Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0006052

Physical Location & Seq

Genomic Coordinates Forward (+)

26715487 .. 26723634

Gene Structure 8148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1174800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGAGGGTAAAGAAGATGGTGAAGCATACGAAGAGCGGCCTCCGTCGCCTGCTCAGGTTTTGCAGGAAATATCTGAGGGGGCATTTAAAGTGGCAGGGGAAACACTGCAAAATGTGGTCTCAGGTAAATCGAGCATGCCACCACTGGCACCGGGGCATACGCGCTCCCAAAGTGAAGTTGTAACTACGACACACAGACGGAGCAATAGCTTTCAAAAATTGAAAACTCAGATGCAGAAGGCTTGGAGATGGGGTGGAAGTTCGCGGGATGGTTTGCGGTTGTCTTTCAATCCTGAGGTTTTGGCAAACCAAAAACGCCAGTGGTATCAGCGTTACTCCAAATCAAAGGGCCATATAAAATATACCGAGCCAACTTCACTCTTTGAGCATTTTATTATTGCGGGGCTTCATCCTGATGCTAACCTTGACACTGCGGAGGATGCATTTGTTAAAAGAAAGAAATGGGAGATGGAGATGATAAATTGCGGAATTGTTGACCTTAAATTGCTACAGCAGCGGGGACCTCCAATTCCTACATTAGAACCTCAGATACTTTTTAAATATCCTCCTGGGAAGCGGTTTGATATGCGTTTGACAGATTTAGCTTCCTTTTGTTTTCCTGGAGGGGTTAAGGCACGGTTATTGGAGAAGACTCCGTCACTAAGTGATTTAAATCAAGTTGTTTATGGACAGGAGCATTTAGGCAAAGATGATTTATCATTTATTTTCTCACTCAAGGTGGCAGACAATGCAACACTTTATGGTGTTTGCCTGCACGTGTCAGAAATTGTTCAGAGGCCTCCTGCTATCTTAGGCATCTCATCACCTAATTCTCATTCGACAGGAGGACTCTTCCGCTTTTTGGTTTCTGCACCTCGATGCTACTGTGTGCTATCCAGAGTTCCTTTTTTTGAGTTACATTACGAGATGCTGAATAGTATCATTCAACAGGAGCGTCTGAAGCGAATAACACAATTTGCTAGTGAAATGGCCCTCAATGATTTTGTCCCTACATTGCCCAAAGTACAAGATTATGATAATGAGTCCCCTGAGAGGGAGTCTTTTGATAATTGGATGGACTCCGCAATACCAGTGAACAGTTCAATTGCACTTACAGTTGCTGGTGCAGGAATCAGACCGGAGGATGAGACTCCACCTTCTTCACTCAAGATATGGGAACTGCAGTCCCCTGAAAGTGTTTCTGCTAGCGAAAGTTCAGATTTTTGTCAAGTACGGTATTTAGACAAAGATGGTAGAAGGGATTCACAATGTTCTGATGACTATGGTTTTGAGGCCTCTGAAACTCGTTCAGAGGCTTCAGAAAGAATATGCGCAATCTATGGAAATGACCATACTTCTCCAGAGGTTGGGACATCTTTCTCCACCAGGAATCGCACATTGGAGCGTCTTGGCAGTTCTGAATCTCTATTCAGGTGTCCAGCTAGAAGCATGGTATCGGAGGATGAAGATGATGACCTTTCCTCAACGTGTGAGAAAGAGTTTGGTGATGAACTAATAATGGAATGGGCTAGGGAGAACAAGAACGATTTATTACAGATTCTTTGTGGTTTTCATGCTTTGCCTCTCCCGCAACGAGGAAGTGAGTTTTCTTTTCAACCTCTTGAACACCTACAAGCTACTGAGTATAGGAGACCTTCAGTTGCTGCTCTTGGTTTTGATGAGAATAGTGTTGATTCATTTGAAGATCCTGGGGTCAATGTTATGTTAGCTGCTGCTGAGGAAGCGCTTGCACTATCAATATGGACAACTGCAACAATTTGCCGAGTTCTCTCCCTTGAAAGTATTTTGTCATTGCTTACGGGAGTATTACTAGAAAAACAAGTGGTGGTAGTGTGTCCGAATCTGGGTGTGCTATCAGCTACAGTATTGTCTCTCATTCCCATGATTCGTCCATTTCAATGGCAGAGTTTAATGCTTCCTGTTCTACCAGGGAAAATACTTGATTTTCTTGACGCCCCAGTTCCATTTATTATTGGGATACAACAGGTTCCTGCAGACCTGAAGAGGAAAACGTCGGATCCTGTTCAAGTTAATGTGCAAAAGGATCAGGTGAAAATGTGTCATTTGCCGTCACTTCCAGGACATAAAGATCTAGCCACTGAATTAGGGCCCATCCATGCTAGACTGTCGCGTGAAGGTTCATTTGCTCAAAAGCATCCTGTATATAGGTGCAACGAAGTGCAGATCGAAGCTGCAGGCCAGTTTTTGGAAGTCATGAAGAACTACGCGGAATCACTTTGTTCAGATCTAAGGTCTTACACAATAACAAGTGTACAATCAAACAGTGACAGGGTTTCTTTACTTCTTAAAGATAGCTTTATCGATTCCTTTCCGAGCAAGGACAGACAATTTATGAAGTTATTTGTGGACACACAGATGTTCACTGTTCTAACTGACTCTCGTTTGTCAAGCTTCGAGAATGGTGACCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DENN dDENN uDENN

Protein Analysis

818

Amino Acids

91.44

Weight (kDa)

5.24

Isoelectric Point (pI)

48.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
uDENN	PF03456	182 - 259	6.5e-07	uDENN domain
DENN	PF02141	592 - 686	1.7e-20	DENN (AEX-3) domain
dDENN	PF03455	777 - 811	8.3e-07	dDENN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20320 AT2G20320
fragaria_vesca	FvH4_2g20280
malus_domestica	MD05G1186700.v1.1 MD10G1174800.v1.1
prunus_persica	Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1
pyrus_communis	pycom05g17090 pycom10g15050
rosa_chinensis	RchiOBHm_Chr6g0286081
rosa_laevigata	RLG00000012584
rosa_multiflora	Rmu_sc0023663.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182470
rosa_rugosa	Rorug06G0178800
rosa_samantha	Rh3BG272300 Rh6AG291200 Rh6BG294500 Rh6CG294100 Rh6DG286100
rosa_wichuraiana	Rw6G025090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1333
AccB1I	GGYRCC	1 cut(s)	148
AccB7I	CCANNNNNTGG	2 cut(s)	1367, 2227
AccBSI	CCGCTC	1 cut(s)	37
AccII	CGCG	4 cut(s)	163, 265, 2152, 2249
AclWI	GGATC	4 cut(s)	1700, 2033, 2046, 2073
AcuI	CTGAAG	4 cut(s)	980, 1302, 1641, 2042
AcvI	CACGTG	1 cut(s)	778
AcyI	GRCGYC	1 cut(s)	1974
AdeI	CACNNNGTG	1 cut(s)	665
AfaI	GTAC	3 cut(s)	1026, 1233, 2295
AfeI	AGCGCT	1 cut(s)	1746
AfiI	CCNNNNNNNGG	7 cut(s)	862, 1053, 1054, 1367, 1595, 1865, 2227
AflIII	ACRYGT	2 cut(s)	777, 1487
AjnI	CCWGG	6 cut(s)	568, 619, 1385, 1708, 1948, 2098
AjuI	GAANNNNNNNTTGG	2 cut(s)	1382, 1414
AluBI	AGCT	9 cut(s)	210, 605, 1442, 1637, 1730, 1880, 2213, 2337, 2433
AluI	AGCT	9 cut(s)	210, 605, 1442, 1637, 1730, 1880, 2213, 2337, 2433
Alw26I	GTCTC	4 cut(s)	124, 1142, 1645, 1896
