Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0006052

Physical Location & Seq

Genomic Coordinates Forward (+)

20342108 .. 20348534

Gene Structure 6427 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g17090.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGGAGGGTAAAGAAGATGCTGAAGCATACGAAGAGCAGCCTCCGTCGCGTATTCAGGTTTTGCAGGAAATATCTGAGGAGGCACTTGAAGTGGCAGGGGAAACACTGCAAAATGTGGTCCCGGGTAATTCGAGCATGCCACCTTTGGCACCGGGGCATAGGCGCTCCCGAAGTGAAATTGTAACTACGGGACACAGACGGAGCAATAGCTTCCAGAAATTGAAAAATCAGATGCAGAGGGCGTGGAGATGGGGTGGAAATTCGCGGGATGATTTGCGGTTGGCTTTCAATCCTGAGGTTTTGGCAAACCAAAAACGCCAGTGGTATCAGCTTCACTCCAAATCAAAGGGCCATATAAGATATACCGAGCCAACTTCACTCTTTGAGCATTTTATTATTGCGGGCCTTCATCCGGATGCTAACCTTGAAACTGTGGAGGATGCATTTGTTAAAAGAAAGAAATGGGAGATGGAGATGATAAACTCTGGAATTGTTGACCTTAAATTGCTACAGCAGCGGGGACCTCCAATTCCTACATTAGAACCTCAGATACTTTTCAAATATCCTCCTGGGAAGCGTCTAGATATGCGTTTGAAAGATTTAGCTTCCTTTTGTTTTCCTGGAGGGGTTAAGGCACGGTTAATGGAGAAGACTCCATCACTAAGTGATTTAAATCAAGTTGTTTACGGACAGGAGCATTTAGGAAAAGATGATTTATCATTTATTTTCTCACTCAAGGTGGCAGACAATGCAACACTTTATGGTGTTTGCCTACACGTGTCAGAAATTGTTCAGAGGCCTCCTGCTATCTTAGGCATCTCATCACCTAATTCTCATTCGATGGGAGGACTCTTCCGATTTTTGGTTTCTGCGCCTCGATGCTACTGTGTGCTATCCAGAGTTCCTTTTTTTGAGTTACACTACGAGATGCTGAATAGTATCGTTCAACAGGAGCGTCTGAAGCGAATAACACAATTTGCTAGTGAAATGGCCCTTGCTGATTTTGTCCCTACATTGCCCAATGTACAAGATAATGATGATGAGTCCCCTGAGAGGGAGTCTTTTGATAATTGGATGGGCTCTGCAATACCAGTTGACAGTCCAATTGCCCTTACAGCTGCTGGTGCAGGAATTAGACCGGATGCTGAGACTCCACCTTCTTCACTCAAGATATGGGAACCGCAGTCCCCTGAAAGTGTCTCTGCTAGCGAGAGTTCAGATTTTAGTCAAGTACGGTATTTAGACAAGGATGGTAGAAAGGATTCACAATGTTCTGATGACTATGGTTTTGAGGTCTCAGAAACTCATTCGGAAACTTCAGAAAGAATATGCGGAAGCTATGGAAATAACCATACTTTTTCAGAGGTTGGGACATCTTTCTCATCCAGGAACCGCACATTGGAGCGTCTTGGCAGTTCTGAATCTTTATTCAGTCCAGCTAGAAGCATGGTATCGGAGGATGAAGATGATGACCTTTTCTCGACTTGTGAGAAAGAGTTTGGTGATGAACTGATAATGGAATGGGCTAGGGAGAACAAGAACGATTTGTTACAGATTGTTTGTGGTTTTCATGCTCTGCCTCTCCCACAACGAGGAAGTGAATTATCCTTTCTACCTCTTGAACATCTTCAAGCTACTGATTATAGGCGACCTCCAGTAGCTGCTCTTGGTTTTGATGAGAATAGTTTAGATTCATTTCAGGATCCTGGGGTCAATGTTATGCTAGCTGCTGCTGAAGAAGCGCTTGCACTATCAATATGGACAACTGCAACAATCTGCCGAGTTCTCTCCCTTGAAAGTATTTTATCATTGCTTACGGGAGTATTACTGGAAAAACAAGTGGTAATAGTGTGTCCGAATCTGGGTGTGCTATCAGCTACAGTATTATCTCTCATTCCCATGATTCGTCCATTTCAATGGCAGAGTTTAATGCTTCCTGTTCTACCAGGGAAAATGCTTGACTTTCTTGACGCCCCAGTTCCATTTATTACTGGGATACAACAGGTTCCTGCAGACCTGAAGAGGAAAACATCGGATACTGTTCAAGTTAATGTGCAAAAGGATCAGGTGAAAATGTGTCATTTGCCGTCACTTCCAAGACATAAAGATCTATCCACTGAATTAGGGCCCATCCATGCTAGACTGTCACGTGAAGGTTCATTTGCTAAAAAGCATCCTGTATATAGGTGCAACGAAGTGCAGGTCGAAGCTGCAGGTCAATTTTTGGAAGTCATGAAGAACTACATGGAGTCACTTTGTTCAGATCTAAGGTCTTACACAATAACAAGTGTACAATCAAACAGTGACAGGGTTTCTTTACTTCTTAAAGAGAGCTTTATCGATTCCTTTCCTAGCAAGGACAGGCAATTTATCAAGTTGTTTGTGGACACGCAGATGTTCACTGTTCTATCCGACTCTCGTTTGTCAAGCTTTGAGAACGGTGGCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DENN uDENN

Protein Analysis

817

Amino Acids

91.47

Weight (kDa)

5.27

Isoelectric Point (pI)

48.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20320 AT2G20320
fragaria_vesca	FvH4_2g20280
malus_domestica	MD05G1186700.v1.1 MD10G1174800.v1.1
prunus_persica	Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1 Prupe.8G213500_v2.0.a1
pyrus_communis	pycom05g17090 pycom10g15050
rosa_chinensis	RchiOBHm_Chr6g0286081
rosa_laevigata	RLG00000012584
rosa_multiflora	Rmu_sc0023663.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182470
rosa_rugosa	Rorug06G0178800
rosa_samantha	Rh3BG272300 Rh6AG291200 Rh6BG294500 Rh6CG294100 Rh6DG286100
rosa_wichuraiana	Rw6G025090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	2191, 2204
AccB1I	GGYRCC	1 cut(s)	148
AccII	CGCG	2 cut(s)	49, 265
AccIII	TCCGGA	1 cut(s)	412
AciI	CCGC	7 cut(s)	265, 277, 401, 517, 1181, 1332, 1393
AclWI	GGATC	3 cut(s)	1697, 1710, 2070
AcsI	RAATTY	1 cut(s)	259
AcuI	CTGAAG	5 cut(s)	42, 980, 1302, 1755, 2039
AcvI	CACGTG	2 cut(s)	778, 2150
AcyI	GRCGYC	1 cut(s)	1971
AdeI	CACNNNGTG	1 cut(s)	665
AfaI	GTAC	3 cut(s)	1026, 1233, 2292
AfeI	AGCGCT	1 cut(s)	1743
AfiI	CCNNNNNNNGG	7 cut(s)	412, 862, 1053, 1054, 1399, 1592, 1862
AflIII	ACRYGT	2 cut(s)	775, 777
AjnI	CCWGG	5 cut(s)	568, 619, 1385, 1705, 1945
AjuI	GAANNNNNNNTTGG	2 cut(s)	1382, 1414
Alw26I	GTCTC	3 cut(s)	1142, 1204, 1300
AlwI	GGATC	3 cut(s)	1697, 1710, 2070
AlwNI	CAGNNNCTG	2 cut(s)	1121, 1661
Ama87I	CYCGRG	1 cut(s)	121
Aor13HI	TCCGGA	1 cut(s)	412
Aor51HI	AGCGCT	1 cut(s)	1743
AoxI	GGCC	5 cut(s)	349, 403, 797, 990, 2126
ApaI	GGGCCC	1 cut(s)	2130
