Rh2CG260200

Protein kinase C conserved region 2 (CalB)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0007148
Physical Location & Seq
Reverse (-)
27904626 .. 27914752
10127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG260200.1

Sequence Viewer

Length: 6306 bp
ATGGAGGATCCAGATGGGACATTGGCAAGTGTTGCTCAATGCATTGAGCAGCTGCGTCAGAGTTCCTCATCTGTACAAGAGAAGGAGTATTCCTTGAAACAGTTGCTGGAGCTTATTGGAACTCGTGAAAATGCTTTCAGTGCTGTTGGATCTCACTCTCAAGCAGTTCCTGTACTAGTTTCTCTTCTCCGATCAGGATCAGTTGGAGTTAAGATACAAGCTGCTACTGTTTTAGGCTCTCTGTGTAAGGAGAATGAACTAAGGGTGAAAGTCTTGCTTGGGGGATGCATTCCACCATTGCTTGGTCTACTCAGGTCCACCTCAGCAGATGGCCAAATTGCAGCAGCAAAGACCATCTATGCTGTTTCTCAAGGTGGTGCAAGGGATCATGTTGGTTCGAAAATTTTTTCAACTGAAGGAGTTGTGCCAGTGCTTTGGGGGCTGCTACAGAAAGGGATCAAGACTGGTAGCTTGGTTGATAGCTTGTTGACCGGAGCATTAAAGAATCTAGCCACCAGCACTGAGGGTTTCTGGGCTGCAACATTACAAGCTGGAGGAGTGGATATACTAGTGAAGTTGCTCACAACTGGACAGCCAAACACTCAAGCTAACGTGTGCTTCCTTCTTGGATGTATGATGATGGAAGACGCATCTGTTTGCTCTAAGGTGCTGGCTGCAGAGGCTACAAAGCAACTTCTCAAGCTTTTAGGTTCTGGCAATGAAGCTTCTGTTAGAGCAGAAGCTGCAGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAAGCAAGGCGGGAGATAGCTAACTTCAATGGTATTCCTGTGTTGATAAATGCTACAATAGCCCCTTCAAAAGAATTCATGCAGGGTGAGTATGCCCAGGCATTGCAGGAAAATGCCATGTGTGCTTTAGCAAATATTTCTGGTGGTTTGTCATATGTGATCTCAAGTCTTGGTCAAAGCCTTGAATCATGCACTTCACCTGCCCAAATTGCTGATACATTAGGGGCTTTGGCTTCAGCTCTTATGATATATGATAGCAAAGCAGAATCTACCAGAGCATCGGATCCTGTTGTTATTGAGCAGACTTTGGTTTCACAATTCAAGCCTAGCTTACCATTTCTCGTTCAGGAGCGAACCATAGAGGCCCTTGCAAGTTTGTATGGGAATACTGTACTCTCAGTTAAACTCAATAGTTCAGAAGCAAAACGATTGCTTGTAGGTTTGATCACAATGGCAACAAATGAAGTTCAGGATGAGCTTATGAGAGCACTTCTTGCTCTTTGTAATAGTGAAGGAAGTCTATGGCGTGCCCTTCAAGGTCGCGAAGGGGTTCAGCTGTTGATATCACTTCTCGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCACTGCTTTGCCTTCTTTCTAATGAGAATGATGAGAGTAAGTGGGCTATTACTGCTGCTGGTGGCATACCTCCTCTTGTTCAAATTCTAGAGACGGGATCTGCAAAAGCCAAGGAAGATTCAGCATCAATCCTTCGGAACCTCTGCAATCACAGCGAAGATATACGCGCATGTGTTGAAAGTGCTGATGCAGTTCCTGCACTATTGTGGCTTCTGAAGAATGGAAGCCCAAATGGAAAAGAAATTGCAGCAAAGACTTTAAACCATTTAATCCATAAATCTGACACAGCAACCATCAGCCAACTCACTGCATTATTGACCAGTGAACTACCTGAATCTAAGGTATATGTTTTGGATGCTTTAAAAAGTATGCTGTCTGTGGTCCCTCTCAGTGATATATCGCGTGAAGGTAGTGCTGCTAATGATGCAATTGAGACAATGATTAAAATATTAAGCTCAAATAAAGAAGAGACTCAAGCCAAGTCTGCATCAGCTTTAGCTGGAATTTTTGAAGCTAGGAAGGACTTGCGGGAAAGTAGTATTGCTGTTAAAACTCTTTGGTCAGCTGTCAAGTTGCTTAATGTTGAGTCAGGTAATATCCTTGTAGAGGCTTCACGTTGCCTGGCAGCAATATTTCTTTCCATTAAAGAGAACCGGGATGTGGCTGCTGTTGCTAGAGATGTATTATCTCCCTTAGTTGTGCTCGCTAACTCTTCGGTTCTGGAAGTGGCAGAGCTAGCAACATGTGCTTTGGCTAATCTTATTTTGGACAGTGAAGTTTCAGAAACAGCAGTGGCTGAAGACATTATTCTCCCAGCTACTAGAGTTTTGCTTGAAGGTACAGTATCTGGAAAGACCCATGCAGCAGCAGCAATTGCTCGCCTGCTCCACTCTCGCCAAATTGACCATGCCTTAACTGATTGTGTGAATCGTGCCGGAACAGTTCTTGCATTAGTTTCTTTTCTGGAATCTGCTAATCATGGATCTGTTGCCACATCAGGGGCACTAGATGCACTTGCTATTCTGTCCAGGTCAGAACGAGCAAGTGGAGAGAAAAAACCTGCCTGGGCAGTTTTAGCTGAATTCCCGAAAAGCATAATCCCTATAGTTTTATCCATTGCTGATGCAACACCCTTGTTGCAGGATAAAGCTATTGAAATATTGTCAAGACTTTGCAGAGATCAACCTGTTGTACTGGGAGACACTGTTGCTAATGCCTCTGGATGTATACCATCAATTGCCAAAAGGGTGATCAATTCATCAAACTCAAAGGTCAAAATTGGAGGTGCTGCACTCCTTATTTGTGCTGCGAAAGTTAGTCATCAGAGAGTTCTAGAAGATCTTAGTGAATCGAACTTATGTACCCATCTCATTCAATCTCTCGTTGCGATGCTTAATTTTTCGGGAAATATAGGGGGTGGTGAGAAGGACTCTATCAGTATTGATATACATATGAAAGAAGAATTAAAGGATGATGGATCTTCTTTAAGTACAGGAGTTATTGATGGTGTGAATTTAGCTGTATGGCTACTCTCTGTTCTTGCTTGTCATGATGATAAATGCAAAATTGCCATTATGGAGGCTGGTGCTGTGGAAGTCCTCACTGACAGGATCTCATATTGTTTTTCCAATTACTCTCAGATTGATTTTAAAGAAGATAGCAGCATATGGATCTGCACTATGCTGCTAGCGATCTTGTTTCAAGACAGAGATATCATACGAGCACATGCAACCATGAAATCCATACCTGTACTTGCCAATTGGTTGAAGTCAGAGGAGTTAGTCGACAGATATTTTGCTGGACAAGCAATGGCCAGCCTAGTCTGTAATGGTAGCAGGGGGACTCTTTTATCTGTTGCAAATTCTGGAGCAGCGGGTGGACTTATCTCACTACTTGGATGTGCTGATGTTGATATTAGTGACCTATTGGATTTGTCAGAAGAATTTGGTTTAGTGCGTTACCCTGAGCAAGTTGCTCTAGAGAGGCTGTTCAGGGTTGAAGATATAAGGGTTGGTGCTACTTCTAGGAAAGCAATACCTGCACTCGTTGATCTTCTCAAACCAATCCCGGATCGTCCTGGAGCACCATTTTTGGCACTTGGGTTTCTTACTCAGCTCGCAAAGGATTGCCCAGCAAATAAAATAGTTATGGTAGAATCAGGAGCTCTGGAAGCGCTGACCAAGTATCTTTCACTTGGCCCACAAGATGCAACAGAAGAAGCTGCTACAGATCTGTTGGGTCTACTATTTGGTAGTGCTGAAATAAGGAAACACGAATCTGCATTTGGTGCTGTCAATCAACTTGTGGCAGTTTTACGGTTAGGTGGAAGAGCTTCAAGGTACAGTGCTGCTAAAGCATTGGAAAGCTTATTCTCTGCTGACCATATAAGGAATGCAGAAAGTGCTCGACAATCTGTCCAACCCTTGGTGGAGATTCTTAATACTGGTGCTGAGAAGGAGCAGCATGCTGCGATTGCTGCATTGGTTAGGCTGCTTAGTGAAAATCCATCAAGAGCCTTAGCAGTTGCAGACGTTGAAATGAATGCAGTGGATGTTCTTTGCAGGATCCTTTCATCAAATTGTTCGATGGAACTGAAAGGAGATGCTGCTGAGTTGTGTTGTGTTCTCTTTGGAAATACAAGAATCAGGTCAACAATGGCTGCAGCTCGATGTGTTGAGCCTCTGGTGTCTCTTCTTGTTACCGAGTTCAGCCCTGCACAACATTCAGTTGTCCGTGCCTTGGATAAACTTGTTGACGATGAACAACTGGGCGAACTCGTTGCTGCTCATGGTGCAGTTATTCCTCTTGTTGGTCTTCTCTATGGTAAGAATTACTTGCTTCATGAGGCTATTTCCAGAGCTCTGGTGAAATTAGGGAAAGACAGACCTGCTTGTAAATCGGAGATGGTGAAAGCCGGTGTTATTGAGAGCATACTTGACATCCTCCATGAAGCACCCGATTTTCTCTGTGCTGCTTTTGCAGAATTGCTCCGAATATTGACCAACAATGCAAGCATTGCTAAGGGCCCTTCTGCTTCAAAAGTGGTTGAGCCGCTTTTCCAGCTTCTAACAAGACCAGAATTTGGACCTGATGGGCAGCACAGTTCATTACAGGTTCTTGTCAATATTTTGGAGCATCCACAGTGTCGTTCTGATTATAGGTTGACATCCCACCAGGCTATTGAACCACTTATTCCCCTACTTGATTCTCCGGCTCCTGCAGTACAACAATTGGCAGCTGAGCTTCTATCACATTTACTCTTTGAAGAACATCTTCAAAAGGATACAGTGATACAGCAAGTGATTGGTCCTCTCATACGGGTTCTTGGCTCTGGTATACATATATTGCAGCAGAGAGCTGTGAAAGCGCTTGTCAGTATTGCGCTAGCATGGCCGAATGAAATTGCAAAAGAAGGTGGTGTCACTGAACTGTCCAAGGTGATATTGCTGTCAGATCCATCTCTTCCAAATGCCCTGTGGGAATCAGCTGCTTCTGTTCTATCAAGCATTCTGCAATTCAGTTCTGAATTTTATTTAGAAGTGCCTGTAGCTGTGTTGGTACGGTTGCTTCGCTCTGGATCAGAAGGCACCGTAGTTGGTGCATTGAATGCTCTTTTGGTACTGGAAACTGATGATGCTACCAGCGