AT1G80360

aminotransferase class I and II family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
30208408 .. 30211592
3185 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G80360.2

Sequence Viewer

Length: 1185 bp
ATGGGTTCGTTTGGGATGCTTTCGAGGAGAACGTTGGGCACTGATATGCCCGTCATGGCTCAGATTCGGAGTTTGATGGCGGAATTGACGAACCCCATGTCTCTCGCCCAGGGAGTGGTGCATTGGCAGCCTCCTCAAAAGGCCTTAGAGAAGGTCAAGGAGCTTGTCTGGGATCCTATCATTAGTTCTTATGGCCCCGATGAAGGTCTTCCCGAGTTGAGACAGGCTCTTCTCAAAAAGCTGCGTGAAGAAAACAAGCTAACCAATTCACAAGTGATGGTTACTGCAGGTGCCAATCAGGCGTTTGTGAACCTTGTTATTACATTATGTGATGCTGGTGATTCGGTTGTCATGTTTGAGCCATACTACTTCAACTCCTACATGGCCTTTCAGATGACAGGAGTCACCAACATAATTGTTGGTCCTGGCCAGTCAGACACTCTCTATCCTGACGCTGACTGGTTAGAGAGGACACTGTCTGAGTCTAAACCGACTCCGAAAGTTGTAACTGTTGTGAATCCTGGTAACCCAAGTGGCACCTATGTCCCTGAACCGCTGCTTAAGAGGATTGCTCAAATATGCAAAGATGCAGGGTGCTGGCTGATTGTAGATAACACATACGAGTATTTCATGTATGACGGTTTAAAACATTGTTGCGTTGAGGGAGACCACATTGTTAATGTCTTCTCTTTCTCTAAAACCTATGGCATGATGGGTTGGAGGCTTGGATATATAGCTTACTCAGAGAGATTAGATGGGTTTGCAACAGAGCTTGTGAAAATTCAGGACAACATCCCAATCTGTGCTGCCATAATCTCGCAGCGACTGGCTGTATACGCATTAGAGGAAGGTTCTGGGTGGATAACGGAACGGGTAAAGAGTCTAGTGAAGAACAGGGATATTGTGAAAGAGGCGCTTGAGCCGCTGGGGAAGGAGAACGTTAAGGGAGGAGAAGGAGCGATATACCTGTGGGCAAAACTGCCAGAGGGACACAGAGATGATTTCAAGGTGGTGCGGTGGCTGGCTCACCGCCATGGTGTGGTGGTGATCCCGGGGTGTGCAAGTGGTAGCCCCGGGTATCTCCGGGTTTCCTTTGGAGGGTTGCAGGAGGTTGAAATGAGAGCTGCAGCGGCGAGGCTGAGGAAAGGAATAGAGGAGCTGCTTCACCATGGAATGGTGGAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

394

Amino Acids

43.76

Weight (kDa)

