Rh2BG396600

Bifunctional aspartate aminotransferase and glutamate aspartate-prephenate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0007427
Physical Location & Seq
Reverse (-)
56232660 .. 56254348
21689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG396600.1

Sequence Viewer

Length: 1194 bp
ATGCCTGCCTTCTCTAGAGCATACACGTTTGCTCAGTTGAAGGATGTTTTCGAGACTGAGATGGATCATGCTAATAGCTCTGTCATAGATGTAACAAGTACCACCATATTTGAAGAAGCAGGAGTAGTTCATTGGCAACCACCCAAACAGGCACTGGATAAGGTGAAAGAACTTGTATGGGAGCCTTCAATTAGTCGTTATGGTGCTGATGAAGGTATGCCTGAACTCAGGGAGGCATTGGTAAAAAAGTTGCAAGAGGAAAACAAGTTATGCAAATCTTCGGTTATGGTTACTGCAGGGGCAAATCAGGCATTTGTGAATCTTGTTCTTACATTGTGTGATGCTGGAGACTCTGTTGTCATGTTTGCACCATACTACTTCAATGCCTACATGTCCTTCCAGATGACTGGAGTTACTAATATACTTGTGGGTCCTGGTCAACCAGATACACTTTATCCAGATGCAGACTGGTTGGAGAAAACACTGTCAGAAACAAAACCAACCCCAAAACTTGTCACAGTTGTTAATCCTGGCAACCCATCCGGAACCTACATTCCAGAACCTCTTCTTAAGAGGATTTCAGATATTTGCAGAGAGGCTGGATCATGGCTTGTTGTGGACAATACATATGAGTATTTTATGTATGATGATTTAAAGCATTCTTGTGTGGAGGGTAATCACATTGTCAACATCTTTTCCTTCTCAAAAGCTTATGGGATGATGGGATGGCGAGTTGGCTATATAGCATACCCATCTGAAGTAGAGGGCTTTGGTACTCAACTCCTCAAAGTTCAAGATAACATTCCCATCTGTGCTTCAATACTTTCACAACATCTTGCCCTCTGCTCATTAGAAATGGGACCTGAATGGGTTGTTGAAAGAGTGAAAGGTCTTGTCAAGAACAGGGAAATTGTTTTAGAAGCGCTCTCCCCACTCGGAAAACAGTCTGTTAAAGGTGGAGAAGGTGCTATATACCTGTGGGCCAAGCTTCCAGACAAATATGTCAATGACTCCGAAATTGTTCACTGGCTTGCTCACAGGCATGGGGTGGTGGTGATTCCTGGAAGCGCATGTGGGTGCCCTGGAAATTTGAGAATCTCCTTTGGTGGCCTGTTAGAGGATGACTGCAAAGCTGCTGCAGAGAGGCTGAGAAGAGGGTTAGAAGAATTGGTCAAAGATGGAATGGTCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000096 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006521 GO:0006555 GO:0006558 GO:0006568 GO:0006569 GO:0006570 GO:0006576 GO:0006586 GO:0006725 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009056 GO:0009058 GO:0009063 GO:0009066 GO:0009072 GO:0009074 GO:0009308 GO:0009310 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009698 GO:0009850 GO:0009851 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010252 GO:0010326 GO:0010364 GO:0010366 GO:0010565 GO:0010600 GO:0010817 GO:0016054 GO:0016740 GO:0016769 GO:0017144 GO:0019222 GO:0019439 GO:0019748 GO:0019752 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0032350 GO:0032351 GO:0032353 GO:0033238 GO:0033239 GO:0034641 GO:0042402 GO:0042430 GO:0042436 GO:0042445 GO:0042446 GO:0042592 GO:0042762 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0045763 GO:0046218 GO:0046395 GO:0046483 GO:0046700 GO:0046885 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090354 GO:0090356 GO:0090357 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901996 GO:1901997 GO:1902221
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aminotran_1_2

Protein Analysis

397

Amino Acids

43.94

Weight (kDa)

