Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004800.1

Orthogroup ID

OG0009004

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 6341

Gene Structure 6341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004800.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2696 bp

ctcctgagagtcatccattcaaggagcatttgacagctcttcccaagccaggaggcggcgagtatgggaagttctatagccttacttcactgaaagatccgaggatcgataagttaccgtactctatcagaatcctccttgaatctgctattcgtaattgtgacaacttccaagtaaagaaggaagatgttgagaaaattcttgactgggaaaatactgctccaaagcaagttgaaattcctttcaagcctgctcgtgtactcttgcaggactttacaggagtgccagctgtggttgaccttgctgtaatgcgtgatgctatgaacaatcttggcagtgattctaacaagatcaatcccttggttcctgttgatcttgttgttgatcactccgttcaagtcgatgttgcaagatcagaaaatgcagtgcaggcaaatatggagctagaattccagagaaaccgggagagatttgcttttcttaaatggggttcgactgctttccaaaatatgcttgttgttccacctggttctggcattgttcatcaggtcaatcttgaatatcttggacgggttgttttcaacactaatggcttgctgtaccccgacagtgtggttggaactgattcccatacaaccatgattgatggtttgggagtagctggctggggagttgggggtattgaagcagaagctactatgcttggtcagcccatgagcatggtgttgcctggagttgttgggttcaagttatctggaaagttgaacaatggtgttactgctactgacttggtcttgactgtcacacaaatgttgaggaagcatggagttgtgggaaaatttgttgagttttatgggggtggtatgggtgaactgtcgttagccgacagggctactattgccaatatgtctcctgaatatggtgcaaccatggggttcttcccagtagatcatgttactttacaatatctcaaattgactggtagaagcgatgaaactgtggcaatgattgaaggttatcttcgggcaaataaattgtttgttgactataatgagcctgactcagaaagagtttactcatcttacctggaattggacctttcacaagttgagccctgtatttcaggaccaaagagacctcatgatcgtgtgaccttgaaagatatgaaagctgactggcatgcctgtcttgataacaaggtcgggttcaagggatttgctataccaaaagaggtacaagacaaagaggtgaagttttcattccatgggcagccagcagagcttaagcatggtagtgttgtcattgctgcaatcacaagctgcaccaatacatcaaacccaagtgtcatgcttggggctgcgcttgttgcaaaaaaggcctgtgaacttggtctacgggtcaagccatgggtaaaaacaagtcttgccccgggttctggagttgttacaaaatatctgctccagagtgggttgcaaaagtatctaaatgaacagggtttcaatattgttggatatggatgcacgacatgcattggaaattcaggggatttagatgaaagtgttgcttctgtcatagccgacaatgacatagtagcagctgctgtgctttctggaaacaggaactttgagggccgtgtacatgcattgacaagggctaattaccttgcctcacctcctttagtggttgcttatgccctggctggcacggttgacattgatttcgataaggagccaattggaacaggcaaggatggtaagagtgtctattttagggatatctggccatcttcagaagagattgcacaggttgtgcaatccagcgtgttgccagaaatgttcagaagcacttatgagtctattactaaaggcaaccccatatggaatcagctgtcggttccagaaaccaaactgtactcttgggaccctaactcaacctatattcatgagcccccatacttcaagggcatgaccatggatcctcctggtgctcatggtgtgaaggatgcctactgcctgttaaactttggtgacagtattacaacagatcacatctccccagctggaagcatccacaaggatagtcctgctgcaaaataccttcttgaacgtggagtggatcgcaaggacttcaattcctatggaagtcgtcgtggcaatgatgaagtgatggcaagaggaacttttgccaatattcgccttgtcaacaagctattgaatggagaagtgggtcctaaaacagttcacattccttctggagagaaactctctgtgttcgatgctgcaacgaaatacaagtctgctgggcaggacaccattgttttggctggtgctgagtatggaagtggaagctccagggattgggctgccaagggcccaatgttgttgggtgttaaagcagtgattgctaaaagttttgagaggatccatcgcagtaatttggtgggtatgggtattattccactttgtttcaaagctggtgaggatgcagatacactaggattgactggtcatgaacgttataccattgacctccctagcaatattagtgagataaagcctggccaagatgtgactgtcaccacggacagtggaaagtcttttgaatgcactgtgcgcttcgacactgaggtggaattggcttacttcaaccatggaggtattcttccatatgtgataaggaacctgagcaagcagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0003994 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0006082 GO:0006101 GO:0006102 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017076 GO:0017144 GO:0019752 GO:0030312 GO:0030554 GO:0031090 GO:0031667 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0035639 GO:0036094 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048856 GO:0050896 GO:0071704 GO:0071944 GO:0072350 GO:0090351 GO:0097159 GO:0097305 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700 GO:1990641

