Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17460 AT1G17460 AT1G17460 AT1G72650 AT1G72650 |
| fragaria_vesca | FvH4_6g34560 FvH4_6g34560 FvH4_6g34560 FvH4_6g34560 FvH4_6g34560 |
| malus_domestica | MD09G1184800.v1.1 MD17G1168700.v1.1 |
| prunus_persica | Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 |
| pyrus_communis | pycom09g10240 pycom17g16720 |
| rosa_chinensis | RchiOBHm_Chr2g0145091 |
| rosa_laevigata | RLG00000020124 |
| rosa_multiflora | Rmu_co8219288.1_g000001 Rmu_co8448595.1_g000001 Rmu_sc0027368.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00100880 |
| rosa_rugosa | Rorug02G0390200 Rorug02G0390200 Rorug02G0390300 Rorug02G0390300 Rorug02G0390300 Rorug02G0390300 |
| rosa_samantha | Rh2AG442900 Rh2BG453900 Rh2CG429900 Rh2DG463900 |
| rosa_wichuraiana | Rw2G036200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 1269 |
| AciI | CCGC | 2 cut(s) | 31, 1856 |
| AclWI | GGATC | 4 cut(s) | 74, 484, 555, 1243 |
| AcoI | YGGCCR | 1 cut(s) | 757 |
| AcsI | RAATTY | 2 cut(s) | 168, 1445 |
| AcuI | CTGAAG | 1 cut(s) | 342 |
| AfaI | GTAC | 4 cut(s) | 471, 834, 970, 1714 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 323, 1408, 1668 |
| AgeI | ACCGGT | 1 cut(s) | 1432 |
| AgsI | TTSAA | 6 cut(s) | 84, 353, 446, 993, 1085, 1753 |
| AhlI | ACTAGT | 1 cut(s) | 1633 |
| AjiI | CACGTC | 1 cut(s) | 786 |
| AjnI | CCWGG | 1 cut(s) | 1214 |
| Alw21I | GWGCWC | 1 cut(s) | 1518 |
| Alw26I | GTCTC | 3 cut(s) | 260, 1192, 1799 |
| AlwI | GGATC | 4 cut(s) | 74, 484, 555, 1243 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1834 |
| Aor13HI | TCCGGA | 1 cut(s) | 1269 |
| AoxI | GGCC | 1 cut(s) | 757 |
| ApeKI | GCWGC | 4 cut(s) | 659, 662, 1046, 1346 |
| ApoI | RAATTY | 2 cut(s) | 168, 1445 |
| AseI | ATTAAT | 1 cut(s) | 819 |
| AsiGI | ACCGGT | 1 cut(s) | 1432 |
| AspLEI | GCGC | 1 cut(s) | 1585 |
| AspS9I | GGNCC | 2 cut(s) | 28, 1435 |
| AsuC2I | CCSGG | 2 cut(s) | 125, 1663 |
| AsuHPI | GGTGA | 3 cut(s) | 707, 865, 1204 |
| AvaII | GGWCC | 2 cut(s) | 28, 1435 |
| AxyI | CCTNAGG | 1 cut(s) | 1192 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 756, 789 |
| BbsI | GAAGAC | 1 cut(s) | 1760 |
| Bbv12I | GWGCWC | 1 cut(s) | 1518 |
| BbvI | GCAGC | 4 cut(s) | 646, 649, 1033, 1358 |
| BccI | CCATC | 8 cut(s) | 131, 211, 601, 916, 970, 1213, 1381, 1498 |
| BceAI | ACGGC | 2 cut(s) | 744, 1263 |
| BciT130I | CCWGG | 1 cut(s) | 1216 |
| BciVI | GTATCC | 2 cut(s) | 321, 1234 |
| BclI | TGATCA | 2 cut(s) | 973, 1495 |
