Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003852

Physical Location & Seq

Genomic Coordinates Reverse (-)

9210623 .. 9213102

Gene Structure 2480 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G21510.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGGTGAAAGAGACTGAATACTACGAGATCTTAGGCGTCAAAACTGATGCTTCAGATGCTGAGATTAAAAAGGCTTACTACTTAAAAGCAAGGAAAGTTCATCCAGACAAGAACCCTGGAGACCCTCAAGCTGCTAAAAACTTTCAGGTTTTAGGTGAGGCTTATCAGGTTCTAAGCAATCCGGATAAGCGAGCAGCTTATGACAAATATGGCAAAGAAGGGGTCCAACAGGATGCAATGGTTGATCCTGCAGCTGTATTTGGTATGCTTTTCGGAAGCGAAGTCTTTGAAGAATACGTTGGCCAGCTTGCACTTGCTTATTTGGCATCTATCGAAGCTGACTTAGAATCACATGACCCTGAAATCAGAAAGCAAATGCTTCAAGACAAGATCAAAGCTCTTCAAAAGGAGAGGGAAGACAAGCTCGCCGCTACATTGAAAAACAAACTTGAACCCTTTGTGGAAAGACAAACAGATGAATTTATCGAATGGGCAAACGAAGAGGCAAAGCGGCTTTCTTCTGCCGGTTTTGGCGAGGCAATGATGCATACTATTGGTTACATTTACACAAGAAAAGCTGCTAAAGAAATCGGGAAAGACAAGCGATATATGAAAGTACCATTCTTAGCTGAATGGGTGCGTGACAAAGGCCACCATATGAAATCTCAAGTGATGGCTGCTTCTGGTGCGGTTTCGTTACTTCAGTTGCAGGATGAAGTAAACAAGTTGAATGAACACCAAGGAGAGAACAAAGAGGAACATATTCAGAAAGCTATTGAAGCTAAAATGGATGCTTTGCTTCAATCTCTTTGGCAAATCAATGTTCTCGACATCGAATCCACGCTATCTCGTGTTTGCCAATCTGTGCTTAAAGATCCAAGTGTTTCGAAGGATGTTCTTCGAGCTCGTGCCATAGGACTGAAGAAACTTGGAACGATCTTCCAGGGTGCTAAGAAGCCGTACACGAGAGGAAGCAGCTTGCGTCGGGAAGCCACCACCGTGAAAATGGACACCGGAGGTTCTTCAAAGGCGACGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ DnaJ-X

Protein Analysis

346

Amino Acids

38.84

Weight (kDa)

7.71

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	6 - 68	1.8e-26	DnaJ domain
DnaJ-X	PF14308	135 - 321	3.4e-57	X-domain of DnaJ-containing