ApeKI	GCWGC	7 cut(s)	37, 514, 1118, 1661, 1727, 1730, 2210
ApoI	RAATTY	1 cut(s)	259
ArsI	GACNNNNNNTTYG	4 cut(s)	1271, 1303, 2187, 2219
Asp700I	GAANNNNTTC	3 cut(s)	789, 1261, 1626
AspLEI	GCGC	3 cut(s)	165, 874, 1744
AspS9I	GGNCC	7 cut(s)	118, 349, 403, 521, 991, 2126, 2127
AsuC2I	CCSGG	3 cut(s)	122, 123, 153
AsuHPI	GGTGA	3 cut(s)	816, 1514, 2080
AsuNHI	GCTAGC	2 cut(s)	1205, 1723
AvaI	CYCGRG	1 cut(s)	121
AvaII	GGWCC	2 cut(s)	118, 521
AxyI	CCTNAGG	1 cut(s)	294
BaeGI	GKGCMC	1 cut(s)	2130
BamHI	GGATCC	1 cut(s)	1702
BanI	GGYRCC	1 cut(s)	148
BanII	GRGCYC	2 cut(s)	1082, 2130
BbrPI	CACGTG	2 cut(s)	778, 2150
BbsI	GAAGAC	1 cut(s)	656
BbvI	GCAGC	7 cut(s)	49, 526, 1105, 1648, 1714, 1717, 2197
BccI	CCATC	7 cut(s)	243, 463, 664, 835, 1069, 1244, 2138
BceAI	ACGGC	1 cut(s)	2071
BciT130I	CCWGG	5 cut(s)	570, 621, 1387, 1707, 1947
BciVI	GTATCC	2 cut(s)	1989, 2029
BcnI	CCSGG	3 cut(s)	122, 123, 153
BcoDI	GTCTC	3 cut(s)	1142, 1204, 1300
BfaI	CTAG	8 cut(s)	581, 981, 1206, 1440, 1527, 1724, 2139, 2352
BfmI	CTRYAG	4 cut(s)	509, 1878, 2010, 2211
BfoI	RGCGCY	2 cut(s)	166, 1745
BfuAI	ACCTGC	2 cut(s)	2191, 2204
BfuI	GTATCC	2 cut(s)	1989, 2029
BglII	AGATCT	2 cut(s)	2107, 2263
BisI	GCNGC	7 cut(s)	38, 515, 1119, 1662, 1728, 1731, 2211
BlsI	GCNGC	7 cut(s)	39, 516, 1120, 1663, 1729, 1732, 2212
Bme1390I	CCNGG	8 cut(s)	122, 123, 153, 570, 621, 1387, 1707, 1947
Bme18I	GGWCC	2 cut(s)	118, 521
BmeT110I	CYCGRG	1 cut(s)	121
BmgT120I	GGNCC	7 cut(s)	118, 349, 403, 521, 991, 2126, 2127
BmiI	GGNNCC	8 cut(s)	120, 150, 522, 1179, 1391, 1704, 2007, 2128
BmrFI	CCNGG	8 cut(s)	122, 123, 153, 570, 621, 1387, 1707, 1947
BmrI	ACTGGG	2 cut(s)	1970, 2001
BmsI	GCATC	9 cut(s)	7, 222, 406, 430, 825, 869, 918, 1132, 2182
BmtI	GCTAGC	2 cut(s)	1209, 1727
BmuI	ACTGGG	2 cut(s)	1970, 2001
BpiI	GAAGAC	1 cut(s)	656
BpmI	CTGGAG	2 cut(s)	642, 1638
BpuEI	CTTGAG	2 cut(s)	719, 1151
BpuMI	CCSGG	3 cut(s)	122, 123, 153
Bsa29I	ATCGAT	1 cut(s)	2340
BsaAI	YACGTR	2 cut(s)	778, 2150
BsaBI	GATNNNNATC	1 cut(s)	672
BsaHI	GRCGYC	1 cut(s)	1971
BsaI	GGTCTC	1 cut(s)	1300
BsaJI	CCNNGG	5 cut(s)	121, 152, 569, 1706, 1946
BsaWI	WCCGGW	2 cut(s)	412, 1138
BsaXI	ACNNNNNCTCC	2 cut(s)	238, 268
Bsc4I	CCNNNNNNNGG	7 cut(s)	412, 862, 1053, 1054, 1399, 1592, 1862