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map00720 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Aconitase Aconitase_C

Protein Analysis

897

Amino Acids

97.72

Weight (kDa)

5.86

Isoelectric Point (pI)

31.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05710
fragaria_vesca	FvH4_6g43190
malus_domestica	MD09G1108800.v1.1 MD17G1096700.v1.1
prunus_persica	Prupe.3G217300_v2.0.a1 Prupe.3G217300_v2.0.a1
pyrus_communis	pycom09g03120 pycom17g09260
rosa_chinensis	RchiOBHm_Chr2g0159291
rosa_laevigata	RLG00000021152
rosa_multiflora	Rmu_sc0004800.1_g000001 Rmu_sc0007806.1_g000010 Rmu_sc0010590.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090620
rosa_rugosa	Rorug02G0475700
rosa_samantha	Rh2AG542100 Rh2BG554700 Rh2CG524800 Rh2DG564400 Rh5AG522200
rosa_wichuraiana	Rw2G044840 Rw5G048460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2357
AccI	GTMKAC	1 cut(s)	1392
AciI	CCGC	1 cut(s)	56
AclI	AACGTT	1 cut(s)	2514
AclWI	GGATC	7 cut(s)	91, 112, 1969, 1982, 2123, 2415, 2428
AcoI	YGGCCR	2 cut(s)	1780, 2559
AcsI	RAATTY	5 cut(s)	197, 236, 448, 838, 1536
AcuI	CTGAAG	1 cut(s)	1772
AfaI	GTAC	6 cut(s)	121, 260, 601, 1235, 1637, 1912
AfiI	CCNNNNNNNGG	7 cut(s)	49, 55, 532, 919, 1092, 1435, 2357
AflII	CTTAAG	1 cut(s)	1282
AjnI	CCWGG	8 cut(s)	48, 525, 729, 1085, 1694, 1980, 2350, 2556
AleI	CACNNNNGTG	1 cut(s)	2626
Alw21I	GWGCWC	1 cut(s)	1989
Alw26I	GTCTC	2 cut(s)	914, 1128
AlwI	GGATC	7 cut(s)	91, 112, 1969, 1982, 2123, 2415, 2428
AlwNI	CAGNNNCTG	1 cut(s)	1600
Ama87I	CYCGRG	1 cut(s)	1428
AoxI	GGCC	5 cut(s)	1376, 1629, 1780, 2370, 2559
ApaI	GGGCCC	1 cut(s)	2374
ApeKI	GCWGC	9 cut(s)	1269, 1306, 1319, 1357, 1594, 1597, 2086, 2278, 2362
ApoI	RAATTY	5 cut(s)	197, 236, 448, 838, 1536
ArsI	GACNNNNNNTTYG	4 cut(s)	1702, 1734, 2278, 2310
Asp700I	GAANNNNTTC	1 cut(s)	624
AspLEI	GCGC	2 cut(s)	1362, 2615
AspS9I	GGNCC	7 cut(s)	1095, 1126, 1629, 1920, 2227, 2370, 2371
AsuC2I	CCSGG	3 cut(s)	463, 1429, 1430
AsuHPI	GGTGA	6 cut(s)	880, 1260, 1661, 2038, 2488, 2568
AvaI	CYCGRG	1 cut(s)	1428
AvaII	GGWCC	4 cut(s)	1095, 1126, 1920, 2227
BaeGI	GKGCMC	1 cut(s)	2374
BalI	TGGCCA	2 cut(s)	1782, 2561
BamHI	GGATCC	2 cut(s)	1974, 2420