5.11

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 47 - 383 7.1e-51 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 356, 1001
AccB1I GGYRCC 1 cut(s) 1077
AccIII TCCGGA 1 cut(s) 542
AclWI GGATC 2 cut(s) 72, 610
AcsI RAATTY 1 cut(s) 1087
AcuI CTGAAG 1 cut(s) 777
AfaI GTAC 2 cut(s) 100, 775
AfeI AGCGCT 1 cut(s) 924
AfiI CCNNNNNNNGG 1 cut(s) 1117
AflII CTTAAG 1 cut(s) 569
AflIII ACRYGT 2 cut(s) 24, 390
AgsI TTSAA 7 cut(s) 40, 113, 189, 382, 794, 819, 878
AjnI CCWGG 4 cut(s) 433, 529, 1060, 1081
AloI GAACNNNNNNTCC 2 cut(s) 538, 570
AluBI AGCT 4 cut(s) 78, 710, 988, 1133
AluI AGCT 4 cut(s) 78, 710, 988, 1133
Alw26I GTCTC 2 cut(s) 47, 342
AlwI GGATC 2 cut(s) 72, 610
AlwNI CAGNNNCTG 1 cut(s) 154
Aor13HI TCCGGA 1 cut(s) 542
Aor51HI AGCGCT 1 cut(s) 924
AoxI GGCC 2 cut(s) 981, 1108
ApeKI GCWGC 2 cut(s) 1133, 1136
ApoI RAATTY 1 cut(s) 1087
Asp700I GAANNNNTTC 2 cut(s) 564, 1020
AspLEI GCGC 2 cut(s) 925, 1070
AspS9I GGNCC 3 cut(s) 431, 860, 981
AsuHPI GGTGA 2 cut(s) 175, 1066
AvaII GGWCC 2 cut(s) 431, 860
BaeGI GKGCMC 1 cut(s) 1082
BanI GGYRCC 1 cut(s) 1077
BbvI GCAGC 2 cut(s) 1120, 1123
BccI CCATC 7 cut(s) 55, 547, 715, 720, 760, 815, 1172
BciT130I CCWGG 4 cut(s) 435, 531, 1062, 1083
BcoDI GTCTC 2 cut(s) 47, 342
BfaI CTAG 1 cut(s) 15
BfmI CTRYAG 2 cut(s) 294, 1137
BfoI RGCGCY 1 cut(s) 926
BfrI CTTAAG 1 cut(s) 569
BisI GCNGC 2 cut(s) 1134, 1137
BlsI GCNGC 2 cut(s) 1135, 1138
Bme1390I CCNGG 4 cut(s) 435, 531, 1062, 1083
Bme18I GGWCC 2 cut(s) 431, 860
BmgT120I GGNCC 3 cut(s) 431, 860, 981
BmiI GGNNCC 5 cut(s) 183, 432, 547, 861, 1079
BmrFI CCNGG 4 cut(s) 435, 531, 1062, 1083
BmsI GCATC 2 cut(s) 331, 451
BpmI CTGGAG 2 cut(s) 366, 429
BsaJI CCNNGG 1 cut(s) 1081
BsaWI WCCGGW 1 cut(s) 542
BsaXI ACNNNNNCTCC 2 cut(s) 339, 369
Bsc4I CCNNNNNNNGG 1 cut(s) 1117
Bse1I ACTGG 4 cut(s) 159, 412, 473, 1031
BseAI TCCGGA 1 cut(s) 542
BseBI CCWGG 4 cut(s) 435, 531, 1062, 1083
BseDI CCNNGG 1 cut(s) 1081
BseGI GGATG 5 cut(s) 49, 539, 723, 731, 1126
BseLI CCNNNNNNNGG 1 cut(s) 1117
BseMII CTCAG 4 cut(s) 47, 48, 241, 1139
BseNI ACTGG 4 cut(s) 159, 412, 473, 1031
BseRI GAGGAG 1 cut(s) 773
BseSI GKGCMC 1 cut(s) 1082
BseXI GCAGC 2 cut(s) 1120, 1123
BshFI GGCC 2 cut(s) 983, 1110
