Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006052

Physical Location & Seq

Genomic Coordinates Forward (+)

48296226 .. 48304204

Gene Structure 7979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G025090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGAGCTTAGTGTTTGAAATGGATGCAAAAGAAGATGCTGAAGGACACGAAGAAGGGGGTTCGTCCCCTATTCAGGTTATATCTGAGGAGGCATGCACAGTGGCAGGAGAAGCCCCCAATAACTTGGCCAGTCCGAATATGCCGCCATTGGCACCGGGGAATGGGCATAGGCGGACCCAAAGTGATGTTTTGACCACCAAACAGAGGCGCAGTCATAGCTTTCAGAGATTGAAAAACCAAATGCAGAAGGCTTGGAGATGGGGGACCAATCATGATTCCCGGCTGGCTTTCAATCCTGAGGTTTTGGCAAACCAAAAACGCCAGTGGTATCAGCTTCACTCCAAATCAAAGGGTCATGTAAATTATCAGGAGCCAACTTCACTCTTTGAGCATTTTATAATTGCGGGGCTTCATCCAGATACTAATCTTAAAAATGCCGAGGCAGCATTCATTAAAAGAAAGAGATGGGAGACGGACATGATAAGCTATGGAATTACCGACCTTAAATTACTGCAGCAGAAGGGACCTCCAGCCCCAATATTAGAACCTCAGGTACTTTTTAAATATCCTCCAGGGAAGAGGCTAGCAATGCGTTTGAAAGATTTAGCTTCCTTTTGTTTTCCTGGAGGTGTTAAGGCACGATTAATGGAGAAGACTCCATCACTAAGTGACCTTAATCAAATTGTGTATGGACAGGAGCATTTAGGCAAAGATGATTTAGCATTTATCTTTTCACTCAAGGTAGCAGACAATGCAACACTTTATGGTATTTGCCTACATGTGTTGGAAATAGTTCAGAGGCCTCCTGCTATCTTAGGCATCACATCACCTCTTCCTCAGTCATCTGAAGGACTCTTCCGTTTTTTGGTTTCTGCACCTCGGTGCTACTGTCTGTTATCCAAATATCCTTTTTTTGAGTTACATTACGAGATGTTGAACAGTATCATTCAACAGGAGCGCCTGAGTAGAATAACACAACTTGCAAATGGAATGAGCCTCAATGACCATGTCCCTTCAATGCCCAAAATAGATGATGAAATGAATAATAATGAGGAGTCCCCTGAGACAGAGTCTTTTGATGATTGGATGAATTCTGCAATCCCTGTTGACAGTGCAATAGCCCGTACAGCTGTTGCTGCAGGAATTACACCTGATGATGAGACTTCGACTTCTTCACTCAAGATATGGGAACCACAGTCCCCGGAAAGTGCTTCTGCTAGTGAGGCTCCAGATTTTATTCAAGTACGCTATTTAGATAAGGATGATAGAAAGGATTCACAATGCTTTGATGACTGTGGTTCCTCAGAAACTTCAGAAAGAATATATGGAAGTCACACAAATGGCCATACTTCACGCGAGAGTCTTGGGAGTTCTGAATCTCTATTTAGTCCAGCTAGAAGCATGTCAGAGGATGATGATGATGACCTTTCCTCAACTTGTGAGCAAGATTTTAGCGATGACTTGATAATGGCATGGGCTAGGGAGAATAAAAACGATTTGCTACAGATTGTATGTGGTTTTCATGCTCTTCCTCTTCCCGAACGAGGAAGTGAGTTAGTTTTCCAACCTCTTGAACATCTACAGGAAATCCAGTATAATCGACCTCCAATTGCTGCCCTTGGTTTTGACGAAAAAAATTTAGATTCATTTGAAGATCCTGGGGTTGATGCAAAGTTGGCTGCTGCTGAGGAAGCACTTTCACTATCACTGTGGACAACTGCTACAATTTGCCGAGTTCTCTCTGTTGAAAGTATTTTGTCATTGGTTGCGGGAGTACTACTGGAAAAGCAAGTGATATTAGTATGCCCTAATCTGGGTGTTCTATCAGCTACAGTGTTATCTCTCATACCCATGATTCGTCCATTTCAATGGCAGAGTTTAATGCTTCCTGTTCTACCAGGGAAAATGCTGGATTTTCTTGATGCCCCAGTTCCCTTCATTATTGGGATAGAACAAGTTCCTGCAGATCTAAGGAAGAAAACATCAGATCCTGTCGTAGTTAACATGCTCATGGATCAGGTGAAACTGCCTCATCACTTGCCAACATTACCACGATATAGAGATCTTGCCCTTGAACTCGCGCCAATCCATTCTAAACTGTCACTCGAAGGTTCATTTGCTAAAAAGCATCCTGTATATAGGTGCAACGAAGTGCAGGCTGAAGCTGCAGCCCAGTTTTTGAAAGTCATGAAGAACTACATTGAGTCACTTTGTTCAGAGCTAAGGTCTTACACCATAACAAGTGTACAGTCAAATAATGACAGGGTTTCGTTACTTCTCAAAGATAGCTTCATTGATTCCTTTCCTAGCAAGGACCGGTCATTTATCAAGTTGTTGGTAGACACACAAATGTTCACAGTTCTATCCGACTCTCGTCTGTCAAGCTTAGAGAATGGCAACCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DENN dDENN uDENN

Protein Analysis

801

Amino Acids

89.46

Weight (kDa)

5.16

Isoelectric Point (pI)

49.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
uDENN	PF03456	183 - 260	3.9e-06	uDENN domain
DENN	PF02141	575 - 668	6.9e-22	DENN (AEX-3) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20320 AT2G20320
fragaria_vesca	FvH4_2g20280
malus_domestica	MD05G1186700.v1.1 MD10G1174800.v1.1
prunus_persica	Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1
pyrus_communis	pycom05g17090 pycom10g15050
rosa_chinensis	RchiOBHm_Chr6g0286081
rosa_laevigata	RLG00000012584
rosa_multiflora	Rmu_sc0023663.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182470
rosa_rugosa	Rorug06G0178800
rosa_samantha	Rh3BG272300 Rh6AG291200 Rh6BG294500 Rh6CG294100 Rh6DG286100
rosa_wichuraiana	Rw6G025090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	398
AccB1I	GGYRCC	1 cut(s)	151
AccI	GTMKAC	1 cut(s)	2340
AccII	CGCG	2 cut(s)	1356, 2081
AciI	CCGC	4 cut(s)	143, 172, 404, 1769
AclWI	GGATC	3 cut(s)	1649, 1982, 2022
AcoI	YGGCCR	2 cut(s)	126, 1342
AcsI	RAATTY	2 cut(s)	1090, 1636
AcuI	CTGAAG	4 cut(s)	60, 867, 1296, 2181
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	5 cut(s)	555, 1126, 1245, 1776, 2247
AfiI	CCNNNNNNNGG	7 cut(s)	73, 161, 204, 865, 1544, 1813, 1814
AflIII	ACRYGT	1 cut(s)	778
AgeI	ACCGGT	1 cut(s)	2316
AjnI	CCWGG	4 cut(s)	571, 622, 1657, 1897
AleI	CACNNNNGTG	1 cut(s)	880
Alw26I	GTCTC	3 cut(s)	464, 1058, 1154
AlwI	GGATC	3 cut(s)	1649, 1982, 2022
AlwNI	CAGNNNCTG	1 cut(s)	1991
AoxI	GGCC	3 cut(s)	126, 800, 1342
ApeKI	GCWGC	8 cut(s)	443, 514, 1136, 1613, 1679, 1682, 2165, 2168
ApoI	RAATTY	2 cut(s)	1090, 1636
AseI	ATTAAT	1 cut(s)	644
AsiGI	ACCGGT	1 cut(s)	2316
Asp700I	GAANNNNTTC	3 cut(s)	792, 1273, 1956
AspLEI	GCGC	3 cut(s)	210, 960, 2083
AspS9I	GGNCC	4 cut(s)	174, 264, 524, 2314
AsuC2I	CCSGG	3 cut(s)	156, 280, 1202
AsuHPI	GGTGA	2 cut(s)	819, 2032
AsuNHI	GCTAGC	1 cut(s)	583
AvaII	GGWCC	4 cut(s)	174, 264, 524, 2314
AxyI	CCTNAGG	2 cut(s)	297, 549
BalI	TGGCCA	2 cut(s)	128, 1344
BanI	GGYRCC	1 cut(s)	151
BbsI	GAAGAC	1 cut(s)	659
BbvCI	CCTCAGC	1 cut(s)	1686
BbvI	GCAGC	8 cut(s)	455, 526, 1123, 1600, 1666, 1669, 2152, 2180
BccI	CCATC	3 cut(s)	252, 459, 667
BciT130I	CCWGG	4 cut(s)	573, 624, 1659, 1899
BcnI	CCSGG	3 cut(s)	156, 280, 1202
BcoDI	GTCTC	3 cut(s)	464, 1058, 1154
BfaI	CTAG	5 cut(s)	584, 1218, 1395, 1479, 2307
BfmI	CTRYAG	7 cut(s)	512, 1137, 1502, 1580, 1830, 1962, 2166
BfoI	RGCGCY	1 cut(s)	961
BglII	AGATCT	2 cut(s)	1966, 2062
BisI	GCNGC	9 cut(s)	143, 444, 515, 1137, 1614, 1680, 1683, 2166, 2169
BlsI	GCNGC	9 cut(s)	144, 445, 516, 1138, 1615, 1681, 1684, 2167, 2170
BmcAI	AGTACT	1 cut(s)	1776
Bme1390I	CCNGG	7 cut(s)	156, 280, 573, 624, 1202, 1659, 1899
Bme18I	GGWCC	4 cut(s)	174, 264, 524, 2314
BmgT120I	GGNCC	4 cut(s)	174, 264, 524, 2314
BmiI	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
BmrFI	CCNGG	7 cut(s)	156, 280, 573, 624, 1202, 1659, 1899
BmrI	ACTGGG	2 cut(s)	1922, 2167
BmsI	GCATC	6 cut(s)	13, 25, 828, 1657, 1912, 2137
BmtI	GCTAGC	1 cut(s)	587
BmuI	ACTGGG	2 cut(s)	1922, 2167
BoxI	GACNNNNGTC	1 cut(s)	2373
BpiI	GAAGAC	1 cut(s)	659
BpmI	CTGGAG	4 cut(s)	513, 555, 645, 1212
Bpu10I	CCTNAGC	2 cut(s)	1686, 2222
BpuEI	CTTGAG	2 cut(s)	722, 1163
BpuMI	CCSGG	3 cut(s)	156, 280, 1202
BsaBI	GATNNNNATC	1 cut(s)	423
BsaJI	CCNNGG	8 cut(s)	155, 438, 572, 878, 1200, 1618, 1658, 1898
BsaWI	WCCGGW	1 cut(s)	2316
Bsc4I	CCNNNNNNNGG	7 cut(s)	73, 161, 204, 865, 1544, 1813, 1814
Bse118I	RCCGGY	1 cut(s)	2316
Bse1I	ACTGG	6 cut(s)	129, 322, 1591, 1785, 1928, 2173
Bse21I	CCTNAGG	2 cut(s)	297, 549
Bse3DI	GCAATG	1 cut(s)	594
Bse8I	GATNNNNATC	1 cut(s)	423
BseBI	CCWGG	4 cut(s)	573, 624, 1659, 1899
BseDI	CCNNGG	8 cut(s)	155, 438, 572, 878, 1200, 1618, 1658, 1898
BseGI	GGATG	6 cut(s)	28, 412, 1092, 1267, 1417, 2128
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	7 cut(s)	73, 161, 204, 865, 1544, 1813, 1814
BseMI	GCAATG	1 cut(s)	594
BseMII	CTCAG	8 cut(s)	75, 288, 563, 851, 953, 1053, 1317, 1677
BseNI	ACTGG	6 cut(s)	129, 322, 1591, 1785, 1928, 2173
BseRI	GAGGAG	2 cut(s)	101, 1067
BseXI	GCAGC	8 cut(s)	455, 526, 1123, 1600, 1666, 1669, 2152, 2180
