Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009004

Physical Location & Seq

Genomic Coordinates Forward (+)

2141329 .. 2146678

Gene Structure 5350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G05710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2973 bp

ATGTATTTAACCGCTTCATCTTCCGCTTCTTCCTCCATCATCCGAGCTGCTTCTTCTCGCTCTTCTTCTCTTTTCTCTTTCCGATCGGTTTTATCTCCCTCCGTTTCATCTACTTCTCCGTCGTCTCTTCTCGCTCGTAGATCTTTTGGTACCATTTCCCCTGCTTTCCGTCGCTGGAGCCATTCCTTTCACTCGAAACCATCTCCGTTTCGCTTCACCTCTCAGATCAGAGCTGTTTCTCCAGTCTTAGATCGTCTCCAGAGAACCTTCTCTTCCATGGCGTCAGAGCATCCGTTTAAAGGGATCTTCACTACACTTCCTAAGCCTGGTGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCTCTTAACGATCCACGAGTTGATAAACTTCCTTACTCTATTAGGATTCTGCTTGAATCTGCGATTCGTAATTGTGATAACTTTCAAGTTACTAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAAGACATCTCCTAAACAAGTAGAGATTCCTTTTAAACCAGCTCGTGTTCTTCTTCAGGACTTTACGGGAGTCCCAGCTGTTGTTGACCTTGCTTGTATGCGTGATGCGATGAATAAGCTGGGAAGTGATTCCAACAAAATCAATCCCTTGGTTCCGGTGGATCTTGTGATTGATCACTCGGTTCAAGTAGATGTAGCTCGATCAGAGAATGCAGTGCAAGCAAACATGGAGCTTGAGTTCCAGAGGAACAAGGAGAGGTTTGCTTTCCTTAAATGGGGTTCTACTGCGTTCCAGAACATGCTTGTTGTGCCTCCTGGCTCTGGTATTGTGCATCAGGTCAATTTGGAATATCTTGGAAGAGTTGTGTTCAATACCAAAGGCCTTCTCTACCCAGACAGCGTGGTTGGAACTGATTCACATACAACTATGATTGATGGTTTGGGAGTTGCTGGATGGGGTGTTGGGGGTATTGAAGCTGAGGCAACAATGCTTGGCCAGCCCATGAGTATGGTATTGCCTGGTGTTGTTGGATTCAAACTTGCCGGAAAAATGCGTAATGGTGTAACAGCTACTGATTTGGTTCTAACAGTGACTCAAATGCTGAGGAAGCATGGCGTTGTTGGAAAGTTTGTTGAGTTTTATGGTAATGGCATGAGTGGGCTGTCCCTAGCTGACAGGGCGACAATTGCCAATATGTCTCCCGAGTATGGTGCAACCATGGGCTTCTTCCCTGTGGATCATGTTACTCTACAATATCTCAAATTGACTGGAAGAAGCGATGAGACAGTGGCTATGATTGAAGCATATCTTCGGGCTAACAATATGTTTGTTGACTACAATGAGCCTCAGCAAGACCGGGTTTACTCGTCATATCTAGAACTGAATCTGGATGATGTTGAACCTTGCATTTCTGGACCAAAGCGGCCACATGATCGTGTTACTTTGAAGGAAATGAAAGCTGACTGGCATTCATGTCTTGACAGTAAAGTTGGGTTCAAGGGTTTTGCTATACCTAAAGAGGCACAAGAAAAAGTGGTAAATTTTTCGTTCGATGGACAACCAGCAGAGCTTAAACATGGAAGTGTGGTGATTGCTGCAATCACAAGCTGTACTAATACATCAAATCCCAGCGTCATGCTTGGTGCTGGTCTTGTTGCAAAGAAGGCTTGTGACCTTGGGCTACAGGTTAAGCCTTGGATAAAGACAAGTCTTGCTCCAGGCTCAGGAGTTGTTACAAAATACTTATTAAAGAGTGGATTGCAAGAATATCTGAATGAACAGGGTTTCAATATTGTCGGCTACGGGTGCACTACATGCATCGGGAATTCTGGGGAAATTAATGAATCAGTGGGAGCTGCTATTACCGAAAATGACATTGTGGCGGCTGCTGTGCTATCCGGTAACAGGAACTTTGAGGGGCGTGTTCATCCACTAACAAGAGCCAATTACCTTGCATCTCCTCCGTTGGTGGTTGCCTATGCTCTTGCTGGCACGGTTAACATTGACTTTGAAACGGAGCCTATTGGCAAAGGAAAGAATGGCAAGGACGTCTTCTTAAGAGATATCTGGCCAACCACGGAAGAAATTGCTGAGGTTGTTCAATCCAGTGTTTTGCCTGACATGTTCCGAGCAACGTACGAGTCAATCACCAAGGGTAACCCCATGTGGAATAAGCTGTCTGTTCCTGAGAATACCCTCTACTCATGGGATCCCAACTCAACTTACATTCACGAGCCTCCATACTTCAAGGACATGACCATGGATCCTCCTGGTCCACACAATGTGAAGGATGCTTACTGTTTACTCAATTTTGGGGACAGTATCACCACTGATCACATCTCACCAGCTGGAAACATCCAAAAGGACAGTCCTGCTGCAAAGTTTCTCATGGAGCGTGGCGTTGACCGTAAGGACTTCAACTCATATGGAAGTCGCCGTGGGAATGATGAAATAATGGCCAGAGGTACTTTTGCTAATATCCGTATCGTTAACAAGCTCATGAATGGTGAAGTTGGCCCTAAGACTGTTCACATTCCATCTGGAGAGAAGCTCTCAGTCTTTGACGCTGCCATGAGGTACAAGTCATCTGGTGAAGACACAATTATTCTGGCTGGAGCTGAGTATGGAAGTGGTAGCTCACGTGATTGGGCTGCCAAGGGACCCATGCTACAGGGTGTTAAAGCGGTGATTGCAAAGAGTTTTGAGAGGATTCACCGAAGCAACTTGGTGGGAATGGGAATCATCCCATTGTGCTTTAAGTCCGGTGAAGACGCAGATACTCTTGGATTGACTGGTCACGAACGCTACACGATCCATCTCCCAACCGATATCTCAGAGATAAGACCTGGCCAAGATGTTACCGTCACTACCGACAACGGAAAATCTTTCACTTGCACAGTCCGCTTCGACACAGAGGTGGAATTGGCATACTTTAACCATGGAGGCATACTTCCATATGTTATCAGAAACTTGAGCAAGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0003994 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0006082 GO:0006101 GO:0006102 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017076 GO:0017144 GO:0019752 GO:0030312 GO:0030554 GO:0031090 GO:0031667 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0035639 GO:0036094 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048856 GO:0050896 GO:0071704 GO:0071944 GO:0072350 GO:0090351 GO:0097159 GO:0097305 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700 GO:1990641

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map00720 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Aconitase Aconitase_C

Protein Analysis

990

Amino Acids

108.2

Weight (kDa)

6.72

Isoelectric Point (pI)

41.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aconitase	PF00330	157 - 660	1.1e-168	Aconitase family (aconitate hydratase)
Aconitase_C	PF00694	789 - 916	2.3e-40	Aconitase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05710
fragaria_vesca	FvH4_6g43190
malus_domestica	MD09G1108800.v1.1 MD17G1096700.v1.1
prunus_persica	Prupe.3G217300_v2.0.a1 Prupe.3G217300_v2.0.a1
