Prupe.3G075300_v2.0.a1

Bifunctional aspartate aminotransferase and glutamate aspartate-prephenate

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
5526707 .. 5532938
6232 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G075300.1

Sequence Viewer

Length: 1185 bp
ATGGGTTCATATGGAAAACTTGCAAAGAGGGCTGTGGAGACTGAGATGCCGATCATGGTTCAGATACAACAATTGGTTCGAGGAGCCAAGAATGCTGTGTCACTGGCCCAGGGAGTAGTTCACTGGCAACCACCCAAACAGGCTTTGGATAAGGTGAAAGAACTTGTATGGGAGCCTTCAATTAGTCGTTACGGTGCTGATGAAGGTATACTTGAACTCAGGGAGGCATTGGTAAAAAAGTTGCATAATGAAAATAAGTTGTACAAATCTTCAGTGATGGTTACTTCAGGTGCAAATCAGGCATTTGTGAACCTTGTTCTTACATTGTGTGATTCCGGGGACTCTGTGGTTATGTTTGCACCATACTACTTCAATGCCTACATGTCCTTCCAGATGACCGGCGTGACTAATATATTGGTGGGTCCTGGCCACCCAGAGACACTTTACCCAGATGCAGACTGGTTGGAGAAAACGTTATCGGAAACAAAACCAACCCCAAAACTTGTTACGGTTGTTAATCCTGGCAACCCAAGTGGAACCTATATTCCGGACCCTCTTCTTAAGAGGATTTCAGATATTTGTAGAGACGCTGGATCATGGCTTGTTGTGGATAATACATACGAGTATTTTATGTATGATGATTTGAAACACACATGTGTGGAGGGAAATCACATAGTAAACATTTTTTCCTTCTCGAAAGCTTATGGGATGATGGGATGGCGAGTTGGATATATAGCATACCCATCAGAAGTAGAGGGTTTTGCTACCCAACTCCTCAAAGTTCAAGATAACATTCCCATCTGTGCTTCAATAATTTCACAGTACCTTGCGCTCCACTCATTGGAAATGGGACCCGAATGGGTCACTGAACGAGTGAAAGGTCTTGTCAAGAATAAAGAAATTGTTCTAGAAGCGCTTTCCCCTCTCGGAAAAGATGCTGTTAAAGGTGGAGAAGGTGCTATATACTTGTGGGCAAAGCTTCCGGACAAATATGCAGATGACGATAAATTTGTTCACTGGCTTGCTCACAGGCATGGGGTGGTGGTGATCCCCGGAAGTGCGTGTGGGTGCCCAGGAAATGTGAGAATCTCCTTTGGTGGCTTGCTAGAGGATGACTGCAAAGCTGCCGCAGAAAGGCTGAGGAGAGGGTTAGAAGAATTGATCAGAGATGGAATGGTTCAGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

395

Amino Acids

43.64

Weight (kDa)

5.9

Isoelectric Point (pI)