BsgI	GTGCAG	2 cut(s)	858, 2174
Bsh1236I	CGCG	2 cut(s)	1356, 2081
BshFI	GGCC	3 cut(s)	128, 802, 1344
BshNI	GGYRCC	1 cut(s)	151
BshTI	ACCGGT	1 cut(s)	2316
BsiSI	CCGG	4 cut(s)	155, 280, 1202, 2317
BslFI	GGGAC	6 cut(s)	49, 277, 537, 995, 1042, 1183
BslI	CCNNNNNNNGG	7 cut(s)	73, 161, 204, 865, 1544, 1813, 1814
BsmAI	GTCTC	3 cut(s)	464, 1058, 1154
BsmBI	CGTCTC	1 cut(s)	464
BsmFI	GGGAC	6 cut(s)	49, 277, 537, 995, 1042, 1183
BsmI	GAATGC	1 cut(s)	446
BsnI	GGCC	3 cut(s)	128, 802, 1344
Bsp1407I	TGTACA	1 cut(s)	2245
Bsp143I	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
BspACI	CCGC	4 cut(s)	143, 172, 404, 1769
BspANI	GGCC	3 cut(s)	128, 802, 1344
BspCNI	CTCAG	8 cut(s)	76, 289, 562, 850, 954, 1054, 1316, 1678
BspFNI	CGCG	2 cut(s)	1356, 2081
BspHI	TCATGA	2 cut(s)	271, 2187
BspLI	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
BspMAI	CTGCAG	4 cut(s)	516, 1141, 1966, 2170
BspOI	GCTAGC	1 cut(s)	587
BspPI	GGATC	3 cut(s)	1649, 1982, 2022
BspQI	GCTCTTC	1 cut(s)	1533
BspT107I	GGYRCC	1 cut(s)	151
BsrDI	GCAATG	1 cut(s)	594
BsrFI	RCCGGY	1 cut(s)	2316
BsrGI	TGTACA	1 cut(s)	2245
BsrI	ACTGG	6 cut(s)	129, 322, 1591, 1785, 1928, 2173
BssAI	RCCGGY	1 cut(s)	2316
BssECI	CCNNGG	8 cut(s)	155, 438, 572, 878, 1200, 1618, 1658, 1898
BssMI	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
BssT1I	CCWWGG	1 cut(s)	1618
Bst2UI	CCWGG	4 cut(s)	573, 624, 1659, 1899
Bst6I	CTCTTC	5 cut(s)	572, 837, 860, 1533, 1539
BstAPI	GCANNNNNTGC	1 cut(s)	752
BstAUI	TGTACA	1 cut(s)	2245
BstC8I	GCNNGC	4 cut(s)	94, 285, 585, 2157
BstF5I	GGATG	6 cut(s)	28, 412, 1092, 1267, 1417, 2128
BstFNI	CGCG	2 cut(s)	1356, 2081
BstH2I	RGCGCY	1 cut(s)	961
BstHHI	GCGC	3 cut(s)	210, 960, 2083
BstKTI	GATC	5 cut(s)	1657, 1969, 1990, 2017, 2065
BstMAI	GTCTC	3 cut(s)	464, 1058, 1154
BstMBI	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
BstNI	CCWGG	4 cut(s)	573, 624, 1659, 1899
BstNSI	RCATGY	4 cut(s)	96, 782, 1405, 2008
BstPAI	GACNNNNGTC	1 cut(s)	2373
BstSCI	CCNGG	7 cut(s)	154, 278, 571, 622, 1200, 1657, 1897
BstSFI	CTRYAG	7 cut(s)	512, 1137, 1502, 1580, 1830, 1962, 2166
BstUI	CGCG	2 cut(s)	1356, 2081
BstV1I	GCAGC	8 cut(s)	455, 526, 1123, 1600, 1666, 1669, 2152, 2180
BstV2I	GAAGAC	1 cut(s)	659
BstX2I	RGATCY	4 cut(s)	1654, 1966, 1987, 2062
BstXI	CCANNNNNNTGG	2 cut(s)	124, 1869