pyrus_communis	pycom09g03120 pycom17g09260
rosa_chinensis	RchiOBHm_Chr2g0159291
rosa_laevigata	RLG00000021152
rosa_multiflora	Rmu_sc0004800.1_g000001 Rmu_sc0007806.1_g000010 Rmu_sc0010590.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090620
rosa_rugosa	Rorug02G0475700
rosa_samantha	Rh2AG542100 Rh2BG554700 Rh2CG524800 Rh2DG564400 Rh5AG522200
rosa_wichuraiana	Rw2G044840 Rw5G048460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2040
Acc36I	ACCTGC	1 cut(s)	370
Acc65I	GGTACC	1 cut(s)	149
AccB1I	GGYRCC	1 cut(s)	149
AciI	CCGC	6 cut(s)	12, 24, 1411, 1871, 2672, 2890
AclWI	GGATC	9 cut(s)	311, 368, 657, 1233, 2192, 2205, 2246, 2259, 2794
AcoI	YGGCCR	5 cut(s)	982, 1412, 2057, 2445, 2836
AcsI	RAATTY	3 cut(s)	338, 1528, 1813
AcuI	CTGAAG	1 cut(s)	527
AcvI	CACGTG	1 cut(s)	2630
AcyI	GRCGYC	2 cut(s)	281, 2037
AdeI	CACNNNGTG	1 cut(s)	2272
AfaI	GTAC	5 cut(s)	151, 1600, 2126, 2455, 2567
AfiI	CCNNNNNNNGG	8 cut(s)	299, 326, 332, 763, 809, 1196, 1712, 1893
AflII	CTTAAG	1 cut(s)	2044
AflIII	ACRYGT	1 cut(s)	2109
AjnI	CCWGG	6 cut(s)	325, 802, 1006, 1705, 2257, 2833
AleI	CACNNNNGTG	1 cut(s)	2903
AloI	GAACNNNNNNTCC	2 cut(s)	710, 742
Alw21I	GWGCWC	1 cut(s)	1799
Alw26I	GTCTC	4 cut(s)	129, 260, 1191, 1265
Alw44I	GTGCAC	1 cut(s)	1795
AlwI	GGATC	9 cut(s)	311, 368, 657, 1233, 2192, 2205, 2246, 2259, 2794
AlwNI	CAGNNNCTG	1 cut(s)	1061
Ama87I	CYCGRG	1 cut(s)	1190
AoxI	GGCC	7 cut(s)	868, 982, 1412, 2057, 2445, 2503, 2836
ApaLI	GTGCAC	1 cut(s)	1795
ApeKI	GCWGC	7 cut(s)	47, 1583, 1844, 1874, 2363, 2555, 2639
ApoI	RAATTY	3 cut(s)	338, 1528, 1813
ArsI	GACNNNNNNTTYG	2 cut(s)	2341, 2373
AseI	ATTAAT	1 cut(s)	1827
Asp700I	GAANNNNTTC	2 cut(s)	616, 901
Asp718I	GGTACC	1 cut(s)	149
AspS9I	GGNCC	4 cut(s)	1403, 2261, 2504, 2648
AsuC2I	CCSGG	1 cut(s)	1346
AvaI	CYCGRG	1 cut(s)	1190
AvaII	GGWCC	3 cut(s)	1403, 2261, 2648
BaeGI	GKGCMC	1 cut(s)	1799
BalI	TGGCCA	4 cut(s)	984, 2059, 2447, 2838
BamHI	GGATCC	2 cut(s)	2197, 2251
BanI	GGYRCC	1 cut(s)	149
BarI	GAAGNNNNNNTAC	2 cut(s)	2267, 2299
BauI	CACGAG	3 cut(s)	378, 531, 2219
BbrPI	CACGTG	1 cut(s)	2630
BbsI	GAAGAC	3 cut(s)	2032, 2589, 2763
Bbv12I	GWGCWC	1 cut(s)	1799
BbvCI	CCTCAGC	4 cut(s)	966, 1091, 1335, 2079
