BEST Arabidopsis thaliana protein match is DENN (AEX-3) domain-containing protein (TAIR AT5G35560.1)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20320 AT2G20320 |
| fragaria_vesca | FvH4_2g20280 |
| malus_domestica | MD05G1186700.v1.1 MD10G1174800.v1.1 |
| prunus_persica | Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 |
| pyrus_communis | pycom05g17090 pycom10g15050 |
| rosa_chinensis | RchiOBHm_Chr6g0286081 |
| rosa_laevigata | RLG00000012584 |
| rosa_multiflora | Rmu_sc0023663.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00182470 |
| rosa_rugosa | Rorug06G0178800 |
| rosa_samantha | Rh3BG272300 Rh6AG291200 Rh6BG294500 Rh6CG294100 Rh6DG286100 |
| rosa_wichuraiana | Rw6G025090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2486, 2823 |
| AatII | GACGTC | 1 cut(s) | 2672 |
| AbsI | CCTCGAGG | 1 cut(s) | 2606 |
| Acc65I | GGTACC | 2 cut(s) | 239, 972 |
| AccB1I | GGYRCC | 3 cut(s) | 239, 972, 2611 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2215, 2257 |
| AccI | GTMKAC | 4 cut(s) | 762, 2282, 2635, 3024 |
| AccII | CGCG | 2 cut(s) | 2852, 3058 |
| AccIII | TCCGGA | 1 cut(s) | 1063 |
| AciI | CCGC | 5 cut(s) | 722, 785, 1779, 2202, 2850 |
| AclWI | GGATC | 3 cut(s) | 1008, 1257, 2021 |
| AcoI | YGGCCR | 2 cut(s) | 1996, 2546 |
| AcsI | RAATTY | 5 cut(s) | 233, 1072, 1622, 1816, 1930 |
| AcuI | CTGAAG | 4 cut(s) | 429, 545, 1848, 1959 |
| AcyI | GRCGYC | 1 cut(s) | 2669 |
| AfaI | GTAC | 6 cut(s) | 241, 408, 718, 974, 2523, 2535 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 800, 1757, 1882, 2215, 2231, 2257, 2500, 2501 |
| AflIII | ACRYGT | 2 cut(s) | 1426, 2018 |
| AgeI | ACCGGT | 1 cut(s) | 2614 |
| AhlI | ACTAGT | 1 cut(s) | 299 |
| AjnI | CCWGG | 7 cut(s) | 835, 1270, 1453, 1673, 2256, 2584, 2989 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 578, 610, 2121, 2153 |
| Alw21I | GWGCWC | 1 cut(s) | 2798 |
| AlwI | GGATC | 3 cut(s) | 1008, 1257, 2021 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2372 |
| Ama87I | CYCGRG | 1 cut(s) | 2606 |
| Aor13HI | TCCGGA | 1 cut(s) | 1063 |
| AoxI | GGCC | 6 cut(s) | 926, 1079, 1172, 1996, 2379, 2546 |
| ApeKI | GCWGC | 7 cut(s) | 554, 1646, 1649, 1781, 1784, 2366, 2369 |
| ApoI | RAATTY | 5 cut(s) | 233, 1072, 1622, 1816, 1930 |
| AsiGI | ACCGGT | 1 cut(s) | 2614 |
| Asp718I | GGTACC | 2 cut(s) | 239, 972 |
| AspA2I | CCTAGG | 1 cut(s) | 2030 |
| AspLEI | GCGC | 1 cut(s) | 813 |
| AspS9I | GGNCC | 5 cut(s) | 773, 927, 1172, 1302, 2034 |
| AsuC2I | CCSGG | 2 cut(s) | 1221, 2816 |
| AsuHPI | GGTGA | 7 cut(s) | 329, 444, 783, 1157, 1467, 1701, 1843 |
| AvaI | CYCGRG | 1 cut(s) | 2606 |