| BcnI | CCSGG | 2 cut(s) | 125, 1663 |
| BcoDI | GTCTC | 3 cut(s) | 260, 1192, 1799 |
| BcuI | ACTAGT | 1 cut(s) | 1633 |
| BfaI | CTAG | 6 cut(s) | 146, 633, 684, 1017, 1341, 1634 |
| BfmI | CTRYAG | 5 cut(s) | 222, 303, 498, 572, 1719 |
| BfuI | GTATCC | 2 cut(s) | 321, 1234 |
| BglII | AGATCT | 2 cut(s) | 699, 1723 |
| BisI | GCNGC | 4 cut(s) | 660, 663, 1047, 1347 |
| BlsI | GCNGC | 4 cut(s) | 661, 664, 1048, 1348 |
| BmcAI | AGTACT | 1 cut(s) | 970 |
| Bme1390I | CCNGG | 3 cut(s) | 125, 1216, 1663 |
| Bme18I | GGWCC | 2 cut(s) | 28, 1435 |
| BmgBI | CACGTC | 1 cut(s) | 786 |
| BmgT120I | GGNCC | 2 cut(s) | 28, 1435 |
| BmiI | GGNNCC | 3 cut(s) | 1251, 1509, 1660 |
| BmrFI | CCNGG | 3 cut(s) | 125, 1216, 1663 |
| BmrI | ACTGGG | 1 cut(s) | 1372 |
| BmsI | GCATC | 8 cut(s) | 280, 293, 474, 493, 605, 946, 1606, 1803 |
| BmuI | ACTGGG | 1 cut(s) | 1372 |
| BpiI | GAAGAC | 1 cut(s) | 1760 |
| BpuEI | CTTGAG | 4 cut(s) | 482, 868, 1712, 1781 |
| BpuMI | CCSGG | 2 cut(s) | 125, 1663 |
| BsaWI | WCCGGW | 2 cut(s) | 1269, 1432 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 918, 948, 1264, 1294 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 323, 1408, 1668 |
| Bse118I | RCCGGY | 1 cut(s) | 1432 |
| Bse1I | ACTGG | 5 cut(s) | 415, 514, 1032, 1320, 1378 |
| Bse21I | CCTNAGG | 1 cut(s) | 1192 |
| Bse3DI | GCAATG | 2 cut(s) | 58, 813 |
| BseAI | TCCGGA | 1 cut(s) | 1269 |
| BseBI | CCWGG | 1 cut(s) | 1216 |
| BseGI | GGATG | 5 cut(s) | 583, 1224, 1316, 1373, 1549 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 323, 1408, 1668 |
| BseMI | GCAATG | 2 cut(s) | 58, 813 |
| BseMII | CTCAG | 8 cut(s) | 71, 494, 1158, 1206, 1358, 1479, 1611, 1781 |
| BseNI | ACTGG | 5 cut(s) | 415, 514, 1032, 1320, 1378 |
| BseRI | GAGGAG | 3 cut(s) | 440, 557, 1180 |
| BseXI | GCAGC | 4 cut(s) | 646, 649, 1033, 1358 |
| BsgI | GTGCAG | 1 cut(s) | 1365 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1433 |
| BshFI | GGCC | 1 cut(s) | 759 |
| BshTI | ACCGGT | 1 cut(s) | 1432 |
| BsiEI | CGRYCG | 1 cut(s) | 1433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1518 |
| BsiSI | CCGG | 4 cut(s) | 124, 1270, 1433, 1662 |
| BslFI | GGGAC | 3 cut(s) | 328, 825, 1758 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 323, 1408, 1668 |
| BsmAI | GTCTC | 3 cut(s) | 260, 1192, 1799 |
| BsmBI | CGTCTC | 1 cut(s) | 260 |
| BsmFI | GGGAC | 3 cut(s) | 328, 825, 1758 |
| BsmI | GAATGC | 3 cut(s) | 385, 587, 910 |