BbvI	GCAGC	7 cut(s)	34, 1570, 1831, 1861, 2350, 2542, 2626
BccI	CCATC	7 cut(s)	44, 208, 917, 936, 1535, 2533, 2811
BceAI	ACGGC	1 cut(s)	2409
BcgI	CGANNNNNNTGC	2 cut(s)	1181, 1215
BciT130I	CCWGG	6 cut(s)	327, 804, 1008, 1707, 2259, 2835
BclI	TGATCA	2 cut(s)	661, 2320
BcnI	CCSGG	1 cut(s)	1346
BcoDI	GTCTC	4 cut(s)	129, 260, 1191, 1265
BfaI	CTAG	2 cut(s)	1157, 1364
BfmI	CTRYAG	3 cut(s)	352, 1670, 2657
BfrI	CTTAAG	1 cut(s)	2044
BfuAI	ACCTGC	1 cut(s)	370
BglII	AGATCT	1 cut(s)	140
BisI	GCNGC	9 cut(s)	48, 1412, 1584, 1845, 1872, 1875, 2364, 2556, 2640
BlsI	GCNGC	9 cut(s)	49, 1413, 1585, 1846, 1873, 1876, 2365, 2557, 2641
Bme1390I	CCNGG	7 cut(s)	327, 804, 1008, 1346, 1707, 2259, 2835
Bme18I	GGWCC	3 cut(s)	1403, 2261, 2648
BmeT110I	CYCGRG	1 cut(s)	1190
BmgT120I	GGNCC	4 cut(s)	1403, 2261, 2504, 2648
BmiI	GGNNCC	8 cut(s)	151, 179, 642, 2007, 2199, 2253, 2649, 2650
BmrFI	CCNGG	7 cut(s)	327, 804, 1008, 1346, 1707, 2259, 2835
BmrI	ACTGGG	1 cut(s)	493
BmsI	GCATC	6 cut(s)	298, 583, 829, 1815, 1952, 2269
BmuI	ACTGGG	1 cut(s)	493
BpiI	GAAGAC	3 cut(s)	2032, 2589, 2763
BplI	GAGNNNNNCTC	4 cut(s)	2523, 2555, 2525, 2557
BpmI	CTGGAG	6 cut(s)	196, 225, 242, 1689, 2550, 2622
Bpu10I	CCTNAGC	6 cut(s)	321, 966, 1091, 1335, 1711, 2079
BpuEI	CTTGAG	1 cut(s)	743
BpuMI	CCSGG	1 cut(s)	1346
BsaAI	YACGTR	1 cut(s)	2630
BsaHI	GRCGYC	2 cut(s)	281, 2037
BsaWI	WCCGGW	3 cut(s)	643, 1886, 2750
BsaXI	ACNNNNNCTCC	2 cut(s)	710, 740
Bsc4I	CCNNNNNNNGG	8 cut(s)	299, 326, 332, 763, 809, 1196, 1712, 1893
Bse1I	ACTGG	6 cut(s)	242, 488, 1261, 1457, 2094, 2785
BseBI	CCWGG	6 cut(s)	327, 804, 1008, 1707, 2259, 2835
BseGI	GGATG	8 cut(s)	39, 289, 947, 1384, 1915, 2284, 2343, 2730
BseLI	CCNNNNNNNGG	8 cut(s)	299, 326, 332, 763, 809, 1196, 1712, 1893
BseNI	ACTGG	6 cut(s)	242, 488, 1261, 1457, 2094, 2785
BseRI	GAGGAG	1 cut(s)	1938
BseSI	GKGCMC	1 cut(s)	1799
BseXI	GCAGC	7 cut(s)	34, 1570, 1831, 1861, 2350, 2542, 2626
BseYI	CCCAGC	3 cut(s)	562, 607, 1616
Bsh1285I	CGRYCG	1 cut(s)	86
BshFI	GGCC	7 cut(s)	870, 984, 1414, 2059, 2447, 2505, 2838
BshNI	GGYRCC	1 cut(s)	149
BsiEI	CGRYCG	1 cut(s)	86
BsiHKAI	GWGCWC	1 cut(s)	1799
BsiHKCI	CYCGRG	1 cut(s)	1190
BsiSI	CCGG	5 cut(s)	644, 1032, 1345, 1887, 2751
BsiWI	CGTACG	1 cut(s)	2124
BslFI	GGGAC	4 cut(s)	545, 1138, 2318, 2661