AlwI	GGATC	4 cut(s)	1700, 2033, 2046, 2073
AlwNI	CAGNNNCTG	2 cut(s)	1121, 1664
Aor51HI	AGCGCT	1 cut(s)	1746
AoxI	GGCC	7 cut(s)	38, 349, 797, 990, 1293, 2129, 2218
ApaI	GGGCCC	1 cut(s)	2133
ApeKI	GCWGC	5 cut(s)	514, 1664, 1730, 1733, 2213
ArsI	GACNNNNNNTTYG	2 cut(s)	1271, 1303
Asp700I	GAANNNNTTC	2 cut(s)	789, 1261
AspLEI	GCGC	3 cut(s)	165, 1334, 1747
AspS9I	GGNCC	5 cut(s)	349, 521, 991, 2129, 2130
AsuC2I	CCSGG	1 cut(s)	153
AsuHPI	GGTGA	4 cut(s)	32, 816, 1517, 2083
AsuNHI	GCTAGC	1 cut(s)	1205
AvaII	GGWCC	1 cut(s)	521
AxyI	CCTNAGG	1 cut(s)	294
BaeGI	GKGCMC	1 cut(s)	2133
BamHI	GGATCC	1 cut(s)	2038
BanI	GGYRCC	1 cut(s)	148
BanII	GRGCYC	1 cut(s)	2133
BbrPI	CACGTG	1 cut(s)	778
BbsI	GAAGAC	1 cut(s)	656
BbvCI	CCTCAGC	1 cut(s)	1737
BbvI	GCAGC	5 cut(s)	526, 1651, 1717, 1720, 2200
BccI	CCATC	7 cut(s)	11, 243, 263, 463, 1069, 1244, 2141
BceAI	ACGGC	1 cut(s)	2074
BciT130I	CCWGG	6 cut(s)	570, 621, 1387, 1710, 1950, 2100
BciVI	GTATCC	1 cut(s)	1992
BcnI	CCSGG	1 cut(s)	153
BcoDI	GTCTC	4 cut(s)	124, 1142, 1645, 1896
BfaI	CTAG	7 cut(s)	981, 1206, 1443, 1530, 1832, 2114, 2142
BfmI	CTRYAG	5 cut(s)	509, 1181, 1881, 2013, 2214
BfoI	RGCGCY	1 cut(s)	1748
BfuI	GTATCC	1 cut(s)	1992
BglII	AGATCT	2 cut(s)	2110, 2266
BisI	GCNGC	6 cut(s)	38, 515, 1665, 1731, 1734, 2214
BlsI	GCNGC	6 cut(s)	39, 516, 1666, 1732, 1735, 2215
Bme1390I	CCNGG	7 cut(s)	153, 570, 621, 1387, 1710, 1950, 2100
Bme18I	GGWCC	1 cut(s)	521
BmgT120I	GGNCC	5 cut(s)	349, 521, 991, 2129, 2130
BmiI	GGNNCC	5 cut(s)	150, 522, 2010, 2040, 2131
BmrFI	CCNGG	7 cut(s)	153, 570, 621, 1387, 1710, 1950, 2100
BmrI	ACTGGG	1 cut(s)	1973
BmsI	GCATC	7 cut(s)	222, 406, 430, 825, 869, 918, 2185
BmtI	GCTAGC	1 cut(s)	1209
BmuI	ACTGGG	1 cut(s)	1973
BpiI	GAAGAC	1 cut(s)	656
BpmI	CTGGAG	2 cut(s)	642, 1344
Bpu10I	CCTNAGC	2 cut(s)	54, 1737
BpuEI	CTTGAG	2 cut(s)	719, 1151
BpuMI	CCSGG	1 cut(s)	153
Bsa29I	ATCGAT	1 cut(s)	2343
BsaAI	YACGTR	1 cut(s)	778
BsaBI	GATNNNNATC	1 cut(s)	672
BsaHI	GRCGYC	1 cut(s)	1974
BsaI	GGTCTC	2 cut(s)	124, 1645
BsaJI	CCNNGG	4 cut(s)	152, 569, 1709, 1949
BsaWI	WCCGGW	1 cut(s)	1138
BsaXI	ACNNNNNCTCC	2 cut(s)	238, 268
Bsc4I	CCNNNNNNNGG	7 cut(s)	862, 1053, 1054, 1367, 1595, 1865, 2227
Bse1I	ACTGG	5 cut(s)	150, 319, 1091, 1979, 2221
