AT2G22125

Protein kinase C conserved region 2 (CalB)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0007148
Physical Location & Seq
Forward (+)
9406059 .. 9414578
8520 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22125.1

Sequence Viewer

Length: 6453 bp
ATGACAAGTGCTCTTGGATGGAGATTTCCTTCCACTAATGGAAATGGCCTTGCCCCAAGTGACACGGAGAGAAATGGGGATATGAAGATGCATGATTCAGAGCCCCCAACTCCACATTCAACCACAAAGATGAGTTTGAGAGACCGGACAACCAGCATGGAAGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGCCAAGGTTCATCATCTGCACAAGAAAGAGAATATTGTCTGAAGCAGTTACTGGACCTTATAGAAATGCGTGAGAATGCATTCAGTGCTGTCGGATCACACTCCCAAGCTGTGCCAGTACTTGTCTCTCTTCTCCGATCGGGATCAGTTGGAGTGAAGATACAAGCTGCAACCGTCTTGGGTTCACTCTGCAAGGAGAACGAACTTAGAGTTAAGGTGTTACTTGGGGGATGCATTCCTCCATTGCTTGGTCTTCTCAAGTCCAGTTCAGTCGAAGGGCAGATCGCTGCAGCAAAGACAATCTATGCTGTTTCTGAAGGTGGGGTTAAAGACCATGTTGGATCAAAAATATTTTCCACTGAGGGAGTTGTACCGGTTCTGTGGGACCAATTGCGCAGTGGAAATAAAAAAGGAGAGGTTGATGGTTTGTTAACTGGTGCACTTAAGAACCTTTCTAGTACCACAGAGGGATTTTGGTCTGAGACAATTCGAGCTGGGGGAGTGGATGTACTTGTGAAGCTGCTCACAAGCGGGCAGTCAAGTACACTATCTAATGTCTGCTTCCTTCTTGCGTGTATGATGATGGAAGACGCCTCTGTTTGTTCCAGTGTATTGACTGCAGACATTACAAAACAGCTTCTCAAATTATTAGGATCGGGTAATGAAGCCCCAGTGAGGGCAGAGGCTGCTGCTGCTCTCAAGTCGCTTTCTGCTCAATCTAAGGAAGCAAAGCGGGAAATCGCTAATTCTAATGGTATTCCTGTTTTAATAAATGCAACAATAGCTCCATCTAAAGAATTCATGCAAGGTGAATATGCGCAAGCATTACAAGAAAATGCAATGTGTGCCCTTGCTAATATTTCCGGTGGTTTGTCATATGTCATATCAAGCCTTGGTCAGAGCCTTGAATCTTGCTCTTCGCCTGCTCAGACTGCCGACACCCTTGGGGCTTTAGCTTCAGCATTGATGATATATGATGGCAAGGCAGAAACTACAAGAGCATCAGATCCATTGGTCGTTGAACAGACTCTGCTGAAGCAGTTTAAGCCTCGTCTACCATTCTTGGTGCAAGAACGTACAATTGAAGCACTTGCAAGTTTGTATGGGAATTCCATACTCTCTGTCAAACTTTCCAACTCGGATGCAAAACGTTTGCTTGTTGGTCTAATAACGATGGCGGTGAATGAGGTTCAAGATGAGCTTGTAAAGGCTCTTCTGATGCTGTGTAACCATGAAGGTAGCCTGTGGCAAGCACTACAGGGCCGTGAAGGGATCCAATTGCTAATATCTCTTTTGGGTCTTTCATCCGAACAGCAGCAAGAATGTGCTGTTGCACTTCTTTGCCTTTTGTCTAACGAAAATGATGAAAGCAAGTGGGCCATCACTGCTGCTGGAGGTATACCTCCACTTGTTCAAATTCTAGAGACTGGGTCGGCCAAAGCCAGGGAAGACTCTGCAACTATCCTTAGGAACTTGTGCAATCATAGCGAAGATATACGTGCTTGTGTTGAAAGTGCGGATGCTGTCCCTGCTCTCTTATGGCTACTAAAGAATGGTAGTCCAAATGGTAAAGAAATTGCCGCCAAGACATTGAATCATTTGATTCATAAATCAGATACTGCAACTATCAGTCAGCTTACTGCTTTGCTGACCAGTGATCTACCTGAGTCTAAAATTTACGTTTTGGATGCATTGAAGAGTATGCTTTCTGTGGTCCCATTCAATGACATGCTACGTGAAGGCAGTGCTTCCAATGATGCTATTGAGACAATGATCAAGTTGATGAGCTCTGGTAAAGAAGAAACTCAAGCAAATTCAGCATCAGCTCTTGCAGCTATCTTCCAGAGCAGAAAGGATTTGCGTGAGAGTGCTCTAGCCCTCAAAACTCTCTTGTCGGCCATAAAACTGTTAAATGTGGATTCGGAGAGGATCCTTGTTGAGTCTTGCCGCTGCCTGGCTGCAATTTTACTTTCAATTAAGGAGAATCGCGATGTGGCCATTTCTGCCAGAGAAGCATTGCCTACCATAGTATCTCTAGCCAACTCTTCTGTTCTAGAAGTTGCTGAGCAAGGAATGTGCGCTTTGGCTAATCTTATATTGGACAGTGAAGTGTCAGAGAAGGTCATTGTCGAAGATATCATCTTGTCCGCCACTAGAATCTTACGTGAAGGTACAGTGTCTGGGAAGACACTTGCTGCTGCGGCAATTGCCCGCCTCCTTAGTCGTCGCCGAATTGATTCTGCATTGACAGATTCTGTGAACCGAGCTGGAACAGTGCTTACCTTAGTGTCTCTTCTAGAATCTGCCGATGGAAGATCTGATGCAATATCAGAGGCCCTAGATGCGCTTGCTATATTCTCAAGGTCAGGAGCTAATGGAAATGTAAAACCAGCTTGGGCTGTTTTGGCTGAATCTCCCAACAGTATGGCCCCAATAGTCTCATCTATAGTGAGTGTTGCTAATCCTTCACTACAGGACAAAGCTATTGAAGTTTTGTCAAGACTTTGCCGAGATCAGCCTATTGTTTTGGGAAACATGGTCAACAATGCCAGAGATTGCGTGTCATCTATAGCTAAAAGGGTGATAAATACCAGGGACCCGAAAATAAAAATTGGTGGAGCTGCTATTATTATCTGTGCTGCCAAAGTTGACGACCAGAAGATGATAGAAAATCTGAATGAGACACAATTGTGTGCCAAATTCGTTCAAGCACTTGTGGGGATCCTAGATTCTGTGCAAGATCAGGAAAAGGATGAGAAAGATAAAATCTGCATATGCATTCATCCCAAAGAAAAGGAAGAAGATGAAGAAGAAGAGGCAACAGAAAATAGGGAGGGTTCCACGGGGGCAACAGTTATTTCTGGAGACAATTTAGCCATCTGGTTGCTCTCGGTTCTTTCTTGTCATGATGAAAAGAGCAGAGCAGTAATATTGGAGTCAGAAGGCATTGAGTTGATTACTGACAGAATAGGCAACCGTTTTCTCCAGGCTGATAATGGAGAAGATGCCAACATTTGGGTTTGTGCTTTATTGCTGGCCATACTTTTCCAAGACAGAGAAATCACTCGCGCACATGCAACAATGAAGGCTGTTCCAGTGCTCTCAAATCTTGTGAAGTCAGAGGAATACGCAGACAGATATTTTGCAGCACAAGCTCTAGCTAGTCTTGTCTGTAACGGTAGTCGCGGAACTCTTCTATCTGTTGCAAACTCCGGTGCTGCGGCTGGGTTTATATCATTGCTTGGTTGTTCTGATGATGACATAAAAGAACTTCTGCAGCTGTCGCAGGAGTTCACTTTAGTGCGGTACCCAGACCAGGTTGCCCTTGAAAGGCTTTTCCGAGTTGAAGATATTAGAGTTGGGGCTACTTCTCGAAAGGCGATTCCCTTACTAGTTGAACTTCTTAAACCAATTCCAGACCGCCCCGGTGCTCCTCTACTTTCACTTAATCTTCTAACTCAGCTTGCTGGGGACTGTCCACAAAATATGATTGTCATGGTAGAGTCAGGTGCTCTTGAGGGTCTCTCGAAATATCTTTCCCTTGGACCTCAGGACGAGCAAGAGGAAGCTGCAACAGGTCTTTTAGGCATCTTATTTAGCAGTGCTGAAATTCGAAGGCATGAGTCAGCATTTGGCGCGGTCAGCCAACTTGTAGCTGTTTTGCGTCTAGGTGGAAGGGGGGCAAGGTACAGTGCCGCCAAGGCATTGGATAGTCTCTTTACTGCTGACCATATAAGAAATGCAGAGTCTTCTAGACAAGCTGTTCAGCCATTGGTAGAGATTCTCAACACTGGTTCAGAGAGGGAGCAGCATGCTGCTATTGCTGCACTTGTTAGGTTGTTGAGTGATAATCCATCACGGGCTCTGGCAGTTGCAGATGTGGAGATGAATGCGGTGGATGTTCTCTGCAGGATCCTTTCTTCAAACTATACGATGGAACTGAAGGGAGATGCTGCAGAGCTGTGTTATGTTCTGTTTGCAAATACAAGGATTAGATCTACAGTTGCTGCAGCGCGTTGTGTTGAGCCACTTGTCTCTCTTCTTGTGACTGAGTTCAGCCCTGCTCAGCATTCAGTTGTGCGTGCACTGGACAAGCTTGTCGACGATGAACAACTGGCTGAACTAGTTGCAGCTCATGGCGCTGTGGTACCTCTTGTTGGCCTTCTCTATGGTAAAAACTATGTGCTTCATGAGGCTATATCCAGGGCTCTAGTAAAGTTGGGTAAGGACAGGCCTGCTTGTAAACTGGAAATGGTGAAAGCTGGAGTTATCGACTGCGTACTTGATATTCTCCACGAAGCTCCAGATTTTCTATGTGCTGCGTTTTCAGAACTGCTTCGAATCCTCACAAATAATGCTACTATTGCCAAGGGACAATCTGCTGCGAAAGTGGTGGAGCCACTTTTCCATTTGCTGACGAGGTTGGAGTTTGGAGCTGATGGACAGCACAGTGCTCTGCAAGTTCTGGTAAATATCTTAGAACATCCACAATGCCGCGCTGATTATACACTTACACCGCACCAAGTAATTGAGCCTTTAATTCCGCTACTGGAATCTCCATCCCCAGCAGTCCAGCAGTTGGCAGCTGAGCTTCTATCTCATCTTCTCTACGAGGAGCATCTGCAGAAAGATCCATTAACGCAACTTGCGATTGGTCCTCTAATCCATGTGCTGGGATCCGGCATACACCTATTACAGCAGAGAGCTGTGAAAGCTCTCGTCAGCATTGCTCTAACATGGCCAAATGAAATAGCTAAAGAAGGTGGTGTGAGTGAGCTGTCAAAGGTGATACTGCAAGCTGATCCATCGCTCTCCAATGTGTTATGGGAGTCTGCAGCATCAATTTTGGTTATCATCTTGCAATTTAGCTCCGAATTTTACCTGGAAGTTCCTGTTGCTGTTCTTGTAAGACTGCTTCGTTCTGCATCTGAAAACACCGTGGTTGGTGCACTTAACGCTCTTCTAGTGTTGGAAAGCGATGATGGAACCAGTGCAGAGTCCATGGCTGAAAGTGGTGCCATAGAAGCTCTGCTTGATCTTTTAAGGTCTCATCAGTGTGAGGACACAGCAGCGAGACTGCTCGAGGTACTGCTCAACAACGTGAAGATTAGAGATTCAAAAGCCACCAAGACTGCAATCTTGCCATTGTCTCAGTACCTCTTGGATCCACAAACTCAAGCTCAGCAGGCGCGGTTACTAGCAACTTTGGCCCTTGGTGATCTTTTCCAGAATGAAGCTCTTGCTAGAAGCACCGATGCAGCTTCTGCTTGCCGTGCTTTAGTCAATGTCCTTGAAGAACAACCCACAGAAGAAATGAAAGTAGTTGCTATATGTGCTCTGCAAAATCTCGTCATGTATAGCCGATCTAACAAAAGAGCAGTTGCCGAGGCAGGTGGTGTGCAGGTCGTCTTGGATCTGATCAGTTCCAGTGATCCTGAAACGTCTGTTCAGGCTGCAATGTTCGTAAAACTACTCTTCTCTAATCACACCGTTCAAGAGTACGCATCTAGCGAAACCGTCAGAGCAATAACTGCTGCCATTGAGAAAGACTTATGGGCCACTGGAACCGTGAATGATGAATACCTAAAAGCCTTAAACTCTTTGTTTAACAACTTCCCGCGTCTAAGAGCTACAGAGCCTGCAACACTAAGTATACCACATCTAGTTACATCCCTCAAGACAGGATCAGAAGCAACACAAGAAGCTGCCTTGGATGCATTGTTTCTTCTCAGACAAGCTTGGTCAGCCTGTCCTGCCGAAGTTTCCAGGGCCCAATCAGTTGCTGCTGCAGACGCCATCCCCCTACTTCAGTACCTAATCCAATCAGGTCCACCACGGTTCCAGGAGAAAGCTGAATTCCTCTTGCAGTGTTTGCCAGGTACTCTGGTAGTCACTATCAAACGTGGTAACAACATGAAGCAATCCGTTGGTAACCCGAGTGTGTTCTGCAAGATAACACTCGGCAACAATCCTCCTAGACAGACCAAGGTGATATCGACAGGTCCTAATCCAGAGTGGGACGAGAGCTTCTCATGGTCATTTGAGAGCCCTCCCAAAGGTCAAAAACTCCACATTTCATGCAAGAACAAAAGCAAAATGGGAAAGAGTTCCTTTGGGAAAGTAACGATCCAAATCGATAGGGTGGTGATGCTGGGAGCAGTCGCAGGTGAATATAGTTTGTTACCAGAAAGCAAAAGTGGTCCCAGAAACCTTGAGATAGAATTCCAGTGGTCTAACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008017 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009506 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009832 GO:0009833 GO:0009856 GO:0009898 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010208 GO:0010215 GO:0010330 GO:0010927 GO:0010941 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0022414 GO:0022603 GO:0022607 GO:0030054 GO:0030198 GO:0030243 GO:0030244 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032886 GO:0032989 GO:0032991 GO:0033036 GO:0033043 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0036449 GO:0040007 GO:0042221 GO:0042546 GO:0042742 GO:0042981 GO:0043062 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044706 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048467 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051211 GO:0051239 GO:0051273 