30.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1068
AccB7I CCANNNNNTGG 1 cut(s) 841
AccI GTMKAC 1 cut(s) 208
AccIII TCCGGA 2 cut(s) 547, 982
AciI CCGC 1 cut(s) 1128
AclI AACGTT 1 cut(s) 473
AclWI GGATC 2 cut(s) 601, 1042
AcoI YGGCCR 1 cut(s) 427
AcsI RAATTY 1 cut(s) 1007
AcuI CTGAAG 2 cut(s) 255, 270
AfaI GTAC 2 cut(s) 263, 824
AfeI AGCGCT 1 cut(s) 915
AfiI CCNNNNNNNGG 2 cut(s) 841, 1134
AflII CTTAAG 1 cut(s) 560
AflIII ACRYGT 2 cut(s) 381, 653
AgsI TTSAA 6 cut(s) 180, 215, 373, 646, 785, 810
AjnI CCWGG 4 cut(s) 108, 424, 520, 1072
AleI CACNNNNGTG 2 cut(s) 654, 656
AloI GAACNNNNNNTCC 2 cut(s) 529, 561
AluBI AGCT 3 cut(s) 701, 979, 1124
AluI AGCT 3 cut(s) 701, 979, 1124
Alw26I GTCTC 3 cut(s) 32, 431, 579
AlwI GGATC 2 cut(s) 601, 1042
Aor13HI TCCGGA 2 cut(s) 547, 982
Aor51HI AGCGCT 1 cut(s) 915
AoxI GGCC 2 cut(s) 105, 427
ApeKI GCWGC 1 cut(s) 1124
ApoI RAATTY 1 cut(s) 1007
ArsI GACNNNNNNTTYG 2 cut(s) 992, 1024
Asp700I GAANNNNTTC 1 cut(s) 903
AspLEI GCGC 2 cut(s) 832, 916
AspS9I GGNCC 4 cut(s) 106, 422, 550, 851
AsuC2I CCSGG 2 cut(s) 337, 1053
AsuHPI GGTGA 2 cut(s) 166, 1057
AvaII GGWCC 3 cut(s) 422, 550, 851
BaeGI GKGCMC 1 cut(s) 1073
BalI TGGCCA 1 cut(s) 429
BanI GGYRCC 1 cut(s) 1068
BbvCI CCTCAGC 1 cut(s) 1139
BbvI GCAGC 1 cut(s) 1111
BccI CCATC 6 cut(s) 271, 706, 711, 751, 806, 1163
BciT130I CCWGG 4 cut(s) 110, 426, 522, 1074
BclI TGATCA 1 cut(s) 1161
BcnI CCSGG 2 cut(s) 337, 1053
BcoDI GTCTC 3 cut(s) 32, 431, 579
BfaI CTAG 2 cut(s) 908, 1106
BfoI RGCGCY 1 cut(s) 917
BfrI CTTAAG 1 cut(s) 560
BisI GCNGC 2 cut(s) 1125, 1128
BlsI GCNGC 2 cut(s) 1126, 1129
Bme1390I CCNGG 6 cut(s) 110, 337, 426, 522, 1053, 1074
Bme18I GGWCC 3 cut(s) 422, 550, 851
BmgT120I GGNCC 4 cut(s) 106, 422, 550, 851
BmiI GGNNCC 8 cut(s) 85, 174, 423, 538, 552, 852, 853, 1070
BmrFI CCNGG 6 cut(s) 110, 337, 426, 522, 1053, 1074
BmsI GCATC 3 cut(s) 36, 442, 925
Bpu10I CCTNAGC 1 cut(s) 1139
BpuMI CCSGG 2 cut(s) 337, 1053
BsaBI GATNNNNATC 1 cut(s) 50
BsaJI CCNNGG 5 cut(s) 108, 109, 336, 1051, 1072
BsaWI WCCGGW 2 cut(s) 547, 982
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 2 cut(s) 841, 1134
Bse118I RCCGGY 1 cut(s) 398
Bse1I ACTGG 4 cut(s) 108, 128, 464, 1022
Bse8I GATNNNNATC 1 cut(s) 50
BseAI TCCGGA 2 cut(s) 547, 982
BseBI CCWGG 4 cut(s) 110, 426, 522, 1074
BseDI CCNNGG 5 cut(s) 108, 109, 336, 1051, 1072
BseGI GGATG 3 cut(s) 714, 722, 1117
BseJI GATNNNNATC 1 cut(s) 50
BseLI CCNNNNNNNGG 2 cut(s) 841, 1134
BseMII CTCAG 3 cut(s) 33, 232, 1130
BseNI ACTGG 4 cut(s) 108, 128, 464, 1022
