AT1G73320

Lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011305
Physical Location & Seq
Reverse (-)
27565394 .. 27567222
1829 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G73320.1

Sequence Viewer

Length: 951 bp
ATGTTTGGTCCGTCGATGCACATGGAAGCAGCAGAGATAGTCCATTCGGCGGCGCGTTTTGAAGCTGAGAAAATGGGCAAGGAGGATGAGGCGGTGGAGGAGATACGACGTATGAGTGGTTACGGCGGAGATGTGATAGTAGTAGGTGGGTTTCCGGCGTCGGAGTCGGAATCTGAATCTGAATCCGATTTGGCGGCGGCGGAGATTATGGTTATATGGGCTATTCAAGGGCCAACTTCTTTTGCTCCAAACACACTCGTTGCTCAATCTTCTCTTGAGCTGCGTCTCGACGCTTGTGGCCACTCACTCTCTATTCTCCAGTCGCCATGTTCATTGAACACGCCTGGAGTAACCGGGTCAGTGATGTGGGACAGTGGAGTGGTGCTAGGGAAGTTCTTAGAACATTCTGTTGACTCTAAGGTTCTTTCTCTTGAAGGCAAGAAAATCGTCGAGTTGGGTTCTGGCTGTGGCTTAGTTGGTTGTATAGCAGCACTTTTGGGAGGCAATGCTGTCCTCACTGATCTTCCAGATAGACTGAGGCTACTCAAAAAGAACATCCAAACCAATTTGCACCGTGGGAACACGCGTGGATCTGCTATTGTGCAGGAACTTGTTTGGGGAGATGACCCTGATCCAGATTTGATCGAACCATTCCCTGATTACGTATTAGGCTCAGATGTTATATACAGCGAAGAAGCTGTTCACCATTTGGTAAAAACGCTTTTGCAACTTTGCAGCGATCAAACTACAATCTTCCTATCAGGAGAACTACGAAATGATGCTGTTCTTGAGTACTTCTTAGAAACCGCACTGAAAGATTTTGCGATCGGGCGTGTGGAACAAACACAATGGCATCCAGATTATCGCAGCCATCGAGTAGTGCTTTACGTTCTTGAAAAGAAGTCGAAGAGATGCCTCGCTGATGAATCTTCGCTTAATCAATCTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

316

Amino Acids

34.37

Weight (kDa)

