Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0003150

Physical Location & Seq

Genomic Coordinates Forward (+)

17145689 .. 17152312

Gene Structure 6624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1168700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGAAACAGTGGTTGGTGTTGAGGGGAATGATGAAGGGATGTGTGAGGAGAGTGGGGTTGAGAAAAGTAGCTCTTCGTTGTCTTCGCCAAAGCAGATTGCCGATCCTGTTGTATACAAGCTTGTTCGGGTTGAAGGTAATGGGAGATTAGTGCCAGCAACAGATGATGAAGTAATGGAAGTTGAGGATTTTCTTGTTGACGAAACAGTTGAATTACCTGTTGTTCCAGACGCTGGAAATGTTAGGTGCATTTCCAATGAAGAGTCTTCCTCTGGGAAACCTCAGAAAGAAAACTCAGAAGGTCTGTCACATTCAGAGAACACAGAAGCTGATGCAAAATTAAGTGCACGGCTTGAGGATATTGGTCCTCCATCATCACTGAGTCCAGATGGAAGTCATATTAATGAATCTGGGAGAATTGGGGAGTGCTCAAAACAACCGCCAGATGGATCAGCTTGTGTCATTTGCACTAGTTCAAAGCCTGATTTAAATACACTAAAGGGGGAGATATGCTTGGACAACCTATCAATTAGAGAACTTCATGAATTATTTCGGGCAACTTTTGGGAGAGAAACTACTGTTAAGGACAAGTTATGGCTTAAGAGGAGGATCACAATGGGATTGACTAACTCTTGTGATGTTTCAACCACAACTTTCACCATCGTAGATAACAACTTGGTGAAGAAGGGTAAAGACGATAGCATTCAGAATGCAGATGGTATGCTCACTGAGGGGTCTGATGGTGAAGCAAAGAATCATGGGTATGAAACTTCACCAACTAGCCACAGTAGCCAAGTTGAAAATCCTCACACTGTTTCGGGCAAGAGATTGGGAAACAGTAGTGTAGAACTTGATTGTGGAAGTGAGGATCTTCACACAGATCAGAGAGCTGCCAAACGAGTTCGGAAGCCCACTAAGAGATATATTGAAGAGCTTTCTGAAGTTGAATCAAAAGATTGTAGCCCAAAAGTGATTAGTCCAGTTAAAAATGCTGGACAAGGACAAACATCTCTAAAATCTTGTAGGCCTCTTGGAAATGTCCCTTTAAGTGAGAAAGCTACTGTCACCAGGTTGGACCCTCTTGGAAATGTGACAAATGTCCCTTCAAATGAGAGAACTTATGTCACCAGGTTGGACTCTCTTGGTGGATCAGGTGTTCAGGTTCCCTATGTTTCTCGAGTTCGTAGAAGCCGTCCAAGGAAAAATATTATGGCCCTTATGAAGTTCGACATGAGTGTAATGGGTGTGACAGCTAAACTTGTAAAAGAGGCCTTTAGTGTGCGTAGTTCGCTACCAGAGAGTGAGCATGCAGACAAAGTCTTGAAAACCAGATCTGCTTCTGAACAGATGAAATCACAGTTTACTGCTGAACCAGAGAAAGACAAGCGTCGCTCAGTAATGGGCACAATTGAACCGGATAAGAACATGGGCATGAAGCAGACAGATTCATCGGAGGACAATTCAGATGATGGTACAGCCCAGATTCCCACAGCAAAAGGTGGAATGAGAAGGAAACACCATCGAGCTTGGACTCTTGTTGAGGTTATAAAATTAGTAGAGGGTGTGTCTAAGTGTGGCACTGGTAGGTGGTCTGAGATCAAAAGGCTTTCCTTTGCATCGTATTCATATCGCACTTCTGTTGATCTCAAGGACAAGTGGAGAAACCTGCTGAAAGCTAGCTTTGCGCAAACGCCTCCTGATGATGGAATAAACTCCCGGAAACATGCTTCAGTACCCATCCCGGCATCAATTTTGTTGAAAGTAAGAGAGCTTGCTGAGATGCACGCGCAGGTACCGCCAAATCTAGGGCCGAGCAAGCCGGCCAGTGTTAGTCGAAGCGTGCATCAAATGAGACCAGGCTTCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_6 Myb_DNA-binding

