pycom05g10240

EVE domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0012175
Physical Location & Seq
Reverse (-)
13611459 .. 13611668
210 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10240.1

Sequence Viewer

Length: 210 bp
ATGAAGCTCAGCGACTTCTGCTGCTTCTACCACTCAGGTGCCAAGGCCTGCCGCGTAATCCGCGTCTTCACCATCATGCGGGAATGGTATTTAGAAAAAGGGGATGATGGGGTGGTTGATGTGAAGGCGGTTGGGGAGATGAGGAGGCTGATGGACTTAAAGGAGATGAAGGGGGAGGAGGGGCTTAAGGGGTTTGCTTTGTTTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EVE

Protein Analysis

70

Amino Acids

8.01

Weight (kDa)

8.52

Isoelectric Point (pI)

15.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EVE PF01878 1 - 68 2.4e-06 EVE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 38
AccII CGCG 2 cut(s) 54, 63
AciI CCGC 4 cut(s) 52, 61, 79, 128
AfiI CCNNNNNNNGG 1 cut(s) 78
AflII CTTAAG 1 cut(s) 185
AleI CACNNNNGTG 1 cut(s) 36
AluBI AGCT 1 cut(s) 7
AluI AGCT 1 cut(s) 7
AoxI GGCC 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 21
AsuHPI GGTGA 1 cut(s) 61
BanI GGYRCC 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 58
BbvI GCAGC 1 cut(s) 8
BccI CCATC 3 cut(s) 80, 101, 145
BfrI CTTAAG 1 cut(s) 185
BisI GCNGC 2 cut(s) 22, 52
BlpI GCTNAGC 1 cut(s) 8
BlsI GCNGC 2 cut(s) 23, 53
BmiI GGNNCC 1 cut(s) 40
BpiI GAAGAC 1 cut(s) 58
Bpu1102I GCTNAGC 1 cut(s) 8
BsaJI CCNNGG 1 cut(s) 42
Bsc4I CCNNNNNNNGG 1 cut(s) 78
BseDI CCNNGG 1 cut(s) 42
BseGI GGATG 1 cut(s) 109
BseLI CCNNNNNNNGG 1 cut(s) 78
BseMII CTCAG 2 cut(s) 22, 48
BseRI GAGGAG 2 cut(s) 157, 191
BseXI GCAGC 1 cut(s) 8
Bsh1236I CGCG 2 cut(s) 54, 63
BshFI GGCC 1 cut(s) 47
BshNI GGYRCC 1 cut(s) 38
BslI CCNNNNNNNGG 1 cut(s) 78
BsnI GGCC 1 cut(s) 47
Bsp1720I GCTNAGC 1 cut(s) 8
BspACI CCGC 4 cut(s) 52, 61, 79, 128
BspANI GGCC 1 cut(s) 47
BspCNI CTCAG 2 cut(s) 21, 47
BspFNI CGCG 2 cut(s) 54, 63
BspLI GGNNCC 1 cut(s) 40
BspT107I GGYRCC 1 cut(s) 38
BspTI CTTAAG 1 cut(s) 185
BssECI CCNNGG 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 185
BstC8I GCNNGC 1 cut(s) 49
BstDEI CTNAG 2 cut(s) 8, 34
BstF5I GGATG 1 cut(s) 109
BstFNI CGCG 2 cut(s) 54, 63
BstMWI GCNNNNNNNGC 2 cut(s) 18, 60
BstUI CGCG 2 cut(s) 54, 63
BstV1I GCAGC 1 cut(s) 8
BstV2I GAAGAC 1 cut(s) 58
BsuRI GGCC 1 cut(s) 47
BtsCI GGATG 1 cut(s) 109
Cac8I GCNNGC 1 cut(s) 49
CseI GACGC 1 cut(s) 52
CviAII CATG 1 cut(s) 76
CviJI RGCY 4 cut(s) 7, 47, 148, 184
CviKI_1 RGCY 4 cut(s) 7, 47, 148, 184
DdeI CTNAG 2 cut(s) 8, 34
Eco130I CCWWGG 1 cut(s) 42
Eco147I AGGCCT 1 cut(s) 47
EcoT14I CCWWGG 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 42
FaeI CATG 1 cut(s) 79
FaiI YATR 1 cut(s) 77
FatI CATG 1 cut(s) 75
FauI CCCGC 1 cut(s) 72
Fnu4HI GCNGC 2 cut(s) 22, 52
FokI GGATG 1 cut(s) 116
Fsp4HI GCNGC 2 cut(s) 22, 52
GluI GCNGC 2 cut(s) 22, 52
HaeIII GGCC 1 cut(s) 47
HgaI GACGC 1 cut(s) 52
Hin1II CATG 1 cut(s) 79
HphI GGTGA 1 cut(s) 61
HpyAV CCTTC 2 cut(s) 118, 163
HpyF10VI GCNNNNNNNGC 2 cut(s) 18, 60
HpyF3I CTNAG 2 cut(s) 8, 34
Hsp92II CATG 1 cut(s) 79
LpnPI CCDG 2 cut(s) 21, 61
Lsp1109I GCAGC 1 cut(s) 8
MboII GAAGA 1 cut(s) 58
MnlI CCTC 4 cut(s) 135, 138, 169, 172
MseI TTAA 2 cut(s) 158, 186
MslI CAYNNNNRTG 2 cut(s) 36, 74
MspCI CTTAAG 1 cut(s) 185
MvnI CGCG 2 cut(s) 54, 63
MwoI GCNNNNNNNGC 2 cut(s) 18, 60
NlaIII CATG 1 cut(s) 79
NlaIV GGNNCC 1 cut(s) 40
OliI CACNNNNGTG 1 cut(s) 36
PceI AGGCCT 1 cut(s) 47
PkrI GCNGC 2 cut(s) 23, 53
PspN4I GGNNCC 1 cut(s) 40
RseI CAYNNNNRTG 2 cut(s) 36, 74
SaqAI TTAA 2 cut(s) 158, 186
SatI GCNGC 2 cut(s) 22, 52
SetI ASST 2 cut(s) 9, 40
SgeI CNNG 7 cut(s) 48, 55, 60, 65, 74, 88, 92
SmiMI CAYNNNNRTG 2 cut(s) 36, 74
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
SseBI AGGCCT 1 cut(s) 47
SsiI CCGC 4 cut(s) 52, 61, 79, 128
StuI AGGCCT 1 cut(s) 47
StyI CCWWGG 1 cut(s) 42
TauI GCSGC 1 cut(s) 54
Tru1I TTAA 2 cut(s) 158, 186
Tru9I TTAA 2 cut(s) 158, 186
TseI GCWGC 1 cut(s) 21
TspDTI ATGAA 2 cut(s) 17, 182
Vha464I CTTAAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.