4.78

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 118 - 266 3.5e-33 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011305)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73320 AT1G73320
fragaria_vesca FvH4_5g18590 FvH4_5g18590 FvH4_5g18590 FvH4_5g18590
malus_domestica MD06G1241200.v1.1
prunus_persica Prupe.5G245300_v2.0.a1
pyrus_communis pycom06g21630
rosa_chinensis RchiOBHm_Chr7g0176921
rosa_laevigata RLG00000005573
rosa_multiflora Rmu_sc0020732.1_g000001
rosa_roxburghii Rroxscaffold_3G00276290
rosa_rugosa Rorug06G0401800 Rorug06G0401900
rosa_samantha Rh7AG001400 Rh7BG001700 Rh7CG001200 Rh7DG001500
rosa_wichuraiana Rw7G000100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 55, 586
AciI CCGC 7 cut(s) 50, 92, 126, 194, 197, 200, 807
AclWI GGATC 2 cut(s) 598, 626
AcoI YGGCCR 1 cut(s) 298
AcyI GRCGYC 1 cut(s) 158
AfaI GTAC 1 cut(s) 794
AfiI CCNNNNNNNGG 1 cut(s) 49
AflIII ACRYGT 1 cut(s) 584
AgsI TTSAA 5 cut(s) 62, 227, 337, 434, 896
AjnI CCWGG 1 cut(s) 343
AluBI AGCT 3 cut(s) 65, 280, 698
AluI AGCT 3 cut(s) 65, 280, 698
Alw26I GTCTC 1 cut(s) 290
AlwI GGATC 2 cut(s) 598, 626
AoxI GGCC 2 cut(s) 230, 298
ApeKI GCWGC 5 cut(s) 29, 280, 488, 735, 867
Asp700I GAANNNNTTC 1 cut(s) 699
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 2 cut(s) 8, 230
AsuC2I CCSGG 1 cut(s) 355
AsuHPI GGTGA 1 cut(s) 695
AvaII GGWCC 1 cut(s) 8
BalI TGGCCA 1 cut(s) 300
BbvI GCAGC 5 cut(s) 41, 267, 500, 747, 879
BccI CCATC 1 cut(s) 879
BceAI ACGGC 1 cut(s) 139
BcgI CGANNNNNNTGC 2 cut(s) 427, 461
BciT130I CCWGG 1 cut(s) 345
BcnI CCSGG 1 cut(s) 355
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 1 cut(s) 386
BisI GCNGC 8 cut(s) 30, 51, 195, 198, 281, 489, 736, 868
BlsI GCNGC 8 cut(s) 31, 52, 196, 199, 282, 490, 737, 869
BmcAI AGTACT 1 cut(s) 794
Bme1390I CCNGG 2 cut(s) 345, 355
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 2 cut(s) 8, 230
BmrFI CCNGG 2 cut(s) 345, 355
BmsI GCATC 4 cut(s) 6, 769, 862, 902
BpmI CTGGAG 2 cut(s) 302, 366
BpuEI CTTGAG 2 cut(s) 296, 809
BpuMI CCSGG 1 cut(s) 355
BsaAI YACGTR 1 cut(s) 664
BsaHI GRCGYC 1 cut(s) 158
BsaJI CCNNGG 1 cut(s) 574
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse1I ACTGG 1 cut(s) 319
Bse3DI GCAATG 1 cut(s) 511
BseBI CCWGG 1 cut(s) 345
BseDI CCNNGG 1 cut(s) 574
BseGI GGATG 3 cut(s) 91, 555, 853
BseLI CCNNNNNNNGG 1 cut(s) 49
BseMI GCAATG 1 cut(s) 511
BseMII CTCAG 3 cut(s) 57, 527, 687
BseNI ACTGG 1 cut(s) 319
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 5 cut(s) 41, 267, 500, 747, 879
BsgI GTGCAG 1 cut(s) 623
Bsh1236I CGCG 2 cut(s) 55, 586
Bsh1285I CGRYCG 1 cut(s) 828
BshFI GGCC 2 cut(s) 232, 300
BsiEI CGRYCG 1 cut(s) 828
BsiSI CCGG 2 cut(s) 155, 354
BslFI GGGAC 1 cut(s) 383
BslI CCNNNNNNNGG 1 cut(s) 49
BsmAI GTCTC 1 cut(s) 290
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 383
BsnI GGCC 2 cut(s) 232, 300
