Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009028

Physical Location & Seq

Genomic Coordinates Reverse (-)

28009465 .. 28012634

Gene Structure 3170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G74530.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGGCGACATCGACAACGTCTGCGATTAGGGCACCGAATTGGAGAACCGCTGTGTTGTTCTGGACCATCTCTCTCACTATCTTCTACTCTCTTTTCCAAATGGGTATTCGAAATTCGCCATCCACTTCATCTCCTTCATCAGATTCCTTTGTCTCCTATGCGGAGCAAAGTACTAGGTTGTACAATAAGATGGAACAGGATTTACAAGAAAACGGACCCGTGTTTCTTAAACAAGGTGAAACGTCTCAGTCATTGTCACTTTCAGATCTCTTCACACTGAAAGATGGAAAGATAGCACCTGTCCTTAAGGTTGCGAATCCCCCTGTGCGAGCTAATGTATTACATCTCAGCACAGAATACTCTGTCCCAGTCTTGGAAGTCGTAAAAAATGTGTTCAGTCCTTACTTCGAAAATACAATTTGGTTTCAGGACTCTAAGATGTACCACTTCAGCATGTTTCATGCATCGAATCACATTTTCTCTGTTCCAGCTACTGAAGTTGAGGTTGAAGCAGAAGCAGCTGCTGTTAAAGCAGTTGCTAAAGAGCTTTGCCCTTTGGAGATTATCTTGGATAGAGTTCTATTAACCTCGACTGGTGTTCTTCTTGGATGCTGGAAGGTTAATTCTGGAGATGACCCCATAACAATCCGCTTGAAACTGAGATCTGTTCTTCCACGTGCACCGGAGAAGCAACTTTATGATGCTGCAATTCTTCATACATCATTGGCAAGACTGCTTGGTCCACCAATATCTCCAACTGAGGCTGGTTCTGACGACCATCTCCAGCTTCTCCATGAGTTGGTCACAAGACTAAACAACCAAATCCGAGGATTCAAGGTAAAACTTCCAACAAAAGCAAAGTTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

289

Amino Acids

32.12

Weight (kDa)

7.79

Isoelectric Point (pI)