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21510 AT2G21510 AT2G21510 AT2G21510 AT2G21510 AT4G39150 AT4G39150 AT4G39150
fragaria_vesca	FvH4_2g09560 FvH4_2g09560 FvH4_2g09560
malus_domestica	MD05G1061900.v1.1 MD10G1069700.v1.1
prunus_persica	Prupe.8G091300_v2.0.a1 Prupe.8G091300_v2.0.a1 Prupe.8G091300_v2.0.a1 Prupe.8G091300_v2.0.a1
pyrus_communis	pycom05g05330 pycom10g05530
rosa_chinensis	RchiOBHm_Chr6g0265851
rosa_laevigata	RLG00000014153
rosa_multiflora	Rmu_sc0007599.1_g000002
rosa_roxburghii	Rroxscaffold_7G00202300
rosa_rugosa	Rorug06G0020800 Rorug06G0020800 Rorug06G0020800 Rorug06G0020900 Rorug06G0020900 Rorug06G0021000
rosa_samantha	Rh6AG142700 Rh6BG142300 Rh6CG139000 Rh6DG126400
rosa_wichuraiana	Rw6G012310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1037
AccIII	TCCGGA	1 cut(s)	181
AciI	CCGC	3 cut(s)	429, 511, 689
AclWI	GGATC	2 cut(s)	239, 869
AcoI	YGGCCR	1 cut(s)	301
AcsI	RAATTY	1 cut(s)	479
AcuI	CTGAAG	3 cut(s)	36, 686, 941
AcyI	GRCGYC	2 cut(s)	36, 1034
AfaI	GTAC	2 cut(s)	618, 962
AgsI	TTSAA	9 cut(s)	290, 383, 404, 439, 452, 730, 779, 803, 1026
AjnI	CCWGG	2 cut(s)	115, 942
AjuI	GAANNNNNNNTTGG	2 cut(s)	282, 314
AleI	CACNNNNGTG	1 cut(s)	998
Alw21I	GWGCWC	1 cut(s)	907
Alw26I	GTCTC	2 cut(s)	5, 114
AlwI	GGATC	2 cut(s)	239, 869
AlwNI	CAGNNNCTG	1 cut(s)	59
Aor13HI	TCCGGA	1 cut(s)	181
AoxI	GGCC	2 cut(s)	301, 649
ApeKI	GCWGC	6 cut(s)	131, 194, 251, 578, 677, 975
ApoI	RAATTY	1 cut(s)	479
ArsI	GACNNNNNNTTYG	3 cut(s)	207, 239, 1019
Asp700I	GAANNNNTTC	1 cut(s)	762
AspS9I	GGNCC	1 cut(s)	223
AsuHPI	GGTGA	2 cut(s)	16, 167
AsuII	TTCGAA	1 cut(s)	887
AvaII	GGWCC	1 cut(s)	223
BalI	TGGCCA	1 cut(s)	303
BanII	GRGCYC	1 cut(s)	907
BauI	CACGAG	3 cut(s)	849, 906, 964
BbsI	GAAGAC	1 cut(s)	423
Bbv12I	GWGCWC	1 cut(s)	907
BbvI	GCAGC	6 cut(s)	118, 206, 263, 565, 664, 987
BccI	CCATC	1 cut(s)	667
BceAI	ACGGC	1 cut(s)	943
BciT130I	CCWGG	2 cut(s)	117, 944
BcoDI	GTCTC	2 cut(s)	5, 114
BfmI	CTRYAG	1 cut(s)	249
BglII	AGATCT	1 cut(s)	27
BisI	GCNGC	8 cut(s)	132, 195, 252, 429, 512, 579, 678, 976
BlsI	GCNGC	8 cut(s)	133, 196, 253, 430, 513, 580, 679, 977
Bme1390I	CCNGG	2 cut(s)	117, 944
Bme18I	GGWCC	1 cut(s)	223
BmgT120I	GGNCC	1 cut(s)	223
BmiI	GGNNCC	1 cut(s)	224
BmrFI	CCNGG	2 cut(s)	117, 944
BmsI	GCATC	6 cut(s)	37, 46, 223, 335, 534, 781
BpiI	GAAGAC	1 cut(s)	423
BpmI	CTGGAG	1 cut(s)	138
Bpu14I	TTCGAA	1 cut(s)	887
