Rh5DG538700

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0007872
Physical Location & Seq
Reverse (-)
83045424 .. 83061564
16141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG538700.1

Sequence Viewer

Length: 11433 bp
ATGAAGTTGAAGAGAAGGAGGGCCGTGGAAGTGCCTCCGAAAATTAGATCCTTCATCAACAGCGTCACTGCTGTTCCACTTGAGAATATAGAGGAACCTTTAAAAGGTTTTGTCTGGGAGTACGATAAGGGAGATTTCCATCATTGGGTTGATCTGTTCAACCATTTTGATTCATTTTTTGAGAAGCATATAAAATCTAGGAAGGACTTGCAGGTTGAGGATAATTTTCTCGACTCTGATCCTCCTTTTCCAAGAGAAGCTCTTCTTCAAGTTCTCCGCGTGATAAGAATAATTTTGGAGAACTGCACAAATAAACACTTCTACAGTTCATATGAGCATCTCTCATCTTTGCTTGCTTGCACCGATGCGGATGTGGTTGAGGCTTGCCTGCAGACTCTGGCTGCATTTTTGAAGAAAACAGTAGGAAAGTATTCCATCAGAGATGCTTCACTAAATTCAAAGTTGTTTGCTCTTGCACAAGGTTGGGGAGGAAAGGAAGAGGGTCTTGGATTAATTGCCTGTGCAGTACAGGATGGTTGTGACCCTATTGCTTATGAGTTAGGATGCACCCTTCACTTTGAGTTTTATGCGTTGAAAGATGCAAGTGAATTACCAACCACAGAACAGCAGACCCAAGGTTTACAAATCATTCATTTACCTAACATCAACACTCATCCAGAGACTGATCTTGAGCTTTTGAGTAAGCTAATTGCCGAATACAAAGTACCCAGTAGTTTGAGATTTGCTTTATTGACAAGATTGCGTTTTGCAAGGGCTTTTGGCTCTTTAGCTACTCGTCAACAGTATGCCTGCATTCGTCTGTATGCCTTCATAGTTCTTGTTCAAGCAAATAGTGATGGCGATGACCTTGTTTCTTTCTTCAACACTGAACCGGAGTTTGTCAATGAACTAGTGTCATTATTGAGCTTGGAAGATGTAGTTCCTGAGAAAATTCGAATTCTATGTCTTCTCTCATTGGTTGCTCTTTCTCAAGATCGGGCCCGACAGCCTAATGTTTTGACTGCTGTCACATCTGGTGGGCATCGTGGAATCCTATCCAGCCTCATGCAGAAGGCCATTGATTCCGTCATCAGTGATACATCAAAGTGGTCTGTTGTTTTTGCTGAGGCTCTGTTATCTCTTGTTACAGTTTTGGTTTCATCATCATCCGGTTGTTCAGCCATGCGTGAAGCTGGATTTATCCCCACCCTTCTCCCGTTGCTTAAAGATACAAATCCACAGCACCTACATTTGGTCAGCACATCTGTGCATATTTTAGAAGCTTTTATGGATTACAGTAATCCAGCTGCTGCATTGTTCAGGGACTTGGGCGGTTTAGATGATACCATCTCTCGCCTGCAGCTGGAAGTGTCTCATGTAGAAAATGGTCCAAAACAACAAGATGAAGATTCTAGTACCTCTGGAAGTGCACAAGTAGTTGCAGGAACTTCCACTGAGATAGACAGCATGCAACCTCTGTATTCAGAACCTCTTGTTTCATATCATCGACGACTGCTGATGAAAGCTCTACTGCGTGCTATATCTCTGGGGACTTATGCACCAGGAAATACTGCCCGTGTTTATGGCTCAGAGGAGAGTCTATTGCCGCAATGCTTATGCATAATCTTTAAAAGGGCAAAAGATTTTGGTGGTGGGGTGTTTTCACTTGCGGCTTCTGTCATGAGTGATTTAATTCACAAAGATCCTACCTGTTTTCCAGTTTTAGATGAAGCAGGTCTTCCTTCTACCTTTCTGGATGCTATAATGGATGGCGTTCTTTGCTCAACAGAGGCCATTACATGCATCCCACAGTGTCTGGATGCCCTGTGTCTAAATAATAATGGTCTTCAGGCTGTGAAAGATCGCAATGCATTGAGGTGCTTTGTGAAGATATTTACTTCAAGAACCTATCTGCGTGCTCTAACAAGTGATACACCTGTCTCCCTATCTAGTGGATTGGATGAATTAATGCGCCATGCCTCCTCATTACGTGGTCCTGGTGTGGATATGCTAATTGAGATTTTAAATGCCATCTCAAAAATTGGACATGGGGGTGATTCTTCTCTCACGTCAACCGAACTTTTATCTTCTTCTACTCCTGTTCCCATGGAAACTGATGGAGAAGAAAGGAATGTAGTCATGTCAGATGATAGGGAGTCATCCAAGATGGATAGTTCGGAGCAGGGAACTGAAACATCTTCTGATTCTTTAGTGGGAAATGCTGAAGTATTGCTTCCTGATTGTGTGAGCAATGTTGCACGTCTTCTTGAAACTATACTTCAGAATGGTGACACTTGTCGTATATTTGTGGAGAAGAAGGGAATAGAAGCTGTCCTGCAGTTGTTTACCTTGCCTTTAATGCCTCTTTCTGTTTCAGTTGGTCAGAGTATATCTATTGCATTTAAGAACTTCTCACCACAACATTCTGCTTCTTTGGCTCGGGCAGTATGTTCATTTTTGAGAGAGCATCTGAAATCAACAAATGAACTCTTAGTTTCAGTTGGTGGGACTCAACTTTCTTTGGTGGAATCTGCAAAGCAAACTAAGGTTTTGAAGCATCTTTCCAGTCTTGAAGCTATTCTGTCTCTGTCTAATGTTCTATTGAAAGGGACGACTACTGTGGTGTCTGAACTGGGTGCAGCAGATGCTGATGTATTGAAAGATCTTGGGAGTACATACAGGGAAATCCTTTGGCAAATCTCTCTGTGTAATGATGTCAAGTCTGATGAGAAGATCAATGCTGAACAAGAACAAGACATTGCTGAGGCAGCTCCATCTAATGCCTCGGGAAGGGAGAGTGATGATGATGCTAATACTCCCATGGTGAGATACATGAACCCAGTTTCTATTAGGAATCAGCCCTTTTGGGGTGGAGAGCGTGAGTTCCTTTCAGTTGTTCGCGGTGGTGAAGGTTTGCACCGTCGTAGTACTCGGCATGGGATTACACGCATGAGAGGAGGAAGGACAGGCCGGCATTTGGAGGCTTTACATATTGATTCTGAATCTTCTTCCACAGTATCAGAGGCAACTACATCCCAGGATTTGAAAAAGAAAAGTCCTGATGTGCTTGTTACAGAAATTCTTAACAAGCTGGCTTCCACTCTACGTTCCTTCTTCACAGCTCTTGTCAAGGGATTCACATCACCAAATAGGCGTAGAGTTGACTCTGGATCATTGAGTTTGGCCTCAAAAACTCTTGGAACTGCCCTAGCTAAAGTTTATCTTGAGGCTCTTATTTTCTCTGGGCATTCTACTTCAGCTGGGCTTGATACTTCATTATCAGTCAAGTGTCGATACCTTGGAAAAGTTGTGGATGATATGATGGCACTTACATTTGATAGCAGACGACGTACTTGTTATACTGCAACAATTAATAATTTCTATGTCCATGGTACCTTTAAGGAGCTGCTCACAACGTTTGAAGCTACTAGTCAGTTGTTGTGGACCCTACCATATTGTATGCCAACATCAGGCATTGATCATGAAAAGACAGGTGAAGGCAGTAAACTGTCCCATAGTTCGTGGCTGCTTGAGACTCTACAAAGCTATTGCCGTGTGCTGGAGTATTTTGTTAATTCTTCTTTACTCTTATCTACAACCTCTGCATCCCAGGCACAGTTGCTTGTTCAGCCAGTTGCAGTTGGTCTATCAATTGGGCTTTTCCCTGTGCCAAGGGAACCAGAAGTTTTTGTTCGTATGCTTCAGTCTCAAGTTCTTGATGTAATACTTCCTATCTGGAACCACCCCATGTTTCCAAATTGTAGTCCAGGATTTGTTGCTTCCATTGTTTCACTTGTTATGCATGTTTATTCTGGTGTGGGAGATGTGAAGCAGAATCGCAGTGGCATTGCTGGAACTGCAAACCAAAGATTCATGCCTCCACCACTTGATGAAGTTACTATTACTACCATTATGGAGATGGGTTTTTCAAGGGCCAGAGCAGAAGAAGCGCTTAGGAGGGTGGAAACAAATAGCGTTGAAATGGCCATGGAGTGGCTTTGCAGCCATGCTGAGGATCCTGTGCAGGAGGATGATGAACTGGCCCGGGCACTTGCTCTATCACTGGGAAATTCATCTGAAACATCTAAAGCTGATAATGTTGACAAGTCTGTAGATGTGCTGGCAGAAGAGAGTTGTGTGAAAGCTCCTCCAGTTGATGATATTCTTGCTGCATCAGTTAAGTTGTTTCAGAGCAGTGACACAATGGCCTTCCCATTGACAGATTTGCTTGTGACACTTAGCAATCGGAACAAAGGTGAAGACCGTCCTAAAGTTGCATCTTATCTAATTCAGCAGCTCAAGCTTTGTCCATTGGATTTTTCTAAGGATACCAGTTCTTTGAGTATGTTATCACATGTTATAGCATTGCTGCTTTCTGAGGATGGAAGTACAAGGGAAATTGCTGCACAGAATGGTATTGTGTCTGCTGCAGTAGATATCTTAATGAATTTTAAGGCCAAAGACGAGTCAGGCAATGAACTTCTTGTTCCAAAATGTATTAGTGCTCTACTGCTTATTTTGGATAACATGTTGCAATCAAGGCCCAGAATTTCTGAGAACATTGAAGAGACTCAGACAGGATCTCTGTCTGAACTATCTGGAGAGCGTACTTCCTTGTCAATCCCTGATGCAGTTACAGAGAAAAAACAGGATACGGATGCCCAGGAAAAAGATAGTGGCACTGGATTTGAGAAAATATTGGGCAAATCAACTGGTTATTTGACTATGGAAGAGAGTCAAAAGGTGCTGGCCGTTGCCTGTGATTTGATAAAGCAGCATGTCCCAGCTATGATCATGCAGGCTGTTTTACAGCTGTGTGCTCGTTTGACAAAAACTCATGCTCTTGCTTTGCAGTTTCTTGAACATGGAGGATTAGTGGCTCTTTTTGGCCTTCCCAGAAGTTGTTTTTTCCCTGGATATGACACTGTTGCATCTGCTATTGTTCGCCATCTCCTTGAAGATCCGCAAACACTGCAAACAGCAATGGAATTGGAAATTCGCCAAACACTGAGTGGCAACAGGCATGGTGCACGTACTTCTGCAAGGACATTTTTGACATCAATGGCACCTGTAATCTCTAGAGATCCGGTTGTTTTTATGAAAGCTGCTGCTGCTGTTTGTCAGTTGGAGACATCAGCAGGTAGGACATTCATTGTCTTAATGAAGGAAAAAGAAAAGGAAAAGGACAAACCTAAAGCATCTGGTGGTGAGGTTGGATTATCTTCCAATGAATCTATCCGTATTCCTGAAAATAAAGTACATGATGGATCAGGTAAATGCTTGAAAGGTCACAAGAAGATCCCTGCTAATCTTACTCAAGTGATTGATCAGCTGCTTGAAATTGTTTTGAAATACTATTTTCCAAAGAGCCAGGAAGATTCTCAGAATAACCTGTCTTCTATGGAGGTAGATGAACCTGCTACCAAGGTAAAGGGTAAATCAAAGGTTGATGAGACAAGGAAAGTGGAGTCTGAATCTGAAAGATCTGCAGGGCTGGCAAAGGTAACATTTGTTCTCAAGTTACTGAGTGATATTCTTCTCATGTATGTACATGCAGTTGGTGTTATACTTAAACGGGATTTGGAATTGGCTCAATTACGGGTAGCTAATCAACTGGAAGGTCCTGGACATGGTGGTATACTTCATCATGTGATTCATCGATTGCTTCCACTCACCATTGATAAATCTGCTGGACCTGATGAATGGAGAGACAAGTTATCTGAAAAAGCTTCTTGGTTCCTGGTAGTTCTGTGTGGTCGTTCTGGTGAAGGGCGTAGAAGAGTAATTAATGAGCTTGTGAAAGCATTATCATCATTTTCAAACATTGATGGTAATTCTTCGAAGAGCATCTTATTGCCAGATAAAAAGGTTTATGCTTTTGTGGATTTGGTGTACTCTATTTTGTCTAAAAATTCATCATCAAGCAACTTACCTGGTACGGGGTTTTCACCTGACATAGCAAAAAGCATGATAGATGGGGGAATGATTCAGTGTCTGACTAGTATTCTCCAGGTGATTGATTTGGACCATCCTGATGCTCCCAAAACTGTGAATCTCATACTCAAGGCTTTAGAAAGTCTAACCAGGGCTGCTAATGCTAGTGAGCAATATTTTAAATCTGATGAGACAAACAAGAAAAAGTCCATGGTGTTAAATAGAAGATCTGATGATCAGGTAACTACTCCAGCTGATGATACATTGGGGCATAATCAGAATACAAGCAGTGAGCAGGATGTCAGAGATGCAGTACCAACTGAACAACAGGATCAAGGAACTTCTCAAAGTGAAGGTAATCCTGATGCAACTCCGAACCAGTCAGGGGAACATGATATGAGAATTGAAGTTGAAGGACCATTGGCTTCTAACCAACCCATGGAGCTTGGGATGGATTTTATGCGTGAAGAGATGGAAGAAGGCAATGTGTTGCACAACAATGACCAAATTGAAATGACTTTTCGTGTTGAGGGTAGGGCAGATGATGACATGGGTGATGAAGATGATGACATGGGTGATGATGGTGAGGATGATGAGGATGATGATGATGGAGAGGATGAGGATGAGGATATAGCAGAAGATGGTGGCGGCATGATGTCTCTGGCTGATACTGATGTGGAAGACCATGATGATACTGGCCTGGGAGATGATTATAATGATGAGATGATTGATGAAGATGATGATGATTTCCATGAGAATCGTGTCATAGAAGTGAGATGGAGGGAAGCCCTTGACGGGCTTGATCATTTACACGTACTTGGGCAACCTGGAGCTGCAAGTGGTCTGATTGATGTTGCTGCCGAACCTTTTGAAGGGGTTAATGTGGATGACCTTTTTGGTCTACGAAGGCCGTTAGGTTTTGATCGACGTCGTCAGACGAGTAGGTCTTCCTTTGAGCGATCTGTTACAGAAGCAAATGGCTTTCAACATCCTCTCCTTATAAGGCCTCCCCAGTCTGGAGATTTGGTATCCATGTGGTCAGCAGGTGGAAATTCATCCCGGGACTTAGAAGCTCTATCATCAGGGAGCTTTGATGTAGCTCATTTCTACATGTTTGATGCTCCTGTTCTTCCATATGATCATGTTCCAAGCAATCTTTTCGGTGACCGTTTGGGTGGTGCAGCCCCGCCACCATTGACTGATTATTCTGTAGGTATGGATTCATTGCAGTTATCGGGACGAAGAGGCCCAGGTGATGGCCGGTGGACTGATGATGGCCAGCCTCAAGCAGGTGCTCATGCTGCTGCTATTGCTCAGGCAGTTGAGGAACAGTTTATATCCCAATTGCGCAGTCTTGCTCCTGTTGACACCCCTGTTGAACCACATTCTCAGAATTCAGGAGTGCAGGAGAAACAGCCAGATGTGCCTCCTTCAACTGATGGTCAAGTAGTAGTAGATCGTGGTAACACCACCAGCCAACAAGTTGAAGATCAGCACCAAGACAGGGGTGTTGAGGTGACACATCAAGATATCTCCAGGCCTGAGGGTATTCCTTGCCAAGAACAAGTCAATCAAGAATCCTTTGTCGAAGATGCAGGGGGCTGTTTGCAGGAACCTGAACCAATGTCAATCCAGGCACCTTCTTTGGACAGTACACGAAATGATAACATGGACATTGGGGAGGGGAATGGCGCTGCTGAGCAAGAAGGGTCAATGCCGGAATTTGTCAACTCATCTGCAAGCACAAGGGTTGATTTACAACAGGAAGAGGGTTCTGAAGTGCCTTCTAATGTCAATGATGCTACAGTAGAAGCTATGGGTCAGGATGGATCTTCAGGCAATCAAGTTGGTGACATGCCAGCAAATTTCGGCTTCAATGTGTCTAATTCAGGTGATTCTCATACTTCTCTGGTCCCAGAAAATGTTGATGTTGACATGAATTGCATTGATGAAGTAAATCAAACTGGCCATCCCATGCCTGCTTTTGAAAATGGTACAGATGAGCCGTCAAGCCAAAACACATTGGTTGCTCCAGAAGCTAATCAGGCTGAACAAGTTACTTTGAACAATGAGGCTCCTGGTGCTAATGCAATTGACCCTACATTCTTGGAGGCTTTACCTGAAGAGTTGAGAGCGGAGGTTCTTGCTTCACAACAAGCTCAGTCAGTTCAACCTCCTCCTTATGCGCCACCTTCTGCGGACGACATTGATCCTGAGTTTTTAGCCGCCCTTCCTCCGGATATTCAAGCAGAAGTTTTGGCTCAACAAAGAGCACAAAGAGTTGCACAACAGGCTGAAGGACAACCTGTTGACATGGACAATGCTTCAATAATTGCTACTTTTCCTGCTGATTTACGGGAAGAGGTACTTTTAACTTCTTCAGAAGCAGTTTTGTCTGCATTGCCTTCTCCACTACTGGCTGAAGCTCAAATGCTAAGAGATCGAGCAATGAGTCATTATCAGGCTCGCAGCCTTTTCGGGAGCAGCCACAGGCTGAATAATAGGAGAAATGGATTGGGTTTTGACCGGCATGCAGTAATGGACAGGGGTGTTGGAGTCACAATTGGCCGGAGGGCAGTTTCTTCTATTACAGATAGCTTAAAGGTCAAGGAAATTGAAGGCGAGCCACTTCTAGATGCAAATTCATTGAAAGCCTTAATTAGGCTTCTACGATTAGCACAGCCCCTTGGTAAAGGACTCTTGCAGAGGCTCTTCTTAATCCTTTGTACACACAGTGTTACAAGAGCAATTTTATTGCGTCTTTTGCTCGATATGATCAAGCCTGAGGCTGAAGGCTCAGTCAGTGGATTAGCTACTATTAATTCCCAAAGGCTTTATGGTTGCCACTCAAATGTTGTATATGGCAGATCTCAGTTGTTAGATGGTCTTCCTCCCTTGGTGTTGCGTCGGATCCTTGAGATCTTGACTTATTTAGCTACAAATCATTCTGCAGTGGCAAATATGTTATTCTGCTTTGATTTCTCAGGTGTTCCTCAGTCTTTAAGTCCCTTAAATATGGATACCAAGAAGGACAAAGGCAAAGAGAAAATCGGAGAAGGAGGATTTTCATCTAATCCTGTCAACACCCAGGATGGGGATGTTCCCCTGATATTGTTTCTGAAGCTCCTTAATCGACCTCATTTCTTGCGTAGCACTGCTCATCTTGAGCAGGTCATGGACCTGCTTCAGGTTGTTGTTGATAATTCAGCTTCAAAATTAGAGGTCCATTCTCCCTCTGAAAGGGTCGATGGGAATTCCCAAAATCTATCTATAAGTGAAACTTCTGGAGATGGTCAGAACGGTCGTCCTGTGGAACCAGAATCTCAGCAAGAGGTTAAACCTGATGGTGTTGGATCATCAACTTCAGATGCAAACAAAAGTACAGATACCCATAGTATTTTCTTGAAGCTGCCAGAATCCGATTTGCATAATCTTTGCAGTCTTCTTGGTCGTGAGGGGCTTTCAGATAAAGTTTATATGCTTTCCAGTGAGGTGCTGAAGAAGTTGGCCTCAGTTGCAGTGACCCATCGAAAGTTCTTTATCTCAGAGCTTTCAGAATTAGCTCATGGTTTGAGTGCCTCAGCTGTCAGCGAGCTTGTCACTCTCCGGAATACACAGATGTTGGGTTTGAGTGCTGGTTCTATGGCTGGGTCGGCAATCTTACGAGTATTGCAATCACTTTGCTCACTCACTTCACCTGGTACAAATGAGAATTCAGTTTTGGAGAATGATGCAGAGCAGGAGGAGCACGCCACCATGTGGAAGCTAAATATTGCACTTGAGCCATTGTGGCAAGAATTGAGTGACTGTATAAGTGCCACTGAAACACAGTTGGGCCAGAGCTCTTTTTGTCCAACCATGTCCACTATAAATATTGGGGACCATGTACAAGGTTCCTCTTCTTCATCTCCTCTTCCTCCTGGAACCCAGAGACTGCTTCCTTTTATGGAGGCATTTTTTGTATTGTGTCAAAAGCTACAAGCAAACCACTCTATTACGCTGCAAGATCAAGCTAATGTGACTGCAAGAGAAGTCAAAGAGTCTGCTGGAAATTCAGATCCTTCAGGTACTAAGTTTTATAGCTGTGGGGATTCTCAGAGGAAGCTTGATGGTGCTGTCACATTTACAAGGTTTGCGGAGAAGCATCGCCGTCTTTTGAATGCATTTATCAGACAGAATCCAGGGCTGTTGGAGAAATCCCTTACTATGATGTTGAAGGCACCACGGCTAATTGATTTTGATAACAAGAGAGCATATTTCCGGTCAAGAATTAGGCAACAGCATGAGCAACATCTCTCCGGTCCGCTGCGAATAAGTGTTCGTCGTGCTTATGTTTTGGAAGATTCTTACAATCAGTTGAGAATGCGTCCTAATCAGGACATGAAGGGACGATTAAATGTCCAATTCCAAGGGGAAGAGGGTATTGATGCTGGTGGTCTAACGCGAGAATGGTATCAATTACTATCAAGGGTTATATTTGACAAAGGTGCATTGCTTTTCACTACTGTCGGAAACAATGCAACTTTCCAGCCAAACCCTAATTCTGTATACCAGACGGAACATCTTTCTTACTTTAAATTTGTGGGCCGCGTGGTTGCAAAGGCAGTATTTGATGGGCAACTTTTGGATGTTTATTTCACTCGATCCTTCTACAAGCACATACTTGGTGTAAAGGTGACATACCATGATATAGAAGCCGTGGATCCTGATTACTACAAGAATTTGAAATGGATGTTAGAGAATGATGTGAGTGATATTCCTGACCTGACGTTTAGCATGGATGCGGATGAAGAAAAGCATATTCTTTATGAGAAAAACCAGGTGACTGATTATGAGCTTAAACCTGGAGGACGAAATATCAGGGTTACGGAAGAAACTAAGCACGAGTATGTAGACCTTGTAGCTGATCATATTTTGACAAATGCTATTCGTCCACAAATTAATTCTTTCTTGGAGGGGTTCAATGAATTGGTTCCACGCGAGCTTATCTCGATTTTTAATGACAAAGAGCTTGAGCTACTTATCAGTGGTCTACCGGAGATTGATTTGGATGACTTGAAGGCAAACACCGAGTACACTGGCTATACAGCAGCATCTAGTGTTGTACAATGGTTTTGGGAGGTGGTTAAATGTTTCAACAAGGAGGACATGGCAAGACTGCTTCAATTTGTAACTGGCACATCAAAGGTAGATATAACACATTGTTCTTGCTCTTCTCCACAAGTGCTGGTTCAGTACCTGCAGCACGGTTTATTCAATGCTACTGGATGTACCAACAAGCGTTCATGTTTTTTTCTGGCAATATATGCAACCCCCCAACCCTCCCCCAAAACAAACCCCCCTCCCAAAAAAAAAAACAAAAAAATAAGGGGCAAACGTGCACATACTTCTCTATGGGAAACGGACAATCCCCAACTAAAGCCGACCTCTGTCTCCTCCCATTTTAATGTTTTTCAACTGAATTTTCTTCACGGATTATCACTTCAAATTGACATTTGA

Protein Analysis

3810

Amino Acids

417.96

Weight (kDa)

5.0

Isoelectric Point (pI)

46.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF908 PF06012 85 - 155 1.7e-14 Domain of Unknown Function (DUF908)
DUF908 PF06012 205 - 360 2.2e-26 Domain of Unknown Function (DUF908)
DUF913 PF06025 421 - 789 6.4e-92 Domain of Unknown Function (DUF913)
UBA_7 PF22562 1297 - 1341 1.6e-13 UBA-like domain
UBA PF00627 1297 - 1333 4e-07 UBA/TS-N domain
UBM PF14377 2672 - 2699 2.1e-08 Ubiquitin binding region
UBM PF14377 2709 - 2738 1.6e-10 Ubiquitin binding region