BseRI GAGGAG 3 cut(s) 96, 764, 1156
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 1 cut(s) 1111
BshFI GGCC 2 cut(s) 107, 429
BshNI GGYRCC 1 cut(s) 1068
BsiSI CCGG 5 cut(s) 336, 399, 548, 983, 1053
BslFI GGGAC 2 cut(s) 353, 864
BslI CCNNNNNNNGG 2 cut(s) 841, 1134
BsmAI GTCTC 3 cut(s) 32, 431, 579
BsmBI CGTCTC 1 cut(s) 579
BsmFI GGGAC 2 cut(s) 353, 864
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 2 cut(s) 107, 429
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp13I TCCGGA 2 cut(s) 547, 982
Bsp1407I TGTACA 1 cut(s) 261
Bsp143I GATC 4 cut(s) 51, 593, 1047, 1161
BspACI CCGC 1 cut(s) 1128
BspANI GGCC 2 cut(s) 107, 429
BspCNI CTCAG 3 cut(s) 34, 231, 1131
BspEI TCCGGA 2 cut(s) 547, 982
BspLI GGNNCC 8 cut(s) 85, 174, 423, 538, 552, 852, 853, 1070
BspPI GGATC 2 cut(s) 601, 1042
BspT107I GGYRCC 1 cut(s) 1068
BspTI CTTAAG 1 cut(s) 560
BsrFI RCCGGY 1 cut(s) 398
BsrGI TGTACA 1 cut(s) 261
BsrI ACTGG 4 cut(s) 108, 128, 464, 1022
BssAI RCCGGY 1 cut(s) 398
BssECI CCNNGG 5 cut(s) 108, 109, 336, 1051, 1072
BssMI GATC 4 cut(s) 51, 593, 1047, 1161
BssNAI GTATAC 1 cut(s) 209
Bst1107I GTATAC 1 cut(s) 209
Bst2UI CCWGG 4 cut(s) 110, 426, 522, 1074
Bst4CI ACNGT 3 cut(s) 194, 511, 822
Bst6I CTCTTC 1 cut(s) 561
BstAFI CTTAAG 1 cut(s) 560
BstAUI TGTACA 1 cut(s) 261
BstC8I GCNNGC 2 cut(s) 1023, 1103
BstDEI CTNAG 3 cut(s) 42, 218, 1139
BstF5I GGATG 3 cut(s) 714, 722, 1117
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 2 cut(s) 832, 916
BstKTI GATC 4 cut(s) 54, 596, 1050, 1164
BstMAI GTCTC 3 cut(s) 32, 431, 579
BstMBI GATC 4 cut(s) 51, 593, 1047, 1161
BstMWI GCNNNNNNNGC 3 cut(s) 29, 92, 299
BstNI CCWGG 4 cut(s) 110, 426, 522, 1074
BstNSI RCATGY 2 cut(s) 385, 657
BstSCI CCNGG 6 cut(s) 108, 335, 424, 520, 1051, 1072
BstSLI GKGCMC 1 cut(s) 1073
BstV1I GCAGC 1 cut(s) 1111
BstZ17I GTATAC 1 cut(s) 209
BsuRI GGCC 2 cut(s) 107, 429
BtsCI GGATG 3 cut(s) 714, 722, 1117
BtsIMutI CAGTG 5 cut(s) 101, 121, 279, 864, 1015
Cac8I GCNNGC 2 cut(s) 1023, 1103
CfoI GCGC 2 cut(s) 832, 916
Cfr10I RCCGGY 1 cut(s) 398
Cfr13I GGNCC 4 cut(s) 106, 422, 550, 851
CseI GACGC 1 cut(s) 596
Csp6I GTAC 2 cut(s) 262, 823
CspCI CAANNNNNGTGG 2 cut(s) 514, 549
CviAII CATG 5 cut(s) 55, 382, 597, 654, 1034
CviQI GTAC 2 cut(s) 262, 823
DdeI CTNAG 3 cut(s) 42, 218, 1139
DpnI GATC 4 cut(s) 53, 595, 1049, 1163
DpnII GATC 4 cut(s) 51, 593, 1047, 1161
EaeI YGGCCR 1 cut(s) 427
Eam1104I CTCTTC 1 cut(s) 561
EarI CTCTTC 1 cut(s) 561
Eco47I GGWCC 3 cut(s) 422, 550, 851
Eco47III AGCGCT 1 cut(s) 915
Eco57I CTGAAG 2 cut(s) 255, 270