BslI	CCNNNNNNNGG	8 cut(s)	299, 326, 332, 763, 809, 1196, 1712, 1893
BsmAI	GTCTC	4 cut(s)	129, 260, 1191, 1265
BsmBI	CGTCTC	2 cut(s)	129, 260
BsmFI	GGGAC	4 cut(s)	545, 1138, 2318, 2661
BsmI	GAATGC	2 cut(s)	703, 1456
BsnI	GGCC	7 cut(s)	870, 984, 1414, 2059, 2447, 2505, 2838
BsoBI	CYCGRG	1 cut(s)	1190
Bsp1286I	GDGCHC	1 cut(s)	1799
Bsp19I	CCATGG	4 cut(s)	276, 1206, 2247, 2926
BspACI	CCGC	6 cut(s)	12, 24, 1411, 1871, 2672, 2890
BspANI	GGCC	7 cut(s)	870, 984, 1414, 2059, 2447, 2505, 2838
BspHI	TCATGA	1 cut(s)	2487
BspLI	GGNNCC	8 cut(s)	151, 179, 642, 2007, 2199, 2253, 2649, 2650
BspMI	ACCTGC	1 cut(s)	370
BspPI	GGATC	9 cut(s)	311, 368, 657, 1233, 2192, 2205, 2246, 2259, 2794
BspQI	GCTCTTC	1 cut(s)	67
BspT107I	GGYRCC	1 cut(s)	149
BspTI	CTTAAG	1 cut(s)	2044
BsrI	ACTGG	6 cut(s)	242, 488, 1261, 1457, 2094, 2785
BssNI	GRCGYC	2 cut(s)	281, 2037
BssSI	CACGAG	3 cut(s)	378, 531, 2219
BssT1I	CCWWGG	9 cut(s)	276, 636, 1206, 1663, 1682, 2139, 2247, 2643, 2926
Bst2BI	CACGAG	3 cut(s)	378, 531, 2219
Bst2UI	CCWGG	6 cut(s)	327, 804, 1008, 1707, 2259, 2835
Bst6I	CTCTTC	4 cut(s)	67, 132, 277, 841
BstACI	GRCGYC	2 cut(s)	281, 2037
BstAFI	CTTAAG	1 cut(s)	2044
BstAPI	GCANNNNNTGC	1 cut(s)	1803
BstBAI	YACGTR	1 cut(s)	2630
BstC8I	GCNNGC	4 cut(s)	708, 986, 1978, 2966
BstDSI	CCRYGG	6 cut(s)	276, 1206, 2064, 2247, 2425, 2926
BstEII	GGTNACC	1 cut(s)	2144
BstF5I	GGATG	8 cut(s)	39, 289, 947, 1384, 1915, 2284, 2343, 2730
BstMAI	GTCTC	4 cut(s)	129, 260, 1191, 1265
BstMCI	CGRYCG	1 cut(s)	86
BstNI	CCWGG	6 cut(s)	327, 804, 1008, 1707, 2259, 2835
BstNSI	RCATGY	3 cut(s)	790, 1806, 2113
BstPI	GGTNACC	1 cut(s)	2144
BstSCI	CCNGG	7 cut(s)	325, 802, 1006, 1344, 1705, 2257, 2833
BstSFI	CTRYAG	3 cut(s)	352, 1670, 2657
BstSLI	GKGCMC	1 cut(s)	1799
BstV1I	GCAGC	7 cut(s)	34, 1570, 1831, 1861, 2350, 2542, 2626
BstV2I	GAAGAC	3 cut(s)	2032, 2589, 2763
BstX2I	RGATCY	5 cut(s)	140, 303, 649, 2197, 2251
BstXI	CCANNNNNNTGG	1 cut(s)	997
BstYI	RGATCY	5 cut(s)	140, 303, 649, 2197, 2251
BsuRI	GGCC	7 cut(s)	870, 984, 1414, 2059, 2447, 2505, 2838
BtgI	CCRYGG	6 cut(s)	276, 1206, 2064, 2247, 2425, 2926
BtgZI	GCGATG	2 cut(s)	611, 1281
BtsCI	GGATG	8 cut(s)	39, 289, 947, 1384, 1915, 2284, 2343, 2730
BtsI	GCAGTG	1 cut(s)	708