BpuEI	CTTGAG	2 cut(s)	111, 651
BsaHI	GRCGYC	2 cut(s)	36, 1034
BsaI	GGTCTC	1 cut(s)	114
BsaJI	CCNNGG	3 cut(s)	115, 739, 943
BsaWI	WCCGGW	2 cut(s)	181, 1013
Bse118I	RCCGGY	1 cut(s)	524
Bse3DI	GCAATG	2 cut(s)	243, 546
BseAI	TCCGGA	1 cut(s)	181
BseBI	CCWGG	2 cut(s)	117, 944
BseDI	CCNNGG	3 cut(s)	115, 739, 943
BseGI	GGATG	5 cut(s)	100, 238, 718, 796, 898
BseMI	GCAATG	2 cut(s)	243, 546
BseMII	CTCAG	1 cut(s)	51
BseXI	GCAGC	6 cut(s)	118, 206, 263, 565, 664, 987
BshFI	GGCC	2 cut(s)	303, 651
BsiHKAI	GWGCWC	1 cut(s)	907
BsiSI	CCGG	3 cut(s)	182, 525, 1014
BsmAI	GTCTC	2 cut(s)	5, 114
BsnI	GGCC	2 cut(s)	303, 651
Bso31I	GGTCTC	1 cut(s)	114
Bsp119I	TTCGAA	1 cut(s)	887
Bsp1286I	GDGCHC	1 cut(s)	907
Bsp13I	TCCGGA	1 cut(s)	181
Bsp143I	GATC	5 cut(s)	27, 244, 390, 874, 936
BspACI	CCGC	3 cut(s)	429, 511, 689
BspANI	GGCC	2 cut(s)	303, 651
BspCNI	CTCAG	1 cut(s)	52
BspEI	TCCGGA	1 cut(s)	181
BspLI	GGNNCC	1 cut(s)	224
BspMAI	CTGCAG	1 cut(s)	253
BspPI	GGATC	2 cut(s)	239, 869
BspQI	GCTCTTC	1 cut(s)	405
BspT104I	TTCGAA	1 cut(s)	887
BspTNI	GGTCTC	1 cut(s)	114
BsrDI	GCAATG	2 cut(s)	243, 546
BsrFI	RCCGGY	1 cut(s)	524
BssAI	RCCGGY	1 cut(s)	524
BssECI	CCNNGG	3 cut(s)	115, 739, 943
BssMI	GATC	5 cut(s)	27, 244, 390, 874, 936
BssNI	GRCGYC	2 cut(s)	36, 1034
BssSI	CACGAG	3 cut(s)	849, 906, 964
BssT1I	CCWWGG	1 cut(s)	739
Bst2BI	CACGAG	3 cut(s)	849, 906, 964
Bst2UI	CCWGG	2 cut(s)	117, 944
Bst4CI	ACNGT	1 cut(s)	1000
Bst6I	CTCTTC	2 cut(s)	405, 495
BstACI	GRCGYC	2 cut(s)	36, 1034
BstBI	TTCGAA	1 cut(s)	887
BstC8I	GCNNGC	5 cut(s)	192, 305, 309, 426, 980
BstDEI	CTNAG	6 cut(s)	31, 60, 173, 343, 625, 951
BstF5I	GGATG	5 cut(s)	100, 238, 718, 796, 898
BstKTI	GATC	5 cut(s)	30, 247, 393, 877, 939
BstMAI	GTCTC	2 cut(s)	5, 114
BstMBI	GATC	5 cut(s)	27, 244, 390, 874, 936
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 323, 686, 779
BstNI	CCWGG	2 cut(s)	117, 944
BstSCI	CCNGG	2 cut(s)	115, 942
BstSFI	CTRYAG	1 cut(s)	249
BstV1I	GCAGC	6 cut(s)	118, 206, 263, 565, 664, 987
BstV2I	GAAGAC	1 cut(s)	423
BstX2I	RGATCY	2 cut(s)	27, 874
BstYI	RGATCY	2 cut(s)	27, 874
BsuRI	GGCC	2 cut(s)	303, 651
BtsCI	GGATG	5 cut(s)	100, 238, 718, 796, 898
Cac8I	GCNNGC	5 cut(s)	192, 305, 309, 426, 980
CaiI	CAGNNNCTG	1 cut(s)	59
Cfr10I	RCCGGY	1 cut(s)	524
Cfr13I	GGNCC	1 cut(s)	223
CseI	GACGC	2 cut(s)	25, 971
Csp6I	GTAC	2 cut(s)	617, 961
CviAII	CATG	1 cut(s)	353
CviQI	GTAC	2 cut(s)	617, 961