Protein Analysis

623

Amino Acids

67.89

Weight (kDa)

6.71

Isoelectric Point (pI)

48.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	508 - 557	2.9e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003150)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17460 AT1G17460 AT1G17460 AT1G72650 AT1G72650
fragaria_vesca	FvH4_6g34560 FvH4_6g34560 FvH4_6g34560 FvH4_6g34560 FvH4_6g34560
malus_domestica	MD09G1184800.v1.1 MD17G1168700.v1.1
prunus_persica	Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1 Prupe.3G042900_v2.0.a1
pyrus_communis	pycom09g10240 pycom17g16720
rosa_chinensis	RchiOBHm_Chr2g0145091
rosa_laevigata	RLG00000020124
rosa_multiflora	Rmu_co8219288.1_g000001 Rmu_co8448595.1_g000001 Rmu_sc0027368.1_g000001
rosa_roxburghii	Rroxscaffold_2G00100880
rosa_rugosa	Rorug02G0390200 Rorug02G0390200 Rorug02G0390300 Rorug02G0390300 Rorug02G0390300 Rorug02G0390300
rosa_samantha	Rh2AG442900 Rh2BG453900 Rh2CG429900 Rh2DG463900
rosa_wichuraiana	Rw2G036200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1547
Acc16I	TGCGCA	1 cut(s)	1686
Acc36I	ACCTGC	2 cut(s)	1674, 1780
Acc65I	GGTACC	1 cut(s)	1792
AccB1I	GGYRCC	1 cut(s)	1792
AccB7I	CCANNNNNTGG	1 cut(s)	233
AccI	GTMKAC	1 cut(s)	114
AccII	CGCG	1 cut(s)	1787
AciI	CCGC	2 cut(s)	440, 1796
AclWI	GGATC	5 cut(s)	98, 457, 617, 876, 1156
AcoI	YGGCCR	1 cut(s)	1821
AcuI	CTGAAG	2 cut(s)	960, 1713
AfaI	GTAC	3 cut(s)	1474, 1734, 1794
AfiI	CCNNNNNNNGG	4 cut(s)	233, 446, 1703, 1805
AflII	CTTAAG	1 cut(s)	599
AhlI	ACTAGT	1 cut(s)	470
AjnI	CCWGG	3 cut(s)	1067, 1127, 1855
AjuI	GAANNNNNNNTTGG	1 cut(s)	29
AloI	GAACNNNNNNTCC	2 cut(s)	1140, 1172
Alw21I	GWGCWC	2 cut(s)	349, 431
Alw26I	GTCTC	1 cut(s)	1846
Alw44I	GTGCAC	1 cut(s)	345
AlwI	GGATC	5 cut(s)	98, 457, 617, 876, 1156
AlwNI	CAGNNNCTG	2 cut(s)	233, 329
Ama87I	CYCGRG	1 cut(s)	1176
AoxI	GGCC	5 cut(s)	1025, 1212, 1269, 1808, 1821
ApaLI	GTGCAC	1 cut(s)	345
ApeKI	GCWGC	1 cut(s)	890
AseI	ATTAAT	1 cut(s)	402
Asp700I	GAANNNNTTC	1 cut(s)	549
Asp718I	GGTACC	1 cut(s)	1792
AspLEI	GCGC	2 cut(s)	1687, 1789
AspS9I	GGNCC	4 cut(s)	365, 1075, 1213, 1808
AsuC2I	CCSGG	2 cut(s)	1717, 1742
AsuHPI	GGTGA	6 cut(s)	649, 691, 755, 765, 1057, 1117
AsuNHI	GCTAGC	1 cut(s)	1676
AvaI	CYCGRG	1 cut(s)	1176
