AT2G15695

Eukaryotic protein of unknown function (DUF829)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0010502
Physical Location & Seq
Reverse (-)
6833880 .. 6836538
2659 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G15695.1

Sequence Viewer

Length: 1263 bp
ATGATCGGCGGTGGTAGGGTTTATTGGGGGAAGAAGTTAGATAAAGAGATGGAAGATGCGGCGGTTGTTGACGGTGGTGGATCTAACGGTGTTGTTGTGATCTTTGTTTGGAGCTCGATTAACGAGAACCAGCTTATGAATTTCGTTGATCTTTATTCTTCTCTTGGTTGGAATTCTCTTGTTTGCCGCGCTGATTTTCTCACCGCGGTTTATCCTGAAATGGCTCTTTCTTTAGCATTCCATCTTCTTTCTGAACTTGTTGAGGAGTTAAAGAGTAGACCATGTCCTGTTATCTTTCTAGCTTTCTCTGGTGCTCCTAAAGCTTGTATGTATAAAGTTCTACAGGTGATCATGGATGATTGTGAAGCTCAAATTCATCCGGATGATAGCCAGTTGGTTAGAACCTGTCTTTCTGGACATGTCTATGACTCTGGCCCGTTGGATTTTACGAGTGATTTGAATGTGAAATTCGCACTACATCCCACCATACGACGAATGTCTGGTCCTTCTAGACTAGTATCTTGGGTGGCTAAAGGGATTTCTTCCGGGCTTGATGGTTTATATCTTACAAGATTTGAATCCCAACGTAGTGAGTACTGGCAGGCCCTCTACTCATCGGTTGAAATTGGGGCTCCATATCTCATTTTGTGCTCCGAGAATGATGAACTTGCTCCTCTACAAGTAATTTCAAGCTTTACCCATCAATTGCAGGAACTGGGAGGAGAAGTTAAGGTTGTCAAGTGGAAAAATTCTCCTCATGCAGGACACTACGCACATAACCCTATACAATACCGGGCTGTTATCTCCAACTTTCTGGAGAAAGCCATATCAGTTCACTTACATAAAATCCGGCAGCTCGGAGAAAGAGCTCACACGCATGATGAAATCTCTGAGTTAATATGCGACCTTCAGAAAGTTGCTGTGAACTCTAACCAAAGCCTAAGAAGAGTAGCCACTGGGCCATGTGACCACTTTTTCTTACCTAGCTCAGCACCGTATCAAAGCAACAGCAACAACAGCGATCCATCATCTTCACAAGAAGAACAGAGAGAAAGATCGTCCTTCCGCCCACTCCAACCAACGAGCATAAACGCTCACAGCGTACTCGGGCAATTCCTATTCGACTCATGTGTTCCAAAGAACATCGAAGGATGGGATATCAGATTTGCGGGTTGTCTCAACGGTCAACCATATGCCACGTCCTCCTCCCGTAAGAACTCAAATCTTGGTTTTAAGAAACGCTTTTTCCGTTCAAGACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF829

Protein Analysis

420

Amino Acids

46.88

Weight (kDa)