GO:0051274 GO:0051301 GO:0051493 GO:0051592 GO:0051641 GO:0051704 GO:0051707 GO:0055028 GO:0055044 GO:0060548 GO:0061458 GO:0061640 GO:0065007 GO:0070507 GO:0070647 GO:0070696 GO:0070726 GO:0070727 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0085029 GO:0090567 GO:0097435 GO:0098542 GO:0098552 GO:0098562 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1902494 GO:1903047 GO:1905421 GO:1990234 GO:1990752 GO:1990778 GO:2000026 GO:2000028 GO:2000067 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm C2

Protein Analysis

2150

Amino Acids

230.7

Weight (kDa)

5.21

Isoelectric Point (pI)

42.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_PUB PF25598 86 - 312 9e-09 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 426 - 602 1.5e-08 ARMC5
ARM_ARMC5 PF24768 1430 - 1592 2.5e-06 ARMC5
ARM_ARMC5 PF24768 1807 - 1977 1e-06 ARMC5
C2 PF00168 2030 - 2124 3.9e-13 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 5591, 6365
AasI GACNNNNNNGTC 1 cut(s) 4307
Acc16I TGCGCA 2 cut(s) 605, 1029
Acc36I ACCTGC 3 cut(s) 5591, 5602, 6365
Acc65I GGTACC 2 cut(s) 3516, 4357
AccB1I GGYRCC 3 cut(s) 3516, 4357, 5225
AccB7I CCANNNNNTGG 4 cut(s) 458, 3225, 4789, 4882
AccI GTMKAC 4 cut(s) 1264, 1609, 4311, 5863
AccII CGCG 8 cut(s) 2199, 3279, 3396, 3848, 4225, 4707, 5401, 5830
AclI AACGTT 1 cut(s) 1360
AcoI YGGCCR 5 cut(s) 1644, 2106, 2205, 3246, 4949
AcuI CTGAAG 6 cut(s) 272, 546, 1152, 1265, 4172, 6002
AcyI GRCGYC 2 cut(s) 801, 6003
AflII CTTAAG 1 cut(s) 653
AgeI ACCGGT 1 cut(s) 583
AhlI ACTAGT 2 cut(s) 3601, 4333
AjuI GAANNNNNNNTTGG 2 cut(s) 100, 132
AleI CACNNNNGTG 2 cut(s) 2899, 3509
Alw44I GTGCAC 3 cut(s) 648, 4293, 5157
Ama87I CYCGRG 2 cut(s) 5291, 6145
ApaI GGGCCC 1 cut(s) 5983
ApaLI GTGCAC 3 cut(s) 648, 4293, 5157
ArsI GACNNNNNNTTYG 2 cut(s) 3335, 3367
AsiGI ACCGGT 1 cut(s) 583
Asp700I GAANNNNTTC 4 cut(s) 290, 2446, 4545, 6316
Asp718I GGTACC 2 cut(s) 3516, 4357
AsuC2I CCSGG 1 cut(s) 3636
AsuHPI GGTGA 9 cut(s) 1031, 1402, 2803, 4477, 5008, 5438, 6211, 6367, 6389
AsuII TTCGAA 2 cut(s) 3823, 4549
AvaI CYCGRG 2 cut(s) 5291, 6145
AvaII GGWCC 9 cut(s) 265, 595, 1924, 2806, 3755, 4865, 6038, 6212, 6410
AxyI CCTNAGG 2 cut(s) 1676, 3759
BaeGI GKGCMC 5 cut(s) 652, 1060, 4297, 5161, 5983
BaeI ACNNNNGTAYC 6 cut(s) 2223, 2256, 6005, 6038, 6081, 6114
BalI TGGCCA 3 cut(s) 2207, 3248, 4951
BamHI GGATCC 6 cut(s) 1482, 2139, 2931, 4122, 4886, 5374
BanI GGYRCC 3 cut(s) 3516, 4357, 5225
BanII GRGCYC 6 cut(s) 105, 2000, 4075, 4420, 5983, 6260
BarI GAAGNNNNNNTAC 4 cut(s) 1407, 1439, 5109, 5141