BanII	GRGCYC	3 cut(s)	1115, 1949, 2374
BarI	GAAGNNNNNNTAC	2 cut(s)	1990, 2022
BauI	CACGAG	1 cut(s)	254
Bbv12I	GWGCWC	1 cut(s)	1989
BbvI	GCAGC	9 cut(s)	1281, 1293, 1306, 1344, 1584, 1606, 2073, 2265, 2349
BccI	CCATC	5 cut(s)	640, 1744, 1791, 2160, 2432
BceAI	ACGGC	1 cut(s)	1616
BciT130I	CCWGG	8 cut(s)	50, 527, 731, 1087, 1696, 1982, 2352, 2558
BclI	TGATCA	1 cut(s)	384
BcnI	CCSGG	3 cut(s)	463, 1429, 1430
BcoDI	GTCTC	2 cut(s)	914, 1128
BfaI	CTAG	3 cut(s)	445, 2494, 2534
BfmI	CTRYAG	1 cut(s)	75
BfrI	CTTAAG	1 cut(s)	1282
BglI	GCCNNNNNGGC	1 cut(s)	889
Bme18I	GGWCC	4 cut(s)	1095, 1126, 1920, 2227
BmeT110I	CYCGRG	1 cut(s)	1428
BmgT120I	GGNCC	7 cut(s)	1095, 1126, 1629, 1920, 2227, 2370, 2371
BmrI	ACTGGG	2 cut(s)	216, 937
BmsI	GCATC	6 cut(s)	306, 1507, 1992, 2075, 2265, 2472
BmuI	ACTGGG	2 cut(s)	216, 937
BplI	GAGNNNNNCTC	6 cut(s)	1045, 1077, 2246, 2278, 2248, 2280
BpmI	CTGGAG	5 cut(s)	752, 1444, 1457, 2273, 2334
Bpu10I	CCTNAGC	1 cut(s)	2683
BpuMI	CCSGG	3 cut(s)	463, 1429, 1430
Bsa29I	ATCGAT	1 cut(s)	107
BsaI	GGTCTC	1 cut(s)	1128
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 55, 532, 919, 1092, 1435, 2357
Bse1I	ACTGG	5 cut(s)	211, 943, 984, 1180, 2508
Bse3DI	GCAATG	3 cut(s)	1010, 1301, 2160
BseBI	CCWGG	8 cut(s)	50, 527, 731, 1087, 1696, 1982, 2352, 2558
BseCI	ATCGAT	1 cut(s)	107
BseGI	GGATG	6 cut(s)	12, 1522, 1755, 2007, 2066, 2487
BseLI	CCNNNNNNNGG	7 cut(s)	49, 55, 532, 919, 1092, 1435, 2357
BseMI	GCAATG	3 cut(s)	1010, 1301, 2160
BseMII	CTCAG	4 cut(s)	1076, 2321, 2615, 2674
BseNI	ACTGG	5 cut(s)	211, 943, 984, 1180, 2508
BseSI	GKGCMC	1 cut(s)	2374
BseXI	GCAGC	9 cut(s)	1281, 1293, 1306, 1344, 1584, 1606, 2073, 2265, 2349
BseYI	CCCAGC	3 cut(s)	665, 2055, 2299
BsgI	GTGCAG	2 cut(s)	448, 1305
BshFI	GGCC	5 cut(s)	1378, 1631, 1782, 2372, 2561
BshVI	ATCGAT	1 cut(s)	107
BsiHKAI	GWGCWC	1 cut(s)	1989
BsiHKCI	CYCGRG	1 cut(s)	1428
BsiSI	CCGG	2 cut(s)	462, 1429
BslFI	GGGAC	1 cut(s)	1933
BslI	CCNNNNNNNGG	7 cut(s)	49, 55, 532, 919, 1092, 1435, 2357
BsmAI	GTCTC	2 cut(s)	914, 1128
BsmFI	GGGAC	1 cut(s)	1933
BsmI	GAATGC	1 cut(s)	2608
BsnI	GGCC	5 cut(s)	1378, 1631, 1782, 2372, 2561
Bso31I	GGTCTC	1 cut(s)	1128