Bse21I	CCTNAGG	1 cut(s)	294
Bse3DI	GCAATG	2 cut(s)	1013, 1811
Bse8I	GATNNNNATC	1 cut(s)	672
BseBI	CCWGG	6 cut(s)	570, 621, 1387, 1710, 1950, 2100
BseCI	ATCGAT	1 cut(s)	2343
BseDI	CCNNGG	4 cut(s)	152, 569, 1709, 1949
BseGI	GGATG	8 cut(s)	274, 409, 445, 1080, 1150, 1468, 2133, 2176
BseJI	GATNNNNATC	1 cut(s)	672
BseLI	CCNNNNNNNGG	7 cut(s)	862, 1053, 1054, 1367, 1595, 1865, 2227
BseMI	GCAATG	2 cut(s)	1013, 1811
BseMII	CTCAG	9 cut(s)	66, 68, 135, 242, 285, 560, 1041, 1632, 1728
BseNI	ACTGG	5 cut(s)	150, 319, 1091, 1979, 2221
BseSI	GKGCMC	1 cut(s)	2133
BseXI	GCAGC	5 cut(s)	526, 1651, 1717, 1720, 2200
BsgI	GTGCAG	4 cut(s)	758, 855, 1146, 2222
Bsh1236I	CGCG	4 cut(s)	163, 265, 2152, 2249
BshFI	GGCC	7 cut(s)	40, 351, 799, 992, 1295, 2131, 2220
BshNI	GGYRCC	1 cut(s)	148
BshVI	ATCGAT	1 cut(s)	2343
BsiSI	CCGG	2 cut(s)	152, 1139
BslFI	GGGAC	5 cut(s)	534, 992, 1030, 1171, 1384
BslI	CCNNNNNNNGG	7 cut(s)	862, 1053, 1054, 1367, 1595, 1865, 2227
BsmAI	GTCTC	4 cut(s)	124, 1142, 1645, 1896
BsmFI	GGGAC	5 cut(s)	534, 992, 1030, 1171, 1384
BsnI	GGCC	7 cut(s)	40, 351, 799, 992, 1295, 2131, 2220
Bso31I	GGTCTC	2 cut(s)	124, 1645
Bsp120I	GGGCCC	1 cut(s)	2129
Bsp1286I	GDGCHC	1 cut(s)	2133
Bsp1407I	TGTACA	1 cut(s)	2293
Bsp143I	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
BspANI	GGCC	7 cut(s)	40, 351, 799, 992, 1295, 2131, 2220
BspCNI	CTCAG	9 cut(s)	67, 67, 134, 241, 286, 559, 1042, 1633, 1729
BspDI	ATCGAT	1 cut(s)	2343
BspFNI	CGCG	4 cut(s)	163, 265, 2152, 2249
BspHI	TCATGA	1 cut(s)	2235
BspLI	GGNNCC	5 cut(s)	150, 522, 2010, 2040, 2131
BspMAI	CTGCAG	3 cut(s)	1185, 2017, 2218
BspOI	GCTAGC	1 cut(s)	1209
BspPI	GGATC	4 cut(s)	1700, 2033, 2046, 2073
BspQI	GCTCTTC	1 cut(s)	27
BspT107I	GGYRCC	1 cut(s)	148
BspTNI	GGTCTC	2 cut(s)	124, 1645
BsrBI	CCGCTC	1 cut(s)	37
BsrDI	GCAATG	2 cut(s)	1013, 1811
BsrGI	TGTACA	1 cut(s)	2293
BsrI	ACTGG	5 cut(s)	150, 319, 1091, 1979, 2221
BssECI	CCNNGG	4 cut(s)	152, 569, 1709, 1949
BssMI	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
BssNI	GRCGYC	1 cut(s)	1974
Bst2UI	CCWGG	6 cut(s)	570, 621, 1387, 1710, 1950, 2100
Bst4CI	ACNGT	9 cut(s)	639, 887, 1100, 1117, 1236, 1885, 2148, 2306, 2407
Bst6I	CTCTTC	3 cut(s)	27, 857, 2018
BstACI	GRCGYC	1 cut(s)	1974
BstAPI	GCANNNNNTGC	1 cut(s)	749