| AvaII | GGWCC | 3 cut(s) | 773, 1302, 2034 |
| AvrII | CCTAGG | 1 cut(s) | 2030 |
| AxyI | CCTNAGG | 1 cut(s) | 942 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 492, 525, 956, 989 |
| BalI | TGGCCA | 1 cut(s) | 1998 |
| BanI | GGYRCC | 3 cut(s) | 239, 972, 2611 |
| BanII | GRGCYC | 1 cut(s) | 2798 |
| BbsI | GAAGAC | 2 cut(s) | 86, 2815 |
| Bbv12I | GWGCWC | 1 cut(s) | 2798 |
| BbvCI | CCTCAGC | 1 cut(s) | 2373 |
| BbvI | GCAGC | 7 cut(s) | 566, 1633, 1636, 1771, 1793, 2356, 2378 |
| BccI | CCATC | 9 cut(s) | 98, 114, 272, 667, 1114, 1315, 1672, 1729, 1751 |
| BceAI | ACGGC | 2 cut(s) | 1683, 2421 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1515, 1549 |
| BciT130I | CCWGG | 7 cut(s) | 837, 1272, 1455, 1675, 2258, 2586, 2991 |
| BciVI | GTATCC | 3 cut(s) | 62, 493, 1954 |
| BclI | TGATCA | 1 cut(s) | 1684 |
| BcnI | CCSGG | 2 cut(s) | 1221, 2816 |
| BcuI | ACTAGT | 1 cut(s) | 299 |
| BfaI | CTAG | 7 cut(s) | 300, 1253, 2031, 2085, 2306, 2684, 2805 |
| BfmI | CTRYAG | 2 cut(s) | 623, 1785 |
| BfuI | GTATCC | 3 cut(s) | 62, 493, 1954 |
| BlnI | CCTAGG | 1 cut(s) | 2030 |
| BmcAI | AGTACT | 1 cut(s) | 2523 |
| Bme1390I | CCNGG | 9 cut(s) | 837, 1221, 1272, 1455, 1675, 2258, 2586, 2816, 2991 |
| Bme18I | GGWCC | 3 cut(s) | 773, 1302, 2034 |
| BmeT110I | CYCGRG | 1 cut(s) | 2606 |
| BmgT120I | GGNCC | 5 cut(s) | 773, 927, 1172, 1302, 2034 |
| BmrFI | CCNGG | 9 cut(s) | 837, 1221, 1272, 1455, 1675, 2258, 2586, 2816, 2991 |
| BmsI | GCATC | 5 cut(s) | 626, 715, 870, 1390, 1517 |
| BoxI | GACNNNNGTC | 2 cut(s) | 358, 1547 |
| BpiI | GAAGAC | 2 cut(s) | 86, 2815 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 689, 721 |
| BpmI | CTGGAG | 6 cut(s) | 762, 1512, 1821, 1992, 2277, 2478 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2373 |
| BpuEI | CTTGAG | 2 cut(s) | 265, 2884 |
| BpuMI | CCSGG | 2 cut(s) | 1221, 2816 |
| Bsa29I | ATCGAT | 2 cut(s) | 218, 2979 |
| BsaHI | GRCGYC | 1 cut(s) | 2669 |
| BsaI | GGTCTC | 2 cut(s) | 1441, 2393 |
| BsaJI | CCNNGG | 6 cut(s) | 1168, 1453, 2030, 2230, 2256, 2382 |
| BsaWI | WCCGGW | 3 cut(s) | 1063, 2575, 2614 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1010, 1040, 2275, 2305 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 800, 1757, 1882, 2215, 2231, 2257, 2500, 2501 |
| Bse118I | RCCGGY | 2 cut(s) | 924, 2614 |
| Bse1I | ACTGG | 6 cut(s) | 501, 776, 1082, 1854, 2160, 2294 |
| Bse21I | CCTNAGG | 1 cut(s) | 942 |
| Bse3DI | GCAATG | 4 cut(s) | 1242, 1809, 2729, 2836 |
| BseAI | TCCGGA | 1 cut(s) | 1063 |
| BseBI | CCWGG | 7 cut(s) | 837, 1272, 1455, 1675, 2258, 2586, 2991 |