BtsIMutI	CAGTG	6 cut(s)	708, 1083, 1281, 1842, 2101, 2316
BveI	ACCTGC	1 cut(s)	370
Cac8I	GCNNGC	4 cut(s)	708, 986, 1978, 2966
CaiI	CAGNNNCTG	1 cut(s)	1061
CciI	TCATGA	1 cut(s)	2487
Cfr13I	GGNCC	4 cut(s)	1403, 2261, 2504, 2648
CseI	GACGC	4 cut(s)	270, 1609, 2561, 2768
Csp6I	GTAC	5 cut(s)	150, 1599, 2125, 2454, 2566
CviQI	GTAC	5 cut(s)	150, 1599, 2125, 2454, 2566
DraI	TTTAAA	2 cut(s)	298, 523
DraIII	CACNNNGTG	1 cut(s)	2272
EaeI	YGGCCR	5 cut(s)	982, 1412, 2057, 2445, 2836
Eam1104I	CTCTTC	4 cut(s)	67, 132, 277, 841
EarI	CTCTTC	4 cut(s)	67, 132, 277, 841
Eco130I	CCWWGG	9 cut(s)	276, 636, 1206, 1663, 1682, 2139, 2247, 2643, 2926
Eco147I	AGGCCT	1 cut(s)	870
Eco32I	GATATC	2 cut(s)	2053, 2818
Eco47I	GGWCC	3 cut(s)	1403, 2261, 2648
Eco57I	CTGAAG	1 cut(s)	527
Eco72I	CACGTG	1 cut(s)	2630
Eco88I	CYCGRG	1 cut(s)	1190
Eco91I	GGTNACC	1 cut(s)	2144
EcoO109I	RGGNCCY	1 cut(s)	2648
EcoO65I	GGTNACC	1 cut(s)	2144
EcoRI	GAATTC	2 cut(s)	338, 1813
EcoRII	CCWGG	6 cut(s)	325, 802, 1006, 1705, 2257, 2833
EcoRV	GATATC	2 cut(s)	2053, 2818
EcoT14I	CCWWGG	9 cut(s)	276, 636, 1206, 1663, 1682, 2139, 2247, 2643, 2926
EcoT22I	ATGCAT	1 cut(s)	1808
ErhI	CCWWGG	9 cut(s)	276, 636, 1206, 1663, 1682, 2139, 2247, 2643, 2926
Esp3I	CGTCTC	2 cut(s)	129, 260
FalI	AAGNNNNNCTT	4 cut(s)	1281, 1313, 2024, 2056
FaqI	GGGAC	4 cut(s)	545, 1138, 2318, 2661
FauNDI	CATATG	2 cut(s)	2413, 2944
FbaI	TGATCA	2 cut(s)	661, 2320
Fnu4HI	GCNGC	9 cut(s)	48, 1412, 1584, 1845, 1872, 1875, 2364, 2556, 2640
FokI	GGATG	8 cut(s)	26, 276, 954, 1391, 1902, 2291, 2330, 2717
Fsp4HI	GCNGC	9 cut(s)	48, 1412, 1584, 1845, 1872, 1875, 2364, 2556, 2640
FspBI	CTAG	2 cut(s)	1157, 1364
GluI	GCNGC	9 cut(s)	48, 1412, 1584, 1845, 1872, 1875, 2364, 2556, 2640
GsaI	CCCAGC	3 cut(s)	566, 611, 1620
GsuI	CTGGAG	6 cut(s)	196, 225, 242, 1689, 2550, 2622
HaeIII	GGCC	7 cut(s)	870, 984, 1414, 2059, 2447, 2505, 2838
HapII	CCGG	5 cut(s)	644, 1032, 1345, 1887, 2751
HgaI	GACGC	4 cut(s)	270, 1609, 2561, 2768
Hin1I	GRCGYC	2 cut(s)	281, 2037
HincII	GTYRAC	5 cut(s)	574, 1321, 1987, 2392, 2479
HindII	GTYRAC	5 cut(s)	574, 1321, 1987, 2392, 2479
HpaI	GTTAAC	2 cut(s)	1987, 2479
HpaII	CCGG	5 cut(s)	644, 1032, 1345, 1887, 2751
Hpy99I	CGWCG	2 cut(s)	124, 174
HpyAV	CCTTC	5 cut(s)	277, 881, 1429, 1645, 2269