49.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74530 AT1G74530 AT1G74530 AT1G74530
fragaria_vesca	FvH4_5g15170
malus_domestica	MD06G1191700.v1.1 MD14G1198100.v1.1
prunus_persica	Prupe.5G190900_v2.0.a1
pyrus_communis	pycom06g16980 pycom14g16450
rosa_chinensis	RchiOBHm_Chr7g0181011
rosa_laevigata	RLG00000005219
rosa_multiflora	Rmu_sc0004056.1_g000001 Rmu_sc0028417.1_g000001 Rmu_sc0036091.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272340
rosa_rugosa	Rorug06G0438500
rosa_samantha	Rh7AG039700 Rh7BG039100 Rh7CG040900 Rh7DG039300
rosa_wichuraiana	Rw7G003270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	738
AccB1I	GGYRCC	1 cut(s)	31
AccB7I	CCANNNNNTGG	1 cut(s)	799
AciI	CCGC	3 cut(s)	48, 161, 649
AcsI	RAATTY	1 cut(s)	112
AcuI	CTGAAG	2 cut(s)	433, 516
AcvI	CACGTG	1 cut(s)	677
AfaI	GTAC	3 cut(s)	172, 182, 443
AfiI	CCNNNNNNNGG	2 cut(s)	373, 799
AflII	CTTAAG	1 cut(s)	305
AgsI	TTSAA	3 cut(s)	509, 655, 835
AjuI	GAANNNNNNNTTGG	2 cut(s)	90, 122
AluBI	AGCT	5 cut(s)	332, 491, 521, 547, 787
AluI	AGCT	5 cut(s)	332, 491, 521, 547, 787
Alw21I	GWGCWC	1 cut(s)	682
Alw26I	GTCTC	2 cut(s)	157, 249
Alw44I	GTGCAC	1 cut(s)	678
AlwNI	CAGNNNCTG	2 cut(s)	494, 524
ApaLI	GTGCAC	1 cut(s)	678
ApeKI	GCWGC	3 cut(s)	518, 521, 704
ApoI	RAATTY	1 cut(s)	112
AspS9I	GGNCC	3 cut(s)	63, 215, 740
AsuHPI	GGTGA	1 cut(s)	248
AsuII	TTCGAA	2 cut(s)	109, 408
AvaII	GGWCC	3 cut(s)	63, 215, 740
BaeGI	GKGCMC	2 cut(s)	34, 682
BanI	GGYRCC	1 cut(s)	31
BbrPI	CACGTG	1 cut(s)	677
Bbv12I	GWGCWC	1 cut(s)	682
BbvI	GCAGC	3 cut(s)	508, 530, 691
BccI	CCATC	5 cut(s)	74, 127, 184, 278, 786
BcoDI	GTCTC	2 cut(s)	157, 249
BfaI	CTAG	1 cut(s)	174
BfrI	CTTAAG	1 cut(s)	305
BglII	AGATCT	2 cut(s)	265, 662
BisI	GCNGC	3 cut(s)	519, 522, 705
BlsI	GCNGC	3 cut(s)	520, 523, 706
BmcAI	AGTACT	1 cut(s)	172
Bme18I	GGWCC	3 cut(s)	63, 215, 740
BmgT120I	GGNCC	3 cut(s)	63, 215, 740
BmiI	GGNNCC	2 cut(s)	33, 217
BmrI	ACTGGG	1 cut(s)	362
BmsI	GCATC	3 cut(s)	473, 599, 691
BmuI	ACTGGG	1 cut(s)	362
BpmI	CTGGAG	2 cut(s)	648, 767
Bpu14I	TTCGAA	2 cut(s)	109, 408
BsaAI	YACGTR	1 cut(s)	677
BsaJI	CCNNGG	1 cut(s)	826
BsaWI	WCCGGW	1 cut(s)	682
BsaXI	ACNNNNNCTCC	2 cut(s)	115, 145
Bsc4I	CCNNNNNNNGG	2 cut(s)	373, 799
Bse1I	ACTGG	2 cut(s)	368, 598
BseDI	CCNNGG	1 cut(s)	826
BseGI	GGATG	2 cut(s)	119, 614
BseLI	CCNNNNNNNGG	2 cut(s)	373, 799
BseMII	CTCAG	4 cut(s)	260, 361, 650, 750
BseNI	ACTGG	2 cut(s)	368, 598
BseSI	GKGCMC	2 cut(s)	34, 682
BseXI	GCAGC	3 cut(s)	508, 530, 691
BshNI	GGYRCC	1 cut(s)	31
BsiHKAI	GWGCWC	1 cut(s)	682
BsiSI	CCGG	1 cut(s)	683
BslFI	GGGAC	1 cut(s)	350
BslI	CCNNNNNNNGG	2 cut(s)	373, 799
BsmAI	GTCTC	2 cut(s)	157, 249
BsmBI	CGTCTC	1 cut(s)	249
BsmFI	GGGAC	1 cut(s)	350