BsoBI	CYCGRG	1 cut(s)	1428
Bsp120I	GGGCCC	1 cut(s)	2370
Bsp1286I	GDGCHC	4 cut(s)	1115, 1949, 1989, 2374
Bsp1407I	TGTACA	1 cut(s)	1635
Bsp19I	CCATGG	5 cut(s)	929, 1263, 1405, 1970, 2649
BspACI	CCGC	1 cut(s)	56
BspANI	GGCC	5 cut(s)	1378, 1631, 1782, 2372, 2561
BspCNI	CTCAG	4 cut(s)	1075, 2322, 2616, 2675
BspDI	ATCGAT	1 cut(s)	107
BspHI	TCATGA	3 cut(s)	1140, 1941, 2508
BspPI	GGATC	7 cut(s)	91, 112, 1969, 1982, 2123, 2415, 2428
BspQI	GCTCTTC	1 cut(s)	44
BspTI	CTTAAG	1 cut(s)	1282
BspTNI	GGTCTC	1 cut(s)	1128
BsrDI	GCAATG	3 cut(s)	1010, 1301, 2160
BsrGI	TGTACA	1 cut(s)	1635
BsrI	ACTGG	5 cut(s)	211, 943, 984, 1180, 2508
BssSI	CACGAG	1 cut(s)	254
BssT1I	CCWWGG	7 cut(s)	359, 929, 1263, 1405, 1970, 2366, 2649
Bst2BI	CACGAG	1 cut(s)	254
Bst2UI	CCWGG	8 cut(s)	50, 527, 731, 1087, 1696, 1982, 2352, 2558
Bst6I	CTCTTC	2 cut(s)	44, 1787
BstAFI	CTTAAG	1 cut(s)	1282
BstAPI	GCANNNNNTGC	2 cut(s)	1526, 2401
BstAUI	TGTACA	1 cut(s)	1635
BstC8I	GCNNGC	9 cut(s)	251, 287, 431, 595, 663, 1181, 1274, 1701, 2689
BstDEI	CTNAG	5 cut(s)	5, 1062, 2330, 2624, 2683
BstDSI	CCRYGG	6 cut(s)	929, 1263, 1405, 1970, 2579, 2649
BstF5I	GGATG	6 cut(s)	12, 1522, 1755, 2007, 2066, 2487
BstHHI	GCGC	2 cut(s)	1362, 2615
BstMAI	GTCTC	2 cut(s)	914, 1128
BstNI	CCWGG	8 cut(s)	50, 527, 731, 1087, 1696, 1982, 2352, 2558
BstNSI	RCATGY	3 cut(s)	1183, 1529, 1642
BstSFI	CTRYAG	1 cut(s)	75
BstSLI	GKGCMC	1 cut(s)	2374
BstV1I	GCAGC	9 cut(s)	1281, 1293, 1306, 1344, 1584, 1606, 2073, 2265, 2349
BstX2I	RGATCY	3 cut(s)	96, 1974, 2420
BstXI	CCANNNNNNTGG	2 cut(s)	720, 2319
BstYI	RGATCY	3 cut(s)	96, 1974, 2420
Bsu15I	ATCGAT	1 cut(s)	107
BsuRI	GGCC	5 cut(s)	1378, 1631, 1782, 2372, 2561
BsuTUI	ATCGAT	1 cut(s)	107
BtgI	CCRYGG	6 cut(s)	929, 1263, 1405, 1970, 2579, 2649
BtgZI	GCGATG	2 cut(s)	1004, 2410
BtsCI	GGATG	6 cut(s)	12, 1522, 1755, 2007, 2066, 2487
BtsI	GCAGTG	3 cut(s)	342, 431, 2402
BtsIMutI	CAGTG	8 cut(s)	88, 342, 431, 615, 2402, 2592, 2606, 2621
Cac8I	GCNNGC	9 cut(s)	251, 287, 431, 595, 663, 1181, 1274, 1701, 2689
CaiI	CAGNNNCTG	1 cut(s)	1600
CciI	TCATGA	3 cut(s)	1140, 1941, 2508
CfoI	GCGC	2 cut(s)	1362, 2615
Cfr13I	GGNCC	7 cut(s)	1095, 1126, 1629, 1920, 2227, 2370, 2371
