Rroxscaffold_7G00182470

Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0006052
Physical Location & Seq
Reverse (-)
21559356 .. 21567045
7690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00182470.1

Sequence Viewer

Length: 2430 bp
ATGAGCTTAGTGTTTGAAATGGATGCAAAAGAAGATGCTGAAGGACACGAAGAGGGGGGTTCGTCCCCTATTCAGGTTATATCTGAGGAGGCATGCACAGTGGCAGGAGAAGCCCCCAATAACTTGGCCAGTCCGAATATGCCGCCATTGGCACCGGGGAATGGGCATAGGCGGACCCAAAGTGATGTTTTAACCACCAAACACAGGCGCAGTCATAGCTTTCAGAGATTGAAAAACCAAATGCAGAAGGCTTGGAGATGGGGGACCAATCATGATTCCCGGCTGGCTTTCAATCCTGAGGTTTTGGCAAACCAAAAACGCCAGTGGTATCAGCTTCACTCCAAATCAAAGGGTCATGTAAATTATCAGGAGCCAACTTCACTCTTTGAGCATTTTATAATTGCGGGGCTTCATCCAGATACTAATCTTAAAAATGCCGAGGCAGCATTCATTAAAAGAAAGAGATGGGAGACGGACATGATAAGCTATGGAATTACCGACCTTAAATTACTGCAGCAGAAGGGACCTCCAGCCCCAATATTAGAACCTCAGGTACTTTTTAAATATCCTCCCGGGAAGAGGCTAGCGATGCGTTTGAAAGATTTAGCTTCCTTTTGTTTTCCTGGAGGTGTTAAGGCACGATTAATGGAGAAGACTCCCTCACTAAGTGACCTTAATCAAATTGTGTATGGACAGGTAGCAGACAATGCAACACTTTATGGTATTTGCCTACATGTGTTGGAAATAGTTCAGAGGCCTCCTGCTATCTTAGGCATCACATCACCTCTTCCTCATTCATCTGAAGGACTCTTCCGTTTTTTGGTTTCTGCACCTCGGTGCTACTGTCTGTTATCCAAATATCCTTTTTTTGAGTTACATTACGAGATGTTGAACAGTATCATTCAACAGGAGCGTCTGAGTCGAATAACACAACTTGCAAATGGAATGAGCCTCAATGACCATGTCCCTTCAATGCCCAAAATAGATGATGAAATGAATAATAATGAGGAGTCCCCTGAGACAGAGTCTTTTGATGATTGGATGAATTCTGCAATCCCTGTTGACAGTGCAATAGCCCGTACAGCTGTTGCTGCAGGAATTACACCTGATGATGAGACTTCAACTTCTTCACTCAAGATATGGGAACCACAGTCCCCGGAAAGTGCTTCTGCTAGTGAGGCTCCAGATTTTATTCAAGTACGCTATTTAGATAAGGATGATAGAAAGGATTCACAATGTTTTGATGACTGTGGTTCCTCAGAAACTTCAGAAAGAATATATGGAAGTCACACAAATGGCCATACTTCACGCGAGAGTCTTGGGAGTTCTGAATCTCTATTTAGAAATGGTCATACTTCTCCAGAAGTTGGGACATCTTTCTCCTCCAGGAATCGCACATTGGAGCGTTTTGGGAGTTCTGAATCTCTATTCAGTCCAGCTAGAAGCATGTCAGAGGATGATGATGATGACCTTTCCTCAACTTGTGAGCAAGATTTTAGCGATGACTTGATAATGGCATGGGCTAGGGAGAATAAAAACGATTTGCTACAGATTTTATGTGGTTTTCATGCTCTTCCTCTTCCCGAACGAGGAAGTGAGTTAGTTTTCCAACCTCTTGAACATCTACAGGCAATCCAGTATAATCGACCTCCAATTGCTGCCCTTGGTTTTGATGAAAAAAATTTAGATTCATCTGAAGATCCTGGGGTTGATGCAAAGTTGGCTGCTGCTGAGGAAGCGCTTTCACTATCACTGTGGACAACTGCTACAATTTGCCGAGTTCTCTCTGTTGAAAGTATTTTGGCATTGGTTGCGGGAGTACTACTGGAAAAGCAAGTGATATTAGTATGCCCTAATCTGGGTGTTCTATCAGCTACAGTTTTATCTCTCATACCCATGATTCGTCCATTTCAATGGCAGAGTTTAATGCTTCCTGTTCTACCAGGGAAAATGCTGGATTTTCTTGATGCCCCAGTTCCCTTCATTATTGGGATAGAACAAGTTCCTGCAGATCTAAGGAAGAAAACATCAGATCCTATTGTAGTTAACGTGCTCATGGATCAGGTGAAACTGTCTCATCACTTGCCAACATTACCACGATATAGAGATCTTGCCCTTGAACTCGCGCCAATCCATTCTAAACTGTCACTCGAAGGTTCATTTGCTAAAAAGCATCCTGTATATAGGTGCAACGAAGTGCAGGCTGAAGCTGCAGCCCAGTTTTTGAAAGTCATGAAGAACTACATTGAGTCACTTTGTTCAGAGCTAAGGTCTTACACCATAACAAGTGTTTCGTTGCTTCTCAAAGATAGCTTCATTGATTCCTTTCCTAGTAAGGACCGGTCATTTATCAAGTTGTTGGTAGACACACAAATGTTCACAGTTCTATCCGACTCTCGTCTGTCAAGCTTAGAGAATGGCAACCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DENN dDENN uDENN

Protein Analysis

809

Amino Acids

90.13

Weight (kDa)

5.33

Isoelectric Point (pI)

49.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DENN PF02141 590 - 683 1.2e-21 DENN (AEX-3) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 398
AccB1I GGYRCC 1 cut(s) 151
AccB7I CCANNNNNTGG 1 cut(s) 1367
AccI GTMKAC 1 cut(s) 2364
AccII CGCG 2 cut(s) 1311, 2126
AciI CCGC 4 cut(s) 143, 172, 404, 1814
AclWI GGATC 3 cut(s) 1694, 2027, 2067
AcoI YGGCCR 2 cut(s) 126, 1297
AcsI RAATTY 2 cut(s) 1045, 1681
AcuI CTGAAG 5 cut(s) 60, 822, 1251, 1716, 2226
AdeI CACNNNGTG 1 cut(s) 668
AfaI GTAC 4 cut(s) 555, 1081, 1200, 1821
AfeI AGCGCT 1 cut(s) 1740
AfiI CCNNNNNNNGG 9 cut(s) 73, 161, 204, 579, 820, 1367, 1589, 1858, 1859
AflIII ACRYGT 1 cut(s) 733
AgeI ACCGGT 1 cut(s) 2340
AjnI CCWGG 4 cut(s) 622, 1385, 1702, 1942
AjuI GAANNNNNNNTTGG 2 cut(s) 1382, 1414
AleI CACNNNNGTG 1 cut(s) 835
Alw21I GWGCWC 1 cut(s) 2055
Alw26I GTCTC 4 cut(s) 464, 1013, 1109, 2079
AlwI GGATC 3 cut(s) 1694, 2027, 2067
Ama87I CYCGRG 1 cut(s) 572
Aor51HI AGCGCT 1 cut(s) 1740
AoxI GGCC 3 cut(s) 126, 755, 1297
ApeKI GCWGC 8 cut(s) 443, 514, 1091, 1658, 1724, 1727, 2210, 2213
ApoI RAATTY 2 cut(s) 1045, 1681
AseI ATTAAT 1 cut(s) 644
AsiGI ACCGGT 1 cut(s) 2340
Asp700I GAANNNNTTC 3 cut(s) 747, 1228, 2001
AspLEI GCGC 3 cut(s) 210, 1741, 2128
AspS9I GGNCC 4 cut(s) 174, 264, 524, 2338
AsuC2I CCSGG 5 cut(s) 156, 280, 573, 574, 1157
AsuHPI GGTGA 2 cut(s) 774, 2077
AsuNHI GCTAGC 1 cut(s) 583
AvaI CYCGRG 1 cut(s) 572
AvaII GGWCC 4 cut(s) 174, 264, 524, 2338
AxyI CCTNAGG 2 cut(s) 297, 549
BalI TGGCCA 2 cut(s) 128, 1299
BanI GGYRCC 1 cut(s) 151
BbsI GAAGAC 1 cut(s) 659
Bbv12I GWGCWC 1 cut(s) 2055
BbvCI CCTCAGC 1 cut(s) 1731
BbvI GCAGC 8 cut(s) 455, 526, 1078, 1645, 1711, 1714, 2197, 2225
BccI CCATC 2 cut(s) 252, 459
BciT130I CCWGG 4 cut(s) 624, 1387, 1704, 1944
BcnI CCSGG 5 cut(s) 156, 280, 573, 574, 1157
BcoDI GTCTC 4 cut(s) 464, 1013, 1109, 2079
BfaI CTAG 5 cut(s) 584, 1173, 1440, 1524, 2331
BfmI CTRYAG 7 cut(s) 512, 1092, 1547, 1625, 1875, 2007, 2211
BfoI RGCGCY 1 cut(s) 1742
BglII AGATCT 2 cut(s) 2011, 2107
BisI GCNGC 9 cut(s) 143, 444, 515, 1092, 1659, 1725, 1728, 2211, 2214
BlsI GCNGC 9 cut(s) 144, 445, 516, 1093, 1660, 1726, 1729, 2212, 2215
BmcAI AGTACT 1 cut(s) 1821
Bme1390I CCNGG 9 cut(s) 156, 280, 573, 574, 624, 1157, 1387, 1704, 1944
Bme18I GGWCC 4 cut(s) 174, 264, 524, 2338
BmeT110I CYCGRG 1 cut(s) 572
BmgT120I GGNCC 4 cut(s) 174, 264, 524, 2338
BmiI GGNNCC 8 cut(s) 153, 176, 265, 372, 525, 1146, 1182, 1255
BmrFI CCNGG 9 cut(s) 156, 280, 573, 574, 624, 1157, 1387, 1704, 1944
BmrI ACTGGG 2 cut(s) 1967, 2212
BmsI GCATC 7 cut(s) 13, 25, 579, 783, 1702, 1957, 2182
BmtI GCTAGC 1 cut(s) 587
BmuI ACTGGG 2 cut(s) 1967, 2212
BoxI GACNNNNGTC 1 cut(s) 2397
BpiI GAAGAC 1 cut(s) 659
BpmI CTGGAG 5 cut(s) 513, 645, 1167, 1344, 1369
Bpu10I CCTNAGC 2 cut(s) 1731, 2267
BpuEI CTTGAG 1 cut(s) 1118
BpuMI CCSGG 5 cut(s) 156, 280, 573, 574, 1157
BsaBI GATNNNNATC 1 cut(s) 423
BsaJI CCNNGG 8 cut(s) 155, 438, 572, 833, 1155, 1663, 1703, 1943
BsaWI WCCGGW 1 cut(s) 2340
Bsc4I CCNNNNNNNGG 9 cut(s) 73, 161, 204, 579, 820, 1367, 1589, 1858, 1859
Bse118I RCCGGY 1 cut(s) 2340
Bse1I ACTGG 6 cut(s) 129, 322, 1636, 1830, 1973, 2218
Bse21I CCTNAGG 2 cut(s) 297, 549
Bse8I GATNNNNATC 1 cut(s) 423
BseBI CCWGG 4 cut(s) 624, 1387, 1704, 1944
BseDI CCNNGG 8 cut(s) 155, 438, 572, 833, 1155, 1663, 1703, 1943
BseGI GGATG 6 cut(s) 28, 412, 1047, 1222, 1462, 2173
BseJI GATNNNNATC 1 cut(s) 423
BseLI CCNNNNNNNGG 9 cut(s) 73, 161, 204, 579, 820, 1367, 1589, 1858, 1859
BseMII CTCAG 7 cut(s) 75, 288, 563, 908, 1008, 1272, 1722
BseNI ACTGG 6 cut(s) 129, 322, 1636, 1830, 1973, 2218
BseRI GAGGAG 3 cut(s) 101, 1022, 1372
BseXI GCAGC 8 cut(s) 455, 526, 1078, 1645, 1711, 1714, 2197, 2225
BsgI GTGCAG 2 cut(s) 813, 2219
Bsh1236I CGCG 2 cut(s) 1311, 2126
BshFI GGCC 3 cut(s) 128, 757, 1299
BshNI GGYRCC 1 cut(s) 151
BshTI ACCGGT 1 cut(s) 2340
BsiHKAI GWGCWC 1 cut(s) 2055
BsiHKCI CYCGRG 1 cut(s) 572
BsiSI CCGG 5 cut(s) 155, 280, 573, 1157, 2341
BslFI GGGAC 7 cut(s) 49, 277, 537, 950, 997, 1138, 1384
BslI CCNNNNNNNGG 9 cut(s) 73, 161, 204, 579, 820, 1367, 1589, 1858, 1859