Bse1I	ACTGG	6 cut(s)	319, 1091, 1655, 1833, 1976, 1996
Bse21I	CCTNAGG	1 cut(s)	294
Bse3DI	GCAATG	2 cut(s)	1013, 1808
Bse8I	GATNNNNATC	1 cut(s)	672
BseAI	TCCGGA	1 cut(s)	412
BseBI	CCWGG	5 cut(s)	570, 621, 1387, 1707, 1947
BseCI	ATCGAT	1 cut(s)	2340
BseDI	CCNNGG	5 cut(s)	121, 152, 569, 1706, 1946
BseJI	GATNNNNATC	1 cut(s)	672
BseLI	CCNNNNNNNGG	7 cut(s)	412, 862, 1053, 1054, 1399, 1592, 1862
BseMI	GCAATG	2 cut(s)	1013, 1808
BseMII	CTCAG	6 cut(s)	66, 285, 560, 1041, 1137, 1311
BseNI	ACTGG	6 cut(s)	319, 1091, 1655, 1833, 1976, 1996
BseRI	GAGGAG	1 cut(s)	92
BseSI	GKGCMC	1 cut(s)	2130
BseXI	GCAGC	7 cut(s)	49, 526, 1105, 1648, 1714, 1717, 2197
BsgI	GTGCAG	2 cut(s)	1146, 2219
Bsh1236I	CGCG	2 cut(s)	49, 265
BshFI	GGCC	5 cut(s)	351, 405, 799, 992, 2128
BshNI	GGYRCC	1 cut(s)	148
BshVI	ATCGAT	1 cut(s)	2340
BsiHKCI	CYCGRG	1 cut(s)	121
BsiSI	CCGG	4 cut(s)	122, 152, 413, 1139
BslFI	GGGAC	7 cut(s)	104, 204, 534, 992, 1030, 1171, 1384
BslI	CCNNNNNNNGG	7 cut(s)	412, 862, 1053, 1054, 1399, 1592, 1862
BsmAI	GTCTC	3 cut(s)	1142, 1204, 1300
BsmFI	GGGAC	7 cut(s)	104, 204, 534, 992, 1030, 1171, 1384
BsnI	GGCC	5 cut(s)	351, 405, 799, 992, 2128
Bso31I	GGTCTC	1 cut(s)	1300
BsoBI	CYCGRG	1 cut(s)	121
Bsp120I	GGGCCC	1 cut(s)	2126
Bsp1286I	GDGCHC	2 cut(s)	1082, 2130
Bsp13I	TCCGGA	1 cut(s)	412
Bsp1407I	TGTACA	2 cut(s)	1024, 2290
Bsp143I	GATC	4 cut(s)	1702, 2062, 2107, 2263
BspACI	CCGC	7 cut(s)	265, 277, 401, 517, 1181, 1332, 1393
BspANI	GGCC	5 cut(s)	351, 405, 799, 992, 2128
BspCNI	CTCAG	6 cut(s)	67, 286, 559, 1042, 1138, 1310
BspDI	ATCGAT	1 cut(s)	2340
BspEI	TCCGGA	1 cut(s)	412
BspFNI	CGCG	2 cut(s)	49, 265
BspHI	TCATGA	1 cut(s)	2232
BspLI	GGNNCC	8 cut(s)	120, 150, 522, 1179, 1391, 1704, 2007, 2128
BspMAI	CTGCAG	2 cut(s)	2014, 2215
BspMI	ACCTGC	2 cut(s)	2191, 2204
BspOI	GCTAGC	2 cut(s)	1209, 1727
BspPI	GGATC	3 cut(s)	1697, 1710, 2070
BspQI	GCTCTTC	1 cut(s)	27
BspT107I	GGYRCC	1 cut(s)	148
BspTNI	GGTCTC	1 cut(s)	1300
BsrDI	GCAATG	2 cut(s)	1013, 1808
BsrGI	TGTACA	2 cut(s)	1024, 2290
BsrI	ACTGG	6 cut(s)	319, 1091, 1655, 1833, 1976, 1996
BssECI	CCNNGG	5 cut(s)	121, 152, 569, 1706, 1946
BssMI	GATC	4 cut(s)	1702, 2062, 2107, 2263
BssNI	GRCGYC	1 cut(s)	1971