Cfr9I	CCCGGG	1 cut(s)	1428
ClaI	ATCGAT	1 cut(s)	107
CsiI	ACCWGGT	1 cut(s)	525
Csp6I	GTAC	6 cut(s)	120, 259, 600, 1234, 1636, 1911
CviQI	GTAC	6 cut(s)	120, 259, 600, 1234, 1636, 1911
DdeI	CTNAG	5 cut(s)	5, 1062, 2330, 2624, 2683
EaeI	YGGCCR	2 cut(s)	1780, 2559
Eam1104I	CTCTTC	2 cut(s)	44, 1787
EarI	CTCTTC	2 cut(s)	44, 1787
Eco130I	CCWWGG	7 cut(s)	359, 929, 1263, 1405, 1970, 2366, 2649
Eco147I	AGGCCT	1 cut(s)	1378
Eco24I	GRGCYC	3 cut(s)	1115, 1949, 2374
Eco31I	GGTCTC	1 cut(s)	1128
Eco32I	GATATC	1 cut(s)	1776
Eco47I	GGWCC	4 cut(s)	1095, 1126, 1920, 2227
Eco57I	CTGAAG	1 cut(s)	1772
Eco88I	CYCGRG	1 cut(s)	1428
EcoO109I	RGGNCCY	3 cut(s)	1920, 2227, 2370
EcoRI	GAATTC	1 cut(s)	448
EcoRII	CCWGG	8 cut(s)	48, 525, 729, 1085, 1694, 1980, 2350, 2556
EcoRV	GATATC	1 cut(s)	1776
EcoT14I	CCWWGG	7 cut(s)	359, 929, 1263, 1405, 1970, 2366, 2649
EcoT22I	ATGCAT	2 cut(s)	1531, 1644
EcoT38I	GRGCYC	3 cut(s)	1115, 1949, 2374
ErhI	CCWWGG	7 cut(s)	359, 929, 1263, 1405, 1970, 2366, 2649
FalI	AAGNNNNNCTT	6 cut(s)	1004, 1036, 1548, 1580, 2163, 2195
FaqI	GGGAC	1 cut(s)	1933
FauNDI	CATATG	2 cut(s)	1876, 2667
FbaI	TGATCA	1 cut(s)	384
FblI	GTMKAC	1 cut(s)	1392
FokI	GGATG	5 cut(s)	1529, 1762, 2014, 2053, 2494
FriOI	GRGCYC	3 cut(s)	1115, 1949, 2374
FspBI	CTAG	3 cut(s)	445, 2494, 2534
GlaI	GCGC	2 cut(s)	1361, 2614
GsaI	CCCAGC	3 cut(s)	669, 2059, 2303
GsuI	CTGGAG	5 cut(s)	752, 1444, 1457, 2273, 2334
HaeIII	GGCC	5 cut(s)	1378, 1631, 1782, 2372, 2561
HapII	CCGG	2 cut(s)	462, 1429
HhaI	GCGC	2 cut(s)	1362, 2615
Hin6I	GCGC	2 cut(s)	1360, 2613
HinP1I	GCGC	2 cut(s)	1360, 2613
HincII	GTYRAC	4 cut(s)	297, 1044, 1710, 2202
HindII	GTYRAC	4 cut(s)	297, 1044, 1710, 2202
HinfI	GANTC	8 cut(s)	9, 131, 142, 340, 625, 1060, 1852, 1881
HpaII	CCGG	2 cut(s)	462, 1429
HphI	GGTGA	6 cut(s)	880, 1260, 1661, 2038, 2488, 2568
Hpy188I	TCNGA	6 cut(s)	101, 130, 417, 1065, 1791, 1840
Hpy99I	CGWCG	1 cut(s)	2150
HpyAV	CCTTC	5 cut(s)	174, 1006, 1992, 2107, 2258
HpyCH4IV	ACGT	2 cut(s)	2106, 2514
HpyF3I	CTNAG	5 cut(s)	5, 1062, 2330, 2624, 2683
HpySE526I	ACGT	2 cut(s)	2106, 2514
HspAI	GCGC	2 cut(s)	1360, 2613
KflI	GGGWCCC	1 cut(s)	1920
Ksp22I	TGATCA	1 cut(s)	384