BstYI	RGATCY	4 cut(s)	1654, 1966, 1987, 2062
Bsu36I	CCTNAGG	2 cut(s)	297, 549
BsuRI	GGCC	3 cut(s)	128, 802, 1344
BtgZI	GCGATG	1 cut(s)	1470
BtsCI	GGATG	6 cut(s)	28, 412, 1092, 1267, 1417, 2128
BtsIMutI	CAGTG	5 cut(s)	105, 329, 1117, 1706, 1839
Cac8I	GCNNGC	4 cut(s)	94, 285, 585, 2157
CaiI	CAGNNNCTG	1 cut(s)	1991
CciI	TCATGA	2 cut(s)	271, 2187
CfoI	GCGC	3 cut(s)	210, 960, 2083
Cfr10I	RCCGGY	1 cut(s)	2316
Cfr13I	GGNCC	4 cut(s)	174, 264, 524, 2314
Csp6I	GTAC	5 cut(s)	554, 1125, 1244, 1775, 2246
CspAI	ACCGGT	1 cut(s)	2316
CviQI	GTAC	5 cut(s)	554, 1125, 1244, 1775, 2246
DpnI	GATC	5 cut(s)	1656, 1968, 1989, 2016, 2064
DpnII	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
DraI	TTTAAA	1 cut(s)	562
DraIII	CACNNNGTG	1 cut(s)	668
EaeI	YGGCCR	2 cut(s)	126, 1342
Eam1104I	CTCTTC	5 cut(s)	572, 837, 860, 1533, 1539
EarI	CTCTTC	5 cut(s)	572, 837, 860, 1533, 1539
EciI	GGCGGA	1 cut(s)	187
Eco130I	CCWWGG	1 cut(s)	1618
Eco147I	AGGCCT	1 cut(s)	802
Eco47I	GGWCC	4 cut(s)	174, 264, 524, 2314
Eco57I	CTGAAG	4 cut(s)	60, 867, 1296, 2181
Eco81I	CCTNAGG	2 cut(s)	297, 549
EcoO109I	RGGNCCY	1 cut(s)	524
EcoRI	GAATTC	1 cut(s)	1090
EcoRII	CCWGG	4 cut(s)	571, 622, 1657, 1897
EcoT14I	CCWWGG	1 cut(s)	1618
ErhI	CCWWGG	1 cut(s)	1618
Esp3I	CGTCTC	1 cut(s)	464
FaqI	GGGAC	6 cut(s)	49, 277, 537, 995, 1042, 1183
FauI	CCCGC	2 cut(s)	397, 1762
FblI	GTMKAC	1 cut(s)	2340
Fnu4HI	GCNGC	9 cut(s)	143, 444, 515, 1137, 1614, 1680, 1683, 2166, 2169
FokI	GGATG	6 cut(s)	35, 399, 1099, 1274, 1424, 2115
Fsp4HI	GCNGC	9 cut(s)	143, 444, 515, 1137, 1614, 1680, 1683, 2166, 2169
FspBI	CTAG	5 cut(s)	584, 1218, 1395, 1479, 2307
GlaI	GCGC	3 cut(s)	209, 959, 2082
GluI	GCNGC	9 cut(s)	143, 444, 515, 1137, 1614, 1680, 1683, 2166, 2169
GsuI	CTGGAG	4 cut(s)	513, 555, 645, 1212
HaeII	RGCGCY	1 cut(s)	961
HaeIII	GGCC	3 cut(s)	128, 802, 1344
HapII	CCGG	4 cut(s)	155, 280, 1202, 2317
HhaI	GCGC	3 cut(s)	210, 960, 2083
Hin6I	GCGC	3 cut(s)	208, 958, 2081
HinP1I	GCGC	3 cut(s)	208, 958, 2081
HincII	GTYRAC	2 cut(s)	1108, 2002
HindII	GTYRAC	2 cut(s)	1108, 2002
HindIII	AAGCTT	1 cut(s)	2383
HpaI	GTTAAC	1 cut(s)	2002
HpaII	CCGG	4 cut(s)	155, 280, 1202, 2317
HphI	GGTGA	2 cut(s)	819, 2032
Hpy166II	GTNNAC	6 cut(s)	1108, 1713, 2002, 2246, 2341, 2355
Hpy8I	GTNNAC	6 cut(s)	1108, 1713, 2002, 2246, 2341, 2355
