Rorug02G0197500

Protein kinase C conserved region 2 (CalB)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
18378177 .. 18379232
1056 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0197500.1

Sequence Viewer

Length: 513 bp
ATGAGGTTTTGTTGTTACAATTACACGATGAGCAACGCGATCAAGAGTAGCAAAGGAAGCAGATTCAGCAGGTTCATGAAGGCGCCTATAAGAGTTTTGATTAAGGCGAGGGATTTCTACATCAAGAGCATGACCGAGTGCTCCACTCGATTCGACTATGGTGGCATGGCCATGGGCTGCCCTACTGCCCAAGTCCCGAGTGCTTTGCCAAGAAGCTTCAGCACCAGCTCCGTCAAGTCGTCAAGCAGCAGCAACAATGATGATTACAGAGAGCTCATGAGGGCTGCTTCTGCTAGAAGCACTTTCGCCTATAACAAAAATATGGAGGATCTTGGGAGAAAGCAGCAGATCAATAGTACCGGAGCCAATAATGCGATGATGAATCGTAGTCGCAGCGTTGGAATTGGAAGGATTGATGAAGATAAGGCTTGCGAATTTGGTGAAGAAGATGTCAACAAGAATATGTATCCAAGAAGCAGAAGCTCTGCTGTTGCTAGGAGAACAACGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008017 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009506 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009832 GO:0009833 GO:0009856 GO:0009898 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010208 GO:0010215 GO:0010330 GO:0010927 GO:0010941 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0022414 GO:0022603 GO:0022607 GO:0030054 GO:0030198 GO:0030243 GO:0030244 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032886 GO:0032989 GO:0032991 GO:0033036 GO:0033043 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0036449 GO:0040007 GO:0042221 GO:0042546 GO:0042742 GO:0042981 GO:0043062 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044706 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048467 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051211 GO:0051239 GO:0051273 GO:0051274 GO:0051301 GO:0051493 GO:0051592 GO:0051641 GO:0051704 GO:0051707 GO:0055028 GO:0055044 GO:0060548 GO:0061458 GO:0061640 GO:0065007 GO:0070507 GO:0070647 GO:0070696 GO:0070726 GO:0070727 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0085029 GO:0090567 GO:0097435 GO:0098542 GO:0098552 GO:0098562 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1902494 GO:1903047 GO:1905421 GO:1990234 GO:1990752 GO:1990778 GO:2000026 GO:2000028 GO:2000067 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

170

Amino Acids

19.05

Weight (kDa)

9.89

Isoelectric Point (pI)