6.54

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF829 PF05705 137 - 385 3e-41 Eukaryotic protein of unknown function (DUF829)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 277
AccII CGCG 2 cut(s) 189, 206
AccIII TCCGGA 1 cut(s) 379
AciI CCGC 8 cut(s) 9, 59, 62, 187, 204, 206, 1066, 1169
AclWI GGATC 2 cut(s) 88, 1016
AcsI RAATTY 5 cut(s) 139, 172, 372, 467, 748
AcuI CTGAAG 1 cut(s) 893
AfaI GTAC 2 cut(s) 596, 1104
AfiI CCNNNNNNNGG 1 cut(s) 761
AflIII ACRYGT 1 cut(s) 418
AgsI TTSAA 5 cut(s) 460, 578, 623, 690, 1254
AhlI ACTAGT 1 cut(s) 514
AjiI CACGTC 1 cut(s) 1200
AluBI AGCT 9 cut(s) 114, 133, 302, 323, 368, 693, 856, 869, 987
AluI AGCT 9 cut(s) 114, 133, 302, 323, 368, 693, 856, 869, 987
Alw21I GWGCWC 4 cut(s) 116, 316, 653, 871
Alw26I GTCTC 1 cut(s) 1181
AlwI GGATC 2 cut(s) 88, 1016
AlwNI CAGNNNCTG 1 cut(s) 715
Ama87I CYCGRG 1 cut(s) 1106
Aor13HI TCCGGA 1 cut(s) 379
AoxI GGCC 3 cut(s) 433, 603, 959
ApeKI GCWGC 1 cut(s) 853
ApoI RAATTY 5 cut(s) 139, 172, 372, 467, 748
ArsI GACNNNNNNTTYG 2 cut(s) 487, 519
AspLEI GCGC 1 cut(s) 191
AspS9I GGNCC 4 cut(s) 434, 503, 604, 959
AsuC2I CCSGG 2 cut(s) 547, 794
AsuHPI GGTGA 2 cut(s) 193, 358
AvaI CYCGRG 1 cut(s) 1106
AvaII GGWCC 1 cut(s) 503
BanII GRGCYC 3 cut(s) 116, 634, 871
Bbv12I GWGCWC 4 cut(s) 116, 316, 653, 871
BbvI GCAGC 1 cut(s) 865
BccI CCATC 6 cut(s) 43, 249, 548, 708, 1033, 1146
BclI TGATCA 1 cut(s) 348
BcnI CCSGG 2 cut(s) 547, 794
BcoDI GTCTC 1 cut(s) 1181
BcuI ACTAGT 1 cut(s) 514
BfaI CTAG 4 cut(s) 299, 510, 515, 984
BfmI CTRYAG 1 cut(s) 341
BisI GCNGC 3 cut(s) 60, 187, 854
BlpI GCTNAGC 1 cut(s) 988
BlsI GCNGC 3 cut(s) 61, 188, 855
BmcAI AGTACT 1 cut(s) 596
Bme1390I CCNGG 2 cut(s) 547, 794
Bme18I GGWCC 1 cut(s) 503
BmeT110I CYCGRG 1 cut(s) 1106
BmgBI CACGTC 1 cut(s) 1200
BmgT120I GGNCC 4 cut(s) 434, 503, 604, 959
BmiI GGNNCC 1 cut(s) 633
BmrFI CCNGG 2 cut(s) 547, 794
BmrI ACTGGG 2 cut(s) 725, 966
BmsI GCATC 1 cut(s) 46
BmuI ACTGGG 2 cut(s) 725, 966
BoxI GACNNNNGTC 1 cut(s) 496
BpmI CTGGAG 1 cut(s) 836
Bpu1102I GCTNAGC 1 cut(s) 988
BpuMI CCSGG 2 cut(s) 547, 794
BsaBI GATNNNNATC 1 cut(s) 577
BsaJI CCNNGG 1 cut(s) 204
BsaWI WCCGGW 1 cut(s) 379
BsaXI ACNNNNNCTCC 2 cut(s) 711, 741
Bsc4I CCNNNNNNNGG 1 cut(s) 761
Bse1I ACTGG 4 cut(s) 391, 602, 720, 961
Bse8I GATNNNNATC 1 cut(s) 577
BseAI TCCGGA 1 cut(s) 379
BseDI CCNNGG 1 cut(s) 204
BseGI GGATG 5 cut(s) 361, 376, 388, 478, 1157
BseJI GATNNNNATC 1 cut(s) 577
BseLI CCNNNNNNNGG 1 cut(s) 761
BseMII CTCAG 2 cut(s) 882, 1002
BseNI ACTGG 4 cut(s) 391, 602, 720, 961
BseRI GAGGAG 5 cut(s) 278, 663, 735, 744, 1195