5.97

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 32 - 380 3.1e-51 Aminotransferase class I and II
Cys_Met_Meta_PP PF01053 91 - 207 4e-06 Cys/Met metabolism PLP-dependent enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 278
Acc36I ACCTGC 1 cut(s) 278
AccB1I GGYRCC 2 cut(s) 290, 536
AccB7I CCANNNNNTGG 3 cut(s) 115, 1039, 1174
AccI GTMKAC 1 cut(s) 834
AciI CCGC 6 cut(s) 80, 554, 923, 1015, 1030, 1130
AclI AACGTT 2 cut(s) 32, 939
AclWI GGATC 3 cut(s) 167, 180, 1042
AcoI YGGCCR 1 cut(s) 427
AcsI RAATTY 1 cut(s) 780
AfiI CCNNNNNNNGG 5 cut(s) 115, 203, 1039, 1098, 1174
AflII CTTAAG 1 cut(s) 560
AgsI TTSAA 3 cut(s) 373, 1006, 1115
AjnI CCWGG 3 cut(s) 108, 424, 520
AluBI AGCT 7 cut(s) 163, 241, 259, 737, 772, 1124, 1159
AluI AGCT 7 cut(s) 163, 241, 259, 737, 772, 1124, 1159
Alw26I GTCTC 3 cut(s) 105, 214, 660
AlwI GGATC 3 cut(s) 167, 180, 1042
AlwNI CAGNNNCTG 1 cut(s) 826
Ama87I CYCGRG 3 cut(s) 212, 1051, 1073
AoxI GGCC 4 cut(s) 141, 193, 384, 427
ApeKI GCWGC 8 cut(s) 127, 241, 556, 806, 820, 1124, 1127, 1159
ApoI RAATTY 1 cut(s) 780
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
Asp700I GAANNNNTTC 1 cut(s) 207
AspLEI GCGC 1 cut(s) 916
AspS9I GGNCC 2 cut(s) 194, 422
AsuC2I CCSGG 5 cut(s) 1052, 1053, 1074, 1075, 1085
AsuHPI GGTGA 5 cut(s) 350, 397, 1019, 1057, 1157
AvaI CYCGRG 3 cut(s) 212, 1051, 1073
AvaII GGWCC 1 cut(s) 422
BaeGI GKGCMC 1 cut(s) 41
BalI TGGCCA 1 cut(s) 429
BamHI GGATCC 1 cut(s) 172
BanI GGYRCC 2 cut(s) 290, 536
BbsI GAAGAC 2 cut(s) 200, 676
BbvCI CCTCAGC 1 cut(s) 1139
BbvI GCAGC 8 cut(s) 139, 228, 543, 793, 832, 1111, 1139, 1146
BccI CCATC 4 cut(s) 70, 271, 706, 749
BciT130I CCWGG 3 cut(s) 110, 426, 522
BcnI CCSGG 5 cut(s) 1052, 1053, 1074, 1075, 1085
BcoDI GTCTC 3 cut(s) 105, 214, 660
BfaI CTAG 1 cut(s) 884
BfmI CTRYAG 2 cut(s) 285, 1125
BfoI RGCGCY 1 cut(s) 917
BfrI CTTAAG 1 cut(s) 560
BfuAI ACCTGC 1 cut(s) 278
BglI GCCNNNNNGGC 1 cut(s) 299
Bme1390I CCNGG 8 cut(s) 110, 426, 522, 1052, 1053, 1074, 1075, 1085
Bme18I GGWCC 1 cut(s) 422
BmeT110I CYCGRG 3 cut(s) 212, 1051, 1073
BmgT120I GGNCC 2 cut(s) 194, 422
BmiI GGNNCC 4 cut(s) 174, 196, 292, 538
BmrFI CCNGG 8 cut(s) 110, 426, 522, 1052, 1053, 1074, 1075, 1085
BmsI GCATC 3 cut(s) 6, 322, 577
BoxI GACNNNNGTC 1 cut(s) 401
BpiI GAAGAC 2 cut(s) 200, 676
BplI GAGNNNNNCTC 4 cut(s) 211, 243, 556, 588
Bpu10I CCTNAGC 1 cut(s) 1139
BpuEI CTTGAG 1 cut(s) 938
BpuMI CCSGG 5 cut(s) 1052, 1053, 1074, 1075, 1085
BsaI GGTCTC 1 cut(s) 660
BsaJI CCNNGG 8 cut(s) 108, 109, 1033, 1051, 1052, 1072, 1073, 1168
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 5 cut(s) 115, 203, 1039, 1098, 1174
Bse1I ACTGG 3 cut(s) 430, 464, 831
BseBI CCWGG 3 cut(s) 110, 426, 522
BseDI CCNNGG 8 cut(s) 108, 109, 1033, 1051, 1052, 1072, 1073, 1168