Bst2UI	CCWGG	5 cut(s)	570, 621, 1387, 1707, 1947
Bst6I	CTCTTC	3 cut(s)	27, 857, 2015
BstACI	GRCGYC	1 cut(s)	1971
BstAPI	GCANNNNNTGC	1 cut(s)	749
BstAUI	TGTACA	2 cut(s)	1024, 2290
BstBAI	YACGTR	2 cut(s)	778, 2150
BstC8I	GCNNGC	5 cut(s)	137, 403, 1207, 1725, 1746
BstDEI	CTNAG	9 cut(s)	75, 294, 546, 662, 811, 1050, 1146, 1297, 2267
BstFNI	CGCG	2 cut(s)	49, 265
BstH2I	RGCGCY	2 cut(s)	166, 1745
BstHHI	GCGC	3 cut(s)	165, 874, 1744
BstKTI	GATC	4 cut(s)	1705, 2065, 2110, 2266
BstMAI	GTCTC	3 cut(s)	1142, 1204, 1300
BstMBI	GATC	4 cut(s)	1702, 2062, 2107, 2263
BstMWI	GCNNNNNNNGC	7 cut(s)	46, 514, 749, 961, 1115, 1124, 1739
BstNI	CCWGG	5 cut(s)	570, 621, 1387, 1707, 1947
BstNSI	RCATGY	1 cut(s)	139
BstSCI	CCNGG	8 cut(s)	120, 121, 151, 568, 619, 1385, 1705, 1945
BstSFI	CTRYAG	4 cut(s)	509, 1878, 2010, 2211
BstSLI	GKGCMC	1 cut(s)	2130
BstUI	CGCG	2 cut(s)	49, 265
BstV1I	GCAGC	7 cut(s)	49, 526, 1105, 1648, 1714, 1717, 2197
BstV2I	GAAGAC	1 cut(s)	656
BstX2I	RGATCY	3 cut(s)	1702, 2107, 2263
BstXI	CCANNNNNNTGG	1 cut(s)	1917
BstYI	RGATCY	3 cut(s)	1702, 2107, 2263
Bsu15I	ATCGAT	1 cut(s)	2340
Bsu36I	CCTNAGG	1 cut(s)	294
BsuI	GTATCC	2 cut(s)	1989, 2029
BsuRI	GGCC	5 cut(s)	351, 405, 799, 992, 2128
BsuTUI	ATCGAT	1 cut(s)	2340
BtsI	GCAGTG	1 cut(s)	104
BtsIMutI	CAGTG	5 cut(s)	104, 326, 2115, 2308, 2400
BveI	ACCTGC	2 cut(s)	2191, 2204
Cac8I	GCNNGC	5 cut(s)	137, 403, 1207, 1725, 1746
CaiI	CAGNNNCTG	2 cut(s)	1121, 1661
CciI	TCATGA	1 cut(s)	2232
CfoI	GCGC	3 cut(s)	165, 874, 1744
Cfr13I	GGNCC	7 cut(s)	118, 349, 403, 521, 991, 2126, 2127
Cfr9I	CCCGGG	1 cut(s)	121
ClaI	ATCGAT	1 cut(s)	2340
CseI	GACGC	4 cut(s)	566, 944, 1394, 1979
Csp6I	GTAC	3 cut(s)	1025, 1232, 2291
CviAII	CATG	7 cut(s)	136, 1447, 1571, 1900, 2135, 2233, 2245
CviQI	GTAC	3 cut(s)	1025, 1232, 2291
DdeI	CTNAG	9 cut(s)	75, 294, 546, 662, 811, 1050, 1146, 1297, 2267
DpnI	GATC	4 cut(s)	1704, 2064, 2109, 2265
DpnII	GATC	4 cut(s)	1702, 2062, 2107, 2263
DraI	TTTAAA	1 cut(s)	672
DraIII	CACNNNGTG	1 cut(s)	665
Eam1104I	CTCTTC	3 cut(s)	27, 857, 2015
EarI	CTCTTC	3 cut(s)	27, 857, 2015
Eco147I	AGGCCT	1 cut(s)	799
Eco24I	GRGCYC	2 cut(s)	1082, 2130
Eco31I	GGTCTC	1 cut(s)	1300
Eco47I	GGWCC	2 cut(s)	118, 521
Eco47III	AGCGCT	1 cut(s)	1743