| BseCI | ATCGAT | 2 cut(s) | 218, 2979 |
| BseDI | CCNNGG | 6 cut(s) | 1168, 1453, 2030, 2230, 2256, 2382 |
| BseGI | GGATG | 9 cut(s) | 109, 125, 469, 586, 730, 1060, 1740, 2598, 2691 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 800, 1757, 1882, 2215, 2231, 2257, 2500, 2501 |
| BseMI | GCAATG | 4 cut(s) | 1242, 1809, 2729, 2836 |
| BseMII | CTCAG | 6 cut(s) | 933, 1327, 2364, 2750, 2771, 2913 |
| BseNI | ACTGG | 6 cut(s) | 501, 776, 1082, 1854, 2160, 2294 |
| BseRI | GAGGAG | 6 cut(s) | 200, 221, 262, 301, 1509, 2390 |
| BseXI | GCAGC | 7 cut(s) | 566, 1633, 1636, 1771, 1793, 2356, 2378 |
| BsgI | GTGCAG | 1 cut(s) | 1503 |
| Bsh1236I | CGCG | 2 cut(s) | 2852, 3058 |
| BshFI | GGCC | 6 cut(s) | 928, 1081, 1174, 1998, 2381, 2548 |
| BshNI | GGYRCC | 3 cut(s) | 239, 972, 2611 |
| BshTI | ACCGGT | 1 cut(s) | 2614 |
| BshVI | ATCGAT | 2 cut(s) | 218, 2979 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2798 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2606 |
| BsiSI | CCGG | 6 cut(s) | 925, 1064, 1221, 2576, 2615, 2816 |
| BslFI | GGGAC | 3 cut(s) | 844, 1535, 1963 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 800, 1757, 1882, 2215, 2231, 2257, 2500, 2501 |
| BsmBI | CGTCTC | 3 cut(s) | 27, 222, 1890 |
| BsmFI | GGGAC | 3 cut(s) | 844, 1535, 1963 |
| BsmI | GAATGC | 2 cut(s) | 184, 1483 |
| BsnI | GGCC | 6 cut(s) | 928, 1081, 1174, 1998, 2381, 2548 |
| Bso31I | GGTCTC | 2 cut(s) | 1441, 2393 |
| BsoBI | CYCGRG | 1 cut(s) | 2606 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2798 |
| Bsp13I | TCCGGA | 1 cut(s) | 1063 |
| Bsp143I | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| Bsp19I | CCATGG | 1 cut(s) | 2382 |
| Bsp68I | TCGCGA | 1 cut(s) | 3058 |
| BspACI | CCGC | 5 cut(s) | 722, 785, 1779, 2202, 2850 |
| BspANI | GGCC | 6 cut(s) | 928, 1081, 1174, 1998, 2381, 2548 |
| BspCNI | CTCAG | 6 cut(s) | 934, 1326, 2365, 2749, 2770, 2912 |
| BspDI | ATCGAT | 2 cut(s) | 218, 2979 |
| BspEI | TCCGGA | 1 cut(s) | 1063 |
| BspFNI | CGCG | 2 cut(s) | 2852, 3058 |
| BspMAI | CTGCAG | 2 cut(s) | 627, 1789 |
| BspPI | GGATC | 3 cut(s) | 1008, 1257, 2021 |
| BspQI | GCTCTTC | 1 cut(s) | 2338 |
| BspT107I | GGYRCC | 3 cut(s) | 239, 972, 2611 |
| BspTNI | GGTCTC | 2 cut(s) | 1441, 2393 |
| BsrDI | GCAATG | 4 cut(s) | 1242, 1809, 2729, 2836 |
| BsrFI | RCCGGY | 2 cut(s) | 924, 2614 |
| BsrI | ACTGG | 6 cut(s) | 501, 776, 1082, 1854, 2160, 2294 |
| BssAI | RCCGGY | 2 cut(s) | 924, 2614 |
| BssECI | CCNNGG | 6 cut(s) | 1168, 1453, 2030, 2230, 2256, 2382 |
| BssMI | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| BssNAI | GTATAC | 3 cut(s) | 763, 2283, 2636 |