BshNI GGYRCC 1 cut(s) 1077
BsiSI CCGG 1 cut(s) 543
BslFI GGGAC 1 cut(s) 873
BslI CCNNNNNNNGG 1 cut(s) 1117
BsmAI GTCTC 2 cut(s) 47, 342
BsmFI GGGAC 1 cut(s) 873
BsmI GAATGC 1 cut(s) 658
BsnI GGCC 2 cut(s) 983, 1110
Bsp1286I GDGCHC 1 cut(s) 1082
Bsp13I TCCGGA 1 cut(s) 542
Bsp143I GATC 2 cut(s) 64, 602
BspANI GGCC 2 cut(s) 983, 1110
BspCNI CTCAG 4 cut(s) 46, 49, 240, 1140
BspEI TCCGGA 1 cut(s) 542
BspLI GGNNCC 5 cut(s) 183, 432, 547, 861, 1079
BspMAI CTGCAG 2 cut(s) 298, 1141
BspPI GGATC 2 cut(s) 72, 610
BspT107I GGYRCC 1 cut(s) 1077
BspTI CTTAAG 1 cut(s) 569
BsrI ACTGG 4 cut(s) 159, 412, 473, 1031
BssECI CCNNGG 1 cut(s) 1081
BssMI GATC 2 cut(s) 64, 602
Bst2UI CCWGG 4 cut(s) 435, 531, 1062, 1083
Bst4CI ACNGT 3 cut(s) 486, 520, 945
Bst6I CTCTTC 2 cut(s) 570, 1147
BstAFI CTTAAG 1 cut(s) 569
BstC8I GCNNGC 2 cut(s) 6, 1032
BstDEI CTNAG 4 cut(s) 33, 57, 227, 1148
BstENI CCTNNNNNAGG 1 cut(s) 1115
BstF5I GGATG 5 cut(s) 49, 539, 723, 731, 1126
BstH2I RGCGCY 1 cut(s) 926
BstHHI GCGC 2 cut(s) 925, 1070
BstKTI GATC 2 cut(s) 67, 605
BstMAI GTCTC 2 cut(s) 47, 342
BstMBI GATC 2 cut(s) 64, 602
BstMWI GCNNNNNNNGC 1 cut(s) 308
BstNI CCWGG 4 cut(s) 435, 531, 1062, 1083
BstNSI RCATGY 2 cut(s) 394, 1074
BstSCI CCNGG 4 cut(s) 433, 529, 1060, 1081
BstSFI CTRYAG 2 cut(s) 294, 1137
BstSLI GKGCMC 1 cut(s) 1082
BstV1I GCAGC 2 cut(s) 1120, 1123
BstXI CCANNNNNNTGG 1 cut(s) 407
BsuRI GGCC 2 cut(s) 983, 1110
BtsCI GGATG 5 cut(s) 49, 539, 723, 731, 1126
BtsIMutI CAGTG 3 cut(s) 152, 482, 1024
Cac8I GCNNGC 2 cut(s) 6, 1032
CaiI CAGNNNCTG 1 cut(s) 154
CfoI GCGC 2 cut(s) 925, 1070
Cfr13I GGNCC 3 cut(s) 431, 860, 981
Csp6I GTAC 2 cut(s) 99, 774
CspCI CAANNNNNGTGG 2 cut(s) 91, 126
CviAII CATG 6 cut(s) 68, 361, 391, 606, 1043, 1071
CviQI GTAC 2 cut(s) 99, 774
DdeI CTNAG 4 cut(s) 33, 57, 227, 1148
DpnI GATC 2 cut(s) 66, 604
DpnII GATC 2 cut(s) 64, 602
DraI TTTAAA 1 cut(s) 654
DrdI GACNNNNNNGTC 2 cut(s) 356, 1001
DseDI GACNNNNNNGTC 2 cut(s) 356, 1001
Eam1104I CTCTTC 2 cut(s) 570, 1147
EarI CTCTTC 2 cut(s) 570, 1147
Eco47I GGWCC 2 cut(s) 431, 860
Eco47III AGCGCT 1 cut(s) 924
Eco57I CTGAAG 1 cut(s) 777
EcoNI CCTNNNNNAGG 1 cut(s) 1115
EcoO109I RGGNCCY 2 cut(s) 431, 860
