCAGTGACCCATCGAAAGTTCTTTATCTCAGAGCTTTCAGAATTAGCTCATGGTTTGAGTGCCTCAGCTGTCAGCGAGCTTGTCACTCTCCGGAATACACAGATGTTGGGTTTGAGTGCTGGTTCTATGGCTGGGTCGGCAATCTTACGAGTATTGCAATCACTTTGCTCACTCACTTCACCTGGTACAAATGAGAATTCAGTTTTGGAGAATGATGCAGAGCAGGAGGAGCATGCCACCATGTGGAAGCTAAATATTGCACTTGAGCCATTGTGGCAAGAATTGAGTGACTGTATAAGTGCCACTGAAACACAGTTGGGCCAGAGCTCTTTTTGTCCAACCATGTCCACTATAAATATTGGGGACCATGTACAAGGTTCCTCTTCTTCATCTCCTCTTCCTCCTGGAACCCAGAGACTGCTTCCTTTTATGGAGGCATTTTTTGTATTGTGTCAAAAGCTACAAGCAAACCACTCTATTACGCTGCAAGATCAAGCTAATGTGACTGCAAGAGAAGTCAAAGAGTCGGCTGGAAATTCAGATCCTTCAGGTACTAAGTTTTATAGCTGTGGGGATTCTCAGAGGAAGCTTGATGGTGCTGTCACATTTACAAGGTTTGCAGAGAAGCATCGCCGTCTTTTGAATGCATTTATCAGACAGAATCCAGGGCTGTTGGAGAAATCCCTTACTATGATGTTGAAGGCACCACGGTTAATTGATTTTGATAACAAGAGAGCATATTTCCGGTCAAGAATTAGGCAACAGCATGAGCAACATCTCTCCGGTCCACTGCGAATAAGTGTTCGTCGTGCTTATGTTTTGGAAGATTCTTACAATCAGTTGAGAATGCGTCCTAATCAGGACATGAAGGGACGATTAAATGTCCAATTCCAAGGGGAAGAGGGTATTGATGCTGGTGGTCTAACGCGAGAATGGTATCAATTACTATCAAGGGTTATATTTGACAAAGGTGCATTGCTTTTCACTACTGTCGGAAACAATGCAACTTTCCAGCCAAACCCTAATTCTGTATACCAGACGGAACATCTTTCTTACTTTAAATTTGTGGGCCGCGTGGTTGCAAAGGCAGTATTTGATGGGCAACTTTTGGATGTTTATTTCACTCGATCCTTCTACAAGCACATACTTGGTGTAAAGGTGACATACCATGATATAGAAGCCGTGGATCCTGATTACTACAAGAATTTGAAATGGATGTTAGAGAATGATGTGAGTGATATTCCTGACCTGACGTTTAGCATGGATGCGGATGAAGAAAAGCATATTCTTTATGAGAAAAACCAGGTGACTGATTATGAGCTTAAACCTGGAGGACGAAATATCAGGGTTACGGAAGAAACTAAGCACGAGTATGTAGACCTTGTAGCTGATCATATTTTGACAAATGCTATTCGTCCACAAATTAATTCTTTCTTGGAGGGGTTCAATGAATTGGTTCCACGAGAGCTTATCTCGATTTTTAATGATAAAGAGCTTGAGCTACTTATCAGTGGTCTTCCGGAGATTGATTTGGATGACTTGAAGGCAAACACCGAGTACACTGGCTATACAGCAGCATCTAGTGTTGTACAATGGTTTTGGGAGGTGGTTAAATGTTTCAACAAGGAGGACATGGCAAGACTGCTTCAATTTGTAACTGGCACATCAAAGGTTCCATTGGAAGGTTTCAAGGCTTTGCAAGGCATCTCTGGTCCTCAGAGGTTTCAGATTCACAAGGCATATGGAGCTCCTGACAGGCTGCCCTCTGCTCATACATGCTTTAATCAACTAGACCTTCCTGAGTATACCTCTAAGGATCAGCTTCATGAACGGTTGATGCTTGCTATTCATGAAGGGAGTGAAGGATTTGGCTTTGGCTGA

Protein Analysis

3869

Amino Acids

424.32

Weight (kDa)

5.03

Isoelectric Point (pI)

46.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 212 - 288 3.7e-12 Domain of Unknown Function (DUF908)
DUF908 PF06012 333 - 488 2.2e-26 Domain of Unknown Function (DUF908)