| BssNI | GRCGYC | 1 cut(s) | 2669 |
| BssT1I | CCWWGG | 2 cut(s) | 2030, 2382 |
| Bst1107I | GTATAC | 3 cut(s) | 763, 2283, 2636 |
| Bst2UI | CCWGG | 7 cut(s) | 837, 1272, 1455, 1675, 2258, 2586, 2991 |
| Bst6I | CTCTTC | 4 cut(s) | 712, 991, 1083, 2338 |
| BstACI | GRCGYC | 1 cut(s) | 2669 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1400, 1775 |
| BstC8I | GCNNGC | 5 cut(s) | 1023, 1654, 2454, 2727, 2841 |
| BstDEI | CTNAG | 9 cut(s) | 476, 942, 949, 1313, 2373, 2736, 2757, 2856, 2899 |
| BstDSI | CCRYGG | 3 cut(s) | 1168, 2230, 2382 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 798 |
| BstF5I | GGATG | 9 cut(s) | 109, 125, 469, 586, 730, 1060, 1740, 2598, 2691 |
| BstFNI | CGCG | 2 cut(s) | 2852, 3058 |
| BstHHI | GCGC | 1 cut(s) | 813 |
| BstKTI | GATC | 7 cut(s) | 1003, 1252, 1321, 1687, 1881, 2029, 3001 |
| BstMBI | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| BstNI | CCWGG | 7 cut(s) | 837, 1272, 1455, 1675, 2258, 2586, 2991 |
| BstNSI | RCATGY | 5 cut(s) | 561, 1430, 1656, 2022, 2725 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 358, 1547 |
| BstSCI | CCNGG | 9 cut(s) | 835, 1219, 1270, 1453, 1673, 2256, 2584, 2814, 2989 |
| BstSFI | CTRYAG | 2 cut(s) | 623, 1785 |
| BstUI | CGCG | 2 cut(s) | 2852, 3058 |
| BstV1I | GCAGC | 7 cut(s) | 566, 1633, 1636, 1771, 1793, 2356, 2378 |
| BstV2I | GAAGAC | 2 cut(s) | 86, 2815 |
| BstX2I | RGATCY | 1 cut(s) | 1249 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2556 |
| BstYI | RGATCY | 1 cut(s) | 1249 |
| BstZ17I | GTATAC | 3 cut(s) | 763, 2283, 2636 |
| Bsu15I | ATCGAT | 2 cut(s) | 218, 2979 |
| Bsu36I | CCTNAGG | 1 cut(s) | 942 |
| BsuI | GTATCC | 3 cut(s) | 62, 493, 1954 |
| BsuRI | GGCC | 6 cut(s) | 928, 1081, 1174, 1998, 2381, 2548 |
| BsuTUI | ATCGAT | 2 cut(s) | 218, 2979 |
| BtgI | CCRYGG | 3 cut(s) | 1168, 2230, 2382 |
| BtsCI | GGATG | 9 cut(s) | 109, 125, 469, 586, 730, 1060, 1740, 2598, 2691 |
| BtsI | GCAGTG | 3 cut(s) | 1467, 1773, 2447 |
| BtuMI | TCGCGA | 1 cut(s) | 3058 |
| Cac8I | GCNNGC | 5 cut(s) | 1023, 1654, 2454, 2727, 2841 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2372 |
| CfoI | GCGC | 1 cut(s) | 813 |
| Cfr10I | RCCGGY | 2 cut(s) | 924, 2614 |
| Cfr13I | GGNCC | 5 cut(s) | 773, 927, 1172, 1302, 2034 |
| ClaI | ATCGAT | 2 cut(s) | 218, 2979 |
| CseI | GACGC | 5 cut(s) | 855, 1014, 1229, 1461, 1592 |
| Csp6I | GTAC | 6 cut(s) | 240, 407, 717, 973, 2522, 2534 |
| CspAI | ACCGGT | 1 cut(s) | 2614 |
| CviQI | GTAC | 6 cut(s) | 240, 407, 717, 973, 2522, 2534 |
| DdeI | CTNAG | 9 cut(s) | 476, 942, 949, 1313, 2373, 2736, 2757, 2856, 2899 |
