Rh5BG526500

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0007872
Physical Location & Seq
Reverse (-)
82960918 .. 82976835
15918 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG526500.1

Sequence Viewer

Length: 11247 bp
ATGAAGTTGAAGAGAAGGAGGGCCGTGGAAGTGCCTCCGAAAATTAGATCCTTCATCAACAGCGTCACTGCTGTTCCACTTGAGAATATAGAGGAACCTTTAAAAGGTTTTGTCTGGGAGTACGATAAGGGAGATTTCCATCATTGGGTTGATCTGTTCAACCATTTTGATTCATTTTTTGAGAAGCATATAAAATCTAGGAAGGACTTGCAGGTTGAGGATAATTTTCTCGACTCTGATCCTCCTTTTCCAAGAGAAGCTCTTCTTCAAGTTCTCCGCGTGATAAGAATAATTTTGGAGAACTGCACAAATAAACACTTCTACAGTTCATATGAGCAGCATCTCTCATCTTTGCTTGCTTGCACCGATGCGGATGTGGTTGAGGCTTGCCTGCAGACTCTGGCCGCATTTTTGAAGAAAACAGTAGGAAAGTATTCCATCAGAGATGCTTCACTAAATTCAAAGTTGTTTGCTCTTGCACAAGGTTGGGGAGGAAAGGAAGAGGGTCTTGGATTAATTGCCTGTGCAGTACAGGATGGTTGTGACCCTATTGCTTATGAGTTAGGATGCACCCTTCACTTTGAGTTTTATGCGTTGAAAGATGCAAGTGAATTACCAACCACAGAACAGCAGACCCAAGGTTTACAAATCATTCATTTACCTAACATCAACACTCATCCAGAGACTGATCTTGAGCTTTTGAGTAAGCTAATTGCCGAATACAAAGTACCCAGTAGTTTGAGATTTGCTTTATTGACAAGATTGCGTTTTGCAAGGGCTTTTGGCTCTTTAGCTACTCGTCAACAGTATGCCTGCATTCGTCTGTATGCCTTCATAGTTCTTGTTCAAGCAAATAGTGATGGCGATGACCTTGTTTCTTTCTTCAACACTGAACCGGAGTTTGTCAATGAACTAGTGTCATTATTGAGCTTGGAAGATGTAGTTCCTGAGAAAATTCGAATTCTATGTCTTCTTTCATTGGTTGCTCTTTCTCAAGATCGGGCCCGACAGCCTAATGTTTTGACTGCTGTCACATCTGGTGGGCATCGTGGAATCCTATCCAGCCTCATGCAGAAGGCCATTGATTCCGTCATCAGTGATACATCAAAGTGGTCTGTTGTTTTTGCTGAGGCTCTGTTATCTCTTGTTACAGTTTTGGTTTCATCATCATCCGGTTGTTCAGCCATGCGTGAAGCTGGATTTATCCCCACCCTTCTCCCTTTGCTTAAAGATACAAATCCACAGCACCTACATTTGGTCAGCACATCTGTGCATATTTTAGAAGCTTTTATGGATTACAGTAATCCAGCTGCTGCATTGTTCAGGGACTTGGGTGGTTTAGATGATACCATCTCTCGCCTGCAGCTGGAAGTGTCTCATGTAGAAAATGGGCCAAAACAACAAGATGAAGATTCTAGTACCTCTGGAAGTGCACAAGTAGTTGCAGGAACTTCCACTGAGATAGACAGCATGCAACCTCTGTATTCAGAACCTCTTGTTTCATATCATCGACGACTTCTGATGAAAGCTCTACTGCGTGCTATATCTCTGGGGACTTATGCACCTGGAAATACTGCCCGTGTTTATGGCTCGGAGGAGAGCCTATTGCCGCAATGCTTATGCATAATCTTTAAAAGGGCAAAAGATTTTGGTGGTGGGGTGTTTTCACTTGCGGCTTCTGTCATGAGTGATTTAATTCACAAAGATCCTACCTGTTTTCCAGTTTTAGATGAAGCAGGTCTTCCTTCTACCTTTCTGGATGCTATAATGGATGGCGTTCTTTGCTCAACAGAGGCCATTACATGCATCCCACAGTGTCTGGATGCCCTGTGTCTAAATAATAATGGTCTTCAGGCTGTGAAAGATCGCAATGCATTGAGGTGCTTTGTGAAGATATTTACTTCAAGAACCTATCTGCGTGCTCTAACAAGTGATACACCTGTCTCCCTATCTAGTGGATTGGATGAATTAATGCGCCATGCCTCCTCATTACGTGGTCCTGGTGTGGATATGCTAATTGAGATTTTAAATGCCATCTCAAAAATTGGACATGGGGGTGATTCTTCTCTCATGTCAACCGAACTTTTATCTTCTTCTACTCCTGTTCCCATGGAAACTGATGGAGAAGAAAGGAATGTAGTCATGTCAGATGATAGGGAGTCATCCAAGATGGATAGTTCAGAGCAGGGAACTGAAACATCTTCTGATTCTTTAGTGGGAAATGCTGAAGTATTGCTTCCTGATTGTGTGAGCAATGTTGCACGTCTTCTTGAAACTATACTTCAGAATGGTGACACTTGTCGTATATTTGTGGAGAAGAAGGGAATAGAAGCTGTCCTGCAGTTGTTTACCTTGCCTTTAATGCCTCTTTCTGTTTCAGTTGGTCAGAGTATATCTATTGCATTTAAAAACTTCTCACCACAACATTCTGCTTCTTTGGCTCGGGCGGTATGTTCATTTTTGAGAGAGCATCTGAAATCAACAAATGAACTCTTAGTTTCAGTTGGTGGGACTCAACTTTCTTTGGTGGAATCTGCAAAGCAAACTAAGGTTTTGAAGCATCTTTCCAGTCTTGAAGCTATTCTGTCTCTGTCTAATGTTCTATTGAAAGGGACGGCTACTGTGGTGTCTGAACTGGGTGCAGCAGATGCTGATGTATTGAAAGATCTTGGGAGTACATACAAGGAAATCCTTTGGCAAATCTCTCTGTGTAATGATGTCAAGTCTGATGAGAAGATCAATGCTGAACAAGAACAAGACATTGCTGAGGCAGCTCCATCTAATGCTTCGGGAAGGGAGAGTGATGATGATGCTAATACTCCCATGGTGAGATACATGAACCCAGTTTCTATTAGGAATCAGCCCTTTTGGGGTGGAGAGCGTGAGTTCCTTTCAGTTGTTCGCAGTGGTGAAGGTTTGCACCGTCGTAGTACTCGGCATGGGATTACACGCATGAGAGGAGGAAGGACAGGCCGGCATTTGGAGGCTTTACATATTGATTCTGAATCTTCTTCCACAGTATCGGAGGCAACTACATCCCAGGATTTGAAAAAGAAAAGTCCTGATGTGCTTGTTACAGAAATTCTTAACAAGCTCGCTTCCACTCTACGTTCCTTCTTCACAGCTCTTGTCAAGGGATTCACATCACCAAATAGGCGTAGAGTTGACTCTGGATCATTGAGTTTGGCCTCAAAAACTCTTGGAACTGCCCTAGCTAAAGTTTATCTTGAGGCTCTTGGTTTCCCTAGGCATTCTACTTCAGCTGGGCTTGATACTTCATTATCAGTCAAGTGTCGATACCTTGGAAAAGTTGTGGATGATATGATGGCACTTACATTTGATAGCAGACGACGTACTTGTTATACTGCAACAATTAATAATTTCTATGTCCATGGTACCTTTAAGGAGCTGCTCACAACGTTTGAAGCTACTAGTCAGTTGTTATGGACCCTACCATATTGTATGCCAACATCAGGCATTGATCATGAAAAGACAGGTGAAGGCAGTAAACTGTCCCATAGTTCGTGGCTGCTTGAGACTCTACAAAGCTATTGCCGTGTGCTGGAGTATTTTGTTAATTCTTCTTTACTCTTATCTACAACCTCTGCATCCCAGGCACAGTTGCTTGTTCAGCCAGTTGCAGTTGGTCTATCAATTGGGCTTTTCCCTGTGCCAAGGGAACCAGAAGTTTTTGTTCGTATGCTTCAGTCTCAAGTTCTTGATGTAATACTTCCTATCTGGAACCACCCCATGTTTCCTAGTTGTAGTCCAGGATTCGTTGCTTCCATTGTTTCACTTGTTATGCATGTATATTCTGGTGTGGGAGATGTGAAGCAGAATCGCAGTGGCATTGCTGGAACTGCAAACCAAAGATTCATGCCTCCACCACTTGATGAAGCTACTATTACTACCATTATGGAGATGGGTTTTTCAAGGGGCAGAGCAGAAGAAGCGCTTAGGAGGGTGGAAACAAATAGCGTTGAAATGGCCATGGAGTGGCTTTGCAGCCATGCTGAGGATCCTGTGCAGGAGGATGATGAACTGGCCCGGGCGCTTGCTCTATCACTGGGAAATTCATCTGAAACATCTAAAGCTGATAATGTTGACAAGTCTGTAGATGTGCTGGCAGAAGAGAGTTGTGTGAAAGCTCCTCCAGTTGATGATATTCTTGCTGCATCAGTTAAGTTGTTTCAGAGCAGTGACACAATGGCCTTCCCATTGACAGATTTGCTTGTGACACTTAGCAATCGGAACAAAGGTGAAGACCGTCCTAAAGTTGCATCTTATCTAATTCAGCAGCTCAAGCTTTGTCCATTGGATTTTTCTAAGGATACCAGTTCTTTGAGTATGTTATCACATGTTATAGCATTGCTGCTTTCTGAGGATGGAAGTACAAGGGAAATTGCTGCACAGAATGGTATTGTGTCTGCTGCAGTAGATATCTTAATGAATTTTAAGGCCAAAGACGAGTCAGGCAATGAACTTCTTGTTCCAAAATGTATTAGTGCTCTACTGCTTATTTTGGATAACATGTTGCAATCAAGGCCCAGAATTTCTGAGAACATTGAAGAGACTCAGACAGGATCTCTGTCTGAACTATCTGGAGATCGTACTTCCTTGTCAATCCCTGATGCAGTTACAGAGAAAAAACAGGATACGGATGCCCAGGAAAAAGATAGTGGCACTGGATTTGAGAAAATATTGGGCAAATCAACTGGTTATTTGACTATGGAAGAGAGTCAAAAGGTTCTGGCCGTTGCCTGTGATTTGATAAAGCAGCATGTCCCAGCTATGATCATGCAGGCTGTTTTACAGCTGTGTGCTCGTTTGACGAAAACTCATGCTCTTGCTTTGCAGTTTCTTGAACATGGAGGATTAGCGGCTCTTTTTGGGCTTCCCAGAAGTTGTTTTTTCCCTGGATATGACACTGTTGCATCTGCTATTGTTCGCCATCTCCTTGAAGATCCGCAAACACTGCAAACAGCAATGGAATTGGAAATTCGCCAAACACTGAGTGGCAACAGGCATGGTGCACGTACTTCTGCAAGGACATTTTTGACATCAATGGCACCTGTAATCTCTAGAGATCCGGTTGTTTTTATGAAAGCTGCTGCTGCTGTTTGTCAGTTGGAGACATCAGCAGGTAGGACATTCATTGTCTTAATGAAGGAAAAAGAAAAGGAAAAGGACAAACCTAAAGCATCTGGTGGTGAGGTTGGATTATCTTCCAATGAATCTATCCGTATTCCTGAAAATAAAGTACATGATGGATCAGGTAAATGCTTGAAAGGTCACAAGAAGATCCCTGCTAATCTTACTCAAGTGATTGATCAGCTGCTTGAAATTGTTTTGAAATACTATTTTCCAAAGAGCCAGGAAGATTGTCAGAATAACCTGTCTTCTATGGAGGTAGATGAACCTGCTACCAAGGTAAAGGGTAAATCAAAGGTTGATGAGACAAGGAAAGTGGAGTCTGAATCTGAAAGATCCGCAGGGCTGGCGAAGGTAACATTTGTTCTCAAGTTACTGAGTGATATTCTTCTCATGTATGTACATGCAGTTGGTGTTATACTTAAACGGGATTTGGAATTGGCTCAATTACGGGTAGCTAATCAACTGGAAGGTCCTGGACATGGTGGTATACTTCATCATGTGATTCATCGATTGCTTCCACTCACCATTGATAAATCTGCTGGACCTGATGAATGGAGAGACAAGTTATCTGAAAAAGCTTCTTGGTTCCTGGTAGTTCTGTGTGGTCGTTCTGGTGAAGGGCGTAGAAGAGTAATTAATGAGCTTGTGAAAGCATTATCATCATTTTCAAACATTGATGGTAATTCTTTGAAGAGCATCTTATTGCCAGATAAAAAGGTTTATGCTTTTGTGGATTTGGTGTACTCTATTTTGTCTAAAAATTCATCATCAAGCAACTTACCTGGTACGGGGTTTTCACCTGACATAGCAAAAAGCATGATAGATGGGGGAATGATTCAGTGTCTGACTAGTATTCTCCAGGTGATTGATTTGGACCATCCTGATGCTCCCAAAACTGTGAATCTCATACTCAAGGCTTTAGAAAGTCTAACCAGGGCTGCTAATGCTAGTGAGCAATATTTTAAATCTGATGAGACAAACAAGAAAAAGTCCTTGGTGTTAAATAGAGGATCTGATGATCAGGTAACTACTCCAGCTGATGATACATTGGGGCATAATCAGAATACAAGCAGTGAGCAGGATGTCAGAGATGCAGTACCAACTGAACAACAGGATCAAGGAACTTCTCAAAGTGAAGGTAATCCAGATGCAACTCCGAACCAGTCAGGGGAACATGATATGAGAATTGAAGTTGAAGGACCATTGGCTTCTAACCAACCCATGGAGCTTGGGATGGATTTTATGCGTGAAGAGATGGAAGAAGGCAATGTGTTACACAACAATGACCAAATTGAAATGGCTTTTCGTGTTGAAGGTAGGGCAGATGATGACATGGGTGATGAAGATGATGACATGGGTGATGATGGTGAGGATGATGAGGATGATGATGATGGAGAGGATGAGGATGAGGATATAGCAGAAGATGGTGGCGGCATGATGTCTTTGGCTGATACTGATGTGGAGGACCATGATGATACTGGCCTGGGAGATGATTATAATGATGAGATGATTGATGAAGATGATGATGATTTCCATGAGAATCGTGTCATAGAAGTGAGATGGAGGGAAGCCCTTGACGGGCTTGATCATTTACACGTACTTGGGCAACCTGGAGCTGCAAGTGGTCTGATTGATGTTGCTGCCGAACCTTTTGAAGGGGTTAATGTGGATGACCTTTTTGGTCTACGAAGGCCGTTAGGTTTTGATCGACGTCGTCAGACGAGTAGGTCTTCCTTTGAGCGATCTGTTACAGAAGCAAATGGCTTTCAACATCCTCTCCTTATAAGGCCTCCCCAGTCTGGAGATTTGGTATCCATGTGGTCAGCAGGTGGAAATTCATCCCGGGACTTAGAAGCTCTATCATCAGGGAGCTTTGATGTAGCTCATTTCTACATGTTTGATGCTCCTGTTCTTCCATATGATCATGTTCCAAGCAATCTTTTCGGTGACCGTTTGGGTGGTGCAGCCCCGCCACCATTGACTGATTATTCTGTAGGTATGGATTCATTGCAGTTATCGGGACGAAGAGGCCCAGGTGATGGCCGGTGGACTGATGATGGCCAGCCTCAAGCAGGTGCTCATGCTGCTGCTATTGCTCAGGCAGTTGAGGAACAGTTTATATCCCAATTGCGCAGTCTTGCTCCTGTTGACACCCCTGTTGAACCACATTCTCAGAATTCAGGAGTGCAGGAGAAACAGCCAGATGTGCCTCCTTCAACTGATGGTCAAGTAGAAGTAGATCGTGGTAACACCACCAGCCAACAAGTTGAAGATCAGCACCAAGACAGGGGTGTTGAGGTGACACATCAAGATATCTCCAGGCCTGAGGGTATTCCTCGCCAAGAACAAGTCAATCAAGAATCCTTTGTCGAAGATGCAGGGGGCTGTTTGCAGGAACCTGAACCAATGTCAATCCAGGCACCTTCTTTGGACAGTACACGAAATGATAACATGGACATTGCGGAGGGCAATGGCGCTGCTGAGCAAGAAGGGTCAATGCCGGAATTTGTCAACTCATCTGCAAGCACAAGGGTTGATTTACAACAGGAAGAGGGTTCTGAAGTGCCTTCTAATGTCCGTGATGCTACAGTAGAAGCTATGGGTCAGGATGGATCTTCAGGCAATCAAGTTGGTGACATGCCAGCAAATTTCGGCTTCAATGTGTCTAATTCAGATGAGCCGTCAAGCCAAAACACATTGGTTGCTCCAGAAGCTAATCAGGCTGAACAAGTTACTTTGAACAATGAGGCTCCTGGTGCTAATGCAATTGACCCTACATTCTTGGAGGCTTTACCTGAAGAGTTGAGAGCGGAGGTTCTTGCTTCACAGCAAGCTCAGTCAGTTCAACCTCCTCCTTATGCGCCACCTTCTGCGGACGACATTGATCCTGAGTTTTTAGCTGCCCTTCCTCCGGATATTCAAGCAGAAGTTTTGGCTCAACAAAGAGCACAAAGAGTTGCACAACAGGCTGAAGGACAACCTGTTGACATGGACAATGCTTCAATAATTGCTACTTTTCCTGCTGATTTACGGGAAGAGGTACTTTTAACTTCTTCAGAAGCAGTTTTGTCTGCATTGCCTTCTCCACTACTGGCTGAAGCTCAAATGCTAAGAGATCGAGCAATGAGTCATTATCAGGCTCGCAGCCTTTTCGGGAGCAGCCACAGGCTGAATAATAGGAGAAATGGATTGGGTTTTGACCGGCATACAGTAATGGACAGGGGTGTTGGAGTCACAATTGGCCGGAGGGCAGTTTCTTCTATTACAGATAGCTTAAAGGTCAAGGAAATTGAAGGCGAGCCACTTCTAGATGCAAATTCATTGAAAGCCTTAATTAGGCTTCTACGATTAGCACAGCCCCTTGGTAAAGGACTCTTGCAGAGGCTCTTCTTAATCCTTTGTACACACAGTGTTACAAGAGCAATTTTAGTGCGTCTTTTGCTCGATATGATCAAGCCTGAGGCTGAAGGTTCAGTCAGTGGATTAGCTACTATTAATTCCCAAAGGCTTTATGGTTGCCACTCAAATGTTGTATATGGCAGATCTCAGTTGTTAGATGGTCTTCCTCCCTTGGTGTTGCGTCGGATCCTTGAGATCTTGACTTATTTAGCTACAAATCATTCTGCAGTGGCAAATATGTTATTCTACTTTGATTTCTCAGGTGTTCCTCAGTCTTTAAGTCCCGTAAATATGGATACCAAGAAGGACAAAGGCAAAGAGAAAATCGGAGAAGGAGGATTTTCATCTAATCCTGTCAACACCCAGGATGGGGATGTTCCCCTGATATTGTTTCTGAAGCTCCTTAATCGACCTCATTTCTTGCGTAGCACTGCTCATCTTGAGCAGGTCATGGACCTGCTTCAGGTTGTTGTTGATAATTCAGCTTCAAAATTAGAGGTCCATTCCCCCTCTGAAAGGGTCGATGGGAATTCCCAAAATCTATCTATAAGTGAAACTTCTGGAGATGGTCAGAATGGTCGTCCTGTGGAACCAGAATCTCAGCAAGAGGTTAAACCTGATGGTGTTGGATCATCAACTTCAGATGCAAACAAAAGTACAGACACCCATGGTATTTTCTTGAAGCTGCCAGAATCCGATTTGCATAATCTTTGCAGTCTTCTTGGTCGTGAGGGGCTTTCAGATAAAGTTTATATGCTTTCCAGTGAGGTGCTGAAGAAGTTGGCCTCAGTTGCAGTGACCCATCGAAAGTTCTTTATCTCAGAGCTTTCAGAATTAGCTCATGGTTTGAGTGCCTCCGCTGTCAGCGAGCTTGTCACTCTCCGGAATACACAGATGTTGGGTTTGAGTGCTGGTTCTATGGCTGGGTCGGCAATCTTACGAGTATTGCAATCACTTTGCTCACTCACTTCACCTGGTACAAATGAGAATTCAGTTTTGGAGAATGATGCAGAGCAGGAGGAGCACGCCACCATGTGGAAGCTAAATATTGCACTTGAGCCATTGTGGCAAGAATTGAGTGACTGTATAAGTGCCACTGAAACACAGTTGGGCCAGAGCTCTTTTTGTCCAACCATGTCCACTATAAATATTGGGGACCATGTACAAGGTTCCTCTTCTTCATCTCCTCTTCCTCCTGGAACCCAGAGACTGCTTCCTTTTATGGAGGCATTTTTTGTGTTGTGTCAAAAGCTACAAGCAAACCACTCTATTACACTGCAAGATCAAGCTAATGTGACTGCAAGAGAAGTCAAAGAGTCTGCTGGAAATTCAGATCCTTCAGGTACTAAGTTTTATAGCTGTGGGGATTCTCAGAGGAAGCTTGATGGTGCTGTCACATTTACAAGGTTTGCGGAGAAGCATCGCCGTCTTTTGAATGCATTTATCAGACAGAATCCAGGGCTGTTGGAGAAATCCCTTACTATGATGTTGAAGGCACCACGGCTAATTGATTTTGATAACAAGAGAGCATATTTCCGGTCAAGAATTAGGCAACAGCATGAGCAACATCTCTCCGGTCCGCTGCGAATAAGTGTTCGTCGTGCTTATGTTTTGGAAGATTCTTACAATCAGTTGAGAATGCGTCCTAATCAGGACATGAAGGGACGATTAAATGTCCAATTCCAAGGGGAAGAGGGTATTGATGCTGGTGGTCTAACGCGAGAATGGTATCAATTACTATCAAGGGTTATATTTGACAAAGGTGCATTGCTTTTCACTACTGTTGGAAACAATGCAACTTTCCAGCCAAACCCTAATTCTGTATACCAGACGGAACATCTTTCTTACTTTAAATTTGTGGGCCGCGTGGTTGCAAAGGCAGTATTTGATGGGCAACTTTTGGATGTTTATTTCACTCGATCCTTCTACAAGCACATACTTGGTGTAAAGGTGACATACCATGATATAGAAGCCGTGGATCCTGATTACTACAAGAATTTGAAATGGATGTTAGAGAATGATGTGAGTGATATTCCTGACCTGACGTTTAGCATGGATGCGGATGAAGAAAAGCATATTCTTTATGAGAAAAACCAGGTGACTGATTATGAGCTTAAACCTGGAGGACGAAATATCAGAGTTACGGAAGAAACTAAGCACGAGTATGTAGACCTTGTAGCTGATCATATTTTGACAAATGCTATTCGTCCACAAATTAATTCTTTCTTGGAGGGCTTCAATGAATTGGTTCCACGTGAGCTTATCTCGATTTTTAATGATAAAGAGCTTGAGCTACTTATCAGTGGTCTTCCGGAGATTGATTTGGATGACTTGAAGGCTAACACCGAGTACACTGGCTATACAGCAGCATCTAGTGTTGTACAATGGTTTTGGGAGGTGGTTAAATGTTTCAACAAGGAGGACATGGCAAGACTGCTTCAATTTGTAACTGGCACATCAAAGGTAGATATAACACATTGTTCTTGCTCTTCTCCACAAGTGCTGGTTCAGTACCTGCAACACGGTTTATTCAATGCTACTGGATGTAGCAACAAGCGTTCATGTGTTTTTTTTTTTTTTTTTTCTGGCAATATATGCAACCCCCCCACCCTCCCCCAAAACAAACCCCCCTCCCAAAAAAAAAGGGGGCAAAACGTGCACATACTCTATGGGAAATGGACAGTCCCCAACTAA

Protein Analysis

3748

Amino Acids

411.21

Weight (kDa)

5.0

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 85 - 161 3.6e-12 Domain of Unknown Function (DUF908)
DUF908 PF06012 206 - 361 2.1e-26 Domain of Unknown Function (DUF908)
DUF913 PF06025 422 - 790 7e-92 Domain of Unknown Function (DUF913)
UBA_7 PF22562 1298 - 1342 2.1e-13 UBA-like domain
UBA PF00627 1298 - 1334 1.5e-06 UBA/TS-N domain
UBM PF14377 2637 - 2664 2.1e-08 Ubiquitin binding region
UBM PF14377 2674 - 2703 1.6e-10 Ubiquitin binding region
UBM PF14377 2710 - 2741 2e-07 Ubiquitin binding region
HECT PF00632 3430 - 3676 2.5e-68 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 6651, 6938
AarI CACCTGC 2 cut(s) 6971, 7217
AasI GACNNNNNNGTC 1 cut(s) 6880
AatII GACGTC 1 cut(s) 6868
Acc16I TGCGCA 1 cut(s) 7286
Acc36I ACCTGC 9 cut(s) 202, 1727, 5132, 5428, 6971, 7217, 8989, 9018, 11076