BstAUI	TGTACA	1 cut(s)	2293
BstBAI	YACGTR	1 cut(s)	778
BstC8I	GCNNGC	6 cut(s)	51, 137, 773, 1207, 1749, 2218
BstEII	GGTNACC	1 cut(s)	2444
BstF5I	GGATG	8 cut(s)	274, 409, 445, 1080, 1150, 1468, 2133, 2176
BstFNI	CGCG	4 cut(s)	163, 265, 2152, 2249
BstH2I	RGCGCY	1 cut(s)	1748
BstHHI	GCGC	3 cut(s)	165, 1334, 1747
BstKTI	GATC	6 cut(s)	1708, 2041, 2068, 2113, 2208, 2269
BstMAI	GTCTC	4 cut(s)	124, 1142, 1645, 1896
BstMBI	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
BstMWI	GCNNNNNNNGC	7 cut(s)	46, 440, 514, 749, 961, 1588, 1742
BstNI	CCWGG	6 cut(s)	570, 621, 1387, 1710, 1950, 2100
BstNSI	RCATGY	1 cut(s)	139
BstPI	GGTNACC	1 cut(s)	2444
BstSCI	CCNGG	7 cut(s)	151, 568, 619, 1385, 1708, 1948, 2098
BstSFI	CTRYAG	5 cut(s)	509, 1181, 1881, 2013, 2214
BstSLI	GKGCMC	1 cut(s)	2133
BstUI	CGCG	4 cut(s)	163, 265, 2152, 2249
BstV1I	GCAGC	5 cut(s)	526, 1651, 1717, 1720, 2200
BstV2I	GAAGAC	1 cut(s)	656
BstX2I	RGATCY	4 cut(s)	1705, 2038, 2110, 2266
BstXI	CCANNNNNNTGG	1 cut(s)	1920
BstYI	RGATCY	4 cut(s)	1705, 2038, 2110, 2266
Bsu15I	ATCGAT	1 cut(s)	2343
Bsu36I	CCTNAGG	1 cut(s)	294
BsuI	GTATCC	1 cut(s)	1992
BsuRI	GGCC	7 cut(s)	40, 351, 799, 992, 1295, 2131, 2220
BsuTUI	ATCGAT	1 cut(s)	2343
BtsCI	GGATG	8 cut(s)	274, 409, 445, 1080, 1150, 1468, 2133, 2176
BtsI	GCAGTG	2 cut(s)	104, 429
BtsIMutI	CAGTG	8 cut(s)	104, 143, 326, 429, 1098, 2118, 2311, 2403
Cac8I	GCNNGC	6 cut(s)	51, 137, 773, 1207, 1749, 2218
CaiI	CAGNNNCTG	2 cut(s)	1121, 1664
CciI	TCATGA	1 cut(s)	2235
CfoI	GCGC	3 cut(s)	165, 1334, 1747
Cfr13I	GGNCC	5 cut(s)	349, 521, 991, 2129, 2130
ClaI	ATCGAT	1 cut(s)	2343
CseI	GACGC	3 cut(s)	944, 1394, 1982
Csp6I	GTAC	3 cut(s)	1025, 1232, 2294
CviAII	CATG	6 cut(s)	136, 1450, 1574, 1903, 2138, 2236
CviQI	GTAC	3 cut(s)	1025, 1232, 2294
DpnI	GATC	6 cut(s)	1707, 2040, 2067, 2112, 2207, 2268
DpnII	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
DraI	TTTAAA	3 cut(s)	88, 559, 672
DraIII	CACNNNGTG	1 cut(s)	665
Eam1104I	CTCTTC	3 cut(s)	27, 857, 2018
EarI	CTCTTC	3 cut(s)	27, 857, 2018
Eco147I	AGGCCT	2 cut(s)	799, 1295
Eco24I	GRGCYC	1 cut(s)	2133
Eco31I	GGTCTC	2 cut(s)	124, 1645
Eco47I	GGWCC	1 cut(s)	521
Eco47III	AGCGCT	1 cut(s)	1746
Eco57I	CTGAAG	4 cut(s)	980, 1302, 1641, 2042