63.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 82
AccII CGCG 1 cut(s) 38
AclWI GGATC 1 cut(s) 336
AcoI YGGCCR 1 cut(s) 168
AcsI RAATTY 1 cut(s) 434
AcuI CTGAAG 1 cut(s) 202
AcyI GRCGYC 1 cut(s) 83
AfaI GTAC 1 cut(s) 358
AluBI AGCT 4 cut(s) 216, 228, 274, 483
AluI AGCT 4 cut(s) 216, 228, 274, 483
Alw21I GWGCWC 2 cut(s) 143, 276
AlwI GGATC 1 cut(s) 336
Ama87I CYCGRG 1 cut(s) 196
AoxI GGCC 1 cut(s) 168
ApeKI GCWGC 6 cut(s) 177, 246, 249, 284, 343, 393
ApoI RAATTY 1 cut(s) 434
AspLEI GCGC 1 cut(s) 85
AsuHPI GGTGA 1 cut(s) 452
AvaI CYCGRG 1 cut(s) 196
BalI TGGCCA 1 cut(s) 170
BanI GGYRCC 1 cut(s) 82
BanII GRGCYC 1 cut(s) 276
Bbv12I GWGCWC 2 cut(s) 143, 276
BbvI GCAGC 6 cut(s) 164, 258, 261, 271, 355, 405
BcgI CGANNNNNNTGC 2 cut(s) 187, 221
BciVI GTATCC 1 cut(s) 477
BfaI CTAG 2 cut(s) 294, 495
BfoI RGCGCY 1 cut(s) 86
BfuAI ACCTGC 1 cut(s) 60
BfuI GTATCC 1 cut(s) 477
BisI GCNGC 6 cut(s) 178, 247, 250, 285, 344, 394
BlsI GCNGC 6 cut(s) 179, 248, 251, 286, 345, 395
BmeT110I CYCGRG 1 cut(s) 196
BmiI GGNNCC 2 cut(s) 84, 364
BsaHI GRCGYC 1 cut(s) 83
BsaJI CCNNGG 1 cut(s) 171
BsaWI WCCGGW 1 cut(s) 359
BseDI CCNNGG 1 cut(s) 171
BseXI GCAGC 6 cut(s) 164, 258, 261, 271, 355, 405
Bsh1236I CGCG 1 cut(s) 38
BshFI GGCC 1 cut(s) 170
BshNI GGYRCC 1 cut(s) 82
BsiHKAI GWGCWC 2 cut(s) 143, 276
BsiHKCI CYCGRG 1 cut(s) 196
BsiSI CCGG 1 cut(s) 360
BslFI GGGAC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 179
BsnI GGCC 1 cut(s) 170
BsoBI CYCGRG 1 cut(s) 196
Bsp1286I GDGCHC 2 cut(s) 143, 276
Bsp143I GATC 3 cut(s) 39, 328, 348
Bsp19I CCATGG 1 cut(s) 171
BspANI GGCC 1 cut(s) 170
BspFNI CGCG 1 cut(s) 38
BspHI TCATGA 2 cut(s) 75, 276
BspLI GGNNCC 2 cut(s) 84, 364
BspMI ACCTGC 1 cut(s) 60
BspPI GGATC 1 cut(s) 336
BspT107I GGYRCC 1 cut(s) 82
BssECI CCNNGG 1 cut(s) 171
BssMI GATC 3 cut(s) 39, 328, 348
BssNI GRCGYC 1 cut(s) 83
BssT1I CCWWGG 1 cut(s) 171
BstACI GRCGYC 1 cut(s) 83
BstC8I GCNNGC 1 cut(s) 430
BstDSI CCRYGG 1 cut(s) 171
BstFNI CGCG 1 cut(s) 38
BstH2I RGCGCY 1 cut(s) 86
BstHHI GCGC 1 cut(s) 85
BstKTI GATC 3 cut(s) 42, 331, 351
BstMBI GATC 3 cut(s) 39, 328, 348
BstMWI GCNNNNNNNGC 4 cut(s) 57, 66, 290, 371
BstUI CGCG 1 cut(s) 38
BstV1I GCAGC 6 cut(s) 164, 258, 261, 271, 355, 405
BstX2I RGATCY 1 cut(s) 328
BstYI RGATCY 1 cut(s) 328
BsuI GTATCC 1 cut(s) 477
BsuRI GGCC 1 cut(s) 170
BtgI CCRYGG 1 cut(s) 171
BtgZI GCGATG 1 cut(s) 389
BveI ACCTGC 1 cut(s) 60
Cac8I GCNNGC 1 cut(s) 430
CciI TCATGA 2 cut(s) 75, 276
CfoI GCGC 1 cut(s) 85
Csp6I GTAC 1 cut(s) 357
CviAII CATG 5 cut(s) 76, 130, 166, 172, 277
CviJI RGCY 9 cut(s) 170, 177, 216, 228, 274, 284, 365, 428, 483
CviKI_1 RGCY 9 cut(s) 170, 177, 216, 228, 274, 284, 365, 428, 483
CviQI GTAC 1 cut(s) 357
DinI GGCGCC 1 cut(s) 84
DpnI GATC 3 cut(s) 41, 330, 350
DpnII GATC 3 cut(s) 39, 328, 348
EaeI YGGCCR 1 cut(s) 168
Ecl136II GAGCTC 1 cut(s) 274
Eco130I CCWWGG 1 cut(s) 171
Eco24I GRGCYC 1 cut(s) 276
Eco53kI GAGCTC 1 cut(s) 274
Eco57I CTGAAG 1 cut(s) 202
Eco88I CYCGRG 1 cut(s) 196
EcoICRI GAGCTC 1 cut(s) 274
EcoT14I CCWWGG 1 cut(s) 171
EcoT38I GRGCYC 1 cut(s) 276
EgeI GGCGCC 1 cut(s) 84
EheI GGCGCC 1 cut(s) 84
ErhI CCWWGG 1 cut(s) 171