BseXI GCAGC 1 cut(s) 865
Bsh1236I CGCG 2 cut(s) 189, 206
BshFI GGCC 3 cut(s) 435, 605, 961
BsiHKAI GWGCWC 4 cut(s) 116, 316, 653, 871
BsiHKCI CYCGRG 1 cut(s) 1106
BsiSI CCGG 4 cut(s) 380, 546, 793, 850
BslI CCNNNNNNNGG 1 cut(s) 761
BsmAI GTCTC 1 cut(s) 1181
BsmI GAATGC 1 cut(s) 236
BsnI GGCC 3 cut(s) 435, 605, 961
BsoBI CYCGRG 1 cut(s) 1106
Bsp1286I GDGCHC 5 cut(s) 116, 316, 634, 653, 871
Bsp13I TCCGGA 1 cut(s) 379
Bsp143I GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
Bsp1720I GCTNAGC 1 cut(s) 988
BspACI CCGC 8 cut(s) 9, 59, 62, 187, 204, 206, 1066, 1169
BspANI GGCC 3 cut(s) 435, 605, 961
BspCNI CTCAG 2 cut(s) 883, 1001
BspEI TCCGGA 1 cut(s) 379
BspFNI CGCG 2 cut(s) 189, 206
BspLI GGNNCC 1 cut(s) 633
BspPI GGATC 2 cut(s) 88, 1016
BsrI ACTGG 4 cut(s) 391, 602, 720, 961
BssECI CCNNGG 1 cut(s) 204
BssMI GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
Bst4CI ACNGT 4 cut(s) 74, 89, 996, 1184
Bst6I CTCTTC 1 cut(s) 940
BstC8I GCNNGC 1 cut(s) 603
BstDEI CTNAG 3 cut(s) 891, 941, 988
BstDSI CCRYGG 1 cut(s) 204
BstENI CCTNNNNNAGG 1 cut(s) 759
BstF5I GGATG 5 cut(s) 361, 376, 388, 478, 1157
BstFNI CGCG 2 cut(s) 189, 206
BstHHI GCGC 1 cut(s) 191
BstKTI GATC 7 cut(s) 6, 83, 102, 151, 351, 1024, 1058
BstMAI GTCTC 1 cut(s) 1181
BstMBI GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
BstMWI GCNNNNNNNGC 2 cut(s) 320, 1017
BstNSI RCATGY 1 cut(s) 422
BstPAI GACNNNNGTC 1 cut(s) 496
BstSCI CCNGG 2 cut(s) 545, 792
BstSFI CTRYAG 1 cut(s) 341
BstUI CGCG 2 cut(s) 189, 206
BstV1I GCAGC 1 cut(s) 865
BstX2I RGATCY 1 cut(s) 80
BstXI CCANNNNNNTGG 1 cut(s) 814
BstYI RGATCY 1 cut(s) 80
BsuRI GGCC 3 cut(s) 435, 605, 961
BtgI CCRYGG 1 cut(s) 204
BtrI CACGTC 1 cut(s) 1200
BtsCI GGATG 5 cut(s) 361, 376, 388, 478, 1157
BtsIMutI CAGTG 1 cut(s) 954
Cac8I GCNNGC 1 cut(s) 603
CaiI CAGNNNCTG 1 cut(s) 715
CfoI GCGC 1 cut(s) 191
Cfr13I GGNCC 4 cut(s) 434, 503, 604, 959
Cfr42I CCGCGG 1 cut(s) 207
Csp6I GTAC 2 cut(s) 595, 1103
CviAII CATG 7 cut(s) 282, 352, 419, 758, 878, 963, 1128
CviQI GTAC 2 cut(s) 595, 1103
DdeI CTNAG 3 cut(s) 891, 941, 988
DpnI GATC 7 cut(s) 5, 82, 101, 150, 350, 1023, 1057
DpnII GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
Eam1104I CTCTTC 1 cut(s) 940
EarI CTCTTC 1 cut(s) 940
EciI GGCGGA 1 cut(s) 1055
Ecl136II GAGCTC 2 cut(s) 114, 869
Eco24I GRGCYC 3 cut(s) 116, 634, 871
Eco32I GATATC 1 cut(s) 1159
Eco47I GGWCC 1 cut(s) 503
Eco53kI GAGCTC 2 cut(s) 114, 869
Eco57I CTGAAG 1 cut(s) 893
Eco88I CYCGRG 1 cut(s) 1106
EcoICRI GAGCTC 2 cut(s) 114, 869
EcoNI CCTNNNNNAGG 1 cut(s) 759
EcoO109I RGGNCCY 1 cut(s) 604