UBM PF14377 2745 - 2776 2.1e-07 Ubiquitin binding region
HECT PF00632 3465 - 3711 2.4e-68 HECT-domain (ubiquitin-transferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 6648, 6935
AarI CACCTGC 2 cut(s) 6968, 7214
AasI GACNNNNNNGTC 1 cut(s) 6877
AatII GACGTC 1 cut(s) 6865
Acc16I TGCGCA 1 cut(s) 7283
Acc36I ACCTGC 9 cut(s) 202, 1724, 5129, 5425, 6968, 7214, 9094, 9123, 11181
Acc65I GGTACC 1 cut(s) 3392
AccB1I GGYRCC 4 cut(s) 3392, 5065, 7570, 10153
AccB7I CCANNNNNTGG 4 cut(s) 3993, 6373, 7190, 9693
AccBSI CCGCTC 1 cut(s) 8069
AccI GTMKAC 5 cut(s) 5638, 6835, 10482, 10827, 10966
AccII CGCG 5 cut(s) 279, 2901, 10378, 10524, 10914
AccIII TCCGGA 2 cut(s) 8170, 9540
AclI AACGTT 1 cut(s) 3416
AcoI YGGCCR 6 cut(s) 3984, 4749, 7192, 7210, 7900, 8500
AcyI GRCGYC 1 cut(s) 6862
AdeI CACNNNGTG 3 cut(s) 5012, 8669, 9693
AfeI AGCGCT 1 cut(s) 3951
AflIII ACRYGT 4 cut(s) 4354, 4527, 6745, 7044
AhlI ACTAGT 3 cut(s) 910, 3428, 5999
AjiI CACGTC 2 cut(s) 2070, 2261
AjuI GAANNNNNNNTTGG 6 cut(s) 489, 521, 9638, 9670, 10459, 10491
AleI CACNNNNGTG 1 cut(s) 1265
Alw44I GTGCAC 3 cut(s) 1428, 5028, 11313
AlwNI CAGNNNCTG 8 cut(s) 397, 683, 1310, 1816, 2648, 5995, 9868, 11173
Ama87I CYCGRG 4 cut(s) 2439, 2785, 4044, 6993
Aor13HI TCCGGA 2 cut(s) 8170, 9540
Aor51HI AGCGCT 1 cut(s) 3951
ApaI GGGCCC 1 cut(s) 1003
ApaLI GTGCAC 3 cut(s) 1428, 5028, 11313
ArsI GACNNNNNNTTYG 2 cut(s) 949, 981
AseI ATTAAT 6 cut(s) 512, 1967, 3372, 5787, 8754, 10875
Asp700I GAANNNNTTC 4 cut(s) 261, 430, 2577, 10905
Asp718I GGTACC 1 cut(s) 3392
AspLEI GCGC 5 cut(s) 1974, 3952, 7284, 7628, 8122
AsuC2I CCSGG 4 cut(s) 4045, 4046, 6994, 6995
AsuII TTCGAA 2 cut(s) 955, 5840
AvaI CYCGRG 4 cut(s) 2439, 2785, 4044, 6993
AxyI CCTNAGG 2 cut(s) 7476, 8718
BaeGI GKGCMC 5 cut(s) 1003, 1432, 4051, 5032, 11317
BaeI ACNNNNGTAYC 4 cut(s) 1923, 1956, 6594, 6627
BalI TGGCCA 3 cut(s) 3986, 7212, 7902
BamHI GGATCC 3 cut(s) 4015, 8844, 10636
BanI GGYRCC 4 cut(s) 3392, 5065, 7570, 10153
BanII GRGCYC 2 cut(s) 1003, 9779
BauI CACGAG 1 cut(s) 10817
BbvCI CCTCAGC 4 cut(s) 1125, 2763, 4011, 9514
BceAI ACGGC 8 cut(s) 8, 3537, 4736, 6829, 7924, 10068, 10175, 10616
BcgI CGANNNNNNTGC 4 cut(s) 7075, 7109, 8392, 8426
BciVI GTATCC 4 cut(s) 4321, 4645, 6973, 8947
BclI TGATCA 8 cut(s) 3478, 4791, 5326, 6169, 6736, 7072, 8709, 10840
BcnI CCSGG 4 cut(s) 4045, 4046, 6994, 6995
BcuI ACTAGT 3 cut(s) 910, 3428, 5999
BfoI RGCGCY 2 cut(s) 3953, 7629
BfuAI ACCTGC 9 cut(s) 202, 1724, 5129, 5425, 6968, 7214, 9094, 9123, 11181
BfuI GTATCC 4 cut(s) 4321, 4645, 6973, 8947
BglI GCCNNNNNGGC 1 cut(s) 9724
BglII AGATCT 5 cut(s) 2662, 5483, 6161, 8801, 8853
BlpI GCTNAGC 1 cut(s) 7632
BmcAI AGTACT 1 cut(s) 2929
BmeT110I CYCGRG 4 cut(s) 2439, 2785, 4044, 6993
BmgBI CACGTC 2 cut(s) 2070, 2261
BmrI ACTGGG 5 cut(s) 723, 2642, 2834, 4073, 6940
BmuI ACTGGG 5 cut(s) 723, 2642, 2834, 4073, 6940
BoxI GACNNNNGTC 3 cut(s) 1025, 2295, 11363
BplI GAGNNNNNCTC 4 cut(s) 326, 358, 10907, 10939
Bpu10I CCTNAGC 6 cut(s) 1125, 2763, 3953, 4011, 7248, 9514
Bpu1102I GCTNAGC 1 cut(s) 7632
Bpu14I TTCGAA 2 cut(s) 955, 5840