| DpnI | GATC | 7 cut(s) | 1002, 1251, 1320, 1686, 1880, 2028, 3000 |
| DpnII | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| DraI | TTTAAA | 1 cut(s) | 1210 |
| EaeI | YGGCCR | 2 cut(s) | 1996, 2546 |
| Eam1104I | CTCTTC | 4 cut(s) | 712, 991, 1083, 2338 |
| EarI | CTCTTC | 4 cut(s) | 712, 991, 1083, 2338 |
| Ecl136II | GAGCTC | 1 cut(s) | 2796 |
| Eco130I | CCWWGG | 2 cut(s) | 2030, 2382 |
| Eco24I | GRGCYC | 1 cut(s) | 2798 |
| Eco31I | GGTCTC | 2 cut(s) | 1441, 2393 |
| Eco47I | GGWCC | 3 cut(s) | 773, 1302, 2034 |
| Eco53kI | GAGCTC | 1 cut(s) | 2796 |
| Eco57I | CTGAAG | 4 cut(s) | 429, 545, 1848, 1959 |
| Eco81I | CCTNAGG | 1 cut(s) | 942 |
| Eco88I | CYCGRG | 1 cut(s) | 2606 |
| EcoICRI | GAGCTC | 1 cut(s) | 2796 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 798 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1302, 2034 |
| EcoRI | GAATTC | 1 cut(s) | 233 |
| EcoRII | CCWGG | 7 cut(s) | 835, 1270, 1453, 1673, 2256, 2584, 2989 |
| EcoT14I | CCWWGG | 2 cut(s) | 2030, 2382 |
| EcoT38I | GRGCYC | 1 cut(s) | 2798 |
| ErhI | CCWWGG | 2 cut(s) | 2030, 2382 |
| Esp3I | CGTCTC | 3 cut(s) | 27, 222, 1890 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 28 |
| FaqI | GGGAC | 3 cut(s) | 844, 1535, 1963 |
| FbaI | TGATCA | 1 cut(s) | 1684 |
| FblI | GTMKAC | 4 cut(s) | 762, 2282, 2635, 3024 |
| FokI | GGATG | 9 cut(s) | 116, 132, 476, 593, 737, 1047, 1747, 2605, 2678 |
| FriOI | GRGCYC | 1 cut(s) | 2798 |
| FspBI | CTAG | 7 cut(s) | 300, 1253, 2031, 2085, 2306, 2684, 2805 |
| GlaI | GCGC | 1 cut(s) | 812 |
| GsuI | CTGGAG | 6 cut(s) | 762, 1512, 1821, 1992, 2277, 2478 |
| HaeIII | GGCC | 6 cut(s) | 928, 1081, 1174, 1998, 2381, 2548 |
| HapII | CCGG | 6 cut(s) | 925, 1064, 1221, 2576, 2615, 2816 |
| HgaI | GACGC | 5 cut(s) | 855, 1014, 1229, 1461, 1592 |
| HhaI | GCGC | 1 cut(s) | 813 |
| Hin1I | GRCGYC | 1 cut(s) | 2669 |
| Hin6I | GCGC | 1 cut(s) | 811 |
| HinP1I | GCGC | 1 cut(s) | 811 |
| HincII | GTYRAC | 3 cut(s) | 192, 1542, 2689 |
| HindII | GTYRAC | 3 cut(s) | 192, 1542, 2689 |
| HpaI | GTTAAC | 1 cut(s) | 2689 |
| HpaII | CCGG | 6 cut(s) | 925, 1064, 1221, 2576, 2615, 2816 |
| HphI | GGTGA | 7 cut(s) | 329, 444, 783, 1157, 1467, 1701, 1843 |
| HpyCH4IV | ACGT | 5 cut(s) | 36, 146, 759, 1976, 2669 |
| HpyF3I | CTNAG | 9 cut(s) | 476, 942, 949, 1313, 2373, 2736, 2757, 2856, 2899 |
| HpySE526I | ACGT | 5 cut(s) | 36, 146, 759, 1976, 2669 |
| Hsp92I | GRCGYC | 1 cut(s) | 2669 |
| HspAI | GCGC | 1 cut(s) | 811 |
| Kpn2I | TCCGGA | 1 cut(s) | 1063 |
| KpnI | GGTACC | 2 cut(s) | 243, 976 |
| Ksp22I | TGATCA | 1 cut(s) | 1684 |