BseGI GGATG 2 cut(s) 21, 792
BseLI CCNNNNNNNGG 5 cut(s) 115, 203, 1039, 1098, 1174
BseMII CTCAG 4 cut(s) 74, 471, 756, 1130
BseNI ACTGG 3 cut(s) 430, 464, 831
BseRI GAGGAG 4 cut(s) 40, 123, 963, 1169
BseSI GKGCMC 1 cut(s) 41
BseXI GCAGC 8 cut(s) 139, 228, 543, 793, 832, 1111, 1139, 1146
BseYI CCCAGC 1 cut(s) 925
BshFI GGCC 4 cut(s) 143, 195, 386, 429
BshNI GGYRCC 2 cut(s) 290, 536
BsiHKCI CYCGRG 3 cut(s) 212, 1051, 1073
BsiSI CCGG 3 cut(s) 1052, 1074, 1084
BslFI GGGAC 2 cut(s) 530, 1002
BslI CCNNNNNNNGG 5 cut(s) 115, 203, 1039, 1098, 1174
BsmAI GTCTC 3 cut(s) 105, 214, 660
BsmFI GGGAC 2 cut(s) 530, 1002
BsnI GGCC 4 cut(s) 143, 195, 386, 429
Bso31I GGTCTC 1 cut(s) 660
BsoBI CYCGRG 3 cut(s) 212, 1051, 1073
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 2 cut(s) 172, 1047
Bsp19I CCATGG 2 cut(s) 1033, 1168
BspACI CCGC 6 cut(s) 80, 554, 923, 1015, 1030, 1130
BspANI GGCC 4 cut(s) 143, 195, 386, 429
BspCNI CTCAG 4 cut(s) 73, 472, 755, 1131
BspLI GGNNCC 4 cut(s) 174, 196, 292, 538
BspMAI CTGCAG 2 cut(s) 289, 1129
BspMI ACCTGC 1 cut(s) 278
BspPI GGATC 3 cut(s) 167, 180, 1042
BspQI GCTCTTC 1 cut(s) 234
BspT107I GGYRCC 2 cut(s) 290, 536
BspTI CTTAAG 1 cut(s) 560
BspTNI GGTCTC 1 cut(s) 660
BsrI ACTGG 3 cut(s) 430, 464, 831
BssECI CCNNGG 8 cut(s) 108, 109, 1033, 1051, 1052, 1072, 1073, 1168
BssMI GATC 2 cut(s) 172, 1047
BssNAI GTATAC 1 cut(s) 835
BssT1I CCWWGG 2 cut(s) 1033, 1168
Bst1107I GTATAC 1 cut(s) 835
Bst2UI CCWGG 3 cut(s) 110, 426, 522
Bst4CI ACNGT 3 cut(s) 477, 511, 641
Bst6I CTCTTC 1 cut(s) 234
BstAFI CTTAAG 1 cut(s) 560
BstC8I GCNNGC 2 cut(s) 599, 1023
BstDEI CTNAG 5 cut(s) 60, 145, 480, 742, 1139
BstDSI CCRYGG 2 cut(s) 1033, 1168
BstEII GGTNACC 1 cut(s) 524
BstF5I GGATG 2 cut(s) 21, 792
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 1 cut(s) 916
BstKTI GATC 2 cut(s) 175, 1050
BstMAI GTCTC 3 cut(s) 105, 214, 660
BstMBI GATC 2 cut(s) 172, 1047
BstMWI GCNNNNNNNGC 5 cut(s) 127, 299, 836, 922, 1130
BstNI CCWGG 3 cut(s) 110, 426, 522
BstPAI GACNNNNGTC 1 cut(s) 401
BstPI GGTNACC 1 cut(s) 524
BstSCI CCNGG 8 cut(s) 108, 424, 520, 1050, 1051, 1072, 1073, 1083
BstSFI CTRYAG 2 cut(s) 285, 1125
BstSLI GKGCMC 1 cut(s) 41
BstV1I GCAGC 8 cut(s) 139, 228, 543, 793, 832, 1111, 1139, 1146
BstV2I GAAGAC 2 cut(s) 200, 676
BstX2I RGATCY 1 cut(s) 172
BstYI RGATCY 1 cut(s) 172
BstZ17I GTATAC 1 cut(s) 835
BsuRI GGCC 4 cut(s) 143, 195, 386, 429
BtgI CCRYGG 2 cut(s) 1033, 1168
BtsCI GGATG 2 cut(s) 21, 792
BtsIMutI CAGTG 2 cut(s) 39, 473
BveI ACCTGC 1 cut(s) 278
Cac8I GCNNGC 2 cut(s) 599, 1023
CaiI CAGNNNCTG 1 cut(s) 826
CfoI GCGC 1 cut(s) 916
Cfr13I GGNCC 2 cut(s) 194, 422
Cfr9I CCCGGG 2 cut(s) 1051, 1073
CseI GACGC 1 cut(s) 461
CviAII CATG 8 cut(s) 55, 97, 352, 382, 631, 709, 1034, 1169
