Rh2AG388800

Bifunctional aspartate aminotransferase and glutamate aspartate-prephenate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0007427
Physical Location & Seq
Reverse (-)
58230764 .. 58237171
6408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG388800.1

Sequence Viewer

Length: 957 bp
ATGTTACAGTTGCAAAAGGAAAACAAGTTATGCAAATCTTCGGTTATGGTGACTGCAGGGGCAAATCAGGCATTTGTGAATCTTGTTCTTACATTGTGTGATGCTGGAGACTCTGTTGTCATGTTTGCACCATACTACTTCAATGCCTACATGTCCTTCCAGATGACTGGAGTTACTAATATACTTGTGGGTCCTGGTCAACCAGATACACTTTATCCAGATGCAGACTGGTTGGAGAAAACACTGTCAGAAACAAAACCAACCCCAAAACTTGTCACAGTTGTGAATCCTGGCAACCCATCCGGAACCTACATTCCAGAACCTCTTCTTAAGAGGATTTCAGATATTTGCAGAGAGGCTGGATCATGGCTTGTTGTGGACAATACATACGAGTATTTTATGTATGATGATTTAAAGCATTCTTGTGTGGAGGGTAATCACATTGTCAACATCTTTTCCTTCTCAAAAGCTTATGGGATGATGGGATGGCGAGTTGGCTATATAGCATACCCATCTGAAGCAGAGGGCTTTGGTATTCAACTCCTCAAAGTTCAAGATAACATTCCCATCTGTGCTTCAATACTTTCACAACATCTTGCCCTCTGCTCATTAGAAATGGGACCTGAATGGGTTGTTGAAAGAGTGAAAGGTCTTGTCAAGAACAGAGAAATTGTTTTAGAAGCGCTCTCCCCACTCGGAAAACAGTCTGTTAAAGGTGGAGAAGGTGCTATATACCTGTGGGCCAAGCTTCCAGACAAATATGTAGATGATGACTTTGAAATTGTTCGCTGGCTTGCTCACAGGCATGGGGTGGTGGTGATTCCTGGAAGCGCATGTGGGTGCCCTGGAAATTTGAGAATCTCCTTTGGTGGCCTGTTAGAGGATGACTGCAAAGCTGCTGCAGAGAGGCTGAGAAGAGGGTTAGAAGAATTGGTCAAAGATGGAATGGTCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000096 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006521 GO:0006555 GO:0006558 GO:0006568 GO:0006569 GO:0006570 GO:0006576 GO:0006586 GO:0006725 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009056 GO:0009058 GO:0009063 GO:0009066 GO:0009072 GO:0009074 GO:0009308 GO:0009310 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009641 GO:0009698 GO:0009850 GO:0009851 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010252 GO:0010326 GO:0010364 GO:0010366 GO:0010565 GO:0010600 GO:0010817 GO:0016054 GO:0016740 GO:0016769 GO:0017144 GO:0019222 GO:0019439 GO:0019748 GO:0019752 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0032350 GO:0032351 GO:0032353 GO:0033238 GO:0033239 GO:0034641 GO:0042402 GO:0042430 GO:0042436 GO:0042445 GO:0042446 GO:0042592 GO:0042762 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0045763 GO:0046218 GO:0046395 GO:0046483 GO:0046700 GO:0046885 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0090354 GO:0090356 GO:0090357 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901996 GO:1901997 GO:1902221
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aminotran_1_2

Protein Analysis

318

Amino Acids

35.12

Weight (kDa)

5.36

Isoelectric Point (pI)

