pycom17g20340

Bifunctional aspartate aminotransferase and glutamate aspartate-prephenate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0007427
Physical Location & Seq
Forward (+)
18558819 .. 18563418
4600 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g20340.4

Sequence Viewer

Length: 1185 bp
ATGGGTTCCTATGAACTACTTGCAAGGAGGGCCGTGGAGACTGATATGCCGATCATGGTTAAGATACAGCAGTTGGTCCGAGGAGCCAAAAATGCTGTGTCATTGGCTCAGGGAGTAGTTCACTGGCAACCACCCAAAGAGGCATTGGATAAGGTGAAAGAACTTGTTTGGGAGCCTTCAATTAGTCGTTATGGTGCTGATGAAGGTTTACCTGAACTCAGGGAGGCATTAGTACAAAAGTTGCGTCGTGAAAATAAGTTGTGCAAATCTTCAGTGATGGTTACTGCAGGCGCGAATCAGGCATTTGTGAACCTTGCTCTTACATTGTGTGATGCCGGGGACTCTGTGGTTATGTTTGCACCATACTACTTCAATGCCTACATGTCCTTCCAAATGACGGGAGTCACTAATATACTCGTGGGTCCTGGTCACCCAAAGACACTTTACCCAGATGCAGACTGGTTGGAGAAAACATTATCGGAAACCAAACCAACCCCAAAACTTGTTACGGTTGTTAATCCTGGTAACCCAAGTGGAACCTATATTCCGGACTCTCTTCTTAAGAGGATTTCCGATATATGCAGAGGTGCTGGATCATGGCTAGTTGTGGATAATACATATGAGTATTTTATGTATGGTGATTTGAAACACACATGTGTGGAGGGAAATCACATAGTCAACATTTTTTCCTTCTCGAAAGCTTATGGAATGATGGGATGGCGTGTCGGATATATAGCATACCCATCAGAAGTAGAGGGCTTTGGTACCCAACTCCTCAAAGTTCAGGACAACATTCCTATCTGTGCTTCAATAATTTCACAGCACCTTGCCCTCTACTCATTGGAAATGGGACCCGAATGGGTCATTGAACGAGTGAAAAGTCTAGTGAAGAACAGAGACATCGTTATAGAAGCGCTCTCTCCCCTTGGGGACAATGCCATTAAAGGCGGAGAGGGAGCTATATACTTGTGGGCAAAGCTTCCGGACAAATATGCAGATGACGATAAATTTGTTCACTGGCTTGCTCACAGGCATGGGGTGGTGGTGATCCCTGGAAGTGCATGTGGGTGCCCGGGGAATGTGAGAATCTCCTTTGCTGGCTTGGTAGAGGATGACTGCAAAGCTGCTGCAGAAAGGCTGAGGAGAGGGTTAGAAGAGTTGATCAGAGATGGATTGGTTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000096 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006521 GO:0006555 GO:0006558 GO:0006568 GO:0006569 GO:0006570 GO:0006576 GO:0006586 GO:0006725 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009056 GO:0009058 GO:0009063 GO:0009066 GO:0009072 GO:0009074 GO:0009308 GO:0009310 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009698 GO:0009850 GO:0009851 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010252 GO:0010326 GO:0010364 GO:0010366 GO:0010565 GO:0010600 GO:0010817 GO:0016054 GO:0016740 GO:0016769 GO:0017144 GO:0019222 GO:0019439 GO:0019748 GO:0019752 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0032350 GO:0032351 GO:0032353 GO:0033238 GO:0033239 GO:0034641 GO:0042402 GO:0042430 GO:0042436 GO:0042445 GO:0042446 GO:0042592 GO:0042762 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0045763 GO:0046218 GO:0046395 GO:0046483 GO:0046700 GO:0046885 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090354 GO:0090356 GO:0090357 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901996 GO:1901997 GO:1902221
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aminotran_1_2

Protein Analysis

395

Amino Acids

43.54

Weight (kDa)

5.97

Isoelectric Point (pI)