FaeI CATG 5 cut(s) 79, 133, 169, 175, 280
FaqI GGGAC 1 cut(s) 179
FatI CATG 5 cut(s) 75, 129, 165, 171, 276
Fnu4HI GCNGC 6 cut(s) 178, 247, 250, 285, 344, 394
FriOI GRGCYC 1 cut(s) 276
Fsp4HI GCNGC 6 cut(s) 178, 247, 250, 285, 344, 394
FspBI CTAG 2 cut(s) 294, 495
GlaI GCGC 1 cut(s) 84
GluI GCNGC 6 cut(s) 178, 247, 250, 285, 344, 394
HaeII RGCGCY 1 cut(s) 86
HaeIII GGCC 1 cut(s) 170
HapII CCGG 1 cut(s) 360
HhaI GCGC 1 cut(s) 85
Hin1I GRCGYC 1 cut(s) 83
Hin1II CATG 5 cut(s) 79, 133, 169, 175, 280
Hin6I GCGC 1 cut(s) 83
HinP1I GCGC 1 cut(s) 83
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 1 cut(s) 214
HinfI GANTC 3 cut(s) 63, 150, 382
HpaII CCGG 1 cut(s) 360
HphI GGTGA 1 cut(s) 452
Hpy166II GTNNAC 1 cut(s) 454
Hpy188III TCNNGA 5 cut(s) 43, 76, 124, 196, 277
Hpy8I GTNNAC 1 cut(s) 454
HpyAV CCTTC 2 cut(s) 73, 402
HpyCH4IV ACGT 1 cut(s) 506
HpyF10VI GCNNNNNNNGC 4 cut(s) 57, 66, 290, 371
HpySE526I ACGT 1 cut(s) 506
Hsp92I GRCGYC 1 cut(s) 83
Hsp92II CATG 5 cut(s) 79, 133, 169, 175, 280
HspAI GCGC 1 cut(s) 83
KasI GGCGCC 1 cut(s) 82
Kzo9I GATC 3 cut(s) 39, 328, 348
LmnI GCTCC 3 cut(s) 146, 233, 362
LpnPI CCDG 3 cut(s) 55, 238, 373
Lsp1109I GCAGC 6 cut(s) 164, 258, 261, 271, 355, 405
MaeI CTAG 2 cut(s) 294, 495
MaeII ACGT 1 cut(s) 506
MaeIII GTNAC 1 cut(s) 14
MalI GATC 3 cut(s) 41, 330, 350
MboI GATC 3 cut(s) 39, 328, 348
MboII GAAGA 3 cut(s) 431, 455, 458
MflI RGATCY 1 cut(s) 328
MhlI GDGCHC 2 cut(s) 143, 276
MlsI TGGCCA 1 cut(s) 170
MluCI AATT 3 cut(s) 19, 402, 434
MluNI TGGCCA 1 cut(s) 170
Mly113I GGCGCC 1 cut(s) 83
MmeI TCCRAC 1 cut(s) 379
MnlI CCTC 3 cut(s) 102, 273, 319
Mox20I TGGCCA 1 cut(s) 170
MscI TGGCCA 1 cut(s) 170
MseI TTAA 1 cut(s) 102
MslI CAYNNNNRTG 1 cut(s) 170
Msp20I TGGCCA 1 cut(s) 170
MspI CCGG 1 cut(s) 360
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 4 cut(s) 57, 66, 290, 371
NarI GGCGCC 1 cut(s) 83
NcoI CCATGG 1 cut(s) 171
NdeII GATC 3 cut(s) 39, 328, 348
NlaIII CATG 5 cut(s) 79, 133, 169, 175, 280
NlaIV GGNNCC 2 cut(s) 84, 364
PagI TCATGA 2 cut(s) 75, 276
PfeI GAWTC 3 cut(s) 63, 150, 382
PkrI GCNGC 6 cut(s) 179, 248, 251, 286, 345, 395
PluTI GGCGCC 1 cut(s) 86
Psp124BI GAGCTC 1 cut(s) 276
PspN4I GGNNCC 2 cut(s) 84, 364
PsuI RGATCY 1 cut(s) 328
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 1 cut(s) 170
SacI GAGCTC 1 cut(s) 276
SaqAI TTAA 1 cut(s) 102
SatI GCNGC 6 cut(s) 178, 247, 250, 285, 344, 394
Sau3AI GATC 3 cut(s) 39, 328, 348
SduI GDGCHC 2 cut(s) 143, 276
SetI ASST 7 cut(s) 8, 74, 218, 230, 276, 485, 509
SfoI GGCGCC 1 cut(s) 84
SmiMI CAYNNNNRTG 1 cut(s) 170
Sse9I AATT 3 cut(s) 19, 402, 434
SspDI GGCGCC 1 cut(s) 82
SspMI CTAG 2 cut(s) 294, 495
SstI GAGCTC 1 cut(s) 276
StyI CCWWGG 1 cut(s) 171
TaiI ACGT 1 cut(s) 509
TaqI TCGA 2 cut(s) 148, 153
TaqII GACCGA 1 cut(s) 149
TasI AATT 3 cut(s) 19, 402, 434
TfiI GAWTC 3 cut(s) 63, 150, 382
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TseI GCWGC 6 cut(s) 177, 246, 249, 284, 343, 393
TspDTI ATGAA 4 cut(s) 64, 92, 395, 432
TspGWI ACGGA 1 cut(s) 220
XapI RAATTY 1 cut(s) 434
XspI CTAG 2 cut(s) 294, 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.