| BsnI | GGCC | 1 cut(s) | 759 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1518 |
| Bsp13I | TCCGGA | 1 cut(s) | 1269 |
| Bsp1407I | TGTACA | 1 cut(s) | 469 |
| Bsp143I | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| BspACI | CCGC | 2 cut(s) | 31, 1856 |
| BspANI | GGCC | 1 cut(s) | 759 |
| BspCNI | CTCAG | 8 cut(s) | 70, 493, 1159, 1205, 1359, 1480, 1612, 1780 |
| BspEI | TCCGGA | 1 cut(s) | 1269 |
| BspLI | GGNNCC | 3 cut(s) | 1251, 1509, 1660 |
| BspMAI | CTGCAG | 2 cut(s) | 502, 576 |
| BspPI | GGATC | 4 cut(s) | 74, 484, 555, 1243 |
| BsrDI | GCAATG | 2 cut(s) | 58, 813 |
| BsrFI | RCCGGY | 1 cut(s) | 1432 |
| BsrGI | TGTACA | 1 cut(s) | 469 |
| BsrI | ACTGG | 5 cut(s) | 415, 514, 1032, 1320, 1378 |
| BssAI | RCCGGY | 1 cut(s) | 1432 |
| BssMI | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| Bst2UI | CCWGG | 1 cut(s) | 1216 |
| Bst4CI | ACNGT | 5 cut(s) | 10, 22, 772, 998, 1210 |
| Bst6I | CTCTTC | 2 cut(s) | 447, 1193 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 290, 656 |
| BstAUI | TGTACA | 1 cut(s) | 469 |
| BstC8I | GCNNGC | 2 cut(s) | 153, 1854 |
| BstEII | GGTNACC | 1 cut(s) | 308 |
| BstF5I | GGATG | 5 cut(s) | 583, 1224, 1316, 1373, 1549 |
| BstHHI | GCGC | 1 cut(s) | 1585 |
| BstKTI | GATC | 9 cut(s) | 69, 479, 550, 702, 976, 1147, 1238, 1498, 1726 |
| BstMAI | GTCTC | 3 cut(s) | 260, 1192, 1799 |
| BstMBI | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| BstMCI | CGRYCG | 1 cut(s) | 1433 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 290, 656, 1346, 1570 |
| BstNI | CCWGG | 1 cut(s) | 1216 |
| BstPI | GGTNACC | 1 cut(s) | 308 |
| BstSCI | CCNGG | 3 cut(s) | 123, 1214, 1661 |
| BstSFI | CTRYAG | 5 cut(s) | 222, 303, 498, 572, 1719 |
| BstV1I | GCAGC | 4 cut(s) | 646, 649, 1033, 1358 |
| BstV2I | GAAGAC | 1 cut(s) | 1760 |
| BstX2I | RGATCY | 4 cut(s) | 476, 699, 1235, 1723 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1327 |
| BstYI | RGATCY | 4 cut(s) | 476, 699, 1235, 1723 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1192 |
| BsuI | GTATCC | 2 cut(s) | 321, 1234 |
| BsuRI | GGCC | 1 cut(s) | 759 |
| BtrI | CACGTC | 1 cut(s) | 786 |
| BtsCI | GGATG | 5 cut(s) | 583, 1224, 1316, 1373, 1549 |
| BtsI | GCAGTG | 2 cut(s) | 728, 1393 |
| BtsIMutI | CAGTG | 6 cut(s) | 521, 728, 1039, 1134, 1189, 1393 |
| Cac8I | GCNNGC | 2 cut(s) | 153, 1854 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1834 |
| CfoI | GCGC | 1 cut(s) | 1585 |
| Cfr10I | RCCGGY | 1 cut(s) | 1432 |