31.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 764
AccB1I GGYRCC 2 cut(s) 764, 1068
AccII CGCG 1 cut(s) 293
AccIII TCCGGA 2 cut(s) 547, 982
AciI CCGC 1 cut(s) 948
AclWI GGATC 2 cut(s) 601, 1042
AcsI RAATTY 1 cut(s) 1007
AcuI CTGAAG 1 cut(s) 255
AfaI GTAC 2 cut(s) 234, 766
AfeI AGCGCT 1 cut(s) 915
AfiI CCNNNNNNNGG 1 cut(s) 397
AflII CTTAAG 1 cut(s) 560
AflIII ACRYGT 2 cut(s) 381, 653
AgsI TTSAA 5 cut(s) 180, 373, 646, 810, 869
AjnI CCWGG 3 cut(s) 424, 520, 1051
AleI CACNNNNGTG 2 cut(s) 654, 656
AloI GAACNNNNNNTCC 2 cut(s) 529, 561
AluBI AGCT 4 cut(s) 701, 959, 979, 1124
AluI AGCT 4 cut(s) 701, 959, 979, 1124
Alw26I GTCTC 2 cut(s) 32, 891
AlwI GGATC 2 cut(s) 601, 1042
Ama87I CYCGRG 1 cut(s) 1072
Aor13HI TCCGGA 2 cut(s) 547, 982
Aor51HI AGCGCT 1 cut(s) 915
AoxI GGCC 1 cut(s) 30
ApeKI GCWGC 2 cut(s) 1124, 1127
ApoI RAATTY 1 cut(s) 1007
ArsI GACNNNNNNTTYG 4 cut(s) 229, 261, 992, 1024
Asp718I GGTACC 1 cut(s) 764
AspLEI GCGC 2 cut(s) 293, 916
AspS9I GGNCC 4 cut(s) 30, 76, 422, 851
AsuC2I CCSGG 3 cut(s) 337, 1073, 1074
AsuHPI GGTGA 4 cut(s) 166, 422, 650, 1057
AvaI CYCGRG 1 cut(s) 1072
AvaII GGWCC 3 cut(s) 76, 422, 851
BaeGI GKGCMC 1 cut(s) 1073
BaeI ACNNNNGTAYC 2 cut(s) 56, 89
BanI GGYRCC 2 cut(s) 764, 1068
BauI CACGAG 1 cut(s) 416
BbvCI CCTCAGC 1 cut(s) 1139
BbvI GCAGC 2 cut(s) 1111, 1114
BccI CCATC 5 cut(s) 271, 706, 711, 751, 1163
BceAI ACGGC 1 cut(s) 17
BciT130I CCWGG 3 cut(s) 426, 522, 1053
BclI TGATCA 1 cut(s) 1161
BcnI CCSGG 3 cut(s) 337, 1073, 1074
BcoDI GTCTC 2 cut(s) 32, 891
BfaI CTAG 2 cut(s) 602, 884
BfmI CTRYAG 2 cut(s) 285, 1128
BfoI RGCGCY 1 cut(s) 917
BfrI CTTAAG 1 cut(s) 560
BisI GCNGC 2 cut(s) 1125, 1128
BlsI GCNGC 2 cut(s) 1126, 1129
Bme1390I CCNGG 6 cut(s) 337, 426, 522, 1053, 1073, 1074
Bme18I GGWCC 3 cut(s) 76, 422, 851
BmeT110I CYCGRG 1 cut(s) 1072
BmgT120I GGNCC 4 cut(s) 30, 76, 422, 851
BmiI GGNNCC 9 cut(s) 7, 85, 174, 423, 538, 766, 852, 853, 1070
BmrFI CCNGG 6 cut(s) 337, 426, 522, 1053, 1073, 1074
BmsI GCATC 2 cut(s) 322, 442
BoxI GACNNNNGTC 1 cut(s) 401
Bpu10I CCTNAGC 2 cut(s) 108, 1139
BpuMI CCSGG 3 cut(s) 337, 1073, 1074
BsaJI CCNNGG 7 cut(s) 33, 79, 336, 925, 1051, 1072, 1073
BsaWI WCCGGW 2 cut(s) 547, 982
Bsc4I CCNNNNNNNGG 1 cut(s) 397
Bse1I ACTGG 3 cut(s) 128, 464, 1022
BseAI TCCGGA 2 cut(s) 547, 982
BseBI CCWGG 3 cut(s) 426, 522, 1053
BseDI CCNNGG 7 cut(s) 33, 79, 336, 925, 1051, 1072, 1073
BseGI GGATG 2 cut(s) 722, 1117
BseLI CCNNNNNNNGG 1 cut(s) 397
BseMII CTCAG 3 cut(s) 122, 232, 1130
BseNI ACTGG 3 cut(s) 128, 464, 1022