37.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 12 - 304 1.1e-44 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 840
AccIII TCCGGA 1 cut(s) 302
AclWI GGATC 1 cut(s) 370
AcsI RAATTY 1 cut(s) 850
AcuI CTGAAG 1 cut(s) 537
AfeI AGCGCT 1 cut(s) 684
AfiI CCNNNNNNNGG 1 cut(s) 880
AflII CTTAAG 1 cut(s) 329
AflIII ACRYGT 1 cut(s) 150
AgsI TTSAA 6 cut(s) 142, 539, 554, 579, 638, 779
AjnI CCWGG 4 cut(s) 193, 289, 823, 844
AleI CACNNNNGTG 1 cut(s) 281
AloI GAACNNNNNNTCC 2 cut(s) 298, 330
AluBI AGCT 3 cut(s) 470, 748, 896
AluI AGCT 3 cut(s) 470, 748, 896
Alw26I GTCTC 1 cut(s) 102
AlwI GGATC 1 cut(s) 370
Aor13HI TCCGGA 1 cut(s) 302
Aor51HI AGCGCT 1 cut(s) 684
AoxI GGCC 2 cut(s) 741, 871
ApeKI GCWGC 2 cut(s) 896, 899
ApoI RAATTY 1 cut(s) 850
Asp700I GAANNNNTTC 2 cut(s) 324, 783
AspLEI GCGC 2 cut(s) 685, 833
AspS9I GGNCC 3 cut(s) 191, 620, 741
AsuHPI GGTGA 2 cut(s) 61, 829
AvaII GGWCC 2 cut(s) 191, 620
BaeGI GKGCMC 1 cut(s) 845
BanI GGYRCC 1 cut(s) 840
BbvI GCAGC 2 cut(s) 883, 886
BccI CCATC 6 cut(s) 307, 475, 480, 520, 575, 935
BciT130I CCWGG 4 cut(s) 195, 291, 825, 846
BcoDI GTCTC 1 cut(s) 102
BfmI CTRYAG 2 cut(s) 54, 900
BfoI RGCGCY 1 cut(s) 686
BfrI CTTAAG 1 cut(s) 329
BisI GCNGC 2 cut(s) 897, 900
BlsI GCNGC 2 cut(s) 898, 901
Bme1390I CCNGG 4 cut(s) 195, 291, 825, 846
Bme18I GGWCC 2 cut(s) 191, 620
BmgT120I GGNCC 3 cut(s) 191, 620, 741
BmiI GGNNCC 4 cut(s) 192, 307, 621, 842
BmrFI CCNGG 4 cut(s) 195, 291, 825, 846
BmsI GCATC 2 cut(s) 91, 211
BpmI CTGGAG 2 cut(s) 126, 189
BsaJI CCNNGG 1 cut(s) 844
BsaWI WCCGGW 1 cut(s) 302
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 1 cut(s) 880
Bse1I ACTGG 2 cut(s) 172, 233
BseAI TCCGGA 1 cut(s) 302
BseBI CCWGG 4 cut(s) 195, 291, 825, 846
BseDI CCNNGG 1 cut(s) 844
BseGI GGATG 4 cut(s) 299, 483, 491, 889
BseLI CCNNNNNNNGG 1 cut(s) 880
BseMII CTCAG 1 cut(s) 902
BseNI ACTGG 2 cut(s) 172, 233
BseRI GAGGAG 1 cut(s) 533
BseSI GKGCMC 1 cut(s) 845
BseXI GCAGC 2 cut(s) 883, 886
BshFI GGCC 2 cut(s) 743, 873
BshNI GGYRCC 1 cut(s) 840
BsiSI CCGG 1 cut(s) 303
BslFI GGGAC 1 cut(s) 633
BslI CCNNNNNNNGG 1 cut(s) 880
BsmAI GTCTC 1 cut(s) 102
BsmFI GGGAC 1 cut(s) 633
BsmI GAATGC 1 cut(s) 418
BsnI GGCC 2 cut(s) 743, 873
Bsp1286I GDGCHC 1 cut(s) 845
Bsp13I TCCGGA 1 cut(s) 302
Bsp143I GATC 1 cut(s) 362
BspANI GGCC 2 cut(s) 743, 873
BspCNI CTCAG 1 cut(s) 903
BspEI TCCGGA 1 cut(s) 302
BspLI GGNNCC 4 cut(s) 192, 307, 621, 842
BspMAI CTGCAG 2 cut(s) 58, 904
BspPI GGATC 1 cut(s) 370
BspT107I GGYRCC 1 cut(s) 840
BspTI CTTAAG 1 cut(s) 329
BsrI ACTGG 2 cut(s) 172, 233