| KspAI | GTTAAC | 1 cut(s) | 2689 |
| Kzo9I | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| LguI | GCTCTTC | 1 cut(s) | 2338 |
| LmnI | GCTCC | 4 cut(s) | 984, 1018, 1192, 2770 |
| Lsp1109I | GCAGC | 7 cut(s) | 566, 1633, 1636, 1771, 1793, 2356, 2378 |
| LweI | GCATC | 5 cut(s) | 626, 715, 870, 1390, 1517 |
| MaeI | CTAG | 7 cut(s) | 300, 1253, 2031, 2085, 2306, 2684, 2805 |
| MaeII | ACGT | 5 cut(s) | 36, 146, 759, 1976, 2669 |
| MalI | GATC | 7 cut(s) | 1002, 1251, 1320, 1686, 1880, 2028, 3000 |
| MboI | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| MflI | RGATCY | 1 cut(s) | 1249 |
| MhlI | GDGCHC | 1 cut(s) | 2798 |
| MlsI | TGGCCA | 1 cut(s) | 1998 |
| MluNI | TGGCCA | 1 cut(s) | 1998 |
| MmeI | TCCRAC | 3 cut(s) | 129, 369, 576 |
| Mox20I | TGGCCA | 1 cut(s) | 1998 |
| MroI | TCCGGA | 1 cut(s) | 1063 |
| MscI | TGGCCA | 1 cut(s) | 1998 |
| MslI | CAYNNNNRTG | 4 cut(s) | 54, 1525, 2178, 2554 |
| Msp20I | TGGCCA | 1 cut(s) | 1998 |
| MspA1I | CMGCKG | 2 cut(s) | 1784, 2369 |
| MspI | CCGG | 6 cut(s) | 925, 1064, 1221, 2576, 2615, 2816 |
| MspR9I | CCNGG | 9 cut(s) | 837, 1221, 1272, 1455, 1675, 2258, 2586, 2816, 2991 |
| Mva1269I | GAATGC | 2 cut(s) | 184, 1483 |
| MvaI | CCWGG | 7 cut(s) | 837, 1272, 1455, 1675, 2258, 2586, 2991 |
| MvnI | CGCG | 2 cut(s) | 2852, 3058 |
| NciI | CCSGG | 2 cut(s) | 1221, 2816 |
| NcoI | CCATGG | 1 cut(s) | 2382 |
| NdeII | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| NmeAIII | GCCGAG | 1 cut(s) | 33 |
| NmuCI | GTSAC | 7 cut(s) | 789, 1026, 1163, 1473, 1805, 1849, 2445 |
| NruI | TCGCGA | 1 cut(s) | 3058 |
| NspI | RCATGY | 5 cut(s) | 561, 1430, 1656, 2022, 2725 |
| PaeI | GCATGC | 1 cut(s) | 1656 |
| PaeR7I | CTCGAG | 1 cut(s) | 2606 |
| PciI | ACATGT | 2 cut(s) | 1426, 2018 |
| PciSI | GCTCTTC | 1 cut(s) | 2338 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3062 |
| PctI | GAATGC | 2 cut(s) | 184, 1483 |
| PfeI | GAWTC | 7 cut(s) | 437, 1201, 1364, 2183, 2339, 2542, 2981 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2215, 2257 |
| PfoI | TCCNGGA | 3 cut(s) | 835, 1219, 1673 |
| PinAI | ACCGGT | 1 cut(s) | 2614 |
| PpuMI | RGGWCCY | 2 cut(s) | 1302, 2034 |
| PscI | ACATGT | 2 cut(s) | 1426, 2018 |
| PshAI | GACNNNNGTC | 2 cut(s) | 358, 1547 |
| PsiI | TTATAA | 2 cut(s) | 2486, 2823 |
| Psp124BI | GAGCTC | 1 cut(s) | 2798 |
| Psp5II | RGGWCCY | 2 cut(s) | 1302, 2034 |
| Psp6I | CCWGG | 7 cut(s) | 835, 1270, 1453, 1673, 2256, 2584, 2989 |
| PspGI | CCWGG | 7 cut(s) | 835, 1270, 1453, 1673, 2256, 2584, 2989 |
| PspPI | GGNCC | 5 cut(s) | 773, 927, 1172, 1302, 2034 |
| PspPPI | RGGWCCY | 2 cut(s) | 1302, 2034 |