HpyCH4IV	ACGT	3 cut(s)	2037, 2123, 2629
HpySE526I	ACGT	3 cut(s)	2037, 2123, 2629
Hsp92I	GRCGYC	2 cut(s)	281, 2037
KflI	GGGWCCC	1 cut(s)	2648
KpnI	GGTACC	1 cut(s)	153
Ksp22I	TGATCA	2 cut(s)	661, 2320
KspAI	GTTAAC	2 cut(s)	1987, 2479
LguI	GCTCTTC	1 cut(s)	67
LmnI	GCTCC	7 cut(s)	177, 718, 1708, 1841, 2005, 2380, 2603
Lsp1109I	GCAGC	7 cut(s)	34, 1570, 1831, 1861, 2350, 2542, 2626
LweI	GCATC	6 cut(s)	298, 583, 829, 1815, 1952, 2269
MaeI	CTAG	2 cut(s)	1157, 1364
MaeII	ACGT	3 cut(s)	2037, 2123, 2629
MfeI	CAATTG	1 cut(s)	1173
MflI	RGATCY	5 cut(s)	140, 303, 649, 2197, 2251
MhlI	GDGCHC	1 cut(s)	1799
MlsI	TGGCCA	4 cut(s)	984, 2059, 2447, 2838
MluNI	TGGCCA	4 cut(s)	984, 2059, 2447, 2838
MlyI	GAGTC	3 cut(s)	567, 1075, 2138
MmeI	TCCRAC	4 cut(s)	645, 874, 997, 1090
Mox20I	TGGCCA	4 cut(s)	984, 2059, 2447, 2838
Mph1103I	ATGCAT	1 cut(s)	1808
MroXI	GAANNNNTTC	2 cut(s)	616, 901
MscI	TGGCCA	4 cut(s)	984, 2059, 2447, 2838
MslI	CAYNNNNRTG	5 cut(s)	995, 1422, 1569, 2246, 2903
Msp20I	TGGCCA	4 cut(s)	984, 2059, 2447, 2838
MspA1I	CMGCKG	2 cut(s)	566, 2336
MspCI	CTTAAG	1 cut(s)	2044
MspI	CCGG	5 cut(s)	644, 1032, 1345, 1887, 2751
MspR9I	CCNGG	7 cut(s)	327, 804, 1008, 1346, 1707, 2259, 2835
MunI	CAATTG	1 cut(s)	1173
Mva1269I	GAATGC	2 cut(s)	703, 1456
MvaI	CCWGG	6 cut(s)	327, 804, 1008, 1707, 2259, 2835
NciI	CCSGG	1 cut(s)	1346
NcoI	CCATGG	4 cut(s)	276, 1206, 2247, 2926
NdeI	CATATG	2 cut(s)	2413, 2944
NlaIV	GGNNCC	8 cut(s)	151, 179, 642, 2007, 2199, 2253, 2649, 2650
NmuCI	GTSAC	4 cut(s)	1078, 1658, 2783, 2851
NsiI	ATGCAT	1 cut(s)	1808
NspI	RCATGY	3 cut(s)	790, 1806, 2113
OliI	CACNNNNGTG	1 cut(s)	2903
PagI	TCATGA	1 cut(s)	2487
PceI	AGGCCT	1 cut(s)	870
PciI	ACATGT	1 cut(s)	2109
PciSI	GCTCTTC	1 cut(s)	67
PctI	GAATGC	2 cut(s)	703, 1456
PdmI	GAANNNNTTC	2 cut(s)	616, 901
Pfl23II	CGTACG	1 cut(s)	2124
PkrI	GCNGC	9 cut(s)	49, 1413, 1585, 1846, 1873, 1876, 2365, 2557, 2641
Ple19I	CGATCG	1 cut(s)	86
PleI	GAGTC	3 cut(s)	566, 1075, 2137
PmaCI	CACGTG	1 cut(s)	2630
PmlI	CACGTG	1 cut(s)	2630
PpsI	GAGTC	3 cut(s)	566, 1075, 2137
Ppu21I	YACGTR	1 cut(s)	2630
PpuMI	RGGWCCY	1 cut(s)	2648
PscI	ACATGT	1 cut(s)	2109
PshBI	ATTAAT	1 cut(s)	1827
Psp5II	RGGWCCY	1 cut(s)	2648
Psp6I	CCWGG	6 cut(s)	325, 802, 1006, 1705, 2257, 2833