Bsp119I	TTCGAA	2 cut(s)	109, 408
Bsp1286I	GDGCHC	2 cut(s)	34, 682
Bsp1407I	TGTACA	1 cut(s)	180
Bsp143I	GATC	2 cut(s)	265, 662
BspACI	CCGC	3 cut(s)	48, 161, 649
BspCNI	CTCAG	4 cut(s)	259, 360, 651, 751
BspLI	GGNNCC	2 cut(s)	33, 217
BspT104I	TTCGAA	2 cut(s)	109, 408
BspT107I	GGYRCC	1 cut(s)	31
BspTI	CTTAAG	1 cut(s)	305
BsrGI	TGTACA	1 cut(s)	180
BsrI	ACTGG	2 cut(s)	368, 598
BssECI	CCNNGG	1 cut(s)	826
BssMI	GATC	2 cut(s)	265, 662
Bst6I	CTCTTC	1 cut(s)	275
BstAFI	CTTAAG	1 cut(s)	305
BstAUI	TGTACA	1 cut(s)	180
BstBAI	YACGTR	1 cut(s)	677
BstBI	TTCGAA	2 cut(s)	109, 408
BstC8I	GCNNGC	1 cut(s)	330
BstDEI	CTNAG	5 cut(s)	246, 347, 435, 659, 759
BstF5I	GGATG	2 cut(s)	119, 614
BstKTI	GATC	2 cut(s)	268, 665
BstMAI	GTCTC	2 cut(s)	157, 249
BstMBI	GATC	2 cut(s)	265, 662
BstMWI	GCNNNNNNNGC	3 cut(s)	29, 518, 530
BstNSI	RCATGY	1 cut(s)	457
BstSLI	GKGCMC	2 cut(s)	34, 682
BstV1I	GCAGC	3 cut(s)	508, 530, 691
BstX2I	RGATCY	2 cut(s)	265, 662
BstYI	RGATCY	2 cut(s)	265, 662
BtsCI	GGATG	2 cut(s)	119, 614
BtsIMutI	CAGTG	1 cut(s)	275
Cac8I	GCNNGC	1 cut(s)	330
CaiI	CAGNNNCTG	2 cut(s)	494, 524
Cfr13I	GGNCC	3 cut(s)	63, 215, 740
Csp6I	GTAC	3 cut(s)	171, 181, 442
CviAII	CATG	3 cut(s)	454, 461, 794
CviJI	RGCY	6 cut(s)	332, 491, 521, 547, 764, 787
CviKI_1	RGCY	6 cut(s)	332, 491, 521, 547, 764, 787
CviQI	GTAC	3 cut(s)	171, 181, 442
DdeI	CTNAG	5 cut(s)	246, 347, 435, 659, 759
DpnI	GATC	2 cut(s)	267, 664
DpnII	GATC	2 cut(s)	265, 662
DrdI	GACNNNNNNGTC	1 cut(s)	738
DseDI	GACNNNNNNGTC	1 cut(s)	738
Eam1104I	CTCTTC	1 cut(s)	275
EarI	CTCTTC	1 cut(s)	275
Eco47I	GGWCC	3 cut(s)	63, 215, 740
Eco57I	CTGAAG	2 cut(s)	433, 516
Eco72I	CACGTG	1 cut(s)	677
EcoT22I	ATGCAT	1 cut(s)	466
Esp3I	CGTCTC	1 cut(s)	249
FaeI	CATG	3 cut(s)	457, 464, 797
FaiI	YATR	7 cut(s)	159, 455, 462, 641, 699, 717, 795
FaqI	GGGAC	1 cut(s)	350
FatI	CATG	3 cut(s)	453, 460, 793
Fnu4HI	GCNGC	3 cut(s)	519, 522, 705
FokI	GGATG	2 cut(s)	106, 621
Fsp4HI	GCNGC	3 cut(s)	519, 522, 705
FspBI	CTAG	1 cut(s)	174
GluI	GCNGC	3 cut(s)	519, 522, 705
GsuI	CTGGAG	2 cut(s)	648, 767
HapII	CCGG	1 cut(s)	683
Hin1II	CATG	3 cut(s)	457, 464, 797
HinfI	GANTC	5 cut(s)	143, 316, 431, 469, 831
HpaII	CCGG	1 cut(s)	683
HphI	GGTGA	1 cut(s)	248
Hpy166II	GTNNAC	2 cut(s)	680, 743
Hpy188I	TCNGA	4 cut(s)	142, 265, 772, 827
Hpy188III	TCNNGA	4 cut(s)	61, 428, 627, 867
Hpy8I	GTNNAC	2 cut(s)	680, 743
HpyAV	CCTTC	2 cut(s)	144, 610
HpyCH4IV	ACGT	3 cut(s)	17, 242, 676
HpyCH4V	TGCA	3 cut(s)	464, 680, 707
HpyF10VI	GCNNNNNNNGC	3 cut(s)	29, 518, 530
HpyF3I	CTNAG	5 cut(s)	246, 347, 435, 659, 759
HpySE526I	ACGT	3 cut(s)	17, 242, 676
Hsp92II	CATG	3 cut(s)	457, 464, 797
Kzo9I	GATC	2 cut(s)	265, 662
LmnI	GCTCC	1 cut(s)	163
Lsp1109I	GCAGC	3 cut(s)	508, 530, 691