EcoRI GAATTC 1 cut(s) 172
EcoRV GATATC 1 cut(s) 1159
EcoT38I GRGCYC 3 cut(s) 116, 634, 871
FaeI CATG 7 cut(s) 285, 355, 422, 761, 881, 966, 1131
FalI AAGNNNNNCTT 2 cut(s) 1226, 1258
FatI CATG 7 cut(s) 281, 351, 418, 757, 877, 962, 1127
FauI CCCGC 1 cut(s) 1162
FauNDI CATATG 1 cut(s) 1192
FbaI TGATCA 1 cut(s) 348
FblI GTMKAC 1 cut(s) 277
Fnu4HI GCNGC 3 cut(s) 60, 187, 854
FokI GGATG 5 cut(s) 363, 368, 395, 465, 1164
FriOI GRGCYC 3 cut(s) 116, 634, 871
Fsp4HI GCNGC 3 cut(s) 60, 187, 854
FspBI CTAG 4 cut(s) 299, 510, 515, 984
GlaI GCGC 1 cut(s) 190
GluI GCNGC 3 cut(s) 60, 187, 854
GsuI CTGGAG 1 cut(s) 836
HaeIII GGCC 3 cut(s) 435, 605, 961
HapII CCGG 4 cut(s) 380, 546, 793, 850
HhaI GCGC 1 cut(s) 191
Hin1II CATG 7 cut(s) 285, 355, 422, 761, 881, 966, 1131
Hin6I GCGC 1 cut(s) 189
HinP1I GCGC 1 cut(s) 189
HincII GTYRAC 2 cut(s) 70, 1187
HindII GTYRAC 2 cut(s) 70, 1187
HindIII AAGCTT 2 cut(s) 321, 691
HinfI GANTC 3 cut(s) 428, 578, 1124
HpaII CCGG 4 cut(s) 380, 546, 793, 850
HphI GGTGA 2 cut(s) 193, 358
Hpy166II GTNNAC 5 cut(s) 70, 278, 835, 925, 1187
Hpy188I TCNGA 6 cut(s) 253, 655, 860, 892, 912, 1163
Hpy188III TCNNGA 6 cut(s) 215, 380, 414, 510, 815, 1254
Hpy8I GTNNAC 5 cut(s) 70, 278, 835, 925, 1187
Hpy99I CGWCG 1 cut(s) 495
HpyAV CCTTC 4 cut(s) 516, 917, 1072, 1142
HpyCH4III ACNGT 4 cut(s) 74, 89, 996, 1184
HpyCH4IV ACGT 2 cut(s) 586, 1199
HpyCH4V TGCA 2 cut(s) 709, 761
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 1017
HpyF3I CTNAG 3 cut(s) 891, 941, 988
HpySE526I ACGT 2 cut(s) 586, 1199
Hsp92II CATG 7 cut(s) 285, 355, 422, 761, 881, 966, 1131
HspAI GCGC 1 cut(s) 189
Kpn2I TCCGGA 1 cut(s) 379
Ksp22I TGATCA 1 cut(s) 348
KspI CCGCGG 1 cut(s) 207
Kzo9I GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
LmnI GCTCC 5 cut(s) 111, 319, 637, 656, 676
Lsp1109I GCAGC 1 cut(s) 865
LweI GCATC 1 cut(s) 46
MaeI CTAG 4 cut(s) 299, 510, 515, 984
MaeII ACGT 2 cut(s) 586, 1199
MaeIII GTNAC 1 cut(s) 965
MalI GATC 7 cut(s) 5, 82, 101, 150, 350, 1023, 1057
MboI GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
MboII GAAGA 8 cut(s) 43, 65, 150, 236, 534, 957, 1023, 1052
MfeI CAATTG 1 cut(s) 704
MflI RGATCY 1 cut(s) 80
MhlI GDGCHC 5 cut(s) 116, 316, 634, 653, 871
MluCI AATT 9 cut(s) 139, 172, 372, 467, 624, 684, 704, 748, 1112
MlyI GAGTC 2 cut(s) 422, 1118
MmeI TCCRAC 4 cut(s) 149, 420, 831, 1099
MnlI CCTC 7 cut(s) 256, 617, 684, 713, 765, 1213, 1216
MroI TCCGGA 1 cut(s) 379
MseI TTAA 5 cut(s) 120, 269, 729, 896, 1233
MslI CAYNNNNRTG 3 cut(s) 381, 423, 876
MspA1I CMGCKG 1 cut(s) 206
MspI CCGG 4 cut(s) 380, 546, 793, 850