BseRI GAGGAG 3 cut(s) 96, 764, 1156
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 2 cut(s) 1111, 1114
Bsh1236I CGCG 1 cut(s) 293
BshFI GGCC 1 cut(s) 32
BshNI GGYRCC 2 cut(s) 764, 1068
BsiHKCI CYCGRG 1 cut(s) 1072
BsiSI CCGG 4 cut(s) 336, 548, 983, 1073
BslFI GGGAC 3 cut(s) 353, 864, 944
BslI CCNNNNNNNGG 1 cut(s) 397
BsmAI GTCTC 2 cut(s) 32, 891
BsmFI GGGAC 3 cut(s) 353, 864, 944
BsnI GGCC 1 cut(s) 32
BsoBI CYCGRG 1 cut(s) 1072
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp13I TCCGGA 2 cut(s) 547, 982
Bsp143I GATC 4 cut(s) 51, 593, 1047, 1161
BspACI CCGC 1 cut(s) 948
BspANI GGCC 1 cut(s) 32
BspCNI CTCAG 3 cut(s) 121, 231, 1131
BspEI TCCGGA 2 cut(s) 547, 982
BspFNI CGCG 1 cut(s) 293
BspLI GGNNCC 9 cut(s) 7, 85, 174, 423, 538, 766, 852, 853, 1070
BspMAI CTGCAG 2 cut(s) 289, 1132
BspPI GGATC 2 cut(s) 601, 1042
BspT107I GGYRCC 2 cut(s) 764, 1068
BspTI CTTAAG 1 cut(s) 560
BsrI ACTGG 3 cut(s) 128, 464, 1022
BssECI CCNNGG 7 cut(s) 33, 79, 336, 925, 1051, 1072, 1073
BssMI GATC 4 cut(s) 51, 593, 1047, 1161
BssSI CACGAG 1 cut(s) 416
BssT1I CCWWGG 1 cut(s) 925
Bst2BI CACGAG 1 cut(s) 416
Bst2UI CCWGG 3 cut(s) 426, 522, 1053
Bst4CI ACNGT 1 cut(s) 511
Bst6I CTCTTC 2 cut(s) 561, 1149
BstAFI CTTAAG 1 cut(s) 560
BstC8I GCNNGC 3 cut(s) 289, 1023, 1099
BstDEI CTNAG 3 cut(s) 108, 218, 1139
BstDSI CCRYGG 1 cut(s) 33
BstEII GGTNACC 2 cut(s) 428, 524
BstF5I GGATG 2 cut(s) 722, 1117
BstFNI CGCG 1 cut(s) 293
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 2 cut(s) 293, 916
BstKTI GATC 4 cut(s) 54, 596, 1050, 1164
BstMAI GTCTC 2 cut(s) 32, 891
BstMBI GATC 4 cut(s) 51, 593, 1047, 1161
BstMWI GCNNNNNNNGC 3 cut(s) 29, 92, 299
BstNI CCWGG 3 cut(s) 426, 522, 1053
BstNSI RCATGY 3 cut(s) 385, 657, 1065
BstPAI GACNNNNGTC 1 cut(s) 401
BstPI GGTNACC 2 cut(s) 428, 524
BstSCI CCNGG 6 cut(s) 335, 424, 520, 1051, 1071, 1072
BstSFI CTRYAG 2 cut(s) 285, 1128
BstSLI GKGCMC 1 cut(s) 1073
BstUI CGCG 1 cut(s) 293
BstV1I GCAGC 2 cut(s) 1111, 1114
BsuRI GGCC 1 cut(s) 32
BtgI CCRYGG 1 cut(s) 33
BtsCI GGATG 2 cut(s) 722, 1117
BtsIMutI CAGTG 3 cut(s) 121, 279, 1015
Cac8I GCNNGC 3 cut(s) 289, 1023, 1099
CfoI GCGC 2 cut(s) 293, 916
Cfr13I GGNCC 4 cut(s) 30, 76, 422, 851
Cfr9I CCCGGG 1 cut(s) 1072
CseI GACGC 1 cut(s) 233
Csp6I GTAC 2 cut(s) 233, 765
CviAII CATG 6 cut(s) 55, 382, 597, 654, 1034, 1062
CviQI GTAC 2 cut(s) 233, 765
DdeI CTNAG 3 cut(s) 108, 218, 1139
DpnI GATC 4 cut(s) 53, 595, 1049, 1163
DpnII GATC 4 cut(s) 51, 593, 1047, 1161
Eam1104I CTCTTC 2 cut(s) 561, 1149