BpuMI CCSGG 4 cut(s) 4045, 4046, 6994, 6995
Bsa29I ATCGAT 1 cut(s) 5659
BsaAI YACGTR 3 cut(s) 1991, 5033, 6748
BsaBI GATNNNNATC 4 cut(s) 138, 1233, 3139, 9001
BsaHI GRCGYC 1 cut(s) 6862
BsaWI WCCGGW 8 cut(s) 892, 1169, 5086, 8170, 9540, 10194, 10232, 10969
BsaXI ACNNNNNCTCC 6 cut(s) 4860, 4890, 6912, 6942, 6945, 6975
Bse118I RCCGGY 3 cut(s) 2970, 7194, 8460
Bse21I CCTNAGG 2 cut(s) 7476, 8718
Bse8I GATNNNNATC 4 cut(s) 138, 1233, 3139, 9001
BseAI TCCGGA 2 cut(s) 8170, 9540
BseCI ATCGAT 1 cut(s) 5659
BseJI GATNNNNATC 4 cut(s) 138, 1233, 3139, 9001
BseRI GAGGAG 8 cut(s) 1607, 1972, 2970, 4137, 8100, 9692, 9834, 11359
BseSI GKGCMC 5 cut(s) 1003, 1432, 4051, 5032, 11317
BseYI CCCAGC 3 cut(s) 3260, 4783, 9581
BsgI GTGCAG 7 cut(s) 289, 543, 2658, 4043, 4389, 7134, 7358
Bsh1236I CGCG 5 cut(s) 279, 2901, 10378, 10524, 10914
Bsh1285I CGRYCG 1 cut(s) 9238
BshNI GGYRCC 4 cut(s) 3392, 5065, 7570, 10153
BshVI ATCGAT 1 cut(s) 5659
BsiEI CGRYCG 1 cut(s) 9238
BsiHKCI CYCGRG 4 cut(s) 2439, 2785, 4044, 6993
BsmI GAATGC 4 cut(s) 813, 3247, 10099, 10302
BsoBI CYCGRG 4 cut(s) 2439, 2785, 4044, 6993
Bsp119I TTCGAA 2 cut(s) 955, 5840
Bsp120I GGGCCC 1 cut(s) 999
Bsp13I TCCGGA 2 cut(s) 8170, 9540
Bsp1407I TGTACA 4 cut(s) 5548, 8660, 9820, 11038
Bsp1720I GCTNAGC 1 cut(s) 7632
Bsp19I CCATGG 6 cut(s) 2106, 2820, 3388, 3987, 6144, 6372
BspDI ATCGAT 1 cut(s) 5659
BspEI TCCGGA 2 cut(s) 8170, 9540
BspFNI CGCG 5 cut(s) 279, 2901, 10378, 10524, 10914
BspHI TCATGA 2 cut(s) 1680, 3481
BspMAI CTGCAG 7 cut(s) 393, 1362, 2340, 4432, 5491, 8887, 11178
BspMI ACCTGC 9 cut(s) 202, 1724, 5129, 5425, 6968, 7214, 9094, 9123, 11181
BspQI GCTCTTC 4 cut(s) 267, 5837, 8651, 11152
BspT104I TTCGAA 2 cut(s) 955, 5840
BspT107I GGYRCC 4 cut(s) 3392, 5065, 7570, 10153
BsrBI CCGCTC 1 cut(s) 8069
BsrFI RCCGGY 3 cut(s) 2970, 7194, 8460
BsrGI TGTACA 4 cut(s) 5548, 8660, 9820, 11038
BssAI RCCGGY 3 cut(s) 2970, 7194, 8460
BssNAI GTATAC 2 cut(s) 5639, 10483
BssNI GRCGYC 1 cut(s) 6862
BssSI CACGAG 1 cut(s) 10817
Bst1107I GTATAC 2 cut(s) 5639, 10483
Bst2BI CACGAG 1 cut(s) 10817
BstACI GRCGYC 1 cut(s) 6862
BstAPI GCANNNNNTGC 3 cut(s) 2645, 4972, 11240
BstAUI TGTACA 4 cut(s) 5548, 8660, 9820, 11038
BstBAI YACGTR 3 cut(s) 1991, 5033, 6748
BstBI TTCGAA 2 cut(s) 955, 5840
BstDSI CCRYGG 9 cut(s) 24, 2106, 2820, 3388, 3987, 6144, 6372, 10157, 10632
BstEII GGTNACC 1 cut(s) 7097
BstENI CCTNNNNNAGG 7 cut(s) 102, 2788, 6804, 7221, 8593, 9119, 9172
BstFNI CGCG 5 cut(s) 279, 2901, 10378, 10524, 10914
BstH2I RGCGCY 2 cut(s) 3953, 7629
BstHHI GCGC 5 cut(s) 1974, 3952, 7284, 7628, 8122
BstMCI CGRYCG 1 cut(s) 9238
BstPAI GACNNNNGTC 3 cut(s) 1025, 2295, 11363
BstPI GGTNACC 1 cut(s) 7097
BstSLI GKGCMC 5 cut(s) 1003, 1432, 4051, 5032, 11317
BstUI CGCG 5 cut(s) 279, 2901, 10378, 10524, 10914
BstZ17I GTATAC 2 cut(s) 5639, 10483
Bsu15I ATCGAT 1 cut(s) 5659
Bsu36I CCTNAGG 2 cut(s) 7476, 8718
BsuI GTATCC 4 cut(s) 4321, 4645, 6973, 8947
BsuTUI ATCGAT 1 cut(s) 5659
BtgI CCRYGG 9 cut(s) 24, 2106, 2820, 3388, 3987, 6144, 6372, 10157, 10632
BtgZI GCGATG 2 cut(s) 876, 10064