| Cfr13I | GGNCC | 2 cut(s) | 28, 1435 |
| Csp6I | GTAC | 4 cut(s) | 470, 833, 969, 1713 |
| CspAI | ACCGGT | 1 cut(s) | 1432 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1767, 1802 |
| CviAII | CATG | 6 cut(s) | 473, 560, 977, 1265, 1570, 1805 |
| CviQI | GTAC | 4 cut(s) | 470, 833, 969, 1713 |
| DpnI | GATC | 9 cut(s) | 68, 478, 549, 701, 975, 1146, 1237, 1497, 1725 |
| DpnII | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| EaeI | YGGCCR | 1 cut(s) | 757 |
| Eam1104I | CTCTTC | 2 cut(s) | 447, 1193 |
| EarI | CTCTTC | 2 cut(s) | 447, 1193 |
| Eco47I | GGWCC | 2 cut(s) | 28, 1435 |
| Eco57I | CTGAAG | 1 cut(s) | 342 |
| Eco81I | CCTNAGG | 1 cut(s) | 1192 |
| Eco91I | GGTNACC | 1 cut(s) | 308 |
| EcoO65I | GGTNACC | 1 cut(s) | 308 |
| EcoRII | CCWGG | 1 cut(s) | 1214 |
| EcoT22I | ATGCAT | 3 cut(s) | 198, 279, 1818 |
| Esp3I | CGTCTC | 1 cut(s) | 260 |
| FaeI | CATG | 6 cut(s) | 476, 563, 980, 1268, 1573, 1808 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 444, 476, 1745, 1777 |
| FaqI | GGGAC | 3 cut(s) | 328, 825, 1758 |
| FatI | CATG | 6 cut(s) | 472, 559, 976, 1264, 1569, 1804 |
| FbaI | TGATCA | 2 cut(s) | 973, 1495 |
| Fnu4HI | GCNGC | 4 cut(s) | 660, 663, 1047, 1347 |
| FokI | GGATG | 5 cut(s) | 590, 1231, 1323, 1360, 1556 |
| Fsp4HI | GCNGC | 4 cut(s) | 660, 663, 1047, 1347 |
| FspBI | CTAG | 6 cut(s) | 146, 633, 684, 1017, 1341, 1634 |
| GlaI | GCGC | 1 cut(s) | 1584 |
| GluI | GCNGC | 4 cut(s) | 660, 663, 1047, 1347 |
| HaeIII | GGCC | 1 cut(s) | 759 |
| HapII | CCGG | 4 cut(s) | 124, 1270, 1433, 1662 |
| HhaI | GCGC | 1 cut(s) | 1585 |
| Hin1II | CATG | 6 cut(s) | 476, 563, 980, 1268, 1573, 1808 |
| Hin6I | GCGC | 1 cut(s) | 1583 |
| HinP1I | GCGC | 1 cut(s) | 1583 |
| HindIII | AAGCTT | 3 cut(s) | 116, 564, 1759 |
| HinfI | GANTC | 9 cut(s) | 142, 596, 1132, 1369, 1406, 1523, 1612, 1771, 1831 |
| HpaII | CCGG | 4 cut(s) | 124, 1270, 1433, 1662 |
| HphI | GGTGA | 3 cut(s) | 707, 865, 1204 |
| Hpy166II | GTNNAC | 3 cut(s) | 556, 1037, 1399 |
| Hpy188III | TCNNGA | 8 cut(s) | 132, 684, 881, 1270, 1428, 1499, 1530, 1798 |
| Hpy8I | GTNNAC | 3 cut(s) | 556, 1037, 1399 |
| HpyAV | CCTTC | 6 cut(s) | 317, 323, 342, 498, 1146, 1584 |
| HpyCH4III | ACNGT | 5 cut(s) | 10, 22, 772, 998, 1210 |
| HpyCH4IV | ACGT | 2 cut(s) | 785, 933 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 290, 656, 1346, 1570 |
| HpySE526I | ACGT | 2 cut(s) | 785, 933 |
| Hsp92II | CATG | 6 cut(s) | 476, 563, 980, 1268, 1573, 1808 |