DUF913 PF06025 549 - 917 6.5e-92 Domain of Unknown Function (DUF913)
UBA_7 PF22562 1425 - 1469 1.5e-13 UBA-like domain
UBA PF00627 1428 - 1461 9.6e-07 UBA/TS-N domain
UBM PF14377 2764 - 2791 2.2e-08 Ubiquitin binding region
UBM PF14377 2801 - 2830 1.6e-10 Ubiquitin binding region
UBM PF14377 2837 - 2868 2.1e-07 Ubiquitin binding region
HECT PF00632 3557 - 3867 6.8e-96 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 7032, 7319
AarI CACCTGC 2 cut(s) 7352, 7598
AasI GACNNNNNNGTC 1 cut(s) 7261
AatII GACGTC 1 cut(s) 7249
Acc16I TGCGCA 1 cut(s) 7667
Acc36I ACCTGC 8 cut(s) 583, 2108, 5513, 5809, 7352, 7598, 9370, 9399
Acc65I GGTACC 1 cut(s) 3776
AccB1I GGYRCC 4 cut(s) 3776, 5449, 7954, 10429
AccB7I CCANNNNNTGG 4 cut(s) 4377, 6757, 7574, 9969
AccBSI CCGCTC 1 cut(s) 8345
AccI GTMKAC 5 cut(s) 6022, 7219, 10758, 11103, 11531
AccII CGCG 3 cut(s) 660, 10654, 10800
AccIII TCCGGA 3 cut(s) 8446, 9816, 11245
AcoI YGGCCR 6 cut(s) 783, 4368, 5133, 7576, 7594, 8776
AcyI GRCGYC 1 cut(s) 7246
AdeI CACNNNGTG 3 cut(s) 5396, 8945, 9969
AfeI AGCGCT 1 cut(s) 4335
AflIII ACRYGT 4 cut(s) 4738, 4911, 7129, 7428
AhlI ACTAGT 3 cut(s) 1294, 3812, 6383
AjiI CACGTC 2 cut(s) 2454, 2645
AjuI GAANNNNNNNTTGG 6 cut(s) 873, 905, 9914, 9946, 10735, 10767
AleI CACNNNNGTG 1 cut(s) 1649
Alw21I GWGCWC 9 cut(s) 1816, 2305, 4891, 5206, 5416, 7615, 8485, 10055, 11476
Alw44I GTGCAC 2 cut(s) 1812, 5412
AlwNI CAGNNNCTG 7 cut(s) 293, 781, 1067, 1694, 3032, 6379, 10144
Ama87I CYCGRG 3 cut(s) 2823, 4428, 7377
Aor13HI TCCGGA 3 cut(s) 8446, 9816, 11245
Aor51HI AGCGCT 1 cut(s) 4335
ApaI GGGCCC 1 cut(s) 1387
ApaLI GTGCAC 2 cut(s) 1812, 5412
ArsI GACNNNNNNTTYG 2 cut(s) 1333, 1365
AseI ATTAAT 6 cut(s) 896, 2351, 3756, 6171, 9030, 11151
Asp700I GAANNNNTTC 5 cut(s) 283, 642, 814, 2961, 11181
Asp718I GGTACC 1 cut(s) 3776
AspLEI GCGC 6 cut(s) 50, 2358, 4336, 7668, 8012, 8398
AsuC2I CCSGG 4 cut(s) 4429, 4430, 7378, 7379
AsuII TTCGAA 2 cut(s) 1339, 6224
AvaI CYCGRG 3 cut(s) 2823, 4428, 7377
AxyI CCTNAGG 2 cut(s) 7860, 8994
BaeGI GKGCMC 4 cut(s) 1387, 1816, 4435, 5416
BaeI ACNNNNGTAYC 4 cut(s) 2307, 2340, 6978, 7011
BalI TGGCCA 2 cut(s) 4370, 7596
BamHI GGATCC 3 cut(s) 4399, 5467, 10912