BtrI CACGTC 2 cut(s) 2070, 2261
BtsI GCAGTG 8 cut(s) 66, 3847, 4201, 4970, 6229, 8892, 9087, 9459
BveI ACCTGC 9 cut(s) 202, 1724, 5129, 5425, 6968, 7214, 9094, 9123, 11181
CaiI CAGNNNCTG 8 cut(s) 397, 683, 1310, 1816, 2648, 5995, 9868, 11173
CciI TCATGA 2 cut(s) 1680, 3481
CfoI GCGC 5 cut(s) 1974, 3952, 7284, 7628, 8122
Cfr10I RCCGGY 3 cut(s) 2970, 7194, 8460
Cfr9I CCCGGG 2 cut(s) 4044, 6993
ClaI ATCGAT 1 cut(s) 5659
CpoI CGGWCCG 1 cut(s) 10235
CseI GACGC 4 cut(s) 52, 8681, 8828, 10289
CsiI ACCWGGT 3 cut(s) 5932, 9631, 10752
CspCI CAANNNNNGTGG 2 cut(s) 5445, 5480
CspI CGGWCCG 1 cut(s) 10235
DraI TTTAAA 5 cut(s) 102, 1630, 2025, 6115, 10510
DraIII CACNNNGTG 3 cut(s) 5012, 8669, 9693
DrdI GACNNNNNNGTC 1 cut(s) 6877
DseDI GACNNNNNNGTC 1 cut(s) 6877
EaeI YGGCCR 6 cut(s) 3984, 4749, 7192, 7210, 7900, 8500
Ecl136II GAGCTC 1 cut(s) 9777
Eco147I AGGCCT 2 cut(s) 6940, 7474
Eco24I GRGCYC 2 cut(s) 1003, 9779
Eco32I GATATC 2 cut(s) 4438, 7465
Eco47III AGCGCT 1 cut(s) 3951
Eco53kI GAGCTC 1 cut(s) 9777
Eco81I CCTNAGG 2 cut(s) 7476, 8718
Eco88I CYCGRG 4 cut(s) 2439, 2785, 4044, 6993
Eco91I GGTNACC 1 cut(s) 7097
EcoICRI GAGCTC 1 cut(s) 9777
EcoNI CCTNNNNNAGG 7 cut(s) 102, 2788, 6804, 7221, 8593, 9119, 9172
EcoO109I RGGNCCY 1 cut(s) 5621
EcoO65I GGTNACC 1 cut(s) 7097
EcoRI GAATTC 4 cut(s) 957, 7327, 9187, 9646
EcoRV GATATC 2 cut(s) 4438, 7465
EcoT22I ATGCAT 5 cut(s) 1622, 1805, 1873, 3804, 10099
EcoT38I GRGCYC 2 cut(s) 1003, 9779
FauI CCCGC 1 cut(s) 7128
FauNDI CATATG 2 cut(s) 331, 7069
FbaI TGATCA 8 cut(s) 3478, 4791, 5326, 6169, 6736, 7072, 8709, 10840
FblI GTMKAC 5 cut(s) 5638, 6835, 10482, 10827, 10966
FriOI GRGCYC 2 cut(s) 1003, 9779
FspI TGCGCA 1 cut(s) 7283
GlaI GCGC 5 cut(s) 1973, 3951, 7283, 7627, 8121
GsaI CCCAGC 3 cut(s) 3264, 4787, 9585
HaeII RGCGCY 2 cut(s) 3953, 7629
HgaI GACGC 4 cut(s) 52, 8681, 8828, 10289
HhaI GCGC 5 cut(s) 1974, 3952, 7284, 7628, 8122
Hin1I GRCGYC 1 cut(s) 6862
Hin6I GCGC 5 cut(s) 1972, 3950, 7282, 7626, 8120
HinP1I GCGC 5 cut(s) 1972, 3950, 7282, 7626, 8120
HincII GTYRAC 9 cut(s) 800, 2073, 3163, 4102, 7300, 7663, 7867, 8245, 9016
HindII GTYRAC 9 cut(s) 800, 2073, 3163, 4102, 7300, 7663, 7867, 8245, 9016
HindIII AAGCTT 4 cut(s) 1281, 4301, 5727, 10037
Hpy99I CGWCG 7 cut(s) 1512, 2925, 3351, 6864, 6867, 8844, 10260
Hsp92I GRCGYC 1 cut(s) 6862
HspAI GCGC 5 cut(s) 1972, 3950, 7282, 7626, 8120
Kpn2I TCCGGA 2 cut(s) 8170, 9540
KpnI GGTACC 1 cut(s) 3396
KroI GCCGGC 1 cut(s) 2970
KroNI GCCGGC 1 cut(s) 2972
Ksp22I TGATCA 8 cut(s) 3478, 4791, 5326, 6169, 6736, 7072, 8709, 10840
LguI GCTCTTC 4 cut(s) 267, 5837, 8651, 11152
MabI ACCWGGT 3 cut(s) 5932, 9631, 10752
MbiI CCGCTC 1 cut(s) 8069
MfeI CAATTG 4 cut(s) 3651, 7277, 8025, 8496
MlsI TGGCCA 3 cut(s) 3986, 7212, 7902
MluNI TGGCCA 3 cut(s) 3986, 7212, 7902
MmeI TCCRAC 8 cut(s) 5106, 5194, 8467, 8822, 9265, 9812, 10104, 10423
Mox20I TGGCCA 3 cut(s) 3986, 7212, 7902
Mph1103I ATGCAT 5 cut(s) 1622, 1805, 1873, 3804, 10099
MroI TCCGGA 2 cut(s) 8170, 9540
MroNI GCCGGC 1 cut(s) 2970
MroXI GAANNNNTTC 4 cut(s) 261, 430, 2577, 10905