AvaII	GGWCC	2 cut(s)	365, 1075
BaeGI	GKGCMC	2 cut(s)	349, 1406
BanI	GGYRCC	1 cut(s)	1792
BbsI	GAAGAC	2 cut(s)	75, 258
Bbv12I	GWGCWC	2 cut(s)	349, 431
BbvI	GCAGC	1 cut(s)	877
BceAI	ACGGC	2 cut(s)	365, 1176
BciT130I	CCWGG	3 cut(s)	1069, 1129, 1857
BcnI	CCSGG	2 cut(s)	1717, 1742
BcoDI	GTCTC	1 cut(s)	1846
BcuI	ACTAGT	1 cut(s)	470
BfaI	CTAG	4 cut(s)	471, 780, 1677, 1805
BfrI	CTTAAG	1 cut(s)	599
BfuAI	ACCTGC	2 cut(s)	1674, 1780
BglII	AGATCT	1 cut(s)	1331
BisI	GCNGC	1 cut(s)	891
BlsI	GCNGC	1 cut(s)	892
Bme1390I	CCNGG	5 cut(s)	1069, 1129, 1717, 1742, 1857
Bme18I	GGWCC	2 cut(s)	365, 1075
BmeT110I	CYCGRG	1 cut(s)	1176
BmgT120I	GGNCC	4 cut(s)	365, 1075, 1213, 1808
BmiI	GGNNCC	3 cut(s)	1077, 1164, 1794
BmrFI	CCNGG	5 cut(s)	1069, 1129, 1717, 1742, 1857
BmsI	GCATC	5 cut(s)	322, 1625, 1754, 1770, 1852
BmtI	GCTAGC	1 cut(s)	1680
BoxI	GACNNNNGTC	2 cut(s)	1097, 1386
BpiI	GAAGAC	2 cut(s)	75, 258
BplI	GAGNNNNNCTC	2 cut(s)	254, 286
BpuEI	CTTGAG	2 cut(s)	374, 1631
BpuMI	CCSGG	2 cut(s)	1717, 1742
BsaI	GGTCTC	1 cut(s)	1846
BsaJI	CCNNGG	1 cut(s)	1196
BsaWI	WCCGGW	1 cut(s)	1414
Bsc4I	CCNNNNNNNGG	4 cut(s)	233, 446, 1703, 1805
Bse118I	RCCGGY	1 cut(s)	1819
Bse1I	ACTGG	3 cut(s)	980, 1585, 1824
BseBI	CCWGG	3 cut(s)	1069, 1129, 1857
BseDI	CCNNGG	1 cut(s)	1196
BseGI	GGATG	2 cut(s)	45, 1737
BseLI	CCNNNNNNNGG	4 cut(s)	233, 446, 1703, 1805
BseMII	CTCAG	7 cut(s)	296, 309, 371, 720, 1407, 1584, 1767
BseNI	ACTGG	3 cut(s)	980, 1585, 1824
BseRI	GAGGAG	2 cut(s)	62, 619
BseSI	GKGCMC	2 cut(s)	349, 1406
BseXI	GCAGC	1 cut(s)	877
Bsh1236I	CGCG	1 cut(s)	1787
BshFI	GGCC	5 cut(s)	1027, 1214, 1271, 1810, 1823
BshNI	GGYRCC	1 cut(s)	1792
BsiHKAI	GWGCWC	2 cut(s)	349, 431
BsiHKCI	CYCGRG	1 cut(s)	1176
BsiSI	CCGG	4 cut(s)	1415, 1717, 1742, 1820
BslFI	GGGAC	2 cut(s)	1025, 1085
BslI	CCNNNNNNNGG	4 cut(s)	233, 446, 1703, 1805
BsmAI	GTCTC	1 cut(s)	1846
BsmFI	GGGAC	2 cut(s)	1025, 1085
BsmI	GAATGC	2 cut(s)	702, 715
BsnI	GGCC	5 cut(s)	1027, 1214, 1271, 1810, 1823
Bso31I	GGTCTC	1 cut(s)	1846
BsoBI	CYCGRG	1 cut(s)	1176
Bsp1286I	GDGCHC	3 cut(s)	349, 431, 1406
Bsp143I	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
BspACI	CCGC	2 cut(s)	440, 1796
BspANI	GGCC	5 cut(s)	1027, 1214, 1271, 1810, 1823
BspCNI	CTCAG	7 cut(s)	295, 308, 372, 721, 1406, 1585, 1768