Acc65I GGTACC 1 cut(s) 3395
AccB1I GGYRCC 4 cut(s) 3395, 5068, 7573, 10048
AccB7I CCANNNNNTGG 4 cut(s) 3996, 6376, 7193, 9588
AccBSI CCGCTC 1 cut(s) 7964
AccI GTMKAC 4 cut(s) 5641, 6838, 10377, 10722
AccII CGCG 3 cut(s) 279, 10273, 10419
AccIII TCCGGA 3 cut(s) 8065, 9435, 10864
AclI AACGTT 1 cut(s) 3419
AcoI YGGCCR 6 cut(s) 402, 3987, 4752, 7195, 7213, 8395
AcvI CACGTG 1 cut(s) 10808
AcyI GRCGYC 1 cut(s) 6865
AdeI CACNNNGTG 3 cut(s) 5015, 8564, 9588
AfeI AGCGCT 1 cut(s) 3954
AflIII ACRYGT 4 cut(s) 4357, 4530, 6748, 7047
AhlI ACTAGT 3 cut(s) 913, 3431, 6002
AjiI CACGTC 1 cut(s) 2264
AjuI GAANNNNNNNTTGG 8 cut(s) 492, 524, 6131, 6163, 9533, 9565, 10354, 10386
AleI CACNNNNGTG 1 cut(s) 1268
Alw44I GTGCAC 3 cut(s) 1431, 5031, 11210
AlwNI CAGNNNCTG 8 cut(s) 400, 686, 1313, 1819, 2651, 5998, 9763, 11068
Ama87I CYCGRG 3 cut(s) 2442, 4047, 6996
Aor13HI TCCGGA 3 cut(s) 8065, 9435, 10864
Aor51HI AGCGCT 1 cut(s) 3954
ApaI GGGCCC 1 cut(s) 1006
ApaLI GTGCAC 3 cut(s) 1431, 5031, 11210
ArsI GACNNNNNNTTYG 2 cut(s) 952, 984
AseI ATTAAT 6 cut(s) 515, 1970, 3375, 5790, 8649, 10770
Asp700I GAANNNNTTC 4 cut(s) 261, 433, 2580, 10800
Asp718I GGTACC 1 cut(s) 3395
AspA2I CCTAGG 1 cut(s) 3245
AspLEI GCGC 6 cut(s) 1977, 3955, 4054, 7287, 7631, 8017
AsuC2I CCSGG 4 cut(s) 4048, 4049, 6997, 6998
AsuII TTCGAA 1 cut(s) 958
AvaI CYCGRG 3 cut(s) 2442, 4047, 6996
AvrII CCTAGG 1 cut(s) 3245
AxyI CCTNAGG 2 cut(s) 7479, 8613
BaeGI GKGCMC 4 cut(s) 1006, 1435, 5035, 11214
BaeI ACNNNNGTAYC 4 cut(s) 1926, 1959, 6597, 6630
BalI TGGCCA 2 cut(s) 3989, 7215
BamHI GGATCC 3 cut(s) 4018, 8739, 10531
BanI GGYRCC 4 cut(s) 3395, 5068, 7573, 10048
BanII GRGCYC 2 cut(s) 1006, 9674
BauI CACGAG 1 cut(s) 10712
BbrPI CACGTG 1 cut(s) 10808
BbvCI CCTCAGC 3 cut(s) 1128, 2766, 4014
BceAI ACGGC 9 cut(s) 8, 2631, 3540, 4739, 6832, 7819, 9963, 10070, 10511
BcgI CGANNNNNNTGC 4 cut(s) 7078, 7112, 8287, 8321
BciVI GTATCC 4 cut(s) 4324, 4648, 6976, 8842
BclI TGATCA 8 cut(s) 3481, 4794, 5329, 6172, 6739, 7075, 8604, 10735
BcnI CCSGG 4 cut(s) 4048, 4049, 6997, 6998
BcuI ACTAGT 3 cut(s) 913, 3431, 6002
BfmI CTRYAG 9 cut(s) 322, 392, 1361, 2339, 4113, 4431, 7146, 7740, 8778
BfoI RGCGCY 3 cut(s) 3956, 4055, 7632
BfuAI ACCTGC 9 cut(s) 202, 1727, 5132, 5428, 6971, 7217, 8989, 9018, 11076
BfuI GTATCC 4 cut(s) 4324, 4648, 6976, 8842
BglI GCCNNNNNGGC 1 cut(s) 9619
BglII AGATCT 3 cut(s) 2665, 8696, 8748
BlnI CCTAGG 1 cut(s) 3245
BlpI GCTNAGC 1 cut(s) 7635
BmcAI AGTACT 1 cut(s) 2932
BmeT110I CYCGRG 3 cut(s) 2442, 4047, 6996
BmgBI CACGTC 1 cut(s) 2264
BmrI ACTGGG 5 cut(s) 726, 2645, 2837, 4076, 6943
BmuI ACTGGG 5 cut(s) 726, 2645, 2837, 4076, 6943
BoxI GACNNNNGTC 2 cut(s) 1028, 2298
BplI GAGNNNNNCTC 2 cut(s) 10802, 10834
Bpu10I CCTNAGC 5 cut(s) 1128, 2766, 3956, 4014, 7251
Bpu1102I GCTNAGC 1 cut(s) 7635
Bpu14I TTCGAA 1 cut(s) 958
BpuMI CCSGG 4 cut(s) 4048, 4049, 6997, 6998
Bsa29I ATCGAT 1 cut(s) 5662
BsaAI YACGTR 4 cut(s) 1994, 5036, 6751, 10808
BsaBI GATNNNNATC 4 cut(s) 138, 1236, 3142, 8896
BsaHI GRCGYC 1 cut(s) 6865
BsaWI WCCGGW 8 cut(s) 895, 1172, 5089, 8065, 9435, 10089, 10127, 10864
BsaXI ACNNNNNCTCC 4 cut(s) 6915, 6945, 6948, 6978