EcoRII CCWGG 4 cut(s) 433, 529, 1060, 1081
FaeI CATG 6 cut(s) 71, 364, 394, 609, 1046, 1074
FaqI GGGAC 1 cut(s) 873
FatI CATG 6 cut(s) 67, 360, 390, 605, 1042, 1070
FauNDI CATATG 1 cut(s) 628
Fnu4HI GCNGC 2 cut(s) 1134, 1137
FokI GGATG 5 cut(s) 56, 526, 730, 738, 1133
Fsp4HI GCNGC 2 cut(s) 1134, 1137
FspBI CTAG 1 cut(s) 15
GlaI GCGC 2 cut(s) 924, 1069
GluI GCNGC 2 cut(s) 1134, 1137
GsuI CTGGAG 2 cut(s) 366, 429
HaeII RGCGCY 1 cut(s) 926
HaeIII GGCC 2 cut(s) 983, 1110
HapII CCGG 1 cut(s) 543
HhaI GCGC 2 cut(s) 925, 1070
Hin1II CATG 6 cut(s) 71, 364, 394, 609, 1046, 1074
Hin6I GCGC 2 cut(s) 923, 1068
HinP1I GCGC 2 cut(s) 923, 1068
HincII GTYRAC 2 cut(s) 440, 688
HindII GTYRAC 2 cut(s) 440, 688
HindIII AAGCTT 2 cut(s) 708, 986
HinfI GANTC 5 cut(s) 319, 350, 1010, 1057, 1095
HpaII CCGG 1 cut(s) 543
HphI GGTGA 2 cut(s) 175, 1066
Hpy166II GTNNAC 4 cut(s) 440, 619, 688, 1024
Hpy188I TCNGA 5 cut(s) 490, 583, 757, 938, 1015
Hpy188III TCNNGA 9 cut(s) 15, 52, 400, 458, 543, 557, 794, 898, 992
Hpy8I GTNNAC 4 cut(s) 440, 619, 688, 1024
HpyAV CCTTC 7 cut(s) 19, 34, 195, 206, 406, 709, 956
HpyCH4III ACNGT 3 cut(s) 486, 520, 945
HpyCH4IV ACGT 1 cut(s) 26
HpyCH4V TGCA 8 cut(s) 253, 273, 296, 368, 464, 591, 1128, 1139
HpyF10VI GCNNNNNNNGC 1 cut(s) 308
HpyF3I CTNAG 4 cut(s) 33, 57, 227, 1148
HpySE526I ACGT 1 cut(s) 26
Hsp92II CATG 6 cut(s) 71, 364, 394, 609, 1046, 1074
HspAI GCGC 2 cut(s) 923, 1068
Kpn2I TCCGGA 1 cut(s) 542
Kzo9I GATC 2 cut(s) 64, 602
LmnI GCTCC 1 cut(s) 181
Lsp1109I GCAGC 2 cut(s) 1120, 1123
LweI GCATC 2 cut(s) 331, 451
MaeI CTAG 1 cut(s) 15
MaeII ACGT 1 cut(s) 26
MaeIII GTNAC 4 cut(s) 91, 289, 412, 514
MalI GATC 2 cut(s) 66, 604
MboI GATC 2 cut(s) 64, 602
MboII GAAGA 5 cut(s) 125, 270, 557, 1164, 1175
MhlI GDGCHC 1 cut(s) 1082
MluCI AATT 6 cut(s) 189, 909, 1017, 1087, 1166, 1189
MlyI GAGTC 2 cut(s) 344, 1004
MmeI TCCRAC 1 cut(s) 453
MroI TCCGGA 1 cut(s) 542
MroXI GAANNNNTTC 2 cut(s) 564, 1020
MseI TTAA 5 cut(s) 525, 570, 653, 951, 1192
MslI CAYNNNNRTG 3 cut(s) 663, 1041, 1075
MspCI CTTAAG 1 cut(s) 569
MspI CCGG 1 cut(s) 543
MspR9I CCNGG 4 cut(s) 435, 531, 1062, 1083
Mva1269I GAATGC 1 cut(s) 658
MvaI CCWGG 4 cut(s) 435, 531, 1062, 1083
MwoI GCNNNNNNNGC 1 cut(s) 308