DdeI CTNAG 5 cut(s) 60, 145, 480, 742, 1139
DpnI GATC 2 cut(s) 174, 1049
DpnII GATC 2 cut(s) 172, 1047
DraI TTTAAA 1 cut(s) 645
EaeI YGGCCR 1 cut(s) 427
Eam1104I CTCTTC 1 cut(s) 234
EarI CTCTTC 1 cut(s) 234
EciI GGCGGA 1 cut(s) 95
Eco130I CCWWGG 2 cut(s) 1033, 1168
Eco147I AGGCCT 1 cut(s) 143
Eco31I GGTCTC 1 cut(s) 660
Eco47I GGWCC 1 cut(s) 422
Eco88I CYCGRG 3 cut(s) 212, 1051, 1073
Eco91I GGTNACC 1 cut(s) 524
EcoO65I GGTNACC 1 cut(s) 524
EcoRII CCWGG 3 cut(s) 108, 424, 520
EcoT14I CCWWGG 2 cut(s) 1033, 1168
ErhI CCWWGG 2 cut(s) 1033, 1168
FaeI CATG 8 cut(s) 58, 100, 355, 385, 634, 712, 1037, 1172
FalI AAGNNNNNCTT 2 cut(s) 900, 932
FaqI GGGAC 2 cut(s) 530, 1002
FatI CATG 8 cut(s) 54, 96, 351, 381, 630, 708, 1033, 1168
FblI GTMKAC 1 cut(s) 834
FokI GGATG 2 cut(s) 28, 779
FspBI CTAG 1 cut(s) 884
GlaI GCGC 1 cut(s) 915
GsaI CCCAGC 1 cut(s) 929
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 4 cut(s) 143, 195, 386, 429
HapII CCGG 3 cut(s) 1052, 1074, 1084
HgaI GACGC 1 cut(s) 461
HhaI GCGC 1 cut(s) 916
Hin1II CATG 8 cut(s) 58, 100, 355, 385, 634, 712, 1037, 1172
Hin6I GCGC 1 cut(s) 914
HinP1I GCGC 1 cut(s) 914
HinfI GANTC 7 cut(s) 64, 341, 402, 482, 493, 517, 880
HpaII CCGG 3 cut(s) 1052, 1074, 1084
HphI GGTGA 5 cut(s) 350, 397, 1019, 1057, 1157
Hpy166II GTNNAC 2 cut(s) 310, 835
Hpy188I TCNGA 7 cut(s) 63, 69, 393, 436, 481, 498, 745
Hpy188III TCNNGA 3 cut(s) 212, 449, 785
Hpy8I GTNNAC 2 cut(s) 310, 835
HpyAV CCTTC 5 cut(s) 145, 197, 842, 925, 947
HpyCH4III ACNGT 3 cut(s) 477, 511, 641
HpyCH4IV ACGT 2 cut(s) 32, 939
HpyCH4V TGCA 8 cut(s) 121, 287, 582, 590, 764, 1061, 1105, 1127
HpyF10VI GCNNNNNNNGC 5 cut(s) 127, 299, 836, 922, 1130
HpyF3I CTNAG 5 cut(s) 60, 145, 480, 742, 1139
HpySE526I ACGT 2 cut(s) 32, 939
Hsp92II CATG 8 cut(s) 58, 100, 355, 385, 634, 712, 1037, 1172
HspAI GCGC 1 cut(s) 914
Kzo9I GATC 2 cut(s) 172, 1047
LguI GCTCTTC 1 cut(s) 234
LmnI GCTCC 3 cut(s) 160, 956, 1156
Lsp1109I GCAGC 8 cut(s) 139, 228, 543, 793, 832, 1111, 1139, 1146
LweI GCATC 3 cut(s) 6, 322, 577
MaeI CTAG 1 cut(s) 884
MaeII ACGT 2 cut(s) 32, 939
MaeIII GTNAC 4 cut(s) 280, 403, 505, 524
MalI GATC 2 cut(s) 174, 1049
MboI GATC 2 cut(s) 172, 1047
MboII GAAGA 5 cut(s) 200, 221, 260, 676, 901
MflI RGATCY 1 cut(s) 172
MhlI GDGCHC 1 cut(s) 41
MlsI TGGCCA 1 cut(s) 429
MluCI AATT 4 cut(s) 83, 265, 414, 780
MluNI TGGCCA 1 cut(s) 429
MlyI GAGTC 4 cut(s) 411, 487, 491, 889
MmeI TCCRAC 1 cut(s) 698
Mox20I TGGCCA 1 cut(s) 429
MroXI GAANNNNTTC 1 cut(s) 207
MscI TGGCCA 1 cut(s) 429
MseI TTAA 4 cut(s) 561, 644, 678, 942
MslI CAYNNNNRTG 3 cut(s) 44, 996, 1032
Msp20I TGGCCA 1 cut(s) 429
MspA1I CMGCKG 3 cut(s) 556, 925, 1130
MspCI CTTAAG 1 cut(s) 560
MspI CCGG 3 cut(s) 1052, 1074, 1084