BsmAI GTCTC 4 cut(s) 464, 1013, 1109, 2079
BsmBI CGTCTC 1 cut(s) 464
BsmFI GGGAC 7 cut(s) 49, 277, 537, 950, 997, 1138, 1384
BsmI GAATGC 1 cut(s) 446
BsnI GGCC 3 cut(s) 128, 757, 1299
BsoBI CYCGRG 1 cut(s) 572
Bsp1286I GDGCHC 1 cut(s) 2055
Bsp143I GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
BspACI CCGC 4 cut(s) 143, 172, 404, 1814
BspANI GGCC 3 cut(s) 128, 757, 1299
BspCNI CTCAG 7 cut(s) 76, 289, 562, 909, 1009, 1271, 1723
BspFNI CGCG 2 cut(s) 1311, 2126
BspHI TCATGA 2 cut(s) 271, 2232
BspLI GGNNCC 8 cut(s) 153, 176, 265, 372, 525, 1146, 1182, 1255
BspMAI CTGCAG 4 cut(s) 516, 1096, 2011, 2215
BspOI GCTAGC 1 cut(s) 587
BspPI GGATC 3 cut(s) 1694, 2027, 2067
BspQI GCTCTTC 1 cut(s) 1578
BspT107I GGYRCC 1 cut(s) 151
BsrFI RCCGGY 1 cut(s) 2340
BsrI ACTGG 6 cut(s) 129, 322, 1636, 1830, 1973, 2218
BssAI RCCGGY 1 cut(s) 2340
BssECI CCNNGG 8 cut(s) 155, 438, 572, 833, 1155, 1663, 1703, 1943
BssMI GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
BssT1I CCWWGG 1 cut(s) 1663
Bst2UI CCWGG 4 cut(s) 624, 1387, 1704, 1944
Bst6I CTCTTC 6 cut(s) 45, 572, 792, 815, 1578, 1584
BstAPI GCANNNNNTGC 2 cut(s) 707, 1811
BstC8I GCNNGC 4 cut(s) 94, 285, 585, 2202
BstF5I GGATG 6 cut(s) 28, 412, 1047, 1222, 1462, 2173
BstFNI CGCG 2 cut(s) 1311, 2126
BstH2I RGCGCY 1 cut(s) 1742
BstHHI GCGC 3 cut(s) 210, 1741, 2128
BstKTI GATC 5 cut(s) 1702, 2014, 2035, 2062, 2110
BstMAI GTCTC 4 cut(s) 464, 1013, 1109, 2079
BstMBI GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
BstNI CCWGG 4 cut(s) 624, 1387, 1704, 1944
BstNSI RCATGY 3 cut(s) 96, 737, 1450
BstPAI GACNNNNGTC 1 cut(s) 2397
BstSCI CCNGG 9 cut(s) 154, 278, 571, 572, 622, 1155, 1385, 1702, 1942
BstSFI CTRYAG 7 cut(s) 512, 1092, 1547, 1625, 1875, 2007, 2211
BstUI CGCG 2 cut(s) 1311, 2126
BstV1I GCAGC 8 cut(s) 455, 526, 1078, 1645, 1711, 1714, 2197, 2225
BstV2I GAAGAC 1 cut(s) 659
BstX2I RGATCY 4 cut(s) 1699, 2011, 2032, 2107
BstXI CCANNNNNNTGG 2 cut(s) 124, 1914
BstYI RGATCY 4 cut(s) 1699, 2011, 2032, 2107
Bsu36I CCTNAGG 2 cut(s) 297, 549
BsuRI GGCC 3 cut(s) 128, 757, 1299
BtgZI GCGATG 2 cut(s) 602, 1515
BtsCI GGATG 6 cut(s) 28, 412, 1047, 1222, 1462, 2173
BtsIMutI CAGTG 4 cut(s) 105, 329, 1072, 1751
Cac8I GCNNGC 4 cut(s) 94, 285, 585, 2202
CciI TCATGA 2 cut(s) 271, 2232
CfoI GCGC 3 cut(s) 210, 1741, 2128