NdeI CATATG 1 cut(s) 628
NdeII GATC 2 cut(s) 64, 602
NlaIII CATG 6 cut(s) 71, 364, 394, 609, 1046, 1074
NlaIV GGNNCC 5 cut(s) 183, 432, 547, 861, 1079
NmuCI GTSAC 1 cut(s) 514
NspI RCATGY 2 cut(s) 394, 1074
PciI ACATGT 1 cut(s) 390
PctI GAATGC 1 cut(s) 658
PdmI GAANNNNTTC 2 cut(s) 564, 1020
PfeI GAWTC 3 cut(s) 319, 1057, 1095
PfoI TCCNGGA 1 cut(s) 1060
PkrI GCNGC 2 cut(s) 1135, 1138
PleI GAGTC 2 cut(s) 344, 1004
PpsI GAGTC 2 cut(s) 344, 1004
PpuMI RGGWCCY 2 cut(s) 431, 860
PscI ACATGT 1 cut(s) 390
Psp5II RGGWCCY 2 cut(s) 431, 860
Psp6I CCWGG 4 cut(s) 433, 529, 1060, 1081
PspGI CCWGG 4 cut(s) 433, 529, 1060, 1081
PspN4I GGNNCC 5 cut(s) 183, 432, 547, 861, 1079
PspPI GGNCC 3 cut(s) 431, 860, 981
PspPPI RGGWCCY 2 cut(s) 431, 860
PstI CTGCAG 2 cut(s) 298, 1141
PstNI CAGNNNCTG 1 cut(s) 154
RsaI GTAC 2 cut(s) 100, 775
RsaNI GTAC 2 cut(s) 99, 774
RseI CAYNNNNRTG 3 cut(s) 663, 1041, 1075
SaqAI TTAA 5 cut(s) 525, 570, 653, 951, 1192
SatI GCNGC 2 cut(s) 1134, 1137
Sau3AI GATC 2 cut(s) 64, 602
Sau96I GGNCC 3 cut(s) 431, 860, 981
SchI GAGTC 2 cut(s) 344, 1004
ScrFI CCNGG 4 cut(s) 435, 531, 1062, 1083
SduI GDGCHC 1 cut(s) 1082
SfaNI GCATC 2 cut(s) 331, 451
SfcI CTRYAG 2 cut(s) 294, 1137
SinI GGWCC 2 cut(s) 431, 860
SmiMI CAYNNNNRTG 3 cut(s) 663, 1041, 1075
SmlI CTYRAG 1 cut(s) 569
SmoI CTYRAG 1 cut(s) 569
Sse9I AATT 6 cut(s) 189, 909, 1017, 1087, 1166, 1189
SspMI CTAG 1 cut(s) 15
StyD4I CCNGG 4 cut(s) 433, 529, 1060, 1081
TaaI ACNGT 3 cut(s) 486, 520, 945
TaiI ACGT 1 cut(s) 29
TaqI TCGA 1 cut(s) 51
TasI AATT 6 cut(s) 189, 909, 1017, 1087, 1166, 1189
TfiI GAWTC 3 cut(s) 319, 1057, 1095
Tru1I TTAA 5 cut(s) 525, 570, 653, 951, 1192
Tru9I TTAA 5 cut(s) 525, 570, 653, 951, 1192
TscAI CASTG 3 cut(s) 159, 489, 1031
TseFI GTSAC 1 cut(s) 514
TseI GCWGC 2 cut(s) 1133, 1136
Tsp45I GTSAC 1 cut(s) 514
TspDTI ATGAA 2 cut(s) 119, 225
TspRI CASTG 3 cut(s) 159, 489, 1031
Vha464I CTTAAG 1 cut(s) 569
VpaK11BI GGWCC 2 cut(s) 431, 860
XagI CCTNNNNNAGG 1 cut(s) 1115
XapI RAATTY 1 cut(s) 1087
XbaI TCTAGA 1 cut(s) 14
XceI RCATGY 2 cut(s) 394, 1074
XcmI CCANNNNNNNNNTGG 2 cut(s) 151, 465
XmnI GAANNNNTTC 2 cut(s) 564, 1020
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.