BanI GGYRCC 4 cut(s) 3776, 5449, 7954, 10429
BanII GRGCYC 3 cut(s) 1387, 10055, 11476
BauI CACGAG 2 cut(s) 11093, 11187
Bbv12I GWGCWC 9 cut(s) 1816, 2305, 4891, 5206, 5416, 7615, 8485, 10055, 11476
BbvCI CCTCAGC 3 cut(s) 1509, 3147, 9790
BceAI ACGGC 9 cut(s) 142, 333, 389, 3921, 5120, 7213, 8200, 10344, 10892
BcgI CGANNNNNNTGC 8 cut(s) 215, 249, 7459, 7493, 8146, 8180, 8668, 8702
BciVI GTATCC 6 cut(s) 107, 4705, 5029, 7357, 9114, 9223
BclI TGATCA 8 cut(s) 3862, 5175, 5710, 6553, 7120, 7456, 8985, 11116
BcnI CCSGG 4 cut(s) 4429, 4430, 7378, 7379
BcuI ACTAGT 3 cut(s) 1294, 3812, 6383
BfmI CTRYAG 9 cut(s) 703, 773, 1742, 2720, 4494, 4812, 7527, 8121, 9159
BfoI RGCGCY 2 cut(s) 4337, 8013
BfuAI ACCTGC 8 cut(s) 583, 2108, 5513, 5809, 7352, 7598, 9370, 9399
BfuI GTATCC 6 cut(s) 107, 4705, 5029, 7357, 9114, 9223
BglI GCCNNNNNGGC 1 cut(s) 10000
BglII AGATCT 5 cut(s) 150, 3046, 6545, 9077, 9129
BlpI GCTNAGC 1 cut(s) 8016
BmcAI AGTACT 1 cut(s) 3313
BmeT110I CYCGRG 3 cut(s) 2823, 4428, 7377
BmgBI CACGTC 2 cut(s) 2454, 2645
BmrI ACTGGG 5 cut(s) 1107, 3026, 3218, 4457, 7324
BmuI ACTGGG 5 cut(s) 1107, 3026, 3218, 4457, 7324
BoxI GACNNNNGTC 2 cut(s) 1409, 2679
BplI GAGNNNNNCTC 4 cut(s) 11183, 11215, 11519, 11551
Bpu10I CCTNAGC 5 cut(s) 1509, 3147, 4337, 7632, 9790
Bpu1102I GCTNAGC 1 cut(s) 8016
Bpu14I TTCGAA 2 cut(s) 1339, 6224
BpuMI CCSGG 4 cut(s) 4429, 4430, 7378, 7379
BsaAI YACGTR 3 cut(s) 2375, 5417, 7132
BsaBI GATNNNNATC 4 cut(s) 519, 1617, 3523, 9277
BsaHI GRCGYC 1 cut(s) 7246
BsaI GGTCTC 1 cut(s) 253
BsaWI WCCGGW 8 cut(s) 1276, 1553, 5470, 8446, 9816, 10470, 10508, 11245
BsaXI ACNNNNNCTCC 4 cut(s) 7296, 7326, 7329, 7359
Bse118I RCCGGY 4 cut(s) 3354, 7013, 7578, 8736
Bse21I CCTNAGG 2 cut(s) 7860, 8994
Bse8I GATNNNNATC 4 cut(s) 519, 1617, 3523, 9277
BseAI TCCGGA 3 cut(s) 8446, 9816, 11245
BseJI GATNNNNATC 4 cut(s) 519, 1617, 3523, 9277
BseRI GAGGAG 7 cut(s) 1991, 2356, 3354, 4521, 8376, 9968, 10110
BseSI GKGCMC 4 cut(s) 1387, 1816, 4435, 5416
BseYI CCCAGC 3 cut(s) 3644, 5167, 9857
BsgI GTGCAG 7 cut(s) 670, 927, 3042, 4427, 4773, 7518, 7742
Bsh1236I CGCG 3 cut(s) 660, 10654, 10800
Bsh1285I CGRYCG 1 cut(s) 9514