BbsI GAAGAC 5 cut(s) 455, 804, 1665, 2402, 3951
BceAI ACGGC 2 cut(s) 1458, 5466
BclI TGATCA 2 cut(s) 1983, 5628
BcnI CCSGG 1 cut(s) 3636
BcuI ACTAGT 2 cut(s) 3601, 4333
BfoI RGCGCY 1 cut(s) 4353
BfrI CTTAAG 1 cut(s) 653
BfuAI ACCTGC 3 cut(s) 5591, 5602, 6365
BglI GCCNNNNNGGC 1 cut(s) 3911
BglII AGATCT 2 cut(s) 2525, 4205
BlpI GCTNAGC 4 cut(s) 2274, 4275, 4797, 5391
BmcAI AGTACT 1 cut(s) 330
Bme18I GGWCC 9 cut(s) 265, 595, 1924, 2806, 3755, 4865, 6038, 6212, 6410
BmeT110I CYCGRG 2 cut(s) 5291, 6145
BmrI ACTGGG 2 cut(s) 875, 1647
BmuI ACTGGG 2 cut(s) 875, 1647
BpiI GAAGAC 5 cut(s) 455, 804, 1665, 2402, 3951
BplI GAGNNNNNCTC 4 cut(s) 3719, 3751, 6224, 6256
BpmI CTGGAG 5 cut(s) 1623, 3093, 3179, 4494, 4497
Bpu1102I GCTNAGC 4 cut(s) 2274, 4275, 4797, 5391
Bpu14I TTCGAA 2 cut(s) 3823, 4549
BpuEI CTTGAG 8 cut(s) 452, 893, 2001, 2554, 3746, 5370, 5870, 6443
BpuMI CCSGG 1 cut(s) 3636
Bsa29I ATCGAT 1 cut(s) 6345
BsaAI YACGTR 3 cut(s) 1709, 1946, 2375
BsaBI GATNNNNATC 2 cut(s) 352, 6341
BsaHI GRCGYC 2 cut(s) 801, 6003
BsaI GGTCTC 3 cut(s) 135, 3737, 5262
BsaWI WCCGGW 4 cut(s) 144, 583, 1073, 3422
BsaXI ACNNNNNCTCC 4 cut(s) 702, 732, 979, 1009
Bse118I RCCGGY 1 cut(s) 583
Bse21I CCTNAGG 2 cut(s) 1676, 3759
Bse3DI GCAATG 6 cut(s) 452, 1056, 2225, 3446, 4935, 5673
Bse8I GATNNNNATC 2 cut(s) 352, 6341
BseCI ATCGAT 1 cut(s) 6345
BseJI GATNNNNATC 2 cut(s) 352, 6341
BseMI GCAATG 6 cut(s) 452, 1056, 2225, 3446, 4935, 5673
BseRI GAGGAG 2 cut(s) 3633, 4838
BseSI GKGCMC 5 cut(s) 652, 1060, 4297, 5161, 5983
BseYI CCCAGC 6 cut(s) 704, 3434, 3677, 4774, 4882, 6361
BsgI GTGCAG 4 cut(s) 213, 4020, 5223, 5630
Bsh1236I CGCG 8 cut(s) 2199, 3279, 3396, 3848, 4225, 4707, 5401, 5830
Bsh1285I CGRYCG 1 cut(s) 350
BshNI GGYRCC 3 cut(s) 3516, 4357, 5225
BshTI ACCGGT 1 cut(s) 583
BshVI ATCGAT 1 cut(s) 6345
BsiEI CGRYCG 1 cut(s) 350
BsiHKCI CYCGRG 2 cut(s) 5291, 6145
BsiSI CCGG 6 cut(s) 145, 584, 1074, 3423, 3636, 4890
BslFI GGGAC 9 cut(s) 187, 608, 1721, 1910, 2819, 3695, 4596, 6242, 6396
BsmFI GGGAC 9 cut(s) 187, 608, 1721, 1910, 2819, 3695, 4596, 6242, 6396
BsmI GAATGC 6 cut(s) 290, 292, 444, 2988, 4105, 4279
Bso31I GGTCTC 3 cut(s) 135, 3737, 5262
BsoBI CYCGRG 2 cut(s) 5291, 6145
Bsp119I TTCGAA 2 cut(s) 3823, 4549
Bsp120I GGGCCC 1 cut(s) 5979
Bsp1720I GCTNAGC 4 cut(s) 2274, 4275, 4797, 5391
Bsp19I CCATGG 1 cut(s) 5211
Bsp68I TCGCGA 1 cut(s) 2199
BspDI ATCGAT 1 cut(s) 6345
BspFNI CGCG 8 cut(s) 2199, 3279, 3396, 3848, 4225, 4707, 5401, 5830
BspHI TCATGA 2 cut(s) 3115, 4399
BspMAI CTGCAG 9 cut(s) 502, 832, 3489, 4121, 4168, 4222, 4836, 5047, 6001