Bse118I RCCGGY 3 cut(s) 2973, 7197, 8355
Bse21I CCTNAGG 2 cut(s) 7479, 8613
Bse8I GATNNNNATC 4 cut(s) 138, 1236, 3142, 8896
BseAI TCCGGA 3 cut(s) 8065, 9435, 10864
BseCI ATCGAT 1 cut(s) 5662
BseJI GATNNNNATC 4 cut(s) 138, 1236, 3142, 8896
BseRI GAGGAG 7 cut(s) 1610, 1975, 2973, 4140, 7995, 9587, 9729
BseSI GKGCMC 4 cut(s) 1006, 1435, 5035, 11214
BseYI CCCAGC 3 cut(s) 3263, 4786, 9476
BsgI GTGCAG 7 cut(s) 289, 546, 2661, 4046, 4392, 7137, 7361
Bsh1236I CGCG 3 cut(s) 279, 10273, 10419
BshNI GGYRCC 4 cut(s) 3395, 5068, 7573, 10048
BshVI ATCGAT 1 cut(s) 5662
BsiHKCI CYCGRG 3 cut(s) 2442, 4047, 6996
BsmI GAATGC 4 cut(s) 816, 3250, 9994, 10197
BsoBI CYCGRG 3 cut(s) 2442, 4047, 6996
Bsp119I TTCGAA 1 cut(s) 958
Bsp120I GGGCCC 1 cut(s) 1002
Bsp13I TCCGGA 3 cut(s) 8065, 9435, 10864
Bsp1407I TGTACA 4 cut(s) 5551, 8555, 9715, 10933
Bsp1720I GCTNAGC 1 cut(s) 7635
Bsp19I CCATGG 6 cut(s) 2109, 2823, 3391, 3990, 6375, 9220
BspDI ATCGAT 1 cut(s) 5662
BspEI TCCGGA 3 cut(s) 8065, 9435, 10864
BspFNI CGCG 3 cut(s) 279, 10273, 10419
BspHI TCATGA 2 cut(s) 1683, 3484
BspMAI CTGCAG 5 cut(s) 396, 1365, 2343, 4435, 8782
BspMI ACCTGC 9 cut(s) 202, 1727, 5132, 5428, 6971, 7217, 8989, 9018, 11076
BspQI GCTCTTC 4 cut(s) 267, 5840, 8546, 11047
BspT104I TTCGAA 1 cut(s) 958
BspT107I GGYRCC 4 cut(s) 3395, 5068, 7573, 10048
BsrBI CCGCTC 1 cut(s) 7964
BsrFI RCCGGY 3 cut(s) 2973, 7197, 8355
BsrGI TGTACA 4 cut(s) 5551, 8555, 9715, 10933
BssAI RCCGGY 3 cut(s) 2973, 7197, 8355
BssNAI GTATAC 2 cut(s) 5642, 10378
BssNI GRCGYC 1 cut(s) 6865
BssSI CACGAG 1 cut(s) 10712
Bst1107I GTATAC 2 cut(s) 5642, 10378
Bst2BI CACGAG 1 cut(s) 10712
BstACI GRCGYC 1 cut(s) 6865
BstAPI GCANNNNNTGC 4 cut(s) 2648, 4975, 11148, 11209
BstAUI TGTACA 4 cut(s) 5551, 8555, 9715, 10933
BstBAI YACGTR 4 cut(s) 1994, 5036, 6751, 10808
BstBI TTCGAA 1 cut(s) 958
BstDSI CCRYGG 9 cut(s) 24, 2109, 2823, 3391, 3990, 6375, 9220, 10052, 10527
BstEII GGTNACC 1 cut(s) 7100
BstENI CCTNNNNNAGG 6 cut(s) 102, 6807, 7224, 8488, 9014, 9067
BstFNI CGCG 3 cut(s) 279, 10273, 10419
BstH2I RGCGCY 3 cut(s) 3956, 4055, 7632
BstHHI GCGC 6 cut(s) 1977, 3955, 4054, 7287, 7631, 8017
BstNSI RCATGY 9 cut(s) 1474, 1806, 3809, 4361, 4534, 4784, 5558, 7051, 7795
BstPAI GACNNNNGTC 2 cut(s) 1028, 2298
BstPI GGTNACC 1 cut(s) 7100
BstSFI CTRYAG 9 cut(s) 322, 392, 1361, 2339, 4113, 4431, 7146, 7740, 8778
BstSLI GKGCMC 4 cut(s) 1006, 1435, 5035, 11214
BstUI CGCG 3 cut(s) 279, 10273, 10419
BstZ17I GTATAC 2 cut(s) 5642, 10378
Bsu15I ATCGAT 1 cut(s) 5662
Bsu36I CCTNAGG 2 cut(s) 7479, 8613
BsuI GTATCC 4 cut(s) 4324, 4648, 6976, 8842
BsuTUI ATCGAT 1 cut(s) 5662
BtgI CCRYGG 9 cut(s) 24, 2109, 2823, 3391, 3990, 6375, 9220, 10052, 10527
BtgZI GCGATG 2 cut(s) 879, 9959
BtrI CACGTC 1 cut(s) 2264
BveI ACCTGC 9 cut(s) 202, 1727, 5132, 5428, 6971, 7217, 8989, 9018, 11076
CaiI CAGNNNCTG 8 cut(s) 400, 686, 1313, 1819, 2651, 5998, 9763, 11068
CciI TCATGA 2 cut(s) 1683, 3484
CfoI GCGC 6 cut(s) 1977, 3955, 4054, 7287, 7631, 8017
Cfr10I RCCGGY 3 cut(s) 2973, 7197, 8355
Cfr9I CCCGGG 2 cut(s) 4047, 6996
ClaI ATCGAT 1 cut(s) 5662
CpoI CGGWCCG 1 cut(s) 10130