MspR9I CCNGG 2 cut(s) 547, 794
MunI CAATTG 1 cut(s) 704
Mva1269I GAATGC 1 cut(s) 236
MvnI CGCG 2 cut(s) 189, 206
MwoI GCNNNNNNNGC 2 cut(s) 320, 1017
NciI CCSGG 2 cut(s) 547, 794
NdeI CATATG 1 cut(s) 1192
NdeII GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
NlaIII CATG 7 cut(s) 285, 355, 422, 761, 881, 966, 1131
NlaIV GGNNCC 1 cut(s) 633
NmuCI GTSAC 1 cut(s) 965
NspI RCATGY 1 cut(s) 422
PciI ACATGT 1 cut(s) 418
PcsI WCGNNNNNNNCGW 2 cut(s) 1098, 1246
PctI GAATGC 1 cut(s) 236
PfeI GAWTC 1 cut(s) 578
PflFI GACNNNGTC 1 cut(s) 282
PkrI GCNGC 3 cut(s) 61, 188, 855
PleI GAGTC 2 cut(s) 422, 1118
PpsI GAGTC 2 cut(s) 422, 1118
PscI ACATGT 1 cut(s) 418
PshAI GACNNNNGTC 1 cut(s) 496
Psp124BI GAGCTC 2 cut(s) 116, 871
PspN4I GGNNCC 1 cut(s) 633
PspPI GGNCC 4 cut(s) 434, 503, 604, 959
PstNI CAGNNNCTG 1 cut(s) 715
PsuI RGATCY 1 cut(s) 80
PsyI GACNNNGTC 1 cut(s) 282
RsaI GTAC 2 cut(s) 596, 1104
RsaNI GTAC 2 cut(s) 595, 1103
RseI CAYNNNNRTG 3 cut(s) 381, 423, 876
SacI GAGCTC 2 cut(s) 116, 871
SacII CCGCGG 1 cut(s) 207
SaqAI TTAA 5 cut(s) 120, 269, 729, 896, 1233
SatI GCNGC 3 cut(s) 60, 187, 854
Sau3AI GATC 7 cut(s) 3, 80, 99, 148, 348, 1021, 1055
Sau96I GGNCC 4 cut(s) 434, 503, 604, 959
ScaI AGTACT 1 cut(s) 596
SchI GAGTC 2 cut(s) 422, 1118
ScrFI CCNGG 2 cut(s) 547, 794
SduI GDGCHC 5 cut(s) 116, 316, 634, 653, 871
SfaNI GCATC 1 cut(s) 46
SfcI CTRYAG 1 cut(s) 341
Sfr303I CCGCGG 1 cut(s) 207
SgrBI CCGCGG 1 cut(s) 207
SinI GGWCC 1 cut(s) 503
SmiMI CAYNNNNRTG 3 cut(s) 381, 423, 876
SpeI ACTAGT 1 cut(s) 514
Sse9I AATT 9 cut(s) 139, 172, 372, 467, 624, 684, 704, 748, 1112
SsiI CCGC 8 cut(s) 9, 59, 62, 187, 204, 206, 1066, 1169
SspMI CTAG 4 cut(s) 299, 510, 515, 984
SstI GAGCTC 2 cut(s) 116, 871
StyD4I CCNGG 2 cut(s) 545, 792
TaaI ACNGT 4 cut(s) 74, 89, 996, 1184
TaiI ACGT 2 cut(s) 589, 1202
TaqI TCGA 3 cut(s) 116, 1122, 1146
TasI AATT 9 cut(s) 139, 172, 372, 467, 624, 684, 704, 748, 1112
TatI WGTACW 1 cut(s) 594
TauI GCSGC 2 cut(s) 62, 189
TfiI GAWTC 1 cut(s) 578
Tru1I TTAA 5 cut(s) 120, 269, 729, 896, 1233
Tru9I TTAA 5 cut(s) 120, 269, 729, 896, 1233
TscAI CASTG 1 cut(s) 961
TseFI GTSAC 1 cut(s) 965
TseI GCWGC 1 cut(s) 853
Tsp45I GTSAC 1 cut(s) 965
TspDTI ATGAA 4 cut(s) 152, 365, 678, 897
TspGWI ACGGA 1 cut(s) 1238
TspRI CASTG 1 cut(s) 961
Tth111I GACNNNGTC 1 cut(s) 282
VpaK11BI GGWCC 1 cut(s) 503
XagI CCTNNNNNAGG 1 cut(s) 759
XapI RAATTY 5 cut(s) 139, 172, 372, 467, 748
XbaI TCTAGA 1 cut(s) 509
XceI RCATGY 1 cut(s) 422
XmiI GTMKAC 1 cut(s) 277
XspI CTAG 4 cut(s) 299, 510, 515, 984
ZrmI AGTACT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.