BshNI GGYRCC 4 cut(s) 3776, 5449, 7954, 10429
BsiEI CGRYCG 1 cut(s) 9514
BsiHKAI GWGCWC 9 cut(s) 1816, 2305, 4891, 5206, 5416, 7615, 8485, 10055, 11476
BsiHKCI CYCGRG 3 cut(s) 2823, 4428, 7377
BsmI GAATGC 4 cut(s) 1197, 3631, 10375, 10578
Bso31I GGTCTC 1 cut(s) 253
BsoBI CYCGRG 3 cut(s) 2823, 4428, 7377
Bsp119I TTCGAA 2 cut(s) 1339, 6224
Bsp120I GGGCCC 1 cut(s) 1383
Bsp13I TCCGGA 3 cut(s) 8446, 9816, 11245
Bsp1407I TGTACA 4 cut(s) 5932, 8936, 10096, 11314
Bsp1720I GCTNAGC 1 cut(s) 8016
Bsp19I CCATGG 6 cut(s) 2490, 3204, 3772, 4371, 6528, 6756
BspEI TCCGGA 3 cut(s) 8446, 9816, 11245
BspFNI CGCG 3 cut(s) 660, 10654, 10800
BspHI TCATGA 4 cut(s) 2064, 3865, 11551, 11575
BspMAI CTGCAG 5 cut(s) 777, 1746, 2724, 4816, 9163
BspMI ACCTGC 8 cut(s) 583, 2108, 5513, 5809, 7352, 7598, 9370, 9399
BspQI GCTCTTC 4 cut(s) 303, 648, 6221, 8927
BspT104I TTCGAA 2 cut(s) 1339, 6224
BspT107I GGYRCC 4 cut(s) 3776, 5449, 7954, 10429
BspTNI GGTCTC 1 cut(s) 253
BsrBI CCGCTC 1 cut(s) 8345
BsrFI RCCGGY 4 cut(s) 3354, 7013, 7578, 8736
BsrGI TGTACA 4 cut(s) 5932, 8936, 10096, 11314
BssAI RCCGGY 4 cut(s) 3354, 7013, 7578, 8736
BssNAI GTATAC 3 cut(s) 6023, 10759, 11532
BssNI GRCGYC 1 cut(s) 7246
BssSI CACGAG 2 cut(s) 11093, 11187
Bst1107I GTATAC 3 cut(s) 6023, 10759, 11532
Bst2BI CACGAG 2 cut(s) 11093, 11187
BstACI GRCGYC 1 cut(s) 7246
BstAPI GCANNNNNTGC 3 cut(s) 153, 3029, 5356
BstAUI TGTACA 4 cut(s) 5932, 8936, 10096, 11314
BstBAI YACGTR 3 cut(s) 2375, 5417, 7132
BstBI TTCGAA 2 cut(s) 1339, 6224
BstDSI CCRYGG 9 cut(s) 405, 2490, 3204, 3772, 4371, 6528, 6756, 10433, 10908
BstEII GGTNACC 1 cut(s) 7481
BstENI CCTNNNNNAGG 6 cut(s) 7188, 7605, 8869, 8900, 9395, 9448
BstFNI CGCG 3 cut(s) 660, 10654, 10800
BstH2I RGCGCY 2 cut(s) 4337, 8013
BstHHI GCGC 6 cut(s) 50, 2358, 4336, 7668, 8012, 8398
BstMCI CGRYCG 1 cut(s) 9514
BstPAI GACNNNNGTC 2 cut(s) 1409, 2679
BstPI GGTNACC 1 cut(s) 7481
BstSFI CTRYAG 9 cut(s) 703, 773, 1742, 2720, 4494, 4812, 7527, 8121, 9159
BstSLI GKGCMC 4 cut(s) 1387, 1816, 4435, 5416
BstUI CGCG 3 cut(s) 660, 10654, 10800
BstZ17I GTATAC 3 cut(s) 6023, 10759, 11532
Bsu36I CCTNAGG 2 cut(s) 7860, 8994
BsuI GTATCC 6 cut(s) 107, 4705, 5029, 7357, 9114, 9223