DdeI	CTNAG	6 cut(s)	31, 60, 173, 343, 625, 951
DpnI	GATC	5 cut(s)	29, 246, 392, 876, 938
DpnII	GATC	5 cut(s)	27, 244, 390, 874, 936
EaeI	YGGCCR	1 cut(s)	301
Eam1104I	CTCTTC	2 cut(s)	405, 495
EarI	CTCTTC	2 cut(s)	405, 495
Ecl136II	GAGCTC	1 cut(s)	905
Eco130I	CCWWGG	1 cut(s)	739
Eco24I	GRGCYC	1 cut(s)	907
Eco31I	GGTCTC	1 cut(s)	114
Eco47I	GGWCC	1 cut(s)	223
Eco53kI	GAGCTC	1 cut(s)	905
Eco57I	CTGAAG	3 cut(s)	36, 686, 941
EcoICRI	GAGCTC	1 cut(s)	905
EcoRII	CCWGG	2 cut(s)	115, 942
EcoT14I	CCWWGG	1 cut(s)	739
EcoT22I	ATGCAT	1 cut(s)	549
EcoT38I	GRGCYC	1 cut(s)	907
ErhI	CCWWGG	1 cut(s)	739
FaeI	CATG	1 cut(s)	356
FatI	CATG	1 cut(s)	352
FauNDI	CATATG	1 cut(s)	657
Fnu4HI	GCNGC	8 cut(s)	132, 195, 252, 429, 512, 579, 678, 976
FokI	GGATG	5 cut(s)	87, 245, 725, 803, 905
FriOI	GRGCYC	1 cut(s)	907
Fsp4HI	GCNGC	8 cut(s)	132, 195, 252, 429, 512, 579, 678, 976
GluI	GCNGC	8 cut(s)	132, 195, 252, 429, 512, 579, 678, 976
GsuI	CTGGAG	1 cut(s)	138
HaeIII	GGCC	2 cut(s)	303, 651
HapII	CCGG	3 cut(s)	182, 525, 1014
HgaI	GACGC	2 cut(s)	25, 971
Hin1I	GRCGYC	2 cut(s)	36, 1034
Hin1II	CATG	1 cut(s)	356
HinfI	GANTC	2 cut(s)	347, 836
HpaII	CCGG	3 cut(s)	182, 525, 1014
HphI	GGTGA	2 cut(s)	16, 167
Hpy166II	GTNNAC	2 cut(s)	721, 963
Hpy188I	TCNGA	4 cut(s)	55, 275, 368, 768
Hpy188III	TCNNGA	7 cut(s)	104, 182, 383, 592, 827, 986, 1038
Hpy8I	GTNNAC	2 cut(s)	721, 963
Hpy99I	CGWCG	2 cut(s)	987, 1036
HpyAV	CCTTC	2 cut(s)	212, 883
HpyCH4III	ACNGT	1 cut(s)	1000
HpyCH4IV	ACGT	2 cut(s)	297, 1034
HpyCH4V	TGCA	5 cut(s)	236, 251, 311, 547, 709
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 323, 686, 779
HpyF3I	CTNAG	6 cut(s)	31, 60, 173, 343, 625, 951
HpySE526I	ACGT	2 cut(s)	297, 1034
Hsp92I	GRCGYC	2 cut(s)	36, 1034
Hsp92II	CATG	1 cut(s)	356
Kpn2I	TCCGGA	1 cut(s)	181
Kzo9I	GATC	5 cut(s)	27, 244, 390, 874, 936
LguI	GCTCTTC	1 cut(s)	405
Lsp1109I	GCAGC	6 cut(s)	118, 206, 263, 565, 664, 987
LweI	GCATC	6 cut(s)	37, 46, 223, 335, 534, 781
MaeII	ACGT	2 cut(s)	297, 1034
MaeIII	GTNAC	3 cut(s)	557, 641, 696
MalI	GATC	5 cut(s)	29, 246, 392, 876, 938
MboI	GATC	5 cut(s)	27, 244, 390, 874, 936
MboII	GAAGA	9 cut(s)	302, 392, 428, 510, 512, 890, 931, 934, 1014
MflI	RGATCY	2 cut(s)	27, 874
MhlI	GDGCHC	1 cut(s)	907
MlsI	TGGCCA	1 cut(s)	303
MluCI	AATT	1 cut(s)	479
MluNI	TGGCCA	1 cut(s)	303
MmeI	TCCRAC	1 cut(s)	250
MnlI	CCTC	8 cut(s)	135, 151, 405, 496, 529, 748, 962, 1010
Mox20I	TGGCCA	1 cut(s)	303