| PspXI | VCTCGAGB | 1 cut(s) | 2606 |
| PstI | CTGCAG | 2 cut(s) | 627, 1789 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2372 |
| PsuI | RGATCY | 1 cut(s) | 1249 |
| PvuII | CAGCTG | 2 cut(s) | 1784, 2369 |
| RruI | TCGCGA | 1 cut(s) | 3058 |
| RsaI | GTAC | 6 cut(s) | 241, 408, 718, 974, 2523, 2535 |
| RsaNI | GTAC | 6 cut(s) | 240, 407, 717, 973, 2522, 2534 |
| RseI | CAYNNNNRTG | 4 cut(s) | 54, 1525, 2178, 2554 |
| SacI | GAGCTC | 1 cut(s) | 2798 |
| SapI | GCTCTTC | 1 cut(s) | 2338 |
| Sau3AI | GATC | 7 cut(s) | 1000, 1249, 1318, 1684, 1878, 2026, 2998 |
| Sau96I | GGNCC | 5 cut(s) | 773, 927, 1172, 1302, 2034 |
| ScaI | AGTACT | 1 cut(s) | 2523 |
| ScrFI | CCNGG | 9 cut(s) | 837, 1221, 1272, 1455, 1675, 2258, 2586, 2816, 2991 |
| SduI | GDGCHC | 1 cut(s) | 2798 |
| SfaNI | GCATC | 5 cut(s) | 626, 715, 870, 1390, 1517 |
| SfcI | CTRYAG | 2 cut(s) | 623, 1785 |
| Sfr274I | CTCGAG | 1 cut(s) | 2606 |
| SinI | GGWCC | 3 cut(s) | 773, 1302, 2034 |
| SlaI | CTCGAG | 1 cut(s) | 2606 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 54, 1525, 2178, 2554 |
| SmlI | CTYRAG | 3 cut(s) | 244, 2606, 2863 |
| SmoI | CTYRAG | 3 cut(s) | 244, 2606, 2863 |
| SpeI | ACTAGT | 1 cut(s) | 299 |
| SphI | GCATGC | 1 cut(s) | 1656 |
| SsiI | CCGC | 5 cut(s) | 722, 785, 1779, 2202, 2850 |
| SspMI | CTAG | 7 cut(s) | 300, 1253, 2031, 2085, 2306, 2684, 2805 |
| SstI | GAGCTC | 1 cut(s) | 2798 |
| StyD4I | CCNGG | 9 cut(s) | 835, 1219, 1270, 1453, 1673, 2256, 2584, 2814, 2989 |
| StyI | CCWWGG | 2 cut(s) | 2030, 2382 |
| TaiI | ACGT | 5 cut(s) | 39, 149, 762, 1979, 2672 |
| TaqII | GACCGA | 1 cut(s) | 98 |
| TatI | WGTACW | 2 cut(s) | 716, 2521 |
| TauI | GCSGC | 3 cut(s) | 1781, 2205, 2852 |
| TfiI | GAWTC | 7 cut(s) | 437, 1201, 1364, 2183, 2339, 2542, 2981 |
| TseFI | GTSAC | 7 cut(s) | 789, 1026, 1163, 1473, 1805, 1849, 2445 |
| TseI | GCWGC | 7 cut(s) | 554, 1646, 1649, 1781, 1784, 2366, 2369 |
| Tsp45I | GTSAC | 7 cut(s) | 789, 1026, 1163, 1473, 1805, 1849, 2445 |
| TspGWI | ACGGA | 5 cut(s) | 35, 1088, 1151, 1814, 1914 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2215, 2257 |
| VpaK11BI | GGWCC | 3 cut(s) | 773, 1302, 2034 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 798 |
| XapI | RAATTY | 5 cut(s) | 233, 1072, 1622, 1816, 1930 |
| XceI | RCATGY | 5 cut(s) | 561, 1430, 1656, 2022, 2725 |
| XhoI | CTCGAG | 1 cut(s) | 2606 |
| XmaJI | CCTAGG | 1 cut(s) | 2030 |
| XmiI | GTMKAC | 4 cut(s) | 762, 2282, 2635, 3024 |
| XspI | CTAG | 7 cut(s) | 300, 1253, 2031, 2085, 2306, 2684, 2805 |
| ZraI | GACGTC | 1 cut(s) | 2670 |
| ZrmI | AGTACT | 1 cut(s) | 2523 |