Bsp143I GATC 6 cut(s) 520, 590, 631, 642, 739, 825
BspACI CCGC 7 cut(s) 50, 92, 126, 194, 197, 200, 807
BspANI GGCC 2 cut(s) 232, 300
BspCNI CTCAG 3 cut(s) 58, 528, 686
BspFNI CGCG 2 cut(s) 55, 586
BspPI GGATC 2 cut(s) 598, 626
BsrDI GCAATG 1 cut(s) 511
BsrI ACTGG 1 cut(s) 319
BssECI CCNNGG 1 cut(s) 574
BssMI GATC 6 cut(s) 520, 590, 631, 642, 739, 825
BssNI GRCGYC 1 cut(s) 158
Bst2UI CCWGG 1 cut(s) 345
Bst4CI ACNGT 2 cut(s) 374, 575
Bst6I CTCTTC 1 cut(s) 902
BstACI GRCGYC 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 664
BstDEI CTNAG 7 cut(s) 66, 397, 417, 472, 536, 673, 799
BstDSI CCRYGG 1 cut(s) 574
BstF5I GGATG 3 cut(s) 91, 555, 853
BstFNI CGCG 2 cut(s) 55, 586
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 6 cut(s) 523, 593, 634, 645, 742, 828
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 6 cut(s) 520, 590, 631, 642, 739, 825
BstMCI CGRYCG 1 cut(s) 828
BstNI CCWGG 1 cut(s) 345
BstSCI CCNGG 2 cut(s) 343, 353
BstSNI TACGTA 1 cut(s) 664
BstUI CGCG 2 cut(s) 55, 586
BstV1I GCAGC 5 cut(s) 41, 267, 500, 747, 879
BstX2I RGATCY 1 cut(s) 590
BstYI RGATCY 1 cut(s) 590
BsuRI GGCC 2 cut(s) 232, 300
BtgI CCRYGG 1 cut(s) 574
BtsCI GGATG 3 cut(s) 91, 555, 853
BtsIMutI CAGTG 4 cut(s) 366, 379, 516, 809
CfoI GCGC 1 cut(s) 55
Cfr13I GGNCC 2 cut(s) 8, 230
CseI GACGC 3 cut(s) 147, 272, 299
Csp6I GTAC 1 cut(s) 793
CviAII CATG 2 cut(s) 22, 327
CviQI GTAC 1 cut(s) 793
DdeI CTNAG 7 cut(s) 66, 397, 417, 472, 536, 673, 799
DpnI GATC 6 cut(s) 522, 592, 633, 644, 741, 827
DpnII GATC 6 cut(s) 520, 590, 631, 642, 739, 825
EaeI YGGCCR 1 cut(s) 298
Eam1104I CTCTTC 1 cut(s) 902
EarI CTCTTC 1 cut(s) 902
EciI GGCGGA 2 cut(s) 141, 215
Eco105I TACGTA 1 cut(s) 664
Eco47I GGWCC 1 cut(s) 8
EcoRII CCWGG 1 cut(s) 343
Esp3I CGTCTC 1 cut(s) 290
FaeI CATG 2 cut(s) 25, 330
FaiI YATR 9 cut(s) 23, 113, 209, 215, 217, 328, 485, 683, 685
FaqI GGGAC 1 cut(s) 383
FatI CATG 2 cut(s) 21, 326
Fnu4HI GCNGC 8 cut(s) 30, 51, 195, 198, 281, 489, 736, 868
FokI GGATG 3 cut(s) 98, 542, 840
Fsp4HI GCNGC 8 cut(s) 30, 51, 195, 198, 281, 489, 736, 868
FspBI CTAG 1 cut(s) 386
GlaI GCGC 1 cut(s) 54
GluI GCNGC 8 cut(s) 30, 51, 195, 198, 281, 489, 736, 868
GsuI CTGGAG 2 cut(s) 302, 366
HaeIII GGCC 2 cut(s) 232, 300
HapII CCGG 2 cut(s) 155, 354
HgaI GACGC 3 cut(s) 147, 272, 299
HhaI GCGC 1 cut(s) 55
Hin1I GRCGYC 1 cut(s) 158
Hin1II CATG 2 cut(s) 25, 330
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HinfI GANTC 6 cut(s) 164, 170, 176, 182, 413, 926
HpaII CCGG 2 cut(s) 155, 354
HphI GGTGA 1 cut(s) 695
Hpy166II GTNNAC 2 cut(s) 412, 703
Hpy188I TCNGA 6 cut(s) 163, 169, 175, 181, 187, 676
Hpy188III TCNNGA 9 cut(s) 275, 287, 431, 527, 635, 762, 788, 857, 893
Hpy8I GTNNAC 2 cut(s) 412, 703
Hpy99I CGWCG 5 cut(s) 16, 111, 163, 293, 452
HpyAV CCTTC 1 cut(s) 428
HpyCH4III ACNGT 2 cut(s) 374, 575
HpyCH4IV ACGT 3 cut(s) 109, 663, 888