EarI CTCTTC 2 cut(s) 561, 1149
EciI GGCGGA 1 cut(s) 963
Eco130I CCWWGG 1 cut(s) 925
Eco47I GGWCC 3 cut(s) 76, 422, 851
Eco47III AGCGCT 1 cut(s) 915
Eco57I CTGAAG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 1072
Eco91I GGTNACC 2 cut(s) 428, 524
EcoO109I RGGNCCY 2 cut(s) 422, 851
EcoO65I GGTNACC 2 cut(s) 428, 524
EcoRII CCWGG 3 cut(s) 424, 520, 1051
EcoT14I CCWWGG 1 cut(s) 925
ErhI CCWWGG 1 cut(s) 925
FaeI CATG 6 cut(s) 58, 385, 600, 657, 1037, 1065
FaqI GGGAC 3 cut(s) 353, 864, 944
FatI CATG 6 cut(s) 54, 381, 596, 653, 1033, 1061
FauNDI CATATG 1 cut(s) 619
FbaI TGATCA 1 cut(s) 1161
Fnu4HI GCNGC 2 cut(s) 1125, 1128
FokI GGATG 2 cut(s) 729, 1124
Fsp4HI GCNGC 2 cut(s) 1125, 1128
FspBI CTAG 2 cut(s) 602, 884
GlaI GCGC 2 cut(s) 292, 915
GluI GCNGC 2 cut(s) 1125, 1128
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 1 cut(s) 32
HapII CCGG 4 cut(s) 336, 548, 983, 1073
HgaI GACGC 1 cut(s) 233
HhaI GCGC 2 cut(s) 293, 916
Hin1II CATG 6 cut(s) 58, 385, 600, 657, 1037, 1065
Hin6I GCGC 2 cut(s) 291, 914
HinP1I GCGC 2 cut(s) 291, 914
HincII GTYRAC 1 cut(s) 679
HindII GTYRAC 1 cut(s) 679
HindIII AAGCTT 2 cut(s) 699, 977
HinfI GANTC 5 cut(s) 295, 341, 402, 551, 1086
HpaII CCGG 4 cut(s) 336, 548, 983, 1073
HphI GGTGA 4 cut(s) 166, 422, 650, 1057
Hpy166II GTNNAC 5 cut(s) 121, 209, 310, 679, 1015
Hpy188I TCNGA 6 cut(s) 80, 481, 574, 728, 748, 1166
Hpy188III TCNNGA 5 cut(s) 248, 548, 694, 785, 983
Hpy8I GTNNAC 5 cut(s) 121, 209, 310, 679, 1015
Hpy99I CGWCG 1 cut(s) 249
HpyAV CCTTC 4 cut(s) 186, 197, 397, 700
HpyCH4III ACNGT 1 cut(s) 511
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 92, 299
HpyF3I CTNAG 3 cut(s) 108, 218, 1139
Hsp92II CATG 6 cut(s) 58, 385, 600, 657, 1037, 1065
HspAI GCGC 2 cut(s) 291, 914
KflI GGGWCCC 1 cut(s) 851
Kpn2I TCCGGA 2 cut(s) 547, 982
KpnI GGTACC 1 cut(s) 768
Ksp22I TGATCA 1 cut(s) 1161
Kzo9I GATC 4 cut(s) 51, 593, 1047, 1161
LmnI GCTCC 3 cut(s) 83, 172, 956
Lsp1109I GCAGC 2 cut(s) 1111, 1114
LweI GCATC 2 cut(s) 322, 442
MaeI CTAG 2 cut(s) 602, 884
MaeIII GTNAC 5 cut(s) 280, 403, 428, 505, 524
MalI GATC 4 cut(s) 53, 595, 1049, 1163
MboI GATC 4 cut(s) 51, 593, 1047, 1161
MboII GAAGA 4 cut(s) 261, 548, 901, 1166
MhlI GDGCHC 1 cut(s) 1073
MluCI AATT 3 cut(s) 180, 813, 1007
MlyI GAGTC 3 cut(s) 335, 411, 545
MmeI TCCRAC 2 cut(s) 444, 706
MroI TCCGGA 2 cut(s) 547, 982
MseI TTAA 4 cut(s) 60, 516, 561, 942
MslI CAYNNNNRTG 4 cut(s) 654, 656, 1032, 1066
MspCI CTTAAG 1 cut(s) 560
MspI CCGG 4 cut(s) 336, 548, 983, 1073