BspMI ACCTGC 3 cut(s) 5591, 5602, 6365
BspQI GCTCTTC 3 cut(s) 1132, 1428, 5175
BspT104I TTCGAA 2 cut(s) 3823, 4549
BspT107I GGYRCC 3 cut(s) 3516, 4357, 5225
BspTI CTTAAG 1 cut(s) 653
BspTNI GGTCTC 3 cut(s) 135, 3737, 5262
BsrDI GCAATG 6 cut(s) 452, 1056, 2225, 3446, 4935, 5673
BsrFI RCCGGY 1 cut(s) 583
BssAI RCCGGY 1 cut(s) 583
BssNAI GTATAC 2 cut(s) 1610, 5864
BssNI GRCGYC 2 cut(s) 801, 6003
Bst1107I GTATAC 2 cut(s) 1610, 5864
BstACI GRCGYC 2 cut(s) 801, 6003
BstAFI CTTAAG 1 cut(s) 653
BstAPI GCANNNNNTGC 7 cut(s) 188, 296, 896, 1055, 5474, 5741, 6082
BstBAI YACGTR 3 cut(s) 1709, 1946, 2375
BstBI TTCGAA 2 cut(s) 3823, 4549
BstDSI CCRYGG 4 cut(s) 3051, 5148, 5211, 6044
BstEII GGTNACC 1 cut(s) 6140
BstENI CCTNNNNNAGG 1 cut(s) 6264
BstFNI CGCG 8 cut(s) 2199, 3279, 3396, 3848, 4225, 4707, 5401, 5830
BstH2I RGCGCY 1 cut(s) 4353
BstMCI CGRYCG 1 cut(s) 350
BstNSI RCATGY 3 cut(s) 1942, 3287, 4025
BstPI GGTNACC 1 cut(s) 6140
BstSLI GKGCMC 5 cut(s) 652, 1060, 4297, 5161, 5983
BstUI CGCG 8 cut(s) 2199, 3279, 3396, 3848, 4225, 4707, 5401, 5830
BstV2I GAAGAC 5 cut(s) 455, 804, 1665, 2402, 3951
BstXI CCANNNNNNTGG 2 cut(s) 2635, 3916
BstZ17I GTATAC 2 cut(s) 1610, 5864
Bsu15I ATCGAT 1 cut(s) 6345
Bsu36I CCTNAGG 2 cut(s) 1676, 3759
BsuTUI ATCGAT 1 cut(s) 6345
BtgI CCRYGG 4 cut(s) 3051, 5148, 5211, 6044
BtgZI GCGATG 3 cut(s) 2214, 5001, 5202
BtsI GCAGTG 5 cut(s) 613, 1593, 1960, 3817, 6083
BtuMI TCGCGA 1 cut(s) 2199
BveI ACCTGC 3 cut(s) 5591, 5602, 6365
CciI TCATGA 2 cut(s) 3115, 4399
Cfr10I RCCGGY 1 cut(s) 583
ClaI ATCGAT 1 cut(s) 6345
CseI GACGC 4 cut(s) 809, 3863, 5819, 6011
CsiI ACCWGGT 1 cut(s) 3525
CspAI ACCGGT 1 cut(s) 583
DrdI GACNNNNNNGTC 1 cut(s) 4307
DseDI GACNNNNNNGTC 1 cut(s) 4307
EaeI YGGCCR 5 cut(s) 1644, 2106, 2205, 3246, 4949
EciI GGCGGA 1 cut(s) 2347
Ecl136II GAGCTC 1 cut(s) 1998
Eco147I AGGCCT 1 cut(s) 4444
Eco24I GRGCYC 6 cut(s) 105, 2000, 4075, 4420, 5983, 6260
Eco31I GGTCTC 3 cut(s) 135, 3737, 5262
Eco32I GATATC 2 cut(s) 2347, 6204
Eco47I GGWCC 9 cut(s) 265, 595, 1924, 2806, 3755, 4865, 6038, 6212, 6410
Eco53kI GAGCTC 1 cut(s) 1998
Eco57I CTGAAG 6 cut(s) 272, 546, 1152, 1265, 4172, 6002
Eco81I CCTNAGG 2 cut(s) 1676, 3759
Eco88I CYCGRG 2 cut(s) 5291, 6145
Eco91I GGTNACC 1 cut(s) 6140
EcoICRI GAGCTC 1 cut(s) 1998
EcoNI CCTNNNNNAGG 1 cut(s) 6264
EcoO109I RGGNCCY 4 cut(s) 2545, 2806, 5979, 6212
EcoO65I GGTNACC 1 cut(s) 6140
EcoRI GAATTC 4 cut(s) 1007, 1318, 6065, 6431
EcoRV GATATC 2 cut(s) 2347, 6204
EcoT22I ATGCAT 7 cut(s) 93, 200, 292, 446, 1903, 2990, 5929