Cfr10I RCCGGY 1 cut(s) 2340
Cfr13I GGNCC 4 cut(s) 174, 264, 524, 2338
Cfr9I CCCGGG 1 cut(s) 572
CseI GACGC 1 cut(s) 902
Csp6I GTAC 4 cut(s) 554, 1080, 1199, 1820
CspAI ACCGGT 1 cut(s) 2340
CviQI GTAC 4 cut(s) 554, 1080, 1199, 1820
DpnI GATC 5 cut(s) 1701, 2013, 2034, 2061, 2109
DpnII GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
DraI TTTAAA 1 cut(s) 562
DraIII CACNNNGTG 1 cut(s) 668
EaeI YGGCCR 2 cut(s) 126, 1297
Eam1104I CTCTTC 6 cut(s) 45, 572, 792, 815, 1578, 1584
EarI CTCTTC 6 cut(s) 45, 572, 792, 815, 1578, 1584
EciI GGCGGA 1 cut(s) 187
Eco130I CCWWGG 1 cut(s) 1663
Eco147I AGGCCT 1 cut(s) 757
Eco47I GGWCC 4 cut(s) 174, 264, 524, 2338
Eco47III AGCGCT 1 cut(s) 1740
Eco57I CTGAAG 5 cut(s) 60, 822, 1251, 1716, 2226
Eco81I CCTNAGG 2 cut(s) 297, 549
Eco88I CYCGRG 1 cut(s) 572
EcoO109I RGGNCCY 1 cut(s) 524
EcoRI GAATTC 1 cut(s) 1045
EcoRII CCWGG 4 cut(s) 622, 1385, 1702, 1942
EcoT14I CCWWGG 1 cut(s) 1663
ErhI CCWWGG 1 cut(s) 1663
Esp3I CGTCTC 1 cut(s) 464
FaqI GGGAC 7 cut(s) 49, 277, 537, 950, 997, 1138, 1384
FauI CCCGC 2 cut(s) 397, 1807
FblI GTMKAC 1 cut(s) 2364
Fnu4HI GCNGC 9 cut(s) 143, 444, 515, 1092, 1659, 1725, 1728, 2211, 2214
FokI GGATG 6 cut(s) 35, 399, 1054, 1229, 1469, 2160
Fsp4HI GCNGC 9 cut(s) 143, 444, 515, 1092, 1659, 1725, 1728, 2211, 2214
FspBI CTAG 5 cut(s) 584, 1173, 1440, 1524, 2331
GlaI GCGC 3 cut(s) 209, 1740, 2127
GluI GCNGC 9 cut(s) 143, 444, 515, 1092, 1659, 1725, 1728, 2211, 2214
GsuI CTGGAG 5 cut(s) 513, 645, 1167, 1344, 1369
HaeII RGCGCY 1 cut(s) 1742
HaeIII GGCC 3 cut(s) 128, 757, 1299
HapII CCGG 5 cut(s) 155, 280, 573, 1157, 2341
HgaI GACGC 1 cut(s) 902
HhaI GCGC 3 cut(s) 210, 1741, 2128
Hin6I GCGC 3 cut(s) 208, 1739, 2126
HinP1I GCGC 3 cut(s) 208, 1739, 2126
HincII GTYRAC 2 cut(s) 1063, 2047
HindII GTYRAC 2 cut(s) 1063, 2047
HindIII AAGCTT 1 cut(s) 2407
HpaI GTTAAC 1 cut(s) 2047
HpaII CCGG 5 cut(s) 155, 280, 573, 1157, 2341
HphI GGTGA 2 cut(s) 774, 2077
Hpy166II GTNNAC 5 cut(s) 1063, 1758, 2047, 2365, 2379
Hpy8I GTNNAC 5 cut(s) 1063, 1758, 2047, 2365, 2379
HpyAV CCTTC 7 cut(s) 35, 241, 514, 797, 978, 1990, 2147
HpyCH4IV ACGT 1 cut(s) 2049
HpySE526I ACGT 1 cut(s) 2049
HspAI GCGC 3 cut(s) 208, 1739, 2126
KspAI GTTAAC 1 cut(s) 2047
Kzo9I GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
LguI GCTCTTC 1 cut(s) 1578