| HspAI | GCGC | 1 cut(s) | 1583 |
| Kpn2I | TCCGGA | 1 cut(s) | 1269 |
| Ksp22I | TGATCA | 2 cut(s) | 973, 1495 |
| Kzo9I | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| LmnI | GCTCC | 5 cut(s) | 964, 1474, 1507, 1658, 1849 |
| Lsp1109I | GCAGC | 4 cut(s) | 646, 649, 1033, 1358 |
| LweI | GCATC | 8 cut(s) | 280, 293, 474, 493, 605, 946, 1606, 1803 |
| MaeI | CTAG | 6 cut(s) | 146, 633, 684, 1017, 1341, 1634 |
| MaeII | ACGT | 2 cut(s) | 785, 933 |
| MaeIII | GTNAC | 8 cut(s) | 308, 898, 1204, 1210, 1322, 1355, 1457, 1836 |
| MalI | GATC | 9 cut(s) | 68, 478, 549, 701, 975, 1146, 1237, 1497, 1725 |
| MboI | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| MboII | GAAGA | 9 cut(s) | 72, 176, 257, 464, 1086, 1097, 1210, 1343, 1765 |
| MflI | RGATCY | 4 cut(s) | 476, 699, 1235, 1723 |
| MhlI | GDGCHC | 1 cut(s) | 1518 |
| MluCI | AATT | 7 cut(s) | 168, 370, 712, 820, 870, 1242, 1445 |
| MlyI | GAGTC | 5 cut(s) | 151, 1378, 1517, 1606, 1780 |
| MmeI | TCCRAC | 1 cut(s) | 915 |
| Mph1103I | ATGCAT | 3 cut(s) | 198, 279, 1818 |
| MroI | TCCGGA | 1 cut(s) | 1269 |
| MseI | TTAA | 6 cut(s) | 723, 774, 792, 819, 869, 1382 |
| MslI | CAYNNNNRTG | 4 cut(s) | 191, 981, 1217, 1559 |
| MspA1I | CMGCKG | 1 cut(s) | 320 |
| MspI | CCGG | 4 cut(s) | 124, 1270, 1433, 1662 |
| MspR9I | CCNGG | 3 cut(s) | 125, 1216, 1663 |
| Mva1269I | GAATGC | 3 cut(s) | 385, 587, 910 |
| MvaI | CCWGG | 1 cut(s) | 1216 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 290, 656, 1346, 1570 |
| NciI | CCSGG | 2 cut(s) | 125, 1663 |
| NdeII | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| NlaIII | CATG | 6 cut(s) | 476, 563, 980, 1268, 1573, 1808 |
| NlaIV | GGNNCC | 3 cut(s) | 1251, 1509, 1660 |
| NmuCI | GTSAC | 3 cut(s) | 898, 1210, 1457 |
| NsiI | ATGCAT | 3 cut(s) | 198, 279, 1818 |
| PctI | GAATGC | 3 cut(s) | 385, 587, 910 |
| PfeI | GAWTC | 4 cut(s) | 596, 1132, 1406, 1831 |
| PflFI | GACNNNGTC | 1 cut(s) | 1615 |
| PinAI | ACCGGT | 1 cut(s) | 1432 |
| PkrI | GCNGC | 4 cut(s) | 661, 664, 1048, 1348 |
| PleI | GAGTC | 5 cut(s) | 150, 1377, 1517, 1606, 1779 |
| PpsI | GAGTC | 5 cut(s) | 150, 1377, 1517, 1606, 1779 |
| PshBI | ATTAAT | 1 cut(s) | 819 |
| Psp6I | CCWGG | 1 cut(s) | 1214 |
| PspEI | GGTNACC | 1 cut(s) | 308 |
| PspGI | CCWGG | 1 cut(s) | 1214 |
| PspN4I | GGNNCC | 3 cut(s) | 1251, 1509, 1660 |
| PspPI | GGNCC | 2 cut(s) | 28, 1435 |
| PstI | CTGCAG | 2 cut(s) | 502, 576 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1834 |