EcoO109I RGGNCCY 2 cut(s) 422, 851
EcoRII CCWGG 4 cut(s) 108, 424, 520, 1072
Esp3I CGTCTC 1 cut(s) 579
FaeI CATG 5 cut(s) 58, 385, 600, 657, 1037
FalI AAGNNNNNCTT 2 cut(s) 195, 227
FaqI GGGAC 2 cut(s) 353, 864
FatI CATG 5 cut(s) 54, 381, 596, 653, 1033
FauNDI CATATG 1 cut(s) 10
FbaI TGATCA 1 cut(s) 1161
FblI GTMKAC 1 cut(s) 208
Fnu4HI GCNGC 2 cut(s) 1125, 1128
FokI GGATG 3 cut(s) 721, 729, 1124
Fsp4HI GCNGC 2 cut(s) 1125, 1128
FspBI CTAG 2 cut(s) 908, 1106
GlaI GCGC 2 cut(s) 831, 915
GluI GCNGC 2 cut(s) 1125, 1128
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 2 cut(s) 107, 429
HapII CCGG 5 cut(s) 336, 399, 548, 983, 1053
HgaI GACGC 1 cut(s) 596
HhaI GCGC 2 cut(s) 832, 916
Hin1II CATG 5 cut(s) 58, 385, 600, 657, 1037
Hin6I GCGC 2 cut(s) 830, 914
HinP1I GCGC 2 cut(s) 830, 914
HindIII AAGCTT 2 cut(s) 699, 977
HinfI GANTC 3 cut(s) 332, 341, 1086
HpaII CCGG 5 cut(s) 336, 399, 548, 983, 1053
HphI GGTGA 2 cut(s) 166, 1057
Hpy166II GTNNAC 5 cut(s) 121, 209, 310, 679, 1015
Hpy188I TCNGA 6 cut(s) 63, 481, 574, 748, 929, 1166
Hpy188III TCNNGA 7 cut(s) 391, 548, 694, 785, 889, 908, 983
Hpy8I GTNNAC 5 cut(s) 121, 209, 310, 679, 1015
HpyAV CCTTC 5 cut(s) 186, 197, 397, 700, 947
HpyCH4III ACNGT 3 cut(s) 194, 511, 822
HpyCH4IV ACGT 1 cut(s) 473
HpyCH4V TGCA 7 cut(s) 23, 244, 293, 359, 455, 995, 1119
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 92, 299
HpyF3I CTNAG 3 cut(s) 42, 218, 1139
HpySE526I ACGT 1 cut(s) 473
Hsp92II CATG 5 cut(s) 58, 385, 600, 657, 1037
HspAI GCGC 2 cut(s) 830, 914
KflI GGGWCCC 1 cut(s) 851
Kpn2I TCCGGA 2 cut(s) 547, 982
Ksp22I TGATCA 1 cut(s) 1161
Kzo9I GATC 4 cut(s) 51, 593, 1047, 1161
LmnI GCTCC 3 cut(s) 83, 172, 837
Lsp1109I GCAGC 1 cut(s) 1111
LweI GCATC 3 cut(s) 36, 442, 925
MaeI CTAG 2 cut(s) 908, 1106
MaeII ACGT 1 cut(s) 473
MaeIII GTNAC 6 cut(s) 99, 188, 280, 403, 505, 862
MalI GATC 4 cut(s) 53, 595, 1049, 1163
MboI GATC 4 cut(s) 51, 593, 1047, 1161
MboII GAAGA 3 cut(s) 261, 548, 1166
MfeI CAATTG 1 cut(s) 71
MhlI GDGCHC 1 cut(s) 1073
MlsI TGGCCA 1 cut(s) 429
MluCI AATT 6 cut(s) 71, 180, 813, 900, 1007, 1157
MluNI TGGCCA 1 cut(s) 429
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 2 cut(s) 444, 706
Mox20I TGGCCA 1 cut(s) 429
MroI TCCGGA 2 cut(s) 547, 982
MroXI GAANNNNTTC 1 cut(s) 903
MscI TGGCCA 1 cut(s) 429
MseI TTAA 3 cut(s) 516, 561, 942
MslI CAYNNNNRTG 3 cut(s) 654, 656, 1032
Msp20I TGGCCA 1 cut(s) 429
MspCI CTTAAG 1 cut(s) 560
MspI CCGG 5 cut(s) 336, 399, 548, 983, 1053
MspR9I CCNGG 6 cut(s) 110, 337, 426, 522, 1053, 1074
MunI CAATTG 1 cut(s) 71