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	6 cut(s)	24, 225, 441, 1463, 1728, 2353
Lsp1109I	GCAGC	9 cut(s)	1281, 1293, 1306, 1344, 1584, 1606, 2073, 2265, 2349
LweI	GCATC	6 cut(s)	306, 1507, 1992, 2075, 2265, 2472
MabI	ACCWGGT	1 cut(s)	525
MaeI	CTAG	3 cut(s)	445, 2494, 2534
MaeII	ACGT	2 cut(s)	2106, 2514
MboII	GAAGA	7 cut(s)	31, 196, 930, 1012, 1778, 1804, 2653
MfeI	CAATTG	1 cut(s)	1733
MflI	RGATCY	3 cut(s)	96, 1974, 2420
MhlI	GDGCHC	4 cut(s)	1115, 1949, 1989, 2374
MlsI	TGGCCA	2 cut(s)	1782, 2561
MluNI	TGGCCA	2 cut(s)	1782, 2561
MlyI	GAGTC	3 cut(s)	18, 1054, 1861
MmeI	TCCRAC	2 cut(s)	597, 1488
Mox20I	TGGCCA	2 cut(s)	1782, 2561
Mph1103I	ATGCAT	2 cut(s)	1531, 1644
MroXI	GAANNNNTTC	1 cut(s)	624
MscI	TGGCCA	2 cut(s)	1782, 2561
MseI	TTAA	4 cut(s)	482, 1283, 2017, 2390
MslI	CAYNNNNRTG	6 cut(s)	718, 808, 1145, 1292, 1969, 2626
Msp20I	TGGCCA	2 cut(s)	1782, 2561
MspA1I	CMGCKG	4 cut(s)	289, 1597, 1887, 2059
MspCI	CTTAAG	1 cut(s)	1282
MspI	CCGG	2 cut(s)	462, 1429
MunI	CAATTG	1 cut(s)	1733
Mva1269I	GAATGC	1 cut(s)	2608
MvaI	CCWGG	8 cut(s)	50, 527, 731, 1087, 1696, 1982, 2352, 2558
NciI	CCSGG	3 cut(s)	463, 1429, 1430
NcoI	CCATGG	5 cut(s)	929, 1263, 1405, 1970, 2649
NdeI	CATATG	2 cut(s)	1876, 2667
NmuCI	GTSAC	6 cut(s)	160, 801, 1149, 2026, 2568, 2574
NsiI	ATGCAT	2 cut(s)	1531, 1644
NspI	RCATGY	3 cut(s)	1183, 1529, 1642
OliI	CACNNNNGTG	1 cut(s)	2626
PaeI	GCATGC	1 cut(s)	1183
PagI	TCATGA	3 cut(s)	1140, 1941, 2508
PceI	AGGCCT	1 cut(s)	1378
PciSI	GCTCTTC	1 cut(s)	44
PctI	GAATGC	1 cut(s)	2608
PdmI	GAANNNNTTC	1 cut(s)	624
PfeI	GAWTC	5 cut(s)	131, 142, 340, 625, 1881
PflFI	GACNNNGTC	1 cut(s)	790
PflMI	CCANNNNNTGG	1 cut(s)	2357
PleI	GAGTC	3 cut(s)	17, 1054, 1860
PpsI	GAGTC	3 cut(s)	17, 1054, 1860
PpuMI	RGGWCCY	2 cut(s)	1920, 2227
Psp1406I	AACGTT	1 cut(s)	2514
Psp5II	RGGWCCY	2 cut(s)	1920, 2227
Psp6I	CCWGG	8 cut(s)	48, 525, 729, 1085, 1694, 1980, 2350, 2556
PspFI	CCCAGC	3 cut(s)	665, 2055, 2299
PspGI	CCWGG	8 cut(s)	48, 525, 729, 1085, 1694, 1980, 2350, 2556
PspOMI	GGGCCC	1 cut(s)	2370
PspPI	GGNCC	7 cut(s)	1095, 1126, 1629, 1920, 2227, 2370, 2371
PspPPI	RGGWCCY	2 cut(s)	1920, 2227