HpyCH4V TGCA 5 cut(s) 19, 571, 604, 727, 735
HpyF3I CTNAG 7 cut(s) 66, 397, 417, 472, 536, 673, 799
HpySE526I ACGT 3 cut(s) 109, 663, 888
Hsp92I GRCGYC 1 cut(s) 158
Hsp92II CATG 2 cut(s) 25, 330
HspAI GCGC 1 cut(s) 53
Kzo9I GATC 6 cut(s) 520, 590, 631, 642, 739, 825
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 5 cut(s) 41, 267, 500, 747, 879
LweI GCATC 4 cut(s) 6, 769, 862, 902
MaeI CTAG 1 cut(s) 386
MaeII ACGT 3 cut(s) 109, 663, 888
MaeIII GTNAC 2 cut(s) 119, 349
MalI GATC 6 cut(s) 522, 592, 633, 644, 741, 827
MboI GATC 6 cut(s) 520, 590, 631, 642, 739, 825
MboII GAAGA 6 cut(s) 261, 515, 704, 745, 919, 921
MflI RGATCY 1 cut(s) 590
MlsI TGGCCA 1 cut(s) 300
MluCI AATT 1 cut(s) 565
MluI ACGCGT 1 cut(s) 584
MluNI TGGCCA 1 cut(s) 300
MlyI GAGTC 2 cut(s) 173, 407
MmeI TCCRAC 2 cut(s) 141, 147
MnlI CCTC 7 cut(s) 76, 82, 91, 494, 524, 531, 926
Mox20I TGGCCA 1 cut(s) 300
MroXI GAANNNNTTC 1 cut(s) 699
MscI TGGCCA 1 cut(s) 300
MseI TTAA 1 cut(s) 936
Msp20I TGGCCA 1 cut(s) 300
MspI CCGG 2 cut(s) 155, 354
MspR9I CCNGG 2 cut(s) 345, 355
MvaI CCWGG 1 cut(s) 345
MvnI CGCG 2 cut(s) 55, 586
NciI CCSGG 1 cut(s) 355
NdeII GATC 6 cut(s) 520, 590, 631, 642, 739, 825
NlaIII CATG 2 cut(s) 25, 330
PcsI WCGNNNNNNNCGW 1 cut(s) 871
PdmI GAANNNNTTC 1 cut(s) 699
PfeI GAWTC 4 cut(s) 170, 176, 182, 926
PkrI GCNGC 8 cut(s) 31, 52, 196, 199, 282, 490, 737, 869
Ple19I CGATCG 1 cut(s) 828
PleI GAGTC 2 cut(s) 172, 407
PpsI GAGTC 2 cut(s) 172, 407
Ppu21I YACGTR 1 cut(s) 664
Psp6I CCWGG 1 cut(s) 343
PspGI CCWGG 1 cut(s) 343
PspPI GGNCC 2 cut(s) 8, 230
PsuI RGATCY 1 cut(s) 590
PvuI CGATCG 1 cut(s) 828
RsaI GTAC 1 cut(s) 794
RsaNI GTAC 1 cut(s) 793
SaqAI TTAA 1 cut(s) 936
SatI GCNGC 8 cut(s) 30, 51, 195, 198, 281, 489, 736, 868
Sau3AI GATC 6 cut(s) 520, 590, 631, 642, 739, 825
Sau96I GGNCC 2 cut(s) 8, 230
ScaI AGTACT 1 cut(s) 794
SchI GAGTC 2 cut(s) 173, 407
ScrFI CCNGG 2 cut(s) 345, 355
SetI ASST 8 cut(s) 67, 112, 148, 282, 423, 666, 700, 891
SfaNI GCATC 4 cut(s) 6, 769, 862, 902
SinI GGWCC 1 cut(s) 8
SmlI CTYRAG 2 cut(s) 275, 788
SmoI CTYRAG 2 cut(s) 275, 788
SnaBI TACGTA 1 cut(s) 664
Sse9I AATT 1 cut(s) 565
SsiI CCGC 7 cut(s) 50, 92, 126, 194, 197, 200, 807
SspMI CTAG 1 cut(s) 386
StyD4I CCNGG 2 cut(s) 343, 353
TaaI ACNGT 2 cut(s) 374, 575
TaiI ACGT 3 cut(s) 112, 666, 891
TaqI TCGA 6 cut(s) 14, 288, 450, 645, 874, 905
TasI AATT 1 cut(s) 565
TatI WGTACW 1 cut(s) 792
TauI GCSGC 3 cut(s) 53, 197, 200
TfiI GAWTC 4 cut(s) 170, 176, 182, 926
Tru1I TTAA 1 cut(s) 936
Tru9I TTAA 1 cut(s) 936
TscAI CASTG 4 cut(s) 366, 379, 523, 816
TseI GCWGC 5 cut(s) 29, 280, 488, 735, 867
TspDTI ATGAA 2 cut(s) 321, 939
TspRI CASTG 4 cut(s) 366, 379, 523, 816
VpaK11BI GGWCC 1 cut(s) 8
XmnI GAANNNNTTC 1 cut(s) 699
XspI CTAG 1 cut(s) 386
ZrmI AGTACT 1 cut(s) 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.