AT2G14660

EVE domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012175
Physical Location & Seq
Forward (+)
6272469 .. 6273227
759 bp
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UTR
Exon/CDS
Intron
AT2G14660.1

Sequence Viewer

Length: 477 bp
ATGGGGAAAACGAAGCGATACTGGTTACTGAAAACAGAGCCAAATGAGTGGTCATGGTCAGACCAAGAATCAAACGGCGGTATCAGCAAATGGGACGGCGTCAAGAACAAACAAGCCCAGAAGAATCTTAAATCCATGACTTTAGGAGATCTCTGTTTCTTCTACCATTCAGGAACCAAATCAAGATGCGTCGTTGGCGTGGTTGAAGTATCACGTGAATGGTACACTGATGATGCTGAAGGAGTAGAAGGAGAAGGAGCGGTTGATGTCAAAGCGATTGGAGAAATGAGGAAATGTGTGGATTTGAAGGAAATGAAAGGAGACAAAGGGATTATTACTAAAGGTTTTGTTTTGTTTAGACAGCCGAGGTTGTCTGTTGTTCCTGTTGAGGAAGATGTTTGGAATATGATTTGTGAATTGGGAAATGGGTTTTGTGGAGATGGTAAGGAAGATTGTGAAAGTAGTGATGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EVE

Protein Analysis

158

Amino Acids

17.76

Weight (kDa)

4.91

Isoelectric Point (pI)

20.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EVE PF01878 6 - 140 1.5e-36 EVE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 260
AciI CCGC 2 cut(s) 78, 260
AcuI CTGAAG 1 cut(s) 258
AcvI CACGTG 1 cut(s) 215
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 1 cut(s) 224
AgsI TTSAA 2 cut(s) 206, 307
Alw26I GTCTC 1 cut(s) 315
ArsI GACNNNNNNTTYG 2 cut(s) 35, 67
BaeI ACNNNNGTAYC 2 cut(s) 64, 97
BbrPI CACGTG 1 cut(s) 215
BccI CCATC 1 cut(s) 434
BceAI ACGGC 2 cut(s) 91, 112
BcoDI GTCTC 1 cut(s) 315
BglII AGATCT 1 cut(s) 148
BmiI GGNNCC 1 cut(s) 175
BmsI GCATC 2 cut(s) 176, 223
BsaAI YACGTR 1 cut(s) 215
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 365
Bse1I ACTGG 1 cut(s) 26
BseDI CCNNGG 1 cut(s) 365
BseNI ACTGG 1 cut(s) 26
BslFI GGGAC 1 cut(s) 107
BsmAI GTCTC 1 cut(s) 315
BsmFI GGGAC 1 cut(s) 107
Bsp143I GATC 1 cut(s) 148
BspACI CCGC 2 cut(s) 78, 260
BspLI GGNNCC 1 cut(s) 175
BsrBI CCGCTC 1 cut(s) 260
BsrI ACTGG 1 cut(s) 26
BssECI CCNNGG 1 cut(s) 365
BssMI GATC 1 cut(s) 148
BssNI GRCGYC 1 cut(s) 99
BstACI GRCGYC 1 cut(s) 99
BstBAI YACGTR 1 cut(s) 215
BstKTI GATC 1 cut(s) 151
BstMAI GTCTC 1 cut(s) 315
BstMBI GATC 1 cut(s) 148
BstMWI GCNNNNNNNGC 2 cut(s) 84, 195
BstX2I RGATCY 1 cut(s) 148
BstXI CCANNNNNNTGG 1 cut(s) 48
BstYI RGATCY 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 225
CseI GACGC 2 cut(s) 88, 178
Csp6I GTAC 1 cut(s) 223
CviAII CATG 2 cut(s) 54, 136
CviJI RGCY 3 cut(s) 40, 116, 364
CviKI_1 RGCY 3 cut(s) 40, 116, 364
CviQI GTAC 1 cut(s) 223
DpnI GATC 1 cut(s) 150
DpnII GATC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 258
Eco72I CACGTG 1 cut(s) 215
FaeI CATG 2 cut(s) 57, 139
FaiI YATR 3 cut(s) 55, 137, 407
FaqI GGGAC 1 cut(s) 107
FatI CATG 2 cut(s) 53, 135
HgaI GACGC 2 cut(s) 88, 178
Hin1I GRCGYC 1 cut(s) 99
Hin1II CATG 2 cut(s) 57, 139
HinfI GANTC 2 cut(s) 68, 124
Hpy166II GTNNAC 1 cut(s) 225
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 3 cut(s) 103, 171, 183
Hpy8I GTNNAC 1 cut(s) 225
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 4 cut(s) 233, 242, 248, 301
HpyCH4IV ACGT 1 cut(s) 214
HpyF10VI GCNNNNNNNGC 2 cut(s) 84, 195
HpySE526I ACGT 1 cut(s) 214
Hsp92I GRCGYC 1 cut(s) 99
Hsp92II CATG 2 cut(s) 57, 139
Kzo9I GATC 1 cut(s) 148
LmnI GCTCC 1 cut(s) 257
LpnPI CCDG 4 cut(s) 7, 131, 156, 396
LweI GCATC 2 cut(s) 176, 223
MaeII ACGT 1 cut(s) 214
MaeIII GTNAC 1 cut(s) 24
MalI GATC 1 cut(s) 150
MbiI CCGCTC 1 cut(s) 260
MboI GATC 1 cut(s) 148
MboII GAAGA 4 cut(s) 133, 151, 404, 461
MflI RGATCY 1 cut(s) 148
MluCI AATT 1 cut(s) 416
MnlI CCTC 3 cut(s) 282, 360, 382
MseI TTAA 1 cut(s) 129
MslI CAYNNNNRTG 1 cut(s) 217
MwoI GCNNNNNNNGC 2 cut(s) 84, 195
NdeII GATC 1 cut(s) 148
NlaIII CATG 2 cut(s) 57, 139
NlaIV GGNNCC 1 cut(s) 175
NmeAIII GCCGAG 1 cut(s) 390
PfeI GAWTC 2 cut(s) 68, 124
PflFI GACNNNGTC 1 cut(s) 98
PmaCI CACGTG 1 cut(s) 215
PmlI CACGTG 1 cut(s) 215
Ppu21I YACGTR 1 cut(s) 215
PspCI CACGTG 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 175
PsuI RGATCY 1 cut(s) 148
PsyI GACNNNGTC 1 cut(s) 98
RsaI GTAC 1 cut(s) 224
RsaNI GTAC 1 cut(s) 223
RseI CAYNNNNRTG 1 cut(s) 217
SaqAI TTAA 1 cut(s) 129
Sau3AI GATC 1 cut(s) 148
SetI ASST 3 cut(s) 217, 346, 371
SfaNI GCATC 2 cut(s) 176, 223
SmiMI CAYNNNNRTG 1 cut(s) 217
Sse9I AATT 1 cut(s) 416
SsiI CCGC 2 cut(s) 78, 260
TaiI ACGT 1 cut(s) 217
TasI AATT 1 cut(s) 416
TfiI GAWTC 2 cut(s) 68, 124
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
TscAI CASTG 1 cut(s) 232
TspDTI ATGAA 1 cut(s) 329
TspRI CASTG 1 cut(s) 232
Tth111I GACNNNGTC 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.