MspR9I CCNGG 8 cut(s) 110, 426, 522, 1052, 1053, 1074, 1075, 1085
MvaI CCWGG 3 cut(s) 110, 426, 522
MwoI GCNNNNNNNGC 5 cut(s) 127, 299, 836, 922, 1130
NciI CCSGG 5 cut(s) 1052, 1053, 1074, 1075, 1085
NcoI CCATGG 2 cut(s) 1033, 1168
NdeII GATC 2 cut(s) 172, 1047
NlaIII CATG 8 cut(s) 58, 100, 355, 385, 634, 712, 1037, 1172
NlaIV GGNNCC 4 cut(s) 174, 196, 292, 538
NmuCI GTSAC 1 cut(s) 403
PaqCI CACCTGC 1 cut(s) 278
PasI CCCWGGG 1 cut(s) 109
PceI AGGCCT 1 cut(s) 143
PciSI GCTCTTC 1 cut(s) 234
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PdmI GAANNNNTTC 1 cut(s) 207
PfeI GAWTC 3 cut(s) 64, 341, 517
PflFI GACNNNGTC 1 cut(s) 475
PflMI CCANNNNNTGG 3 cut(s) 115, 1039, 1174
PleI GAGTC 4 cut(s) 410, 487, 490, 888
PpsI GAGTC 4 cut(s) 410, 487, 490, 888
PshAI GACNNNNGTC 1 cut(s) 401
Psp1406I AACGTT 2 cut(s) 32, 939
Psp6I CCWGG 3 cut(s) 108, 424, 520
PspEI GGTNACC 1 cut(s) 524
PspFI CCCAGC 1 cut(s) 925
PspGI CCWGG 3 cut(s) 108, 424, 520
PspN4I GGNNCC 4 cut(s) 174, 196, 292, 538
PspPI GGNCC 2 cut(s) 194, 422
PstI CTGCAG 2 cut(s) 289, 1129
PstNI CAGNNNCTG 1 cut(s) 826
PsuI RGATCY 1 cut(s) 172
PsyI GACNNNGTC 1 cut(s) 475
RseI CAYNNNNRTG 3 cut(s) 44, 996, 1032
SapI GCTCTTC 1 cut(s) 234
SaqAI TTAA 4 cut(s) 561, 644, 678, 942
Sau3AI GATC 2 cut(s) 172, 1047
Sau96I GGNCC 2 cut(s) 194, 422
SchI GAGTC 4 cut(s) 411, 487, 491, 889
ScrFI CCNGG 8 cut(s) 110, 426, 522, 1052, 1053, 1074, 1075, 1085
SduI GDGCHC 1 cut(s) 41
SfaNI GCATC 3 cut(s) 6, 322, 577
SfcI CTRYAG 2 cut(s) 285, 1125
SinI GGWCC 1 cut(s) 422
SmaI CCCGGG 2 cut(s) 1053, 1075
SmiMI CAYNNNNRTG 3 cut(s) 44, 996, 1032
SmlI CTYRAG 2 cut(s) 560, 917
SmoI CTYRAG 2 cut(s) 560, 917
Sse9I AATT 4 cut(s) 83, 265, 414, 780
SseBI AGGCCT 1 cut(s) 143
SsiI CCGC 6 cut(s) 80, 554, 923, 1015, 1030, 1130
SspMI CTAG 1 cut(s) 884
StuI AGGCCT 1 cut(s) 143
StyD4I CCNGG 8 cut(s) 108, 424, 520, 1050, 1051, 1072, 1073, 1083
StyI CCWWGG 2 cut(s) 1033, 1168
TaaI ACNGT 3 cut(s) 477, 511, 641
TaiI ACGT 2 cut(s) 35, 942
TaqI TCGA 1 cut(s) 23
TasI AATT 4 cut(s) 83, 265, 414, 780
TauI GCSGC 2 cut(s) 925, 1133
TfiI GAWTC 3 cut(s) 64, 341, 517
Tru1I TTAA 4 cut(s) 561, 644, 678, 942
Tru9I TTAA 4 cut(s) 561, 644, 678, 942
TscAI CASTG 2 cut(s) 46, 480
TseFI GTSAC 1 cut(s) 403
TseI GCWGC 8 cut(s) 127, 241, 556, 806, 820, 1124, 1127, 1159
Tsp45I GTSAC 1 cut(s) 403
TspDTI ATGAA 2 cut(s) 216, 619
TspGWI ACGGA 1 cut(s) 881
TspMI CCCGGG 2 cut(s) 1051, 1073
TspRI CASTG 2 cut(s) 46, 480
Tth111I GACNNNGTC 1 cut(s) 475
Van91I CCANNNNNTGG 3 cut(s) 115, 1039, 1174
Vha464I CTTAAG 1 cut(s) 560
VpaK11BI GGWCC 1 cut(s) 422
XapI RAATTY 1 cut(s) 780
XmaI CCCGGG 2 cut(s) 1051, 1073
XmiI GTMKAC 1 cut(s) 834
XmnI GAANNNNTTC 1 cut(s) 207
XspI CTAG 1 cut(s) 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.