Eco72I	CACGTG	1 cut(s)	778
Eco81I	CCTNAGG	1 cut(s)	294
Eco91I	GGTNACC	1 cut(s)	2444
EcoO109I	RGGNCCY	2 cut(s)	521, 2129
EcoO65I	GGTNACC	1 cut(s)	2444
EcoRII	CCWGG	6 cut(s)	568, 619, 1385, 1708, 1948, 2098
EcoT22I	ATGCAT	1 cut(s)	445
EcoT38I	GRGCYC	1 cut(s)	2133
FaeI	CATG	6 cut(s)	139, 1453, 1577, 1906, 2141, 2239
FaqI	GGGAC	5 cut(s)	534, 992, 1030, 1171, 1384
FatI	CATG	6 cut(s)	135, 1449, 1573, 1902, 2137, 2235
FauI	CCCGC	4 cut(s)	258, 394, 510, 1596
Fnu4HI	GCNGC	6 cut(s)	38, 515, 1665, 1731, 1734, 2214
FokI	GGATG	8 cut(s)	281, 396, 452, 1087, 1157, 1475, 2120, 2163
FriOI	GRGCYC	1 cut(s)	2133
Fsp4HI	GCNGC	6 cut(s)	38, 515, 1665, 1731, 1734, 2214
FspBI	CTAG	7 cut(s)	981, 1206, 1443, 1530, 1832, 2114, 2142
FspI	TGCGCA	1 cut(s)	1333
GlaI	GCGC	3 cut(s)	164, 1333, 1746
GluI	GCNGC	6 cut(s)	38, 515, 1665, 1731, 1734, 2214
GsuI	CTGGAG	2 cut(s)	642, 1344
HaeII	RGCGCY	1 cut(s)	1748
HaeIII	GGCC	7 cut(s)	40, 351, 799, 992, 1295, 2131, 2220
HapII	CCGG	2 cut(s)	152, 1139
HgaI	GACGC	3 cut(s)	944, 1394, 1982
HhaI	GCGC	3 cut(s)	165, 1334, 1747
Hin1I	GRCGYC	1 cut(s)	1974
Hin1II	CATG	6 cut(s)	139, 1453, 1577, 1906, 2141, 2239
Hin6I	GCGC	3 cut(s)	163, 1332, 1745
HinP1I	GCGC	3 cut(s)	163, 1332, 1745
HincII	GTYRAC	1 cut(s)	496
HindII	GTYRAC	1 cut(s)	496
HindIII	AAGCTT	1 cut(s)	2431
HpaII	CCGG	2 cut(s)	152, 1139
HphI	GGTGA	4 cut(s)	32, 816, 1517, 2083
Hpy166II	GTNNAC	5 cut(s)	496, 1096, 2294, 2389, 2403
Hpy188III	TCNNGA	9 cut(s)	293, 413, 897, 1168, 1361, 1622, 1970, 2236, 2437
Hpy8I	GTNNAC	5 cut(s)	496, 1096, 2294, 2389, 2403
Hpy99I	CGWCG	2 cut(s)	49, 2038
HpyAV	CCTTC	5 cut(s)	232, 1167, 1251, 1665, 2150
HpyCH4III	ACNGT	9 cut(s)	639, 887, 1100, 1117, 1236, 1885, 2148, 2306, 2407
HpyCH4IV	ACGT	3 cut(s)	777, 1487, 2033
HpyF10VI	GCNNNNNNNGC	7 cut(s)	46, 440, 514, 749, 961, 1588, 1742
HpySE526I	ACGT	3 cut(s)	777, 1487, 2033
Hsp92I	GRCGYC	1 cut(s)	1974
Hsp92II	CATG	6 cut(s)	139, 1453, 1577, 1906, 2141, 2239
HspAI	GCGC	3 cut(s)	163, 1332, 1745
Kzo9I	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
LguI	GCTCTTC	1 cut(s)	27
LmnI	GCTCC	5 cut(s)	170, 201, 694, 952, 1402
Lsp1109I	GCAGC	5 cut(s)	526, 1651, 1717, 1720, 2200
LweI	GCATC	7 cut(s)	222, 406, 430, 825, 869, 918, 2185