BtgI CCRYGG 9 cut(s) 405, 2490, 3204, 3772, 4371, 6528, 6756, 10433, 10908
BtgZI GCGATG 2 cut(s) 1260, 10340
BtrI CACGTC 2 cut(s) 2454, 2645
BveI ACCTGC 8 cut(s) 583, 2108, 5513, 5809, 7352, 7598, 9370, 9399
CaiI CAGNNNCTG 7 cut(s) 293, 781, 1067, 1694, 3032, 6379, 10144
CciI TCATGA 4 cut(s) 2064, 3865, 11551, 11575
CfoI GCGC 6 cut(s) 50, 2358, 4336, 7668, 8012, 8398
Cfr10I RCCGGY 4 cut(s) 3354, 7013, 7578, 8736
Cfr9I CCCGGG 2 cut(s) 4428, 7377
CseI GACGC 4 cut(s) 433, 8957, 9104, 10565
CsiI ACCWGGT 3 cut(s) 6316, 9907, 11028
CspCI CAANNNNNGTGG 4 cut(s) 124, 159, 5829, 5864
DraI TTTAAA 5 cut(s) 483, 2014, 2409, 6499, 10786
DraIII CACNNNGTG 3 cut(s) 5396, 8945, 9969
DrdI GACNNNNNNGTC 1 cut(s) 7261
DseDI GACNNNNNNGTC 1 cut(s) 7261
EaeI YGGCCR 6 cut(s) 783, 4368, 5133, 7576, 7594, 8776
Ecl136II GAGCTC 2 cut(s) 10053, 11474
Eco147I AGGCCT 2 cut(s) 7324, 7858
Eco24I GRGCYC 3 cut(s) 1387, 10055, 11476
Eco31I GGTCTC 1 cut(s) 253
Eco32I GATATC 2 cut(s) 4822, 7849
Eco47III AGCGCT 1 cut(s) 4335
Eco53kI GAGCTC 2 cut(s) 10053, 11474
Eco81I CCTNAGG 2 cut(s) 7860, 8994
Eco88I CYCGRG 3 cut(s) 2823, 4428, 7377
Eco91I GGTNACC 1 cut(s) 7481
EcoICRI GAGCTC 2 cut(s) 10053, 11474
EcoNI CCTNNNNNAGG 6 cut(s) 7188, 7605, 8869, 8900, 9395, 9448
EcoO109I RGGNCCY 1 cut(s) 6005
EcoO65I GGTNACC 1 cut(s) 7481
EcoRI GAATTC 4 cut(s) 1341, 7711, 9463, 9922
EcoRV GATATC 2 cut(s) 4822, 7849
EcoT22I ATGCAT 6 cut(s) 6, 2006, 2189, 2257, 4188, 10375
EcoT38I GRGCYC 3 cut(s) 1387, 10055, 11476
FauI CCCGC 1 cut(s) 7512
FauNDI CATATG 3 cut(s) 712, 7453, 11467
FbaI TGATCA 8 cut(s) 3862, 5175, 5710, 6553, 7120, 7456, 8985, 11116
FblI GTMKAC 5 cut(s) 6022, 7219, 10758, 11103, 11531
FriOI GRGCYC 3 cut(s) 1387, 10055, 11476
FspI TGCGCA 1 cut(s) 7667
GlaI GCGC 6 cut(s) 49, 2357, 4335, 7667, 8011, 8397
GsaI CCCAGC 3 cut(s) 3648, 5171, 9861
HaeII RGCGCY 2 cut(s) 4337, 8013
HgaI GACGC 4 cut(s) 433, 8957, 9104, 10565
HhaI GCGC 6 cut(s) 50, 2358, 4336, 7668, 8012, 8398
Hin1I GRCGYC 1 cut(s) 7246
Hin6I GCGC 6 cut(s) 48, 2356, 4334, 7666, 8010, 8396
HinP1I GCGC 6 cut(s) 48, 2356, 4334, 7666, 8010, 8396
HincII GTYRAC 8 cut(s) 1184, 2457, 3547, 4486, 7684, 8047, 8521, 9292