LweI	GCATC	3 cut(s)	473, 599, 691
MaeI	CTAG	1 cut(s)	174
MaeII	ACGT	3 cut(s)	17, 242, 676
MaeIII	GTNAC	2 cut(s)	255, 802
MalI	GATC	2 cut(s)	267, 664
MboI	GATC	2 cut(s)	265, 662
MboII	GAAGA	5 cut(s)	73, 262, 593, 662, 704
MflI	RGATCY	2 cut(s)	265, 662
MhlI	GDGCHC	2 cut(s)	34, 682
MluCI	AATT	5 cut(s)	37, 112, 417, 622, 708
MlyI	GAGTC	1 cut(s)	425
MmeI	TCCRAC	1 cut(s)	779
MnlI	CCTC	4 cut(s)	496, 598, 754, 821
Mph1103I	ATGCAT	1 cut(s)	466
MseI	TTAA	5 cut(s)	228, 306, 528, 584, 621
MspA1I	CMGCKG	2 cut(s)	50, 521
MspCI	CTTAAG	1 cut(s)	305
MspI	CCGG	1 cut(s)	683
MwoI	GCNNNNNNNGC	3 cut(s)	29, 518, 530
NdeII	GATC	2 cut(s)	265, 662
NlaIII	CATG	3 cut(s)	457, 464, 797
NlaIV	GGNNCC	2 cut(s)	33, 217
NmuCI	GTSAC	2 cut(s)	255, 802
NsiI	ATGCAT	1 cut(s)	466
NspI	RCATGY	1 cut(s)	457
NspV	TTCGAA	2 cut(s)	109, 408
PfeI	GAWTC	4 cut(s)	143, 316, 469, 831
PflFI	GACNNNGTC	1 cut(s)	16
PflMI	CCANNNNNTGG	1 cut(s)	799
PkrI	GCNGC	3 cut(s)	520, 523, 706
PleI	GAGTC	1 cut(s)	425
PmaCI	CACGTG	1 cut(s)	677
PmlI	CACGTG	1 cut(s)	677
PpsI	GAGTC	1 cut(s)	425
Ppu21I	YACGTR	1 cut(s)	677
PspCI	CACGTG	1 cut(s)	677
PspN4I	GGNNCC	2 cut(s)	33, 217
PspPI	GGNCC	3 cut(s)	63, 215, 740
PsrI	GAACNNNNNNTAC	2 cut(s)	186, 218
PstNI	CAGNNNCTG	2 cut(s)	494, 524
PsuI	RGATCY	2 cut(s)	265, 662
PsyI	GACNNNGTC	1 cut(s)	16
PvuII	CAGCTG	1 cut(s)	521
RsaI	GTAC	3 cut(s)	172, 182, 443
RsaNI	GTAC	3 cut(s)	171, 181, 442
SaqAI	TTAA	5 cut(s)	228, 306, 528, 584, 621
SatI	GCNGC	3 cut(s)	519, 522, 705
Sau3AI	GATC	2 cut(s)	265, 662
Sau96I	GGNCC	3 cut(s)	63, 215, 740
ScaI	AGTACT	1 cut(s)	172
SchI	GAGTC	1 cut(s)	425
SduI	GDGCHC	2 cut(s)	34, 682
SfaNI	GCATC	3 cut(s)	473, 599, 691
SfuI	TTCGAA	2 cut(s)	109, 408
SinI	GGWCC	3 cut(s)	63, 215, 740
SmlI	CTYRAG	1 cut(s)	305
SmoI	CTYRAG	1 cut(s)	305
Sse9I	AATT	5 cut(s)	37, 112, 417, 622, 708
SsiI	CCGC	3 cut(s)	48, 161, 649
SspMI	CTAG	1 cut(s)	174
TaiI	ACGT	3 cut(s)	20, 245, 679
TaqI	TCGA	5 cut(s)	11, 109, 408, 467, 590
TasI	AATT	5 cut(s)	37, 112, 417, 622, 708
TatI	WGTACW	2 cut(s)	170, 180
TfiI	GAWTC	4 cut(s)	143, 316, 469, 831
Tru1I	TTAA	5 cut(s)	228, 306, 528, 584, 621
Tru9I	TTAA	5 cut(s)	228, 306, 528, 584, 621
TscAI	CASTG	1 cut(s)	282
TseFI	GTSAC	2 cut(s)	255, 802
TseI	GCWGC	3 cut(s)	518, 521, 704
Tsp45I	GTSAC	2 cut(s)	255, 802
TspDTI	ATGAA	4 cut(s)	117, 126, 449, 704
TspGWI	ACGGA	1 cut(s)	228
TspRI	CASTG	1 cut(s)	282
Tth111I	GACNNNGTC	1 cut(s)	16
Van91I	CCANNNNNTGG	1 cut(s)	799
Vha464I	CTTAAG	1 cut(s)	305
VneI	GTGCAC	1 cut(s)	678
VpaK11BI	GGWCC	3 cut(s)	63, 215, 740
XapI	RAATTY	1 cut(s)	112
XceI	RCATGY	1 cut(s)	457
XspI	CTAG	1 cut(s)	174
ZrmI	AGTACT	1 cut(s)	172
Zsp2I	ATGCAT	1 cut(s)	466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.