CseI GACGC 4 cut(s) 52, 8576, 8723, 10184
CsiI ACCWGGT 3 cut(s) 5935, 9526, 10647
CspCI CAANNNNNGTGG 2 cut(s) 5448, 5483
CspI CGGWCCG 1 cut(s) 10130
DraI TTTAAA 6 cut(s) 102, 1633, 2028, 2407, 6118, 10405
DraIII CACNNNGTG 3 cut(s) 5015, 8564, 9588
DrdI GACNNNNNNGTC 1 cut(s) 6880
DseDI GACNNNNNNGTC 1 cut(s) 6880
EaeI YGGCCR 6 cut(s) 402, 3987, 4752, 7195, 7213, 8395
Ecl136II GAGCTC 1 cut(s) 9672
Eco147I AGGCCT 2 cut(s) 6943, 7477
Eco24I GRGCYC 2 cut(s) 1006, 9674
Eco32I GATATC 2 cut(s) 4441, 7468
Eco47III AGCGCT 1 cut(s) 3954
Eco53kI GAGCTC 1 cut(s) 9672
Eco72I CACGTG 1 cut(s) 10808
Eco81I CCTNAGG 2 cut(s) 7479, 8613
Eco88I CYCGRG 3 cut(s) 2442, 4047, 6996
Eco91I GGTNACC 1 cut(s) 7100
EcoICRI GAGCTC 1 cut(s) 9672
EcoNI CCTNNNNNAGG 6 cut(s) 102, 6807, 7224, 8488, 9014, 9067
EcoO109I RGGNCCY 1 cut(s) 5624
EcoO65I GGTNACC 1 cut(s) 7100
EcoRI GAATTC 4 cut(s) 960, 7330, 9082, 9541
EcoRV GATATC 2 cut(s) 4441, 7468
EcoT22I ATGCAT 5 cut(s) 1625, 1808, 1876, 3807, 9994
EcoT38I GRGCYC 2 cut(s) 1006, 9674
FauI CCCGC 1 cut(s) 7131
FauNDI CATATG 2 cut(s) 331, 7072
FbaI TGATCA 8 cut(s) 3481, 4794, 5329, 6172, 6739, 7075, 8604, 10735
FblI GTMKAC 4 cut(s) 5641, 6838, 10377, 10722
FriOI GRGCYC 2 cut(s) 1006, 9674
FspI TGCGCA 1 cut(s) 7286
GlaI GCGC 6 cut(s) 1976, 3954, 4053, 7286, 7630, 8016
GsaI CCCAGC 3 cut(s) 3267, 4790, 9480
HaeII RGCGCY 3 cut(s) 3956, 4055, 7632
HgaI GACGC 4 cut(s) 52, 8576, 8723, 10184
HhaI GCGC 6 cut(s) 1977, 3955, 4054, 7287, 7631, 8017
Hin1I GRCGYC 1 cut(s) 6865
Hin6I GCGC 6 cut(s) 1975, 3953, 4052, 7285, 7629, 8015
HinP1I GCGC 6 cut(s) 1975, 3953, 4052, 7285, 7629, 8015
HincII GTYRAC 8 cut(s) 803, 2076, 3166, 4105, 7303, 7666, 8140, 8911
HindII GTYRAC 8 cut(s) 803, 2076, 3166, 4105, 7303, 7666, 8140, 8911
HindIII AAGCTT 4 cut(s) 1284, 4304, 5730, 9932
Hpy99I CGWCG 7 cut(s) 1515, 2928, 3354, 6867, 6870, 8739, 10155
Hsp92I GRCGYC 1 cut(s) 6865
HspAI GCGC 6 cut(s) 1975, 3953, 4052, 7285, 7629, 8015
Kpn2I TCCGGA 3 cut(s) 8065, 9435, 10864
KpnI GGTACC 1 cut(s) 3399
KroI GCCGGC 1 cut(s) 2973
KroNI GCCGGC 1 cut(s) 2975
Ksp22I TGATCA 8 cut(s) 3481, 4794, 5329, 6172, 6739, 7075, 8604, 10735
LguI GCTCTTC 4 cut(s) 267, 5840, 8546, 11047
MabI ACCWGGT 3 cut(s) 5935, 9526, 10647
MbiI CCGCTC 1 cut(s) 7964
MfeI CAATTG 4 cut(s) 3654, 7280, 7920, 8391
MlsI TGGCCA 2 cut(s) 3989, 7215
MluNI TGGCCA 2 cut(s) 3989, 7215
MmeI TCCRAC 8 cut(s) 5109, 5197, 8362, 8717, 9160, 9707, 9999, 10318
Mox20I TGGCCA 2 cut(s) 3989, 7215
Mph1103I ATGCAT 5 cut(s) 1625, 1808, 1876, 3807, 9994
MroI TCCGGA 3 cut(s) 8065, 9435, 10864
MroNI GCCGGC 1 cut(s) 2973
MroXI GAANNNNTTC 4 cut(s) 261, 433, 2580, 10800
MscI TGGCCA 2 cut(s) 3989, 7215
MslI CAYNNNNRTG 9 cut(s) 1108, 1268, 1879, 2055, 6036, 6435, 6707, 8679, 10716
Msp20I TGGCCA 2 cut(s) 3989, 7215
MspA1I CMGCKG 8 cut(s) 1310, 1366, 3263, 4816, 5335, 6191, 9413, 10135
MunI CAATTG 4 cut(s) 3654, 7280, 7920, 8391
Mva1269I GAATGC 4 cut(s) 816, 3250, 9994, 10197
MvnI CGCG 3 cut(s) 279, 10273, 10419
NaeI GCCGGC 1 cut(s) 2975
NciI CCSGG 4 cut(s) 4048, 4049, 6997, 6998
NcoI CCATGG 6 cut(s) 2109, 2823, 3391, 3990, 6375, 9220