LmnI GCTCC 4 cut(s) 370, 910, 1186, 1402
Lsp1109I GCAGC 8 cut(s) 455, 526, 1078, 1645, 1711, 1714, 2197, 2225
LweI GCATC 7 cut(s) 13, 25, 579, 783, 1702, 1957, 2182
MaeI CTAG 5 cut(s) 584, 1173, 1440, 1524, 2331
MaeII ACGT 1 cut(s) 2049
MaeIII GTNAC 5 cut(s) 668, 873, 1286, 2145, 2250
MalI GATC 5 cut(s) 1701, 2013, 2034, 2061, 2109
MboI GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
MfeI CAATTG 1 cut(s) 1653
MflI RGATCY 4 cut(s) 1699, 2011, 2032, 2107
MhlI GDGCHC 1 cut(s) 2055
MlsI TGGCCA 2 cut(s) 128, 1299
MluNI TGGCCA 2 cut(s) 128, 1299
MlyI GAGTC 8 cut(s) 649, 801, 928, 1019, 1034, 1324, 2258, 2387
MmeI TCCRAC 3 cut(s) 720, 1633, 2415
Mox20I TGGCCA 2 cut(s) 128, 1299
MroXI GAANNNNTTC 3 cut(s) 747, 1228, 2001
MscI TGGCCA 2 cut(s) 128, 1299
MslI CAYNNNNRTG 5 cut(s) 835, 1293, 1895, 1912, 2372
Msp20I TGGCCA 2 cut(s) 128, 1299
MspA1I CMGCKG 1 cut(s) 1085
MspI CCGG 5 cut(s) 155, 280, 573, 1157, 2341
MspR9I CCNGG 9 cut(s) 156, 280, 573, 574, 624, 1157, 1387, 1704, 1944
MunI CAATTG 1 cut(s) 1653
Mva1269I GAATGC 1 cut(s) 446
MvaI CCWGG 4 cut(s) 624, 1387, 1704, 1944
MvnI CGCG 2 cut(s) 1311, 2126
NciI CCSGG 5 cut(s) 156, 280, 573, 574, 1157
NdeII GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
NheI GCTAGC 1 cut(s) 583
NlaIV GGNNCC 8 cut(s) 153, 176, 265, 372, 525, 1146, 1182, 1255
NmeAIII GCCGAG 2 cut(s) 463, 1802
NmuCI GTSAC 4 cut(s) 668, 1286, 2145, 2250
NspI RCATGY 3 cut(s) 96, 737, 1450
OliI CACNNNNGTG 1 cut(s) 835
PaeI GCATGC 1 cut(s) 96
PagI TCATGA 2 cut(s) 271, 2232
PceI AGGCCT 1 cut(s) 757
PciI ACATGT 1 cut(s) 733
PciSI GCTCTTC 1 cut(s) 1578
PctI GAATGC 1 cut(s) 446
PdmI GAANNNNTTC 3 cut(s) 747, 1228, 2001
PfeI GAWTC 8 cut(s) 275, 1229, 1331, 1390, 1421, 1688, 1900, 2321
PflFI GACNNNGTC 2 cut(s) 962, 1024
PflMI CCANNNNNTGG 1 cut(s) 1367
PfoI TCCNGGA 2 cut(s) 622, 1385
PinAI ACCGGT 1 cut(s) 2340
PkrI GCNGC 9 cut(s) 144, 445, 516, 1093, 1660, 1726, 1729, 2212, 2215
PleI GAGTC 8 cut(s) 649, 801, 927, 1018, 1033, 1323, 2257, 2387
PpsI GAGTC 8 cut(s) 649, 801, 927, 1018, 1033, 1323, 2257, 2387
PpuMI RGGWCCY 1 cut(s) 524
PscI ACATGT 1 cut(s) 733
PshAI GACNNNNGTC 1 cut(s) 2397
PshBI ATTAAT 1 cut(s) 644
PsiI TTATAA 1 cut(s) 398
Psp5II RGGWCCY 1 cut(s) 524
Psp6I CCWGG 4 cut(s) 622, 1385, 1702, 1942
PspGI CCWGG 4 cut(s) 622, 1385, 1702, 1942