MspR9I CCNGG 6 cut(s) 337, 426, 522, 1053, 1073, 1074
MvaI CCWGG 3 cut(s) 426, 522, 1053
MvnI CGCG 1 cut(s) 293
MwoI GCNNNNNNNGC 3 cut(s) 29, 92, 299
NciI CCSGG 3 cut(s) 337, 1073, 1074
NdeI CATATG 1 cut(s) 619
NdeII GATC 4 cut(s) 51, 593, 1047, 1161
NlaIII CATG 6 cut(s) 58, 385, 600, 657, 1037, 1065
NlaIV GGNNCC 9 cut(s) 7, 85, 174, 423, 538, 766, 852, 853, 1070
NmuCI GTSAC 2 cut(s) 403, 428
NspI RCATGY 3 cut(s) 385, 657, 1065
OliI CACNNNNGTG 2 cut(s) 654, 656
PciI ACATGT 2 cut(s) 381, 653
PfeI GAWTC 2 cut(s) 295, 1086
PkrI GCNGC 2 cut(s) 1126, 1129
PleI GAGTC 3 cut(s) 335, 410, 545
PpsI GAGTC 3 cut(s) 335, 410, 545
PpuMI RGGWCCY 2 cut(s) 422, 851
PscI ACATGT 2 cut(s) 381, 653
PshAI GACNNNNGTC 1 cut(s) 401
Psp5II RGGWCCY 2 cut(s) 422, 851
Psp6I CCWGG 3 cut(s) 424, 520, 1051
PspEI GGTNACC 2 cut(s) 428, 524
PspGI CCWGG 3 cut(s) 424, 520, 1051
PspN4I GGNNCC 9 cut(s) 7, 85, 174, 423, 538, 766, 852, 853, 1070
PspPI GGNCC 4 cut(s) 30, 76, 422, 851
PspPPI RGGWCCY 2 cut(s) 422, 851
PstI CTGCAG 2 cut(s) 289, 1132
RsaI GTAC 2 cut(s) 234, 766
RsaNI GTAC 2 cut(s) 233, 765
RseI CAYNNNNRTG 4 cut(s) 654, 656, 1032, 1066
SaqAI TTAA 4 cut(s) 60, 516, 561, 942
SatI GCNGC 2 cut(s) 1125, 1128
Sau3AI GATC 4 cut(s) 51, 593, 1047, 1161
Sau96I GGNCC 4 cut(s) 30, 76, 422, 851
SchI GAGTC 3 cut(s) 335, 411, 545
ScrFI CCNGG 6 cut(s) 337, 426, 522, 1053, 1073, 1074
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 2 cut(s) 322, 442
SfcI CTRYAG 2 cut(s) 285, 1128
SinI GGWCC 3 cut(s) 76, 422, 851
SmaI CCCGGG 1 cut(s) 1074
SmiMI CAYNNNNRTG 4 cut(s) 654, 656, 1032, 1066
SmlI CTYRAG 1 cut(s) 560
SmoI CTYRAG 1 cut(s) 560
Sse9I AATT 3 cut(s) 180, 813, 1007
SsiI CCGC 1 cut(s) 948
SspMI CTAG 2 cut(s) 602, 884
StyD4I CCNGG 6 cut(s) 335, 424, 520, 1051, 1071, 1072
StyI CCWWGG 1 cut(s) 925
TaaI ACNGT 1 cut(s) 511
TaqI TCGA 1 cut(s) 695
TasI AATT 3 cut(s) 180, 813, 1007
TatI WGTACW 1 cut(s) 232
TfiI GAWTC 2 cut(s) 295, 1086
Tru1I TTAA 4 cut(s) 60, 516, 561, 942
Tru9I TTAA 4 cut(s) 60, 516, 561, 942
TscAI CASTG 3 cut(s) 128, 279, 1022
TseFI GTSAC 2 cut(s) 403, 428
TseI GCWGC 2 cut(s) 1124, 1127
Tsp45I GTSAC 2 cut(s) 403, 428
TspDTI ATGAA 2 cut(s) 27, 216
TspMI CCCGGG 1 cut(s) 1072
TspRI CASTG 3 cut(s) 128, 279, 1022
Vha464I CTTAAG 1 cut(s) 560
VpaK11BI GGWCC 3 cut(s) 76, 422, 851
XapI RAATTY 1 cut(s) 1007
XceI RCATGY 3 cut(s) 385, 657, 1065
XcmI CCANNNNNNNNNTGG 2 cut(s) 142, 456
XmaI CCCGGG 1 cut(s) 1072
XspI CTAG 2 cut(s) 602, 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.