NdeI CATATG 2 cut(s) 331, 7072
NgoMIV GCCGGC 1 cut(s) 2973
NmeAIII GCCGAG 1 cut(s) 2914
NsbI TGCGCA 1 cut(s) 7286
NsiI ATGCAT 5 cut(s) 1625, 1808, 1876, 3807, 9994
NspI RCATGY 9 cut(s) 1474, 1806, 3809, 4361, 4534, 4784, 5558, 7051, 7795
NspV TTCGAA 1 cut(s) 958
OliI CACNNNNGTG 1 cut(s) 1268
PaeI GCATGC 1 cut(s) 1474
PagI TCATGA 2 cut(s) 1683, 3484
PaqCI CACCTGC 2 cut(s) 6971, 7217
PceI AGGCCT 2 cut(s) 6943, 7477
PciI ACATGT 3 cut(s) 4357, 4530, 7047
PciSI GCTCTTC 4 cut(s) 267, 5840, 8546, 11047
PctI GAATGC 4 cut(s) 816, 3250, 9994, 10197
PdiI GCCGGC 1 cut(s) 2975
PdmI GAANNNNTTC 4 cut(s) 261, 433, 2580, 10800
PflFI GACNNNGTC 1 cut(s) 6867
PflMI CCANNNNNTGG 4 cut(s) 3996, 6376, 7193, 9588
PfoI TCCNGGA 3 cut(s) 3769, 5626, 9748
PmaCI CACGTG 1 cut(s) 10808
PmlI CACGTG 1 cut(s) 10808
Ppu21I YACGTR 4 cut(s) 1994, 5036, 6751, 10808
PpuMI RGGWCCY 1 cut(s) 5624
PscI ACATGT 3 cut(s) 4357, 4530, 7047
PshAI GACNNNNGTC 2 cut(s) 1028, 2298
PshBI ATTAAT 6 cut(s) 515, 1970, 3375, 5790, 8649, 10770
PsiI TTATAA 2 cut(s) 6651, 6938
Psp124BI GAGCTC 1 cut(s) 9674
Psp1406I AACGTT 1 cut(s) 3419
Psp5II RGGWCCY 1 cut(s) 5624
PspCI CACGTG 1 cut(s) 10808
PspEI GGTNACC 1 cut(s) 7100
PspFI CCCAGC 3 cut(s) 3263, 4786, 9476
PspOMI GGGCCC 1 cut(s) 1002
PspPPI RGGWCCY 1 cut(s) 5624
PsrI GAACNNNNNNTAC 2 cut(s) 5499, 5531
PstI CTGCAG 5 cut(s) 396, 1365, 2343, 4435, 8782
PstNI CAGNNNCTG 8 cut(s) 400, 686, 1313, 1819, 2651, 5998, 9763, 11068
PsyI GACNNNGTC 1 cut(s) 6867
PvuII CAGCTG 6 cut(s) 1310, 1366, 3263, 4816, 5335, 6191
RseI CAYNNNNRTG 9 cut(s) 1108, 1268, 1879, 2055, 6036, 6435, 6707, 8679, 10716
Rsr2I CGGWCCG 1 cut(s) 10130
RsrII CGGWCCG 1 cut(s) 10130
SacI GAGCTC 1 cut(s) 9674
SapI GCTCTTC 4 cut(s) 267, 5840, 8546, 11047
ScaI AGTACT 1 cut(s) 2932
SexAI ACCWGGT 3 cut(s) 5935, 9526, 10647
SfcI CTRYAG 9 cut(s) 322, 392, 1361, 2339, 4113, 4431, 7146, 7740, 8778
SfuI TTCGAA 1 cut(s) 958
SmaI CCCGGG 2 cut(s) 4049, 6998
SmiMI CAYNNNNRTG 9 cut(s) 1108, 1268, 1879, 2055, 6036, 6435, 6707, 8679, 10716
SpeI ACTAGT 3 cut(s) 913, 3431, 6002
SphI GCATGC 1 cut(s) 1474
SrfI GCCCGGGC 1 cut(s) 4049
SseBI AGGCCT 2 cut(s) 6943, 7477
SspI AATATT 4 cut(s) 4701, 6113, 9601, 9703
SstI GAGCTC 1 cut(s) 9674
StuI AGGCCT 2 cut(s) 6943, 7477
TauI GCSGC 6 cut(s) 407, 1612, 1676, 4883, 6588, 10419
TspGWI ACGGA 6 cut(s) 1078, 4673, 5231, 7721, 10400, 10712
TspMI CCCGGG 2 cut(s) 4047, 6996
Tth111I GACNNNGTC 1 cut(s) 6867
Van91I CCANNNNNTGG 4 cut(s) 3996, 6376, 7193, 9588
VneI GTGCAC 3 cut(s) 1431, 5031, 11210
VspI ATTAAT 6 cut(s) 515, 1970, 3375, 5790, 8649, 10770
XagI CCTNNNNNAGG 6 cut(s) 102, 6807, 7224, 8488, 9014, 9067
XbaI TCTAGA 2 cut(s) 5081, 8461
XceI RCATGY 9 cut(s) 1474, 1806, 3809, 4361, 4534, 4784, 5558, 7051, 7795
XcmI CCANNNNNNNNNTGG 4 cut(s) 3919, 5012, 6629, 8663
XmaI CCCGGG 2 cut(s) 4047, 6996
XmaJI CCTAGG 1 cut(s) 3245
XmiI GTMKAC 4 cut(s) 5641, 6838, 10377, 10722
XmnI GAANNNNTTC 4 cut(s) 261, 433, 2580, 10800
ZraI GACGTC 1 cut(s) 6866
ZrmI AGTACT 1 cut(s) 2932
Zsp2I ATGCAT 5 cut(s) 1625, 1808, 1876, 3807, 9994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.