HindII GTYRAC 8 cut(s) 1184, 2457, 3547, 4486, 7684, 8047, 8521, 9292
HindIII AAGCTT 4 cut(s) 1665, 4685, 6111, 10313
Hpy99I CGWCG 7 cut(s) 1896, 3309, 3735, 7248, 7251, 9120, 10536
HpyCH4IV ACGT 9 cut(s) 2374, 2453, 2644, 3490, 3733, 5416, 7131, 7246, 10979
HpySE526I ACGT 9 cut(s) 2374, 2453, 2644, 3490, 3733, 5416, 7131, 7246, 10979
Hsp92I GRCGYC 1 cut(s) 7246
HspAI GCGC 6 cut(s) 48, 2356, 4334, 7666, 8010, 8396
Kpn2I TCCGGA 3 cut(s) 8446, 9816, 11245
KpnI GGTACC 1 cut(s) 3780
KroI GCCGGC 1 cut(s) 3354
KroNI GCCGGC 1 cut(s) 3356
Ksp22I TGATCA 8 cut(s) 3862, 5175, 5710, 6553, 7120, 7456, 8985, 11116
LguI GCTCTTC 4 cut(s) 303, 648, 6221, 8927
MabI ACCWGGT 3 cut(s) 6316, 9907, 11028
MaeII ACGT 9 cut(s) 2374, 2453, 2644, 3490, 3733, 5416, 7131, 7246, 10979
MbiI CCGCTC 1 cut(s) 8345
MfeI CAATTG 4 cut(s) 4035, 7661, 8301, 8772
MlsI TGGCCA 2 cut(s) 4370, 7596
MluNI TGGCCA 2 cut(s) 4370, 7596
MmeI TCCRAC 9 cut(s) 59, 402, 5490, 8743, 9098, 9541, 10088, 10380, 10699
Mox20I TGGCCA 2 cut(s) 4370, 7596
Mph1103I ATGCAT 6 cut(s) 6, 2006, 2189, 2257, 4188, 10375
MroI TCCGGA 3 cut(s) 8446, 9816, 11245
MroNI GCCGGC 1 cut(s) 3354
MroXI GAANNNNTTC 5 cut(s) 283, 642, 814, 2961, 11181
MscI TGGCCA 2 cut(s) 4370, 7596
Msp20I TGGCCA 2 cut(s) 4370, 7596
MspA1I CMGCKG 8 cut(s) 1691, 1747, 3644, 5197, 5716, 6572, 9015, 9794
MunI CAATTG 4 cut(s) 4035, 7661, 8301, 8772
Mva1269I GAATGC 4 cut(s) 1197, 3631, 10375, 10578
MvnI CGCG 3 cut(s) 660, 10654, 10800
NaeI GCCGGC 1 cut(s) 3356
NciI CCSGG 4 cut(s) 4429, 4430, 7378, 7379
NcoI CCATGG 6 cut(s) 2490, 3204, 3772, 4371, 6528, 6756
NdeI CATATG 3 cut(s) 712, 7453, 11467
NgoMIV GCCGGC 1 cut(s) 3354
NmeAIII GCCGAG 2 cut(s) 262, 3295
NsbI TGCGCA 1 cut(s) 7667
NsiI ATGCAT 6 cut(s) 6, 2006, 2189, 2257, 4188, 10375
NspV TTCGAA 2 cut(s) 1339, 6224
OliI CACNNNNGTG 1 cut(s) 1649
PaeI GCATGC 2 cut(s) 1855, 9962
PagI TCATGA 4 cut(s) 2064, 3865, 11551, 11575
PaqCI CACCTGC 2 cut(s) 7352, 7598
PceI AGGCCT 2 cut(s) 7324, 7858
PciI ACATGT 3 cut(s) 4738, 4911, 7428
PciSI GCTCTTC 4 cut(s) 303, 648, 6221, 8927
PctI GAATGC 4 cut(s) 1197, 3631, 10375, 10578
PdiI GCCGGC 1 cut(s) 3356