Mph1103I	ATGCAT	1 cut(s)	549
MroI	TCCGGA	1 cut(s)	181
MroXI	GAANNNNTTC	1 cut(s)	762
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	3 cut(s)	66, 83, 870
MslI	CAYNNNNRTG	1 cut(s)	998
Msp20I	TGGCCA	1 cut(s)	303
MspA1I	CMGCKG	1 cut(s)	254
MspI	CCGG	3 cut(s)	182, 525, 1014
MspR9I	CCNGG	2 cut(s)	117, 944
MvaI	CCWGG	2 cut(s)	117, 944
MwoI	GCNNNNNNNGC	4 cut(s)	56, 323, 686, 779
NdeI	CATATG	1 cut(s)	657
NdeII	GATC	5 cut(s)	27, 244, 390, 874, 936
NlaIII	CATG	1 cut(s)	356
NlaIV	GGNNCC	1 cut(s)	224
NmuCI	GTSAC	1 cut(s)	641
NsiI	ATGCAT	1 cut(s)	549
NspV	TTCGAA	1 cut(s)	887
OliI	CACNNNNGTG	1 cut(s)	998
PciSI	GCTCTTC	1 cut(s)	405
PdmI	GAANNNNTTC	1 cut(s)	762
PfeI	GAWTC	2 cut(s)	347, 836
PkrI	GCNGC	8 cut(s)	133, 196, 253, 430, 513, 580, 679, 977
Psp124BI	GAGCTC	1 cut(s)	907
Psp6I	CCWGG	2 cut(s)	115, 942
PspGI	CCWGG	2 cut(s)	115, 942
PspN4I	GGNNCC	1 cut(s)	224
PspPI	GGNCC	1 cut(s)	223
PstI	CTGCAG	1 cut(s)	253
PstNI	CAGNNNCTG	1 cut(s)	59
PsuI	RGATCY	2 cut(s)	27, 874
PvuII	CAGCTG	1 cut(s)	254
RsaI	GTAC	2 cut(s)	618, 962
RsaNI	GTAC	2 cut(s)	617, 961
RseI	CAYNNNNRTG	1 cut(s)	998
SacI	GAGCTC	1 cut(s)	907
SapI	GCTCTTC	1 cut(s)	405
SaqAI	TTAA	3 cut(s)	66, 83, 870
SatI	GCNGC	8 cut(s)	132, 195, 252, 429, 512, 579, 678, 976
Sau3AI	GATC	5 cut(s)	27, 244, 390, 874, 936
Sau96I	GGNCC	1 cut(s)	223
ScrFI	CCNGG	2 cut(s)	117, 944
SduI	GDGCHC	1 cut(s)	907
SfaNI	GCATC	6 cut(s)	37, 46, 223, 335, 534, 781
SfcI	CTRYAG	1 cut(s)	249
SfuI	TTCGAA	1 cut(s)	887
SinI	GGWCC	1 cut(s)	223
SmiMI	CAYNNNNRTG	1 cut(s)	998
SmlI	CTYRAG	2 cut(s)	126, 666
SmoI	CTYRAG	2 cut(s)	126, 666
Sse9I	AATT	1 cut(s)	479
SsiI	CCGC	3 cut(s)	429, 511, 689
SstI	GAGCTC	1 cut(s)	907
StyD4I	CCNGG	2 cut(s)	115, 942
StyI	CCWWGG	1 cut(s)	739
TaaI	ACNGT	1 cut(s)	1000
TaiI	ACGT	2 cut(s)	300, 1037
TaqI	TCGA	6 cut(s)	333, 486, 828, 834, 887, 901
TasI	AATT	1 cut(s)	479
TauI	GCSGC	2 cut(s)	431, 514
TfiI	GAWTC	2 cut(s)	347, 836
Tru1I	TTAA	3 cut(s)	66, 83, 870
Tru9I	TTAA	3 cut(s)	66, 83, 870
TseFI	GTSAC	1 cut(s)	641
TseI	GCWGC	6 cut(s)	131, 194, 251, 578, 677, 975
Tsp45I	GTSAC	1 cut(s)	641
TspDTI	ATGAA	6 cut(s)	89, 492, 626, 674, 729, 747
VpaK11BI	GGWCC	1 cut(s)	223
XapI	RAATTY	1 cut(s)	479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1003
XmnI	GAANNNNTTC	1 cut(s)	762
ZraI	GACGTC	1 cut(s)	1035
Zsp2I	ATGCAT	1 cut(s)	549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.