BspFNI	CGCG	1 cut(s)	1787
BspHI	TCATGA	1 cut(s)	541
BspLI	GGNNCC	3 cut(s)	1077, 1164, 1794
BspMI	ACCTGC	2 cut(s)	1674, 1780
BspOI	GCTAGC	1 cut(s)	1680
BspPI	GGATC	5 cut(s)	98, 457, 617, 876, 1156
BspQI	GCTCTTC	2 cut(s)	79, 924
BspT107I	GGYRCC	1 cut(s)	1792
BspTI	CTTAAG	1 cut(s)	599
BspTNI	GGTCTC	1 cut(s)	1846
BsrFI	RCCGGY	1 cut(s)	1819
BsrI	ACTGG	3 cut(s)	980, 1585, 1824
BssAI	RCCGGY	1 cut(s)	1819
BssECI	CCNNGG	1 cut(s)	1196
BssMI	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
BssNAI	GTATAC	1 cut(s)	115
BssT1I	CCWWGG	1 cut(s)	1196
Bst1107I	GTATAC	1 cut(s)	115
Bst2UI	CCWGG	3 cut(s)	1069, 1129, 1857
Bst4CI	ACNGT	8 cut(s)	10, 208, 580, 788, 814, 839, 1063, 1359
Bst6I	CTCTTC	3 cut(s)	79, 255, 924
BstAFI	CTTAAG	1 cut(s)	599
BstC8I	GCNNGC	8 cut(s)	156, 1308, 1678, 1773, 1785, 1817, 1821, 1841
BstDEI	CTNAG	9 cut(s)	282, 295, 380, 729, 915, 1393, 1569, 1593, 1776
BstF5I	GGATG	2 cut(s)	45, 1737
BstFNI	CGCG	1 cut(s)	1787
BstHHI	GCGC	2 cut(s)	1687, 1789
BstKTI	GATC	9 cut(s)	106, 452, 612, 871, 883, 1151, 1334, 1599, 1645
BstMAI	GTCTC	1 cut(s)	1846
BstMBI	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
BstMWI	GCNNNNNNNGC	5 cut(s)	789, 1288, 1682, 1795, 1816
BstNI	CCWGG	3 cut(s)	1069, 1129, 1857
BstNSI	RCATGY	2 cut(s)	1310, 1727
BstPAI	GACNNNNGTC	2 cut(s)	1097, 1386
BstSCI	CCNGG	5 cut(s)	1067, 1127, 1715, 1740, 1855
BstSLI	GKGCMC	2 cut(s)	349, 1406
BstUI	CGCG	1 cut(s)	1787
BstV1I	GCAGC	1 cut(s)	877
BstV2I	GAAGAC	2 cut(s)	75, 258
BstX2I	RGATCY	2 cut(s)	868, 1331
BstYI	RGATCY	2 cut(s)	868, 1331
BstZ17I	GTATAC	1 cut(s)	115
BsuRI	GGCC	5 cut(s)	1027, 1214, 1271, 1810, 1823
BtsCI	GGATG	2 cut(s)	45, 1737
BtsIMutI	CAGTG	6 cut(s)	15, 377, 726, 810, 1578, 1831
BveI	ACCTGC	2 cut(s)	1674, 1780
Cac8I	GCNNGC	8 cut(s)	156, 1308, 1678, 1773, 1785, 1817, 1821, 1841
CaiI	CAGNNNCTG	2 cut(s)	233, 329
CciI	TCATGA	1 cut(s)	541
CfoI	GCGC	2 cut(s)	1687, 1789
Cfr10I	RCCGGY	1 cut(s)	1819
Cfr13I	GGNCC	4 cut(s)	365, 1075, 1213, 1808
CseI	GACGC	2 cut(s)	239, 1376
CsiI	ACCWGGT	2 cut(s)	1067, 1127
Csp6I	GTAC	3 cut(s)	1473, 1733, 1793
CviAII	CATG	7 cut(s)	542, 758, 1231, 1307, 1426, 1432, 1724
CviQI	GTAC	3 cut(s)	1473, 1733, 1793
DdeI	CTNAG	9 cut(s)	282, 295, 380, 729, 915, 1393, 1569, 1593, 1776