MaeI	CTAG	7 cut(s)	981, 1206, 1443, 1530, 1832, 2114, 2142
MaeII	ACGT	3 cut(s)	777, 1487, 2033
MaeIII	GTNAC	7 cut(s)	181, 332, 657, 915, 2091, 2306, 2444
MalI	GATC	6 cut(s)	1707, 2040, 2067, 2112, 2207, 2268
MbiI	CCGCTC	1 cut(s)	37
MboI	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
MboII	GAAGA	9 cut(s)	26, 44, 661, 844, 1152, 1478, 1715, 2035, 2251
MfeI	CAATTG	1 cut(s)	1104
MflI	RGATCY	4 cut(s)	1705, 2038, 2110, 2266
MhlI	GDGCHC	1 cut(s)	2133
MlyI	GAGTC	7 cut(s)	646, 843, 1052, 1067, 1073, 1144, 2411
MmeI	TCCRAC	1 cut(s)	2016
Mph1103I	ATGCAT	1 cut(s)	445
MroXI	GAANNNNTTC	2 cut(s)	789, 1261
MseI	TTAA	9 cut(s)	87, 450, 501, 558, 630, 671, 1931, 2052, 2328
MslI	CAYNNNNRTG	5 cut(s)	414, 877, 1901, 1918, 2396
MspA1I	CMGCKG	1 cut(s)	517
MspI	CCGG	2 cut(s)	152, 1139
MspR9I	CCNGG	7 cut(s)	153, 570, 621, 1387, 1710, 1950, 2100
MunI	CAATTG	1 cut(s)	1104
MvaI	CCWGG	6 cut(s)	570, 621, 1387, 1710, 1950, 2100
MvnI	CGCG	4 cut(s)	163, 265, 2152, 2249
MwoI	GCNNNNNNNGC	7 cut(s)	46, 440, 514, 749, 961, 1588, 1742
NciI	CCSGG	1 cut(s)	153
NdeII	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
NheI	GCTAGC	1 cut(s)	1205
NlaIII	CATG	6 cut(s)	139, 1453, 1577, 1906, 2141, 2239
NlaIV	GGNNCC	5 cut(s)	150, 522, 2010, 2040, 2131
NmeAIII	GCCGAG	1 cut(s)	1808
NmuCI	GTSAC	4 cut(s)	657, 2091, 2306, 2444
NsbI	TGCGCA	1 cut(s)	1333
NsiI	ATGCAT	1 cut(s)	445
NspI	RCATGY	1 cut(s)	139
PaeI	GCATGC	1 cut(s)	139
PagI	TCATGA	1 cut(s)	2235
PceI	AGGCCT	2 cut(s)	799, 1295
PciSI	GCTCTTC	1 cut(s)	27
PdmI	GAANNNNTTC	2 cut(s)	789, 1261
PflFI	GACNNNGTC	1 cut(s)	655
PflMI	CCANNNNNTGG	2 cut(s)	1367, 2227
PfoI	TCCNGGA	2 cut(s)	619, 2098
PkrI	GCNGC	6 cut(s)	39, 516, 1666, 1732, 1735, 2215
PleI	GAGTC	7 cut(s)	646, 843, 1051, 1066, 1073, 1144, 2411
PmaCI	CACGTG	1 cut(s)	778
PmlI	CACGTG	1 cut(s)	778
PpsI	GAGTC	7 cut(s)	646, 843, 1051, 1066, 1073, 1144, 2411
Ppu21I	YACGTR	1 cut(s)	778
PpuMI	RGGWCCY	1 cut(s)	521
Psp5II	RGGWCCY	1 cut(s)	521
Psp6I	CCWGG	6 cut(s)	568, 619, 1385, 1708, 1948, 2098
PspCI	CACGTG	1 cut(s)	778
PspEI	GGTNACC	1 cut(s)	2444
PspGI	CCWGG	6 cut(s)	568, 619, 1385, 1708, 1948, 2098
PspN4I	GGNNCC	5 cut(s)	150, 522, 2010, 2040, 2131
PspOMI	GGGCCC	1 cut(s)	2129
PspPI	GGNCC	5 cut(s)	349, 521, 991, 2129, 2130
PspPPI	RGGWCCY	1 cut(s)	521