| PsuI | RGATCY | 4 cut(s) | 476, 699, 1235, 1723 |
| PsyI | GACNNNGTC | 1 cut(s) | 1615 |
| PvuII | CAGCTG | 1 cut(s) | 320 |
| RsaI | GTAC | 4 cut(s) | 471, 834, 970, 1714 |
| RsaNI | GTAC | 4 cut(s) | 470, 833, 969, 1713 |
| RseI | CAYNNNNRTG | 4 cut(s) | 191, 981, 1217, 1559 |
| SaqAI | TTAA | 6 cut(s) | 723, 774, 792, 819, 869, 1382 |
| SatI | GCNGC | 4 cut(s) | 660, 663, 1047, 1347 |
| Sau3AI | GATC | 9 cut(s) | 66, 476, 547, 699, 973, 1144, 1235, 1495, 1723 |
| Sau96I | GGNCC | 2 cut(s) | 28, 1435 |
| ScaI | AGTACT | 1 cut(s) | 970 |
| SchI | GAGTC | 5 cut(s) | 151, 1378, 1517, 1606, 1780 |
| ScrFI | CCNGG | 3 cut(s) | 125, 1216, 1663 |
| SduI | GDGCHC | 1 cut(s) | 1518 |
| SfaNI | GCATC | 8 cut(s) | 280, 293, 474, 493, 605, 946, 1606, 1803 |
| SfcI | CTRYAG | 5 cut(s) | 222, 303, 498, 572, 1719 |
| SinI | GGWCC | 2 cut(s) | 28, 1435 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 191, 981, 1217, 1559 |
| SmlI | CTYRAG | 4 cut(s) | 461, 847, 1727, 1796 |
| SmoI | CTYRAG | 4 cut(s) | 461, 847, 1727, 1796 |
| SpeI | ACTAGT | 1 cut(s) | 1633 |
| Sse9I | AATT | 7 cut(s) | 168, 370, 712, 820, 870, 1242, 1445 |
| SsiI | CCGC | 2 cut(s) | 31, 1856 |
| SspMI | CTAG | 6 cut(s) | 146, 633, 684, 1017, 1341, 1634 |
| StyD4I | CCNGG | 3 cut(s) | 123, 1214, 1661 |
| TaaI | ACNGT | 5 cut(s) | 10, 22, 772, 998, 1210 |
| TaiI | ACGT | 2 cut(s) | 788, 936 |
| TaqI | TCGA | 5 cut(s) | 261, 965, 1429, 1603, 1811 |
| TasI | AATT | 7 cut(s) | 168, 370, 712, 820, 870, 1242, 1445 |
| TatI | WGTACW | 2 cut(s) | 469, 968 |
| TfiI | GAWTC | 4 cut(s) | 596, 1132, 1406, 1831 |
| Tru1I | TTAA | 6 cut(s) | 723, 774, 792, 819, 869, 1382 |
| Tru9I | TTAA | 6 cut(s) | 723, 774, 792, 819, 869, 1382 |
| TscAI | CASTG | 6 cut(s) | 521, 735, 1039, 1134, 1189, 1393 |
| TseFI | GTSAC | 3 cut(s) | 898, 1210, 1457 |
| TseI | GCWGC | 4 cut(s) | 659, 662, 1046, 1346 |
| Tsp45I | GTSAC | 3 cut(s) | 898, 1210, 1457 |
| TspDTI | ATGAA | 9 cut(s) | 177, 258, 540, 576, 594, 605, 609, 965, 1686 |
| TspGWI | ACGGA | 1 cut(s) | 284 |
| TspRI | CASTG | 6 cut(s) | 521, 735, 1039, 1134, 1189, 1393 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1615 |
| VpaK11BI | GGWCC | 2 cut(s) | 28, 1435 |
| VspI | ATTAAT | 1 cut(s) | 819 |
| XapI | RAATTY | 2 cut(s) | 168, 1445 |
| XbaI | TCTAGA | 1 cut(s) | 683 |
| XspI | CTAG | 6 cut(s) | 146, 633, 684, 1017, 1341, 1634 |
| ZrmI | AGTACT | 1 cut(s) | 970 |
| Zsp2I | ATGCAT | 3 cut(s) | 198, 279, 1818 |