DpnI	GATC	9 cut(s)	105, 451, 611, 870, 882, 1150, 1333, 1598, 1644
DpnII	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
DraI	TTTAAA	1 cut(s)	489
EaeI	YGGCCR	1 cut(s)	1821
Eam1104I	CTCTTC	3 cut(s)	79, 255, 924
EarI	CTCTTC	3 cut(s)	79, 255, 924
Eco130I	CCWWGG	1 cut(s)	1196
Eco147I	AGGCCT	2 cut(s)	1027, 1271
Eco31I	GGTCTC	1 cut(s)	1846
Eco47I	GGWCC	2 cut(s)	365, 1075
Eco57I	CTGAAG	2 cut(s)	960, 1713
Eco88I	CYCGRG	1 cut(s)	1176
EcoRII	CCWGG	3 cut(s)	1067, 1127, 1855
EcoT14I	CCWWGG	1 cut(s)	1196
ErhI	CCWWGG	1 cut(s)	1196
FaeI	CATG	7 cut(s)	545, 761, 1234, 1310, 1429, 1435, 1727
FalI	AAGNNNNNCTT	2 cut(s)	58, 90
FaqI	GGGAC	2 cut(s)	1025, 1085
FatI	CATG	7 cut(s)	541, 757, 1230, 1306, 1425, 1431, 1723
FblI	GTMKAC	1 cut(s)	114
Fnu4HI	GCNGC	1 cut(s)	891
FokI	GGATG	2 cut(s)	52, 1724
Fsp4HI	GCNGC	1 cut(s)	891
FspBI	CTAG	4 cut(s)	471, 780, 1677, 1805
FspI	TGCGCA	1 cut(s)	1686
GlaI	GCGC	2 cut(s)	1686, 1788
GluI	GCNGC	1 cut(s)	891
HaeIII	GGCC	5 cut(s)	1027, 1214, 1271, 1810, 1823
HapII	CCGG	4 cut(s)	1415, 1717, 1742, 1820
HgaI	GACGC	2 cut(s)	239, 1376
HhaI	GCGC	2 cut(s)	1687, 1789
Hin1II	CATG	7 cut(s)	545, 761, 1234, 1310, 1429, 1435, 1727
Hin6I	GCGC	2 cut(s)	1685, 1787
HinP1I	GCGC	2 cut(s)	1685, 1787
HincII	GTYRAC	1 cut(s)	199
HindII	GTYRAC	1 cut(s)	199
HindIII	AAGCTT	1 cut(s)	119
HinfI	GANTC	9 cut(s)	263, 382, 407, 754, 947, 1136, 1445, 1483, 1531
HpaII	CCGG	4 cut(s)	1415, 1717, 1742, 1820
HphI	GGTGA	6 cut(s)	649, 691, 755, 765, 1057, 1117
Hpy166II	GTNNAC	4 cut(s)	115, 199, 347, 1362
Hpy188III	TCNNGA	6 cut(s)	227, 386, 542, 1176, 1321, 1697
Hpy8I	GTNNAC	4 cut(s)	115, 199, 347, 1362
Hpy99I	CGWCG	1 cut(s)	1392
HpyAV	CCTTC	6 cut(s)	29, 128, 293, 679, 1113, 1503
HpyCH4III	ACNGT	8 cut(s)	10, 208, 580, 788, 814, 839, 1063, 1359
HpyCH4V	TGCA	9 cut(s)	249, 335, 347, 468, 713, 1310, 1616, 1783, 1843
HpyF10VI	GCNNNNNNNGC	5 cut(s)	789, 1288, 1682, 1795, 1816
HpyF3I	CTNAG	9 cut(s)	282, 295, 380, 729, 915, 1393, 1569, 1593, 1776
Hsp92II	CATG	7 cut(s)	545, 761, 1234, 1310, 1429, 1435, 1727
HspAI	GCGC	2 cut(s)	1685, 1787
KpnI	GGTACC	1 cut(s)	1796
KroI	GCCGGC	1 cut(s)	1819
KroNI	GCCGGC	1 cut(s)	1821
Kzo9I	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
LguI	GCTCTTC	2 cut(s)	79, 924