EcoT38I GRGCYC 6 cut(s) 105, 2000, 4075, 4420, 5983, 6260
FalI AAGNNNNNCTT 6 cut(s) 1395, 1427, 5226, 5258, 6305, 6337
FaqI GGGAC 9 cut(s) 187, 608, 1721, 1910, 2819, 3695, 4596, 6242, 6396
FauI CCCGC 4 cut(s) 734, 936, 2429, 5835
FauNDI CATATG 2 cut(s) 1087, 2984
FbaI TGATCA 2 cut(s) 1983, 5628
FblI GTMKAC 4 cut(s) 1264, 1609, 4311, 5863
FriOI GRGCYC 6 cut(s) 105, 2000, 4075, 4420, 5983, 6260
FspI TGCGCA 2 cut(s) 605, 1029
GsaI CCCAGC 6 cut(s) 708, 3438, 3681, 4778, 4886, 6365
GsuI CTGGAG 5 cut(s) 1623, 3093, 3179, 4494, 4497
HaeII RGCGCY 1 cut(s) 4353
HapII CCGG 6 cut(s) 145, 584, 1074, 3423, 3636, 4890
HgaI GACGC 4 cut(s) 809, 3863, 5819, 6011
Hin1I GRCGYC 2 cut(s) 801, 6003
HincII GTYRAC 4 cut(s) 642, 2752, 2860, 4312
HindII GTYRAC 4 cut(s) 642, 2752, 2860, 4312
HindIII AAGCTT 2 cut(s) 4304, 5946
HpaI GTTAAC 1 cut(s) 642
HpaII CCGG 6 cut(s) 145, 584, 1074, 3423, 3636, 4890
HphI GGTGA 9 cut(s) 1031, 1402, 2803, 4477, 5008, 5438, 6211, 6367, 6389
Hpy99I CGWCG 2 cut(s) 2439, 4316
HpyCH4IV ACGT 9 cut(s) 1285, 1360, 1708, 1890, 1945, 2374, 5310, 5651, 6112
HpySE526I ACGT 9 cut(s) 1285, 1360, 1708, 1890, 1945, 2374, 5310, 5651, 6112
Hsp92I GRCGYC 2 cut(s) 801, 6003
KflI GGGWCCC 1 cut(s) 2806
KpnI GGTACC 2 cut(s) 3520, 4361
Ksp22I TGATCA 2 cut(s) 1983, 5628
KspAI GTTAAC 1 cut(s) 642
LguI GCTCTTC 3 cut(s) 1132, 1428, 5175
MabI ACCWGGT 1 cut(s) 3525
MaeII ACGT 9 cut(s) 1285, 1360, 1708, 1890, 1945, 2374, 5310, 5651, 6112
MfeI CAATTG 5 cut(s) 599, 1290, 1487, 2415, 2897
MlsI TGGCCA 3 cut(s) 2207, 3248, 4951
MluNI TGGCCA 3 cut(s) 2207, 3248, 4951
MmeI TCCRAC 6 cut(s) 283, 340, 529, 1368, 4614, 5160
Mox20I TGGCCA 3 cut(s) 2207, 3248, 4951
Mph1103I ATGCAT 7 cut(s) 93, 200, 292, 446, 1903, 2990, 5929
MroXI GAANNNNTTC 4 cut(s) 290, 2446, 4545, 6316
MscI TGGCCA 3 cut(s) 2207, 3248, 4951
MslI CAYNNNNRTG 4 cut(s) 128, 2899, 3509, 5265
Msp20I TGGCCA 3 cut(s) 2207, 3248, 4951
MspA1I CMGCKG 4 cut(s) 208, 2160, 3490, 4796
MspCI CTTAAG 1 cut(s) 653
MspI CCGG 6 cut(s) 145, 584, 1074, 3423, 3636, 4890
MunI CAATTG 5 cut(s) 599, 1290, 1487, 2415, 2897
Mva1269I GAATGC 6 cut(s) 290, 292, 444, 2988, 4105, 4279
MvnI CGCG 8 cut(s) 2199, 3279, 3396, 3848, 4225, 4707, 5401, 5830
NciI CCSGG 1 cut(s) 3636
NcoI CCATGG 1 cut(s) 5211
NdeI CATATG 2 cut(s) 1087, 2984
NmeAIII GCCGAG 3 cut(s) 2744, 5620, 6150
NmuCI GTSAC 3 cut(s) 59, 4255, 6100
NruI TCGCGA 1 cut(s) 2199
NsbI TGCGCA 2 cut(s) 605, 1029
NsiI ATGCAT 7 cut(s) 93, 200, 292, 446, 1903, 2990, 5929
NspI RCATGY 3 cut(s) 1942, 3287, 4025
NspV TTCGAA 2 cut(s) 3823, 4549
OliI CACNNNNGTG 2 cut(s) 2899, 3509