PspCI	CACGTG	1 cut(s)	2630
PspEI	GGTNACC	1 cut(s)	2144
PspFI	CCCAGC	3 cut(s)	562, 607, 1616
PspGI	CCWGG	6 cut(s)	325, 802, 1006, 1705, 2257, 2833
PspLI	CGTACG	1 cut(s)	2124
PspN4I	GGNNCC	8 cut(s)	151, 179, 642, 2007, 2199, 2253, 2649, 2650
PspPI	GGNCC	4 cut(s)	1403, 2261, 2504, 2648
PspPPI	RGGWCCY	1 cut(s)	2648
PstNI	CAGNNNCTG	1 cut(s)	1061
PsuI	RGATCY	5 cut(s)	140, 303, 649, 2197, 2251
PvuI	CGATCG	1 cut(s)	86
PvuII	CAGCTG	2 cut(s)	566, 2336
RsaI	GTAC	5 cut(s)	151, 1600, 2126, 2455, 2567
RsaNI	GTAC	5 cut(s)	150, 1599, 2125, 2454, 2566
RseI	CAYNNNNRTG	5 cut(s)	995, 1422, 1569, 2246, 2903
SapI	GCTCTTC	1 cut(s)	67
SatI	GCNGC	9 cut(s)	48, 1412, 1584, 1845, 1872, 1875, 2364, 2556, 2640
Sau96I	GGNCC	4 cut(s)	1403, 2261, 2504, 2648
SchI	GAGTC	3 cut(s)	567, 1075, 2138
ScrFI	CCNGG	7 cut(s)	327, 804, 1008, 1346, 1707, 2259, 2835
SduI	GDGCHC	1 cut(s)	1799
SfaNI	GCATC	6 cut(s)	298, 583, 829, 1815, 1952, 2269
SfcI	CTRYAG	3 cut(s)	352, 1670, 2657
SinI	GGWCC	3 cut(s)	1403, 2261, 2648
SmiMI	CAYNNNNRTG	5 cut(s)	995, 1422, 1569, 2246, 2903
SmlI	CTYRAG	3 cut(s)	722, 2044, 2959
SmoI	CTYRAG	3 cut(s)	722, 2044, 2959
SseBI	AGGCCT	1 cut(s)	870
SsiI	CCGC	6 cut(s)	12, 24, 1411, 1871, 2672, 2890
SspI	AATATT	1 cut(s)	1780
SspMI	CTAG	2 cut(s)	1157, 1364
StuI	AGGCCT	1 cut(s)	870
StyD4I	CCNGG	7 cut(s)	325, 802, 1006, 1344, 1705, 2257, 2833
StyI	CCWWGG	9 cut(s)	276, 636, 1206, 1663, 1682, 2139, 2247, 2643, 2926
TaiI	ACGT	3 cut(s)	2040, 2126, 2632
TaqI	TCGA	4 cut(s)	194, 688, 1539, 2895
TatI	WGTACW	1 cut(s)	1598
TauI	GCSGC	2 cut(s)	1414, 1874
TscAI	CASTG	6 cut(s)	708, 1083, 1281, 1842, 2101, 2323
TseFI	GTSAC	4 cut(s)	1078, 1658, 2783, 2851
TseI	GCWGC	7 cut(s)	47, 1583, 1844, 1874, 2363, 2555, 2639
Tsp45I	GTSAC	4 cut(s)	1078, 1658, 2783, 2851
TspRI	CASTG	6 cut(s)	708, 1083, 1281, 1842, 2101, 2323
Vha464I	CTTAAG	1 cut(s)	2044
VneI	GTGCAC	1 cut(s)	1795
VpaK11BI	GGWCC	3 cut(s)	1403, 2261, 2648
VspI	ATTAAT	1 cut(s)	1827
XapI	RAATTY	3 cut(s)	338, 1528, 1813
XbaI	TCTAGA	1 cut(s)	1363
XceI	RCATGY	3 cut(s)	790, 1806, 2113
XmnI	GAANNNNTTC	2 cut(s)	616, 901
XspI	CTAG	2 cut(s)	1157, 1364
ZraI	GACGTC	1 cut(s)	2038
Zsp2I	ATGCAT	1 cut(s)	1808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.