PspN4I GGNNCC 8 cut(s) 153, 176, 265, 372, 525, 1146, 1182, 1255
PspPI GGNCC 4 cut(s) 174, 264, 524, 2338
PspPPI RGGWCCY 1 cut(s) 524
PsrI GAACNNNNNNTAC 2 cut(s) 537, 569
PstI CTGCAG 4 cut(s) 516, 1096, 2011, 2215
PsuI RGATCY 4 cut(s) 1699, 2011, 2032, 2107
PsyI GACNNNGTC 2 cut(s) 962, 1024
PvuII CAGCTG 1 cut(s) 1085
RsaI GTAC 4 cut(s) 555, 1081, 1200, 1821
RsaNI GTAC 4 cut(s) 554, 1080, 1199, 1820
RseI CAYNNNNRTG 5 cut(s) 835, 1293, 1895, 1912, 2372
SapI GCTCTTC 1 cut(s) 1578
SatI GCNGC 9 cut(s) 143, 444, 515, 1092, 1659, 1725, 1728, 2211, 2214
Sau3AI GATC 5 cut(s) 1699, 2011, 2032, 2059, 2107
Sau96I GGNCC 4 cut(s) 174, 264, 524, 2338
ScaI AGTACT 1 cut(s) 1821
SchI GAGTC 8 cut(s) 649, 801, 928, 1019, 1034, 1324, 2258, 2387
ScrFI CCNGG 9 cut(s) 156, 280, 573, 574, 624, 1157, 1387, 1704, 1944
SduI GDGCHC 1 cut(s) 2055
SfaNI GCATC 7 cut(s) 13, 25, 579, 783, 1702, 1957, 2182
SfcI CTRYAG 7 cut(s) 512, 1092, 1547, 1625, 1875, 2007, 2211
SinI GGWCC 4 cut(s) 174, 264, 524, 2338
SmaI CCCGGG 1 cut(s) 574
SmiMI CAYNNNNRTG 5 cut(s) 835, 1293, 1895, 1912, 2372
SmlI CTYRAG 1 cut(s) 1133
SmoI CTYRAG 1 cut(s) 1133
SphI GCATGC 1 cut(s) 96
SseBI AGGCCT 1 cut(s) 757
SsiI CCGC 4 cut(s) 143, 172, 404, 1814
SspI AATATT 1 cut(s) 540
SspMI CTAG 5 cut(s) 584, 1173, 1440, 1524, 2331
StuI AGGCCT 1 cut(s) 757
StyD4I CCNGG 9 cut(s) 154, 278, 571, 572, 622, 1155, 1385, 1702, 1942
StyI CCWWGG 1 cut(s) 1663
TaiI ACGT 1 cut(s) 2052
TaqI TCGA 3 cut(s) 922, 1645, 2151
TatI WGTACW 1 cut(s) 1819
TauI GCSGC 1 cut(s) 145
TfiI GAWTC 8 cut(s) 275, 1229, 1331, 1390, 1421, 1688, 1900, 2321
TscAI CASTG 4 cut(s) 105, 329, 1072, 1758
TseFI GTSAC 4 cut(s) 668, 1286, 2145, 2250
TseI GCWGC 8 cut(s) 443, 514, 1091, 1658, 1724, 1727, 2210, 2213
Tsp45I GTSAC 4 cut(s) 668, 1286, 2145, 2250
TspGWI ACGGA 2 cut(s) 488, 803
TspMI CCCGGG 1 cut(s) 572
TspRI CASTG 4 cut(s) 105, 329, 1072, 1758
Tth111I GACNNNGTC 2 cut(s) 962, 1024
Van91I CCANNNNNTGG 1 cut(s) 1367
VpaK11BI GGWCC 4 cut(s) 174, 264, 524, 2338
VspI ATTAAT 1 cut(s) 644
XapI RAATTY 2 cut(s) 1045, 1681
XceI RCATGY 3 cut(s) 96, 737, 1450
XmaI CCCGGG 1 cut(s) 572
XmiI GTMKAC 1 cut(s) 2364
XmnI GAANNNNTTC 3 cut(s) 747, 1228, 2001
XspI CTAG 5 cut(s) 584, 1173, 1440, 1524, 2331
ZrmI AGTACT 1 cut(s) 1821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.