PdmI GAANNNNTTC 5 cut(s) 283, 642, 814, 2961, 11181
PflFI GACNNNGTC 1 cut(s) 7248
PflMI CCANNNNNTGG 4 cut(s) 4377, 6757, 7574, 9969
PfoI TCCNGGA 3 cut(s) 4150, 6007, 10129
Ppu21I YACGTR 3 cut(s) 2375, 5417, 7132
PpuMI RGGWCCY 1 cut(s) 6005
PscI ACATGT 3 cut(s) 4738, 4911, 7428
PshAI GACNNNNGTC 2 cut(s) 1409, 2679
PshBI ATTAAT 6 cut(s) 896, 2351, 3756, 6171, 9030, 11151
PsiI TTATAA 2 cut(s) 7032, 7319
Psp124BI GAGCTC 2 cut(s) 10055, 11476
Psp5II RGGWCCY 1 cut(s) 6005
PspEI GGTNACC 1 cut(s) 7481
PspFI CCCAGC 3 cut(s) 3644, 5167, 9857
PspOMI GGGCCC 1 cut(s) 1383
PspPPI RGGWCCY 1 cut(s) 6005
PsrI GAACNNNNNNTAC 2 cut(s) 5880, 5912
PstI CTGCAG 5 cut(s) 777, 1746, 2724, 4816, 9163
PstNI CAGNNNCTG 7 cut(s) 293, 781, 1067, 1694, 3032, 6379, 10144
PsyI GACNNNGTC 1 cut(s) 7248
PvuII CAGCTG 7 cut(s) 1691, 1747, 3644, 5197, 5716, 6572, 9794
SacI GAGCTC 2 cut(s) 10055, 11476
SapI GCTCTTC 4 cut(s) 303, 648, 6221, 8927
ScaI AGTACT 1 cut(s) 3313
SexAI ACCWGGT 3 cut(s) 6316, 9907, 11028
SfcI CTRYAG 9 cut(s) 703, 773, 1742, 2720, 4494, 4812, 7527, 8121, 9159
SfuI TTCGAA 2 cut(s) 1339, 6224
SmaI CCCGGG 2 cut(s) 4430, 7379
SpeI ACTAGT 3 cut(s) 1294, 3812, 6383
SphI GCATGC 2 cut(s) 1855, 9962
SrfI GCCCGGGC 1 cut(s) 4430
SseBI AGGCCT 2 cut(s) 7324, 7858
SspI AATATT 4 cut(s) 5082, 6494, 9982, 10084
SstI GAGCTC 2 cut(s) 10055, 11476
StuI AGGCCT 2 cut(s) 7324, 7858
TaiI ACGT 9 cut(s) 2377, 2456, 2647, 3493, 3736, 5419, 7134, 7249, 10982
TauI GCSGC 5 cut(s) 788, 2057, 6969, 8438, 10800
TspGWI ACGGA 5 cut(s) 1459, 3473, 5612, 10781, 11093
TspMI CCCGGG 2 cut(s) 4428, 7377
Tth111I GACNNNGTC 1 cut(s) 7248
Van91I CCANNNNNTGG 4 cut(s) 4377, 6757, 7574, 9969
VneI GTGCAC 2 cut(s) 1812, 5412
VspI ATTAAT 6 cut(s) 896, 2351, 3756, 6171, 9030, 11151
XagI CCTNNNNNAGG 6 cut(s) 7188, 7605, 8869, 8900, 9395, 9448
XbaI TCTAGA 2 cut(s) 2200, 8842
XcmI CCANNNNNNNNNTGG 3 cut(s) 4300, 5393, 9044
XmaI CCCGGG 2 cut(s) 4428, 7377
XmiI GTMKAC 5 cut(s) 6022, 7219, 10758, 11103, 11531
XmnI GAANNNNTTC 5 cut(s) 283, 642, 814, 2961, 11181
ZraI GACGTC 1 cut(s) 7247
ZrmI AGTACT 1 cut(s) 3313
Zsp2I ATGCAT 6 cut(s) 6, 2006, 2189, 2257, 4188, 10375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.