Lsp1109I	GCAGC	1 cut(s)	877
LweI	GCATC	5 cut(s)	322, 1625, 1754, 1770, 1852
MabI	ACCWGGT	2 cut(s)	1067, 1127
MaeI	CTAG	4 cut(s)	471, 780, 1677, 1805
MaeIII	GTNAC	5 cut(s)	306, 1063, 1090, 1123, 1246
MalI	GATC	9 cut(s)	105, 451, 611, 870, 882, 1150, 1333, 1598, 1644
MboI	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
MboII	GAAGA	7 cut(s)	66, 75, 258, 272, 694, 863, 941
MfeI	CAATTG	1 cut(s)	1407
MflI	RGATCY	2 cut(s)	868, 1331
MhlI	GDGCHC	3 cut(s)	349, 431, 1406
MluCI	AATT	9 cut(s)	212, 338, 417, 528, 545, 1407, 1459, 1550, 1749
MlyI	GAGTC	4 cut(s)	272, 391, 1130, 1525
MmeI	TCCRAC	2 cut(s)	1053, 1113
MroNI	GCCGGC	1 cut(s)	1819
MroXI	GAANNNNTTC	1 cut(s)	549
MseI	TTAA	7 cut(s)	341, 402, 488, 582, 600, 984, 1046
MslI	CAYNNNNRTG	3 cut(s)	402, 762, 1430
MspCI	CTTAAG	1 cut(s)	599
MspI	CCGG	4 cut(s)	1415, 1717, 1742, 1820
MspR9I	CCNGG	5 cut(s)	1069, 1129, 1717, 1742, 1857
MunI	CAATTG	1 cut(s)	1407
Mva1269I	GAATGC	2 cut(s)	702, 715
MvaI	CCWGG	3 cut(s)	1069, 1129, 1857
MvnI	CGCG	1 cut(s)	1787
MwoI	GCNNNNNNNGC	5 cut(s)	789, 1288, 1682, 1795, 1816
NaeI	GCCGGC	1 cut(s)	1821
NciI	CCSGG	2 cut(s)	1717, 1742
NdeII	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
NgoMIV	GCCGGC	1 cut(s)	1819
NheI	GCTAGC	1 cut(s)	1676
NlaIII	CATG	7 cut(s)	545, 761, 1234, 1310, 1429, 1435, 1727
NlaIV	GGNNCC	3 cut(s)	1077, 1164, 1794
NmeAIII	GCCGAG	1 cut(s)	1836
NmuCI	GTSAC	5 cut(s)	306, 1063, 1090, 1123, 1246
NsbI	TGCGCA	1 cut(s)	1686
NspI	RCATGY	2 cut(s)	1310, 1727
PaeI	GCATGC	1 cut(s)	1310
PaeR7I	CTCGAG	1 cut(s)	1176
PagI	TCATGA	1 cut(s)	541
PceI	AGGCCT	2 cut(s)	1027, 1271
PciSI	GCTCTTC	2 cut(s)	79, 924
PcsI	WCGNNNNNNNCGW	1 cut(s)	1189
PctI	GAATGC	2 cut(s)	702, 715
PdiI	GCCGGC	1 cut(s)	1821
PdmI	GAANNNNTTC	1 cut(s)	549
PfeI	GAWTC	5 cut(s)	407, 754, 947, 1445, 1483
PflFI	GACNNNGTC	1 cut(s)	1316
PflMI	CCANNNNNTGG	1 cut(s)	233
PfoI	TCCNGGA	1 cut(s)	1715
PkrI	GCNGC	1 cut(s)	892
PleI	GAGTC	4 cut(s)	271, 390, 1130, 1525
PpsI	GAGTC	4 cut(s)	271, 390, 1130, 1525
PshAI	GACNNNNGTC	2 cut(s)	1097, 1386
PshBI	ATTAAT	1 cut(s)	402
PsiI	TTATAA	1 cut(s)	1547
Psp6I	CCWGG	3 cut(s)	1067, 1127, 1855
PspGI	CCWGG	3 cut(s)	1067, 1127, 1855
PspN4I	GGNNCC	3 cut(s)	1077, 1164, 1794
PspPI	GGNCC	4 cut(s)	365, 1075, 1213, 1808