PsrI	GAACNNNNNNTAC	2 cut(s)	534, 566
PstI	CTGCAG	3 cut(s)	1185, 2017, 2218
PstNI	CAGNNNCTG	2 cut(s)	1121, 1664
PsuI	RGATCY	4 cut(s)	1705, 2038, 2110, 2266
PsyI	GACNNNGTC	1 cut(s)	655
RsaI	GTAC	3 cut(s)	1026, 1233, 2295
RsaNI	GTAC	3 cut(s)	1025, 1232, 2294
RseI	CAYNNNNRTG	5 cut(s)	414, 877, 1901, 1918, 2396
SapI	GCTCTTC	1 cut(s)	27
SaqAI	TTAA	9 cut(s)	87, 450, 501, 558, 630, 671, 1931, 2052, 2328
SatI	GCNGC	6 cut(s)	38, 515, 1665, 1731, 1734, 2214
Sau3AI	GATC	6 cut(s)	1705, 2038, 2065, 2110, 2205, 2266
Sau96I	GGNCC	5 cut(s)	349, 521, 991, 2129, 2130
SchI	GAGTC	7 cut(s)	646, 843, 1052, 1067, 1073, 1144, 2411
ScrFI	CCNGG	7 cut(s)	153, 570, 621, 1387, 1710, 1950, 2100
SduI	GDGCHC	1 cut(s)	2133
SfaNI	GCATC	7 cut(s)	222, 406, 430, 825, 869, 918, 2185
SfcI	CTRYAG	5 cut(s)	509, 1181, 1881, 2013, 2214
SinI	GGWCC	1 cut(s)	521
SmiI	ATTTAAAT	1 cut(s)	672
SmiMI	CAYNNNNRTG	5 cut(s)	414, 877, 1901, 1918, 2396
SmlI	CTYRAG	2 cut(s)	734, 1166
SmoI	CTYRAG	2 cut(s)	734, 1166
SphI	GCATGC	1 cut(s)	139
SseBI	AGGCCT	2 cut(s)	799, 1295
SspMI	CTAG	7 cut(s)	981, 1206, 1443, 1530, 1832, 2114, 2142
StuI	AGGCCT	2 cut(s)	799, 1295
StyD4I	CCNGG	7 cut(s)	151, 568, 619, 1385, 1708, 1948, 2098
SwaI	ATTTAAAT	1 cut(s)	672
TaaI	ACNGT	9 cut(s)	639, 887, 1100, 1117, 1236, 1885, 2148, 2306, 2407
TaiI	ACGT	3 cut(s)	780, 1490, 2036
TaqI	TCGA	6 cut(s)	131, 839, 877, 2208, 2343, 2436
TatI	WGTACW	2 cut(s)	1024, 2293
TauI	GCSGC	1 cut(s)	40
Tru1I	TTAA	9 cut(s)	87, 450, 501, 558, 630, 671, 1931, 2052, 2328
Tru9I	TTAA	9 cut(s)	87, 450, 501, 558, 630, 671, 1931, 2052, 2328
TscAI	CASTG	8 cut(s)	111, 150, 326, 436, 1098, 2125, 2311, 2410
TseFI	GTSAC	4 cut(s)	657, 2091, 2306, 2444
TseI	GCWGC	5 cut(s)	514, 1664, 1730, 1733, 2213
Tsp45I	GTSAC	4 cut(s)	657, 2091, 2306, 2444
TspDTI	ATGAA	8 cut(s)	398, 1479, 1524, 1562, 1686, 2151, 2252, 2390
TspGWI	ACGGA	3 cut(s)	33, 214, 645
TspRI	CASTG	8 cut(s)	111, 150, 326, 436, 1098, 2125, 2311, 2410
Tth111I	GACNNNGTC	1 cut(s)	655
Van91I	CCANNNNNTGG	2 cut(s)	1367, 2227
VpaK11BI	GGWCC	1 cut(s)	521
XceI	RCATGY	1 cut(s)	139
XmnI	GAANNNNTTC	2 cut(s)	789, 1261
XspI	CTAG	7 cut(s)	981, 1206, 1443, 1530, 1832, 2114, 2142
Zsp2I	ATGCAT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.