MscI TGGCCA 3 cut(s) 3986, 7212, 7902
Msp20I TGGCCA 3 cut(s) 3986, 7212, 7902
MspA1I CMGCKG 8 cut(s) 1307, 1363, 3260, 4813, 5332, 6188, 9518, 10240
MunI CAATTG 4 cut(s) 3651, 7277, 8025, 8496
Mva1269I GAATGC 4 cut(s) 813, 3247, 10099, 10302
MvnI CGCG 5 cut(s) 279, 2901, 10378, 10524, 10914
NaeI GCCGGC 1 cut(s) 2972
NciI CCSGG 4 cut(s) 4045, 4046, 6994, 6995
NcoI CCATGG 6 cut(s) 2106, 2820, 3388, 3987, 6144, 6372
NdeI CATATG 2 cut(s) 331, 7069
NgoMIV GCCGGC 1 cut(s) 2970
NmeAIII GCCGAG 1 cut(s) 2911
NsbI TGCGCA 1 cut(s) 7283
NsiI ATGCAT 5 cut(s) 1622, 1805, 1873, 3804, 10099
NspV TTCGAA 2 cut(s) 955, 5840
OliI CACNNNNGTG 1 cut(s) 1265
PaeI GCATGC 2 cut(s) 1471, 8468
PagI TCATGA 2 cut(s) 1680, 3481
PaqCI CACCTGC 2 cut(s) 6968, 7214
PceI AGGCCT 2 cut(s) 6940, 7474
PciI ACATGT 3 cut(s) 4354, 4527, 7044
PciSI GCTCTTC 4 cut(s) 267, 5837, 8651, 11152
PctI GAATGC 4 cut(s) 813, 3247, 10099, 10302
PdiI GCCGGC 1 cut(s) 2972
PdmI GAANNNNTTC 4 cut(s) 261, 430, 2577, 10905
PflFI GACNNNGTC 1 cut(s) 6864
PflMI CCANNNNNTGG 4 cut(s) 3993, 6373, 7190, 9693
PfoI TCCNGGA 3 cut(s) 3766, 5623, 9853
Ppu21I YACGTR 3 cut(s) 1991, 5033, 6748
PpuMI RGGWCCY 1 cut(s) 5621
PscI ACATGT 3 cut(s) 4354, 4527, 7044
PshAI GACNNNNGTC 3 cut(s) 1025, 2295, 11363
PshBI ATTAAT 6 cut(s) 512, 1967, 3372, 5787, 8754, 10875
PsiI TTATAA 2 cut(s) 6648, 6935
Psp124BI GAGCTC 1 cut(s) 9779
Psp1406I AACGTT 1 cut(s) 3416
Psp5II RGGWCCY 1 cut(s) 5621
PspEI GGTNACC 1 cut(s) 7097
PspFI CCCAGC 3 cut(s) 3260, 4783, 9581
PspOMI GGGCCC 1 cut(s) 999
PspPPI RGGWCCY 1 cut(s) 5621
PsrI GAACNNNNNNTAC 2 cut(s) 5496, 5528
PstI CTGCAG 7 cut(s) 393, 1362, 2340, 4432, 5491, 8887, 11178
PstNI CAGNNNCTG 8 cut(s) 397, 683, 1310, 1816, 2648, 5995, 9868, 11173
PsyI GACNNNGTC 1 cut(s) 6864
PvuII CAGCTG 7 cut(s) 1307, 1363, 3260, 4813, 5332, 6188, 9518
Rsr2I CGGWCCG 1 cut(s) 10235
RsrII CGGWCCG 1 cut(s) 10235
SacI GAGCTC 1 cut(s) 9779
SapI GCTCTTC 4 cut(s) 267, 5837, 8651, 11152
ScaI AGTACT 1 cut(s) 2929
SexAI ACCWGGT 3 cut(s) 5932, 9631, 10752
SfuI TTCGAA 2 cut(s) 955, 5840
SmaI CCCGGG 2 cut(s) 4046, 6995
SpeI ACTAGT 3 cut(s) 910, 3428, 5999
SphI GCATGC 2 cut(s) 1471, 8468
SrfI GCCCGGGC 1 cut(s) 4046
SseBI AGGCCT 2 cut(s) 6940, 7474
SspI AATATT 4 cut(s) 4698, 6110, 9706, 9808
SstI GAGCTC 1 cut(s) 9779
StuI AGGCCT 2 cut(s) 6940, 7474
TauI GCSGC 5 cut(s) 1609, 1673, 6585, 8162, 10524
TspGWI ACGGA 7 cut(s) 1075, 4670, 5228, 10505, 10817, 11351, 11421
TspMI CCCGGG 2 cut(s) 4044, 6993
Tth111I GACNNNGTC 1 cut(s) 6864
Van91I CCANNNNNTGG 4 cut(s) 3993, 6373, 7190, 9693
VneI GTGCAC 3 cut(s) 1428, 5028, 11313
VspI ATTAAT 6 cut(s) 512, 1967, 3372, 5787, 8754, 10875
XagI CCTNNNNNAGG 7 cut(s) 102, 2788, 6804, 7221, 8593, 9119, 9172
XbaI TCTAGA 2 cut(s) 5078, 8566
XcmI CCANNNNNNNNNTGG 4 cut(s) 3916, 5009, 6626, 8768
XmaI CCCGGG 2 cut(s) 4044, 6993
XmiI GTMKAC 5 cut(s) 5638, 6835, 10482, 10827, 10966
XmnI GAANNNNTTC 4 cut(s) 261, 430, 2577, 10905
ZraI GACGTC 1 cut(s) 6863
ZrmI AGTACT 1 cut(s) 2929
Zsp2I ATGCAT 5 cut(s) 1622, 1805, 1873, 3804, 10099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.