BssECI CCNNGG 1 cut(s) 844
BssMI GATC 1 cut(s) 362
Bst2UI CCWGG 4 cut(s) 195, 291, 825, 846
Bst4CI ACNGT 4 cut(s) 9, 246, 280, 705
Bst6I CTCTTC 2 cut(s) 330, 910
BstAFI CTTAAG 1 cut(s) 329
BstC8I GCNNGC 2 cut(s) 791, 795
BstDEI CTNAG 1 cut(s) 911
BstENI CCTNNNNNAGG 1 cut(s) 878
BstF5I GGATG 4 cut(s) 299, 483, 491, 889
BstH2I RGCGCY 1 cut(s) 686
BstHHI GCGC 2 cut(s) 685, 833
BstKTI GATC 1 cut(s) 365
BstMAI GTCTC 1 cut(s) 102
BstMBI GATC 1 cut(s) 362
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstNI CCWGG 4 cut(s) 195, 291, 825, 846
BstNSI RCATGY 2 cut(s) 154, 837
BstSCI CCNGG 4 cut(s) 193, 289, 823, 844
BstSFI CTRYAG 2 cut(s) 54, 900
BstSLI GKGCMC 1 cut(s) 845
BstV1I GCAGC 2 cut(s) 883, 886
BstXI CCANNNNNNTGG 1 cut(s) 167
BsuRI GGCC 2 cut(s) 743, 873
BtsCI GGATG 4 cut(s) 299, 483, 491, 889
BtsIMutI CAGTG 1 cut(s) 242
Cac8I GCNNGC 2 cut(s) 791, 795
CfoI GCGC 2 cut(s) 685, 833
Cfr13I GGNCC 3 cut(s) 191, 620, 741
CviAII CATG 5 cut(s) 121, 151, 366, 806, 834
DdeI CTNAG 1 cut(s) 911
DpnI GATC 1 cut(s) 364
DpnII GATC 1 cut(s) 362
DraI TTTAAA 1 cut(s) 414
DrdI GACNNNNNNGTC 1 cut(s) 116
DseDI GACNNNNNNGTC 1 cut(s) 116
Eam1104I CTCTTC 2 cut(s) 330, 910
EarI CTCTTC 2 cut(s) 330, 910
Eco47I GGWCC 2 cut(s) 191, 620
Eco47III AGCGCT 1 cut(s) 684
Eco57I CTGAAG 1 cut(s) 537
EcoNI CCTNNNNNAGG 1 cut(s) 878
EcoO109I RGGNCCY 2 cut(s) 191, 620
EcoRII CCWGG 4 cut(s) 193, 289, 823, 844
FaeI CATG 5 cut(s) 124, 154, 369, 809, 837
FaqI GGGAC 1 cut(s) 633
FatI CATG 5 cut(s) 120, 150, 365, 805, 833
Fnu4HI GCNGC 2 cut(s) 897, 900
FokI GGATG 4 cut(s) 286, 490, 498, 896
Fsp4HI GCNGC 2 cut(s) 897, 900
GlaI GCGC 2 cut(s) 684, 832
GluI GCNGC 2 cut(s) 897, 900
GsuI CTGGAG 2 cut(s) 126, 189
HaeII RGCGCY 1 cut(s) 686
HaeIII GGCC 2 cut(s) 743, 873
HapII CCGG 1 cut(s) 303
HhaI GCGC 2 cut(s) 685, 833
Hin1II CATG 5 cut(s) 124, 154, 369, 809, 837
Hin6I GCGC 2 cut(s) 683, 831
HinP1I GCGC 2 cut(s) 683, 831
HincII GTYRAC 2 cut(s) 200, 448
HindII GTYRAC 2 cut(s) 200, 448
HindIII AAGCTT 2 cut(s) 468, 746
HinfI GANTC 5 cut(s) 79, 110, 286, 820, 858
HpaII CCGG 1 cut(s) 303
HphI GGTGA 2 cut(s) 61, 829
Hpy166II GTNNAC 3 cut(s) 200, 379, 448
Hpy188I TCNGA 4 cut(s) 250, 343, 517, 698
Hpy188III TCNNGA 7 cut(s) 160, 218, 303, 317, 554, 658, 752
Hpy8I GTNNAC 3 cut(s) 200, 379, 448
HpyAV CCTTC 3 cut(s) 166, 469, 716
HpyCH4III ACNGT 4 cut(s) 9, 246, 280, 705
HpyCH4V TGCA 8 cut(s) 13, 33, 56, 128, 224, 351, 891, 902
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 911
Hsp92II CATG 5 cut(s) 124, 154, 369, 809, 837
HspAI GCGC 2 cut(s) 683, 831