PstNI	CAGNNNCTG	2 cut(s)	233, 329
PsuI	RGATCY	2 cut(s)	868, 1331
PsyI	GACNNNGTC	1 cut(s)	1316
RsaI	GTAC	3 cut(s)	1474, 1734, 1794
RsaNI	GTAC	3 cut(s)	1473, 1733, 1793
RseI	CAYNNNNRTG	3 cut(s)	402, 762, 1430
SapI	GCTCTTC	2 cut(s)	79, 924
SaqAI	TTAA	7 cut(s)	341, 402, 488, 582, 600, 984, 1046
SatI	GCNGC	1 cut(s)	891
Sau3AI	GATC	9 cut(s)	103, 449, 609, 868, 880, 1148, 1331, 1596, 1642
Sau96I	GGNCC	4 cut(s)	365, 1075, 1213, 1808
SchI	GAGTC	4 cut(s)	272, 391, 1130, 1525
ScrFI	CCNGG	5 cut(s)	1069, 1129, 1717, 1742, 1857
SduI	GDGCHC	3 cut(s)	349, 431, 1406
SexAI	ACCWGGT	2 cut(s)	1067, 1127
SfaNI	GCATC	5 cut(s)	322, 1625, 1754, 1770, 1852
Sfr274I	CTCGAG	1 cut(s)	1176
SinI	GGWCC	2 cut(s)	365, 1075
SlaI	CTCGAG	1 cut(s)	1176
SmiI	ATTTAAAT	1 cut(s)	489
SmiMI	CAYNNNNRTG	3 cut(s)	402, 762, 1430
SmlI	CTYRAG	4 cut(s)	353, 599, 1176, 1646
SmoI	CTYRAG	4 cut(s)	353, 599, 1176, 1646
SpeI	ACTAGT	1 cut(s)	470
SphI	GCATGC	1 cut(s)	1310
Sse9I	AATT	9 cut(s)	212, 338, 417, 528, 545, 1407, 1459, 1550, 1749
SseBI	AGGCCT	2 cut(s)	1027, 1271
SsiI	CCGC	2 cut(s)	440, 1796
SspI	AATATT	1 cut(s)	1207
SspMI	CTAG	4 cut(s)	471, 780, 1677, 1805
StuI	AGGCCT	2 cut(s)	1027, 1271
StyD4I	CCNGG	5 cut(s)	1067, 1127, 1715, 1740, 1855
StyI	CCWWGG	1 cut(s)	1196
SwaI	ATTTAAAT	1 cut(s)	489
TaaI	ACNGT	8 cut(s)	10, 208, 580, 788, 814, 839, 1063, 1359
TaqI	TCGA	4 cut(s)	1177, 1227, 1522, 1834
TasI	AATT	9 cut(s)	212, 338, 417, 528, 545, 1407, 1459, 1550, 1749
TfiI	GAWTC	5 cut(s)	407, 754, 947, 1445, 1483
Tru1I	TTAA	7 cut(s)	341, 402, 488, 582, 600, 984, 1046
Tru9I	TTAA	7 cut(s)	341, 402, 488, 582, 600, 984, 1046
TscAI	CASTG	6 cut(s)	15, 384, 733, 817, 1585, 1831
TseFI	GTSAC	5 cut(s)	306, 1063, 1090, 1123, 1246
TseI	GCWGC	1 cut(s)	890
Tsp45I	GTSAC	5 cut(s)	306, 1063, 1090, 1123, 1246
TspRI	CASTG	6 cut(s)	15, 384, 733, 817, 1585, 1831
Tth111I	GACNNNGTC	1 cut(s)	1316
Van91I	CCANNNNNTGG	1 cut(s)	233
Vha464I	CTTAAG	1 cut(s)	599
VneI	GTGCAC	1 cut(s)	345
VpaK11BI	GGWCC	2 cut(s)	365, 1075
VspI	ATTAAT	1 cut(s)	402
XceI	RCATGY	2 cut(s)	1310, 1727
XhoI	CTCGAG	1 cut(s)	1176
XmiI	GTMKAC	1 cut(s)	114
XmnI	GAANNNNTTC	1 cut(s)	549
XspI	CTAG	4 cut(s)	471, 780, 1677, 1805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.