PaeI GCATGC 1 cut(s) 4025
PaeR7I CTCGAG 1 cut(s) 5291
PagI TCATGA 2 cut(s) 3115, 4399
PaqCI CACCTGC 2 cut(s) 5591, 6365
PceI AGGCCT 1 cut(s) 4444
PciSI GCTCTTC 3 cut(s) 1132, 1428, 5175
PcsI WCGNNNNNNNCGW 2 cut(s) 4856, 5718
PctI GAATGC 6 cut(s) 290, 292, 444, 2988, 4105, 4279
PdmI GAANNNNTTC 4 cut(s) 290, 2446, 4545, 6316
PflFI GACNNNGTC 1 cut(s) 1639
PflMI CCANNNNNTGG 4 cut(s) 458, 3225, 4789, 4882
PfoI TCCNGGA 1 cut(s) 6051
PinAI ACCGGT 1 cut(s) 583
Ple19I CGATCG 1 cut(s) 350
Ppu21I YACGTR 3 cut(s) 1709, 1946, 2375
PpuMI RGGWCCY 2 cut(s) 2806, 6212
Psp124BI GAGCTC 1 cut(s) 2000
Psp1406I AACGTT 1 cut(s) 1360
Psp5II RGGWCCY 2 cut(s) 2806, 6212
PspEI GGTNACC 1 cut(s) 6140
PspFI CCCAGC 6 cut(s) 704, 3434, 3677, 4774, 4882, 6361
PspOMI GGGCCC 1 cut(s) 5979
PspPPI RGGWCCY 2 cut(s) 2806, 6212
PspXI VCTCGAGB 1 cut(s) 5291
PsrI GAACNNNNNNTAC 2 cut(s) 2473, 2505
PstI CTGCAG 9 cut(s) 502, 832, 3489, 4121, 4168, 4222, 4836, 5047, 6001
PsyI GACNNNGTC 1 cut(s) 1639
PvuI CGATCG 1 cut(s) 350
PvuII CAGCTG 3 cut(s) 208, 3490, 4796
RruI TCGCGA 1 cut(s) 2199
RseI CAYNNNNRTG 4 cut(s) 128, 2899, 3509, 5265
SacI GAGCTC 1 cut(s) 2000
SalI GTCGAC 1 cut(s) 4310
SapI GCTCTTC 3 cut(s) 1132, 1428, 5175
ScaI AGTACT 1 cut(s) 330
SexAI ACCWGGT 1 cut(s) 3525
Sfr274I CTCGAG 1 cut(s) 5291
SfuI TTCGAA 2 cut(s) 3823, 4549
SinI GGWCC 9 cut(s) 265, 595, 1924, 2806, 3755, 4865, 6038, 6212, 6410
SlaI CTCGAG 1 cut(s) 5291
SmiMI CAYNNNNRTG 4 cut(s) 128, 2899, 3509, 5265
SpeI ACTAGT 2 cut(s) 3601, 4333
SphI GCATGC 1 cut(s) 4025
SseBI AGGCCT 1 cut(s) 4444
SspI AATATT 4 cut(s) 245, 561, 1069, 3141
SstI GAGCTC 1 cut(s) 2000
StuI AGGCCT 1 cut(s) 4444
TaiI ACGT 9 cut(s) 1288, 1363, 1711, 1893, 1948, 2377, 5313, 5654, 6115
TatI WGTACW 3 cut(s) 328, 718, 752
TauI GCSGC 6 cut(s) 1793, 2160, 2414, 3434, 3908, 4707
TseFI GTSAC 3 cut(s) 59, 4255, 6100
Tsp45I GTSAC 3 cut(s) 59, 4255, 6100
TspGWI ACGGA 2 cut(s) 80, 6124
Tth111I GACNNNGTC 1 cut(s) 1639
Van91I CCANNNNNTGG 4 cut(s) 458, 3225, 4789, 4882
Vha464I CTTAAG 1 cut(s) 653
VneI GTGCAC 3 cut(s) 648, 4293, 5157
VpaK11BI GGWCC 9 cut(s) 265, 595, 1924, 2806, 3755, 4865, 6038, 6212, 6410
XagI CCTNNNNNAGG 1 cut(s) 6264
XbaI TCTAGA 4 cut(s) 1630, 2263, 2506, 3962
XceI RCATGY 3 cut(s) 1942, 3287, 4025
XcmI CCANNNNNNNNNTGG 2 cut(s) 605, 3203
XhoI CTCGAG 1 cut(s) 5291
XmiI GTMKAC 4 cut(s) 1264, 1609, 4311, 5863
XmnI GAANNNNTTC 4 cut(s) 290, 2446, 4545, 6316
ZrmI AGTACT 1 cut(s) 330
Zsp2I ATGCAT 7 cut(s) 93, 200, 292, 446, 1903, 2990, 5929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.