Kpn2I TCCGGA 1 cut(s) 302
Kzo9I GATC 1 cut(s) 362
Lsp1109I GCAGC 2 cut(s) 883, 886
LweI GCATC 2 cut(s) 91, 211
MaeIII GTNAC 4 cut(s) 3, 49, 172, 274
MalI GATC 1 cut(s) 364
MboI GATC 1 cut(s) 362
MboII GAAGA 4 cut(s) 30, 317, 927, 938
MhlI GDGCHC 1 cut(s) 845
MluCI AATT 4 cut(s) 669, 780, 850, 929
MlyI GAGTC 1 cut(s) 104
MmeI TCCRAC 1 cut(s) 213
MroI TCCGGA 1 cut(s) 302
MroXI GAANNNNTTC 2 cut(s) 324, 783
MseI TTAA 3 cut(s) 330, 413, 711
MslI CAYNNNNRTG 4 cut(s) 281, 423, 804, 838
MspCI CTTAAG 1 cut(s) 329
MspI CCGG 1 cut(s) 303
MspR9I CCNGG 4 cut(s) 195, 291, 825, 846
Mva1269I GAATGC 1 cut(s) 418
MvaI CCWGG 4 cut(s) 195, 291, 825, 846
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeII GATC 1 cut(s) 362
NlaIII CATG 5 cut(s) 124, 154, 369, 809, 837
NlaIV GGNNCC 4 cut(s) 192, 307, 621, 842
NmuCI GTSAC 2 cut(s) 49, 274
NspI RCATGY 2 cut(s) 154, 837
OliI CACNNNNGTG 1 cut(s) 281
PciI ACATGT 1 cut(s) 150
PctI GAATGC 1 cut(s) 418
PdmI GAANNNNTTC 2 cut(s) 324, 783
PfeI GAWTC 4 cut(s) 79, 286, 820, 858
PfoI TCCNGGA 1 cut(s) 823
PkrI GCNGC 2 cut(s) 898, 901
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
PpuMI RGGWCCY 2 cut(s) 191, 620
PscI ACATGT 1 cut(s) 150
Psp5II RGGWCCY 2 cut(s) 191, 620
Psp6I CCWGG 4 cut(s) 193, 289, 823, 844
PspGI CCWGG 4 cut(s) 193, 289, 823, 844
PspN4I GGNNCC 4 cut(s) 192, 307, 621, 842
PspPI GGNCC 3 cut(s) 191, 620, 741
PspPPI RGGWCCY 2 cut(s) 191, 620
PstI CTGCAG 2 cut(s) 58, 904
RseI CAYNNNNRTG 4 cut(s) 281, 423, 804, 838
SaqAI TTAA 3 cut(s) 330, 413, 711
SatI GCNGC 2 cut(s) 897, 900
Sau3AI GATC 1 cut(s) 362
Sau96I GGNCC 3 cut(s) 191, 620, 741
SchI GAGTC 1 cut(s) 104
ScrFI CCNGG 4 cut(s) 195, 291, 825, 846
SduI GDGCHC 1 cut(s) 845
SfaNI GCATC 2 cut(s) 91, 211
SfcI CTRYAG 2 cut(s) 54, 900
SinI GGWCC 2 cut(s) 191, 620
SmiMI CAYNNNNRTG 4 cut(s) 281, 423, 804, 838
SmlI CTYRAG 1 cut(s) 329
SmoI CTYRAG 1 cut(s) 329
Sse9I AATT 4 cut(s) 669, 780, 850, 929
StyD4I CCNGG 4 cut(s) 193, 289, 823, 844
TaaI ACNGT 4 cut(s) 9, 246, 280, 705
TasI AATT 4 cut(s) 669, 780, 850, 929
TfiI GAWTC 4 cut(s) 79, 286, 820, 858
Tru1I TTAA 3 cut(s) 330, 413, 711
Tru9I TTAA 3 cut(s) 330, 413, 711
TscAI CASTG 1 cut(s) 249
TseFI GTSAC 2 cut(s) 49, 274
TseI GCWGC 2 cut(s) 896, 899
Tsp45I GTSAC 2 cut(s) 49, 274
TspRI CASTG 1 cut(s) 249
Vha464I CTTAAG 1 cut(s) 329
VpaK11BI GGWCC 2 cut(s) 191, 620
XagI CCTNNNNNAGG 1 cut(s) 878
XapI RAATTY 1 cut(s) 850
XceI RCATGY 2 cut(s) 154, 837
XcmI CCANNNNNNNNNTGG 1 cut(s) 225
XmnI GAANNNNTTC 2 cut(s) 324, 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.