Eco57I	CTGAAG	5 cut(s)	42, 980, 1302, 1755, 2039
Eco72I	CACGTG	2 cut(s)	778, 2150
Eco81I	CCTNAGG	1 cut(s)	294
Eco88I	CYCGRG	1 cut(s)	121
EcoO109I	RGGNCCY	2 cut(s)	521, 2126
EcoRII	CCWGG	5 cut(s)	568, 619, 1385, 1705, 1945
EcoT22I	ATGCAT	1 cut(s)	445
EcoT38I	GRGCYC	2 cut(s)	1082, 2130
FaeI	CATG	7 cut(s)	139, 1450, 1574, 1903, 2138, 2236, 2248
FalI	AAGNNNNNCTT	2 cut(s)	1728, 1760
FaqI	GGGAC	7 cut(s)	104, 204, 534, 992, 1030, 1171, 1384
FatI	CATG	7 cut(s)	135, 1446, 1570, 1899, 2134, 2232, 2244
FauI	CCCGC	3 cut(s)	258, 394, 510
Fnu4HI	GCNGC	7 cut(s)	38, 515, 1119, 1662, 1728, 1731, 2211
FriOI	GRGCYC	2 cut(s)	1082, 2130
Fsp4HI	GCNGC	7 cut(s)	38, 515, 1119, 1662, 1728, 1731, 2211
FspBI	CTAG	8 cut(s)	581, 981, 1206, 1440, 1527, 1724, 2139, 2352
GlaI	GCGC	3 cut(s)	164, 873, 1743
GluI	GCNGC	7 cut(s)	38, 515, 1119, 1662, 1728, 1731, 2211
GsuI	CTGGAG	2 cut(s)	642, 1638
HaeII	RGCGCY	2 cut(s)	166, 1745
HaeIII	GGCC	5 cut(s)	351, 405, 799, 992, 2128
HapII	CCGG	4 cut(s)	122, 152, 413, 1139
HgaI	GACGC	4 cut(s)	566, 944, 1394, 1979
HhaI	GCGC	3 cut(s)	165, 874, 1744
Hin1I	GRCGYC	1 cut(s)	1971
Hin1II	CATG	7 cut(s)	139, 1450, 1574, 1903, 2138, 2236, 2248
Hin6I	GCGC	3 cut(s)	163, 872, 1742
HinP1I	GCGC	3 cut(s)	163, 872, 1742
HincII	GTYRAC	2 cut(s)	496, 1096
HindII	GTYRAC	2 cut(s)	496, 1096
HindIII	AAGCTT	1 cut(s)	2428
HpaII	CCGG	4 cut(s)	122, 152, 413, 1139
HphI	GGTGA	3 cut(s)	816, 1514, 2080
Hpy166II	GTNNAC	6 cut(s)	496, 685, 1096, 2291, 2386, 2400
Hpy8I	GTNNAC	6 cut(s)	496, 685, 1096, 2291, 2386, 2400
Hpy99I	CGWCG	1 cut(s)	49
HpyAV	CCTTC	3 cut(s)	416, 1167, 2147
HpyCH4IV	ACGT	2 cut(s)	777, 2149
HpyF10VI	GCNNNNNNNGC	7 cut(s)	46, 514, 749, 961, 1115, 1124, 1739
HpyF3I	CTNAG	9 cut(s)	75, 294, 546, 662, 811, 1050, 1146, 1297, 2267
HpySE526I	ACGT	2 cut(s)	777, 2149
Hsp92I	GRCGYC	1 cut(s)	1971
Hsp92II	CATG	7 cut(s)	139, 1450, 1574, 1903, 2138, 2236, 2248
HspAI	GCGC	3 cut(s)	163, 872, 1742
Kpn2I	TCCGGA	1 cut(s)	412
Kzo9I	GATC	4 cut(s)	1702, 2062, 2107, 2263
LguI	GCTCTTC	1 cut(s)	27
LmnI	GCTCC	5 cut(s)	170, 201, 694, 952, 1402
Lsp1109I	GCAGC	7 cut(s)	49, 526, 1105, 1648, 1714, 1717, 2197
LweI	GCATC	9 cut(s)	7, 222, 406, 430, 825, 869, 918, 1132, 2182