HpyAV	CCTTC	8 cut(s)	35, 47, 241, 514, 842, 1023, 1945, 2102
HspAI	GCGC	3 cut(s)	208, 958, 2081
KspAI	GTTAAC	1 cut(s)	2002
Kzo9I	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
LguI	GCTCTTC	1 cut(s)	1533
LmnI	GCTCC	4 cut(s)	370, 697, 955, 1231
Lsp1109I	GCAGC	8 cut(s)	455, 526, 1123, 1600, 1666, 1669, 2152, 2180
LweI	GCATC	6 cut(s)	13, 25, 828, 1657, 1912, 2137
MaeI	CTAG	5 cut(s)	584, 1218, 1395, 1479, 2307
MaeIII	GTNAC	6 cut(s)	668, 918, 1331, 2100, 2205, 2271
MalI	GATC	5 cut(s)	1656, 1968, 1989, 2016, 2064
MboI	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
MfeI	CAATTG	1 cut(s)	1608
MflI	RGATCY	4 cut(s)	1654, 1966, 1987, 2062
MlsI	TGGCCA	2 cut(s)	128, 1344
MluNI	TGGCCA	2 cut(s)	128, 1344
MlyI	GAGTC	7 cut(s)	649, 846, 1064, 1079, 1369, 2213, 2363
MmeI	TCCRAC	3 cut(s)	765, 1588, 2391
Mox20I	TGGCCA	2 cut(s)	128, 1344
MroXI	GAANNNNTTC	3 cut(s)	792, 1273, 1956
MscI	TGGCCA	2 cut(s)	128, 1344
MslI	CAYNNNNRTG	6 cut(s)	880, 1338, 1850, 1867, 2009, 2348
Msp20I	TGGCCA	2 cut(s)	128, 1344
MspA1I	CMGCKG	1 cut(s)	1130
MspI	CCGG	4 cut(s)	155, 280, 1202, 2317
MspR9I	CCNGG	7 cut(s)	156, 280, 573, 624, 1202, 1659, 1899
MunI	CAATTG	1 cut(s)	1608
Mva1269I	GAATGC	1 cut(s)	446
MvaI	CCWGG	4 cut(s)	573, 624, 1659, 1899
MvnI	CGCG	2 cut(s)	1356, 2081
NciI	CCSGG	3 cut(s)	156, 280, 1202
NdeII	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
NheI	GCTAGC	1 cut(s)	583
NlaIV	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
NmeAIII	GCCGAG	2 cut(s)	463, 1757
NmuCI	GTSAC	4 cut(s)	668, 1331, 2100, 2205
NspI	RCATGY	4 cut(s)	96, 782, 1405, 2008
OliI	CACNNNNGTG	1 cut(s)	880
PaeI	GCATGC	1 cut(s)	96
PagI	TCATGA	2 cut(s)	271, 2187
PceI	AGGCCT	1 cut(s)	802
PciI	ACATGT	1 cut(s)	778
PciSI	GCTCTTC	1 cut(s)	1533
PctI	GAATGC	1 cut(s)	446
PdmI	GAANNNNTTC	3 cut(s)	792, 1273, 1956
PfeI	GAWTC	6 cut(s)	275, 1274, 1376, 1643, 1855, 2297
PflFI	GACNNNGTC	2 cut(s)	1007, 1069
PfoI	TCCNGGA	1 cut(s)	622
PinAI	ACCGGT	1 cut(s)	2316
PkrI	GCNGC	9 cut(s)	144, 445, 516, 1138, 1615, 1681, 1684, 2167, 2170
PleI	GAGTC	7 cut(s)	649, 846, 1063, 1078, 1368, 2212, 2363
PpsI	GAGTC	7 cut(s)	649, 846, 1063, 1078, 1368, 2212, 2363
PpuMI	RGGWCCY	1 cut(s)	524
PscI	ACATGT	1 cut(s)	778
PshAI	GACNNNNGTC	1 cut(s)	2373
PshBI	ATTAAT	1 cut(s)	644
PsiI	TTATAA	1 cut(s)	398
Psp5II	RGGWCCY	1 cut(s)	524