PsrI	GAACNNNNNNTAC	4 cut(s)	55, 87, 1376, 1408
PstNI	CAGNNNCTG	1 cut(s)	1600
PsuI	RGATCY	3 cut(s)	96, 1974, 2420
PsyI	GACNNNGTC	1 cut(s)	790
PvuII	CAGCTG	4 cut(s)	289, 1597, 1887, 2059
RsaI	GTAC	6 cut(s)	121, 260, 601, 1235, 1637, 1912
RsaNI	GTAC	6 cut(s)	120, 259, 600, 1234, 1636, 1911
RseI	CAYNNNNRTG	6 cut(s)	718, 808, 1145, 1292, 1969, 2626
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	4 cut(s)	482, 1283, 2017, 2390
Sau96I	GGNCC	7 cut(s)	1095, 1126, 1629, 1920, 2227, 2370, 2371
SchI	GAGTC	3 cut(s)	18, 1054, 1861
SduI	GDGCHC	4 cut(s)	1115, 1949, 1989, 2374
SexAI	ACCWGGT	1 cut(s)	525
SfaNI	GCATC	6 cut(s)	306, 1507, 1992, 2075, 2265, 2472
SfcI	CTRYAG	1 cut(s)	75
SinI	GGWCC	4 cut(s)	1095, 1126, 1920, 2227
SmaI	CCCGGG	1 cut(s)	1430
SmiMI	CAYNNNNRTG	6 cut(s)	718, 808, 1145, 1292, 1969, 2626
SmlI	CTYRAG	1 cut(s)	1282
SmoI	CTYRAG	1 cut(s)	1282
SphI	GCATGC	1 cut(s)	1183
SseBI	AGGCCT	1 cut(s)	1378
SsiI	CCGC	1 cut(s)	56
SspI	AATATT	3 cut(s)	1503, 2190, 2541
SspMI	CTAG	3 cut(s)	445, 2494, 2534
StuI	AGGCCT	1 cut(s)	1378
StyI	CCWWGG	7 cut(s)	359, 929, 1263, 1405, 1970, 2366, 2649
TaiI	ACGT	2 cut(s)	2109, 2517
TaqI	TCGA	6 cut(s)	107, 401, 493, 1721, 2273, 2618
TatI	WGTACW	3 cut(s)	258, 1635, 1910
TauI	GCSGC	1 cut(s)	59
TfiI	GAWTC	5 cut(s)	131, 142, 340, 625, 1881
Tru1I	TTAA	4 cut(s)	482, 1283, 2017, 2390
Tru9I	TTAA	4 cut(s)	482, 1283, 2017, 2390
TscAI	CASTG	8 cut(s)	95, 342, 431, 615, 2402, 2592, 2613, 2628
TseFI	GTSAC	6 cut(s)	160, 801, 1149, 2026, 2568, 2574
TseI	GCWGC	9 cut(s)	1269, 1306, 1319, 1357, 1594, 1597, 2086, 2278, 2362
Tsp45I	GTSAC	6 cut(s)	160, 801, 1149, 2026, 2568, 2574
TspGWI	ACGGA	2 cut(s)	381, 2596
TspMI	CCCGGG	1 cut(s)	1428
TspRI	CASTG	8 cut(s)	95, 342, 431, 615, 2402, 2592, 2613, 2628
Tth111I	GACNNNGTC	1 cut(s)	790
Van91I	CCANNNNNTGG	1 cut(s)	2357
Vha464I	CTTAAG	1 cut(s)	1282
VpaK11BI	GGWCC	4 cut(s)	1095, 1126, 1920, 2227
XapI	RAATTY	5 cut(s)	197, 236, 448, 838, 1536
XceI	RCATGY	3 cut(s)	1183, 1529, 1642
XmaI	CCCGGG	1 cut(s)	1428
XmiI	GTMKAC	1 cut(s)	1392
XmnI	GAANNNNTTC	1 cut(s)	624
XspI	CTAG	3 cut(s)	445, 2494, 2534
Zsp2I	ATGCAT	2 cut(s)	1531, 1644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.