MaeI	CTAG	8 cut(s)	581, 981, 1206, 1440, 1527, 1724, 2139, 2352
MaeII	ACGT	2 cut(s)	777, 2149
MaeIII	GTNAC	7 cut(s)	181, 915, 1548, 2088, 2145, 2250, 2303
MalI	GATC	4 cut(s)	1704, 2064, 2109, 2265
MboI	GATC	4 cut(s)	1702, 2062, 2107, 2263
MfeI	CAATTG	1 cut(s)	1104
MflI	RGATCY	3 cut(s)	1702, 2107, 2263
MhlI	GDGCHC	2 cut(s)	1082, 2130
MlyI	GAGTC	7 cut(s)	646, 843, 1052, 1067, 1144, 2258, 2408
MmeI	TCCRAC	1 cut(s)	2436
Mph1103I	ATGCAT	1 cut(s)	445
MroI	TCCGGA	1 cut(s)	412
MroXI	GAANNNNTTC	3 cut(s)	789, 1261, 1626
MseI	TTAA	8 cut(s)	450, 501, 630, 641, 671, 1928, 2049, 2325
MslI	CAYNNNNRTG	4 cut(s)	414, 1898, 1915, 2393
MspA1I	CMGCKG	2 cut(s)	517, 1118
MspI	CCGG	4 cut(s)	122, 152, 413, 1139
MspR9I	CCNGG	8 cut(s)	122, 123, 153, 570, 621, 1387, 1707, 1947
MunI	CAATTG	1 cut(s)	1104
MvaI	CCWGG	5 cut(s)	570, 621, 1387, 1707, 1947
MvnI	CGCG	2 cut(s)	49, 265
MwoI	GCNNNNNNNGC	7 cut(s)	46, 514, 749, 961, 1115, 1124, 1739
NciI	CCSGG	3 cut(s)	122, 123, 153
NdeII	GATC	4 cut(s)	1702, 2062, 2107, 2263
NheI	GCTAGC	2 cut(s)	1205, 1723
NlaIII	CATG	7 cut(s)	139, 1450, 1574, 1903, 2138, 2236, 2248
NlaIV	GGNNCC	8 cut(s)	120, 150, 522, 1179, 1391, 1704, 2007, 2128
NmeAIII	GCCGAG	1 cut(s)	1805
NmuCI	GTSAC	4 cut(s)	2088, 2145, 2250, 2303
NsiI	ATGCAT	1 cut(s)	445
NspI	RCATGY	1 cut(s)	139
PaeI	GCATGC	1 cut(s)	139
PagI	TCATGA	1 cut(s)	2232
PceI	AGGCCT	1 cut(s)	799
PciSI	GCTCTTC	1 cut(s)	27
PdmI	GAANNNNTTC	3 cut(s)	789, 1261, 1626
PfeI	GAWTC	6 cut(s)	1262, 1421, 1691, 1858, 1903, 2342
PfoI	TCCNGGA	2 cut(s)	619, 1385
PkrI	GCNGC	7 cut(s)	39, 516, 1120, 1663, 1729, 1732, 2212
PleI	GAGTC	7 cut(s)	646, 843, 1051, 1066, 1144, 2257, 2408
PmaCI	CACGTG	2 cut(s)	778, 2150
PmlI	CACGTG	2 cut(s)	778, 2150
PpsI	GAGTC	7 cut(s)	646, 843, 1051, 1066, 1144, 2257, 2408
Ppu21I	YACGTR	2 cut(s)	778, 2150
PpuMI	RGGWCCY	1 cut(s)	521
Psp5II	RGGWCCY	1 cut(s)	521
Psp6I	CCWGG	5 cut(s)	568, 619, 1385, 1705, 1945
PspCI	CACGTG	2 cut(s)	778, 2150
PspGI	CCWGG	5 cut(s)	568, 619, 1385, 1705, 1945
PspN4I	GGNNCC	8 cut(s)	120, 150, 522, 1179, 1391, 1704, 2007, 2128
PspOMI	GGGCCC	1 cut(s)	2126
PspPI	GGNCC	7 cut(s)	118, 349, 403, 521, 991, 2126, 2127
PspPPI	RGGWCCY	1 cut(s)	521
PsrI	GAACNNNNNNTAC	2 cut(s)	534, 566
PstI	CTGCAG	2 cut(s)	2014, 2215