Psp6I	CCWGG	4 cut(s)	571, 622, 1657, 1897
PspGI	CCWGG	4 cut(s)	571, 622, 1657, 1897
PspN4I	GGNNCC	8 cut(s)	153, 176, 265, 372, 525, 1191, 1227, 1300
PspPI	GGNCC	4 cut(s)	174, 264, 524, 2314
PspPPI	RGGWCCY	1 cut(s)	524
PsrI	GAACNNNNNNTAC	2 cut(s)	537, 569
PstI	CTGCAG	4 cut(s)	516, 1141, 1966, 2170
PstNI	CAGNNNCTG	1 cut(s)	1991
PsuI	RGATCY	4 cut(s)	1654, 1966, 1987, 2062
PsyI	GACNNNGTC	2 cut(s)	1007, 1069
PvuII	CAGCTG	1 cut(s)	1130
RsaI	GTAC	5 cut(s)	555, 1126, 1245, 1776, 2247
RsaNI	GTAC	5 cut(s)	554, 1125, 1244, 1775, 2246
RseI	CAYNNNNRTG	6 cut(s)	880, 1338, 1850, 1867, 2009, 2348
SapI	GCTCTTC	1 cut(s)	1533
SatI	GCNGC	9 cut(s)	143, 444, 515, 1137, 1614, 1680, 1683, 2166, 2169
Sau3AI	GATC	5 cut(s)	1654, 1966, 1987, 2014, 2062
Sau96I	GGNCC	4 cut(s)	174, 264, 524, 2314
ScaI	AGTACT	1 cut(s)	1776
SchI	GAGTC	7 cut(s)	649, 846, 1064, 1079, 1369, 2213, 2363
ScrFI	CCNGG	7 cut(s)	156, 280, 573, 624, 1202, 1659, 1899
SfaNI	GCATC	6 cut(s)	13, 25, 828, 1657, 1912, 2137
SfcI	CTRYAG	7 cut(s)	512, 1137, 1502, 1580, 1830, 1962, 2166
SinI	GGWCC	4 cut(s)	174, 264, 524, 2314
SmiMI	CAYNNNNRTG	6 cut(s)	880, 1338, 1850, 1867, 2009, 2348
SmlI	CTYRAG	2 cut(s)	737, 1178
SmoI	CTYRAG	2 cut(s)	737, 1178
SphI	GCATGC	1 cut(s)	96
SseBI	AGGCCT	1 cut(s)	802
SsiI	CCGC	4 cut(s)	143, 172, 404, 1769
SspI	AATATT	1 cut(s)	540
SspMI	CTAG	5 cut(s)	584, 1218, 1395, 1479, 2307
StuI	AGGCCT	1 cut(s)	802
StyD4I	CCNGG	7 cut(s)	154, 278, 571, 622, 1200, 1657, 1897
StyI	CCWWGG	1 cut(s)	1618
TaqI	TCGA	3 cut(s)	1166, 1600, 2106
TatI	WGTACW	2 cut(s)	1774, 2245
TauI	GCSGC	1 cut(s)	145
TfiI	GAWTC	6 cut(s)	275, 1274, 1376, 1643, 1855, 2297
TscAI	CASTG	5 cut(s)	105, 329, 1117, 1713, 1839
TseFI	GTSAC	4 cut(s)	668, 1331, 2100, 2205
TseI	GCWGC	8 cut(s)	443, 514, 1136, 1613, 1679, 1682, 2165, 2168
Tsp45I	GTSAC	4 cut(s)	668, 1331, 2100, 2205
TspGWI	ACGGA	2 cut(s)	488, 848
TspRI	CASTG	5 cut(s)	105, 329, 1117, 1713, 1839
Tth111I	GACNNNGTC	2 cut(s)	1007, 1069
VpaK11BI	GGWCC	4 cut(s)	174, 264, 524, 2314
VspI	ATTAAT	1 cut(s)	644
XapI	RAATTY	2 cut(s)	1090, 1636
XceI	RCATGY	4 cut(s)	96, 782, 1405, 2008
XmiI	GTMKAC	1 cut(s)	2340
XmnI	GAANNNNTTC	3 cut(s)	792, 1273, 1956
XspI	CTAG	5 cut(s)	584, 1218, 1395, 1479, 2307
ZrmI	AGTACT	1 cut(s)	1776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.