Mva1269I GAATGC 1 cut(s) 97
MvaI CCWGG 4 cut(s) 110, 426, 522, 1074
MwoI GCNNNNNNNGC 3 cut(s) 29, 92, 299
NciI CCSGG 2 cut(s) 337, 1053
NdeI CATATG 1 cut(s) 10
NdeII GATC 4 cut(s) 51, 593, 1047, 1161
NlaIII CATG 5 cut(s) 58, 385, 600, 657, 1037
NlaIV GGNNCC 8 cut(s) 85, 174, 423, 538, 552, 852, 853, 1070
NmuCI GTSAC 3 cut(s) 99, 403, 862
NspI RCATGY 2 cut(s) 385, 657
OliI CACNNNNGTG 2 cut(s) 654, 656
PasI CCCWGGG 1 cut(s) 109
PciI ACATGT 2 cut(s) 381, 653
PctI GAATGC 1 cut(s) 97
PdmI GAANNNNTTC 1 cut(s) 903
PfeI GAWTC 2 cut(s) 332, 1086
PflMI CCANNNNNTGG 1 cut(s) 841
PkrI GCNGC 2 cut(s) 1126, 1129
PleI GAGTC 1 cut(s) 335
PpsI GAGTC 1 cut(s) 335
PpuMI RGGWCCY 2 cut(s) 422, 851
PscI ACATGT 2 cut(s) 381, 653
Psp1406I AACGTT 1 cut(s) 473
Psp5II RGGWCCY 2 cut(s) 422, 851
Psp6I CCWGG 4 cut(s) 108, 424, 520, 1072
PspGI CCWGG 4 cut(s) 108, 424, 520, 1072
PspN4I GGNNCC 8 cut(s) 85, 174, 423, 538, 552, 852, 853, 1070
PspPI GGNCC 4 cut(s) 106, 422, 550, 851
PspPPI RGGWCCY 2 cut(s) 422, 851
RsaI GTAC 2 cut(s) 263, 824
RsaNI GTAC 2 cut(s) 262, 823
RseI CAYNNNNRTG 3 cut(s) 654, 656, 1032
SaqAI TTAA 3 cut(s) 516, 561, 942
SatI GCNGC 2 cut(s) 1125, 1128
Sau3AI GATC 4 cut(s) 51, 593, 1047, 1161
Sau96I GGNCC 4 cut(s) 106, 422, 550, 851
SchI GAGTC 1 cut(s) 335
ScrFI CCNGG 6 cut(s) 110, 337, 426, 522, 1053, 1074
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 3 cut(s) 36, 442, 925
SinI GGWCC 3 cut(s) 422, 550, 851
SmiMI CAYNNNNRTG 3 cut(s) 654, 656, 1032
SmlI CTYRAG 1 cut(s) 560
SmoI CTYRAG 1 cut(s) 560
Sse9I AATT 6 cut(s) 71, 180, 813, 900, 1007, 1157
SsiI CCGC 1 cut(s) 1128
SspMI CTAG 2 cut(s) 908, 1106
StyD4I CCNGG 6 cut(s) 108, 335, 424, 520, 1051, 1072
TaaI ACNGT 3 cut(s) 194, 511, 822
TaiI ACGT 1 cut(s) 476
TaqI TCGA 2 cut(s) 79, 695
TasI AATT 6 cut(s) 71, 180, 813, 900, 1007, 1157
TatI WGTACW 1 cut(s) 261
TauI GCSGC 1 cut(s) 1130
TfiI GAWTC 2 cut(s) 332, 1086
Tru1I TTAA 3 cut(s) 516, 561, 942
Tru9I TTAA 3 cut(s) 516, 561, 942
TscAI CASTG 5 cut(s) 108, 128, 279, 871, 1022
TseFI GTSAC 3 cut(s) 99, 403, 862
TseI GCWGC 1 cut(s) 1124
Tsp45I GTSAC 3 cut(s) 99, 403, 862
TspDTI ATGAA 2 cut(s) 216, 264
TspRI CASTG 5 cut(s) 108, 128, 279, 871, 1022
Van91I CCANNNNNTGG 1 cut(s) 841
Vha464I CTTAAG 1 cut(s) 560
VpaK11BI GGWCC 3 cut(s) 422, 550, 851
XapI RAATTY 1 cut(s) 1007
XbaI TCTAGA 1 cut(s) 907
XceI RCATGY 2 cut(s) 385, 657
XcmI CCANNNNNNNNNTGG 2 cut(s) 142, 456
XmiI GTMKAC 1 cut(s) 208
XmnI GAANNNNTTC 1 cut(s) 903
XspI CTAG 2 cut(s) 908, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.