PstNI	CAGNNNCTG	2 cut(s)	1121, 1661
PsuI	RGATCY	3 cut(s)	1702, 2107, 2263
PvuII	CAGCTG	1 cut(s)	1118
RsaI	GTAC	3 cut(s)	1026, 1233, 2292
RsaNI	GTAC	3 cut(s)	1025, 1232, 2291
RseI	CAYNNNNRTG	4 cut(s)	414, 1898, 1915, 2393
SapI	GCTCTTC	1 cut(s)	27
SaqAI	TTAA	8 cut(s)	450, 501, 630, 641, 671, 1928, 2049, 2325
SatI	GCNGC	7 cut(s)	38, 515, 1119, 1662, 1728, 1731, 2211
Sau3AI	GATC	4 cut(s)	1702, 2062, 2107, 2263
Sau96I	GGNCC	7 cut(s)	118, 349, 403, 521, 991, 2126, 2127
SchI	GAGTC	7 cut(s)	646, 843, 1052, 1067, 1144, 2258, 2408
ScrFI	CCNGG	8 cut(s)	122, 123, 153, 570, 621, 1387, 1707, 1947
SduI	GDGCHC	2 cut(s)	1082, 2130
SfaNI	GCATC	9 cut(s)	7, 222, 406, 430, 825, 869, 918, 1132, 2182
SfcI	CTRYAG	4 cut(s)	509, 1878, 2010, 2211
SinI	GGWCC	2 cut(s)	118, 521
SmaI	CCCGGG	1 cut(s)	123
SmiI	ATTTAAAT	1 cut(s)	672
SmiMI	CAYNNNNRTG	4 cut(s)	414, 1898, 1915, 2393
SmlI	CTYRAG	2 cut(s)	734, 1166
SmoI	CTYRAG	2 cut(s)	734, 1166
SphI	GCATGC	1 cut(s)	139
SseBI	AGGCCT	1 cut(s)	799
SsiI	CCGC	7 cut(s)	265, 277, 401, 517, 1181, 1332, 1393
SspMI	CTAG	8 cut(s)	581, 981, 1206, 1440, 1527, 1724, 2139, 2352
StuI	AGGCCT	1 cut(s)	799
StyD4I	CCNGG	8 cut(s)	120, 121, 151, 568, 619, 1385, 1705, 1945
SwaI	ATTTAAAT	1 cut(s)	672
TaiI	ACGT	2 cut(s)	780, 2152
TaqI	TCGA	6 cut(s)	131, 839, 877, 1481, 2205, 2340
TatI	WGTACW	2 cut(s)	1024, 2290
TfiI	GAWTC	6 cut(s)	1262, 1421, 1691, 1858, 1903, 2342
Tru1I	TTAA	8 cut(s)	450, 501, 630, 641, 671, 1928, 2049, 2325
Tru9I	TTAA	8 cut(s)	450, 501, 630, 641, 671, 1928, 2049, 2325
TscAI	CASTG	5 cut(s)	111, 326, 2122, 2308, 2407
TseFI	GTSAC	4 cut(s)	2088, 2145, 2250, 2303
TseI	GCWGC	7 cut(s)	37, 514, 1118, 1661, 1727, 1730, 2210
Tsp45I	GTSAC	4 cut(s)	2088, 2145, 2250, 2303
TspDTI	ATGAA	7 cut(s)	398, 1476, 1521, 1559, 1683, 2148, 2249
TspGWI	ACGGA	3 cut(s)	33, 214, 702
TspMI	CCCGGG	1 cut(s)	121
TspRI	CASTG	5 cut(s)	111, 326, 2122, 2308, 2407
VpaK11BI	GGWCC	2 cut(s)	118, 521
XapI	RAATTY	1 cut(s)	259
XbaI	TCTAGA	1 cut(s)	580
XceI	RCATGY	1 cut(s)	139
XmaI	CCCGGG	1 cut(s)	121
XmnI	GAANNNNTTC	3 cut(s)	789, 1261, 1626
XspI	CTAG	8 cut(s)	581, 981, 1206, 1440, 1527, 1724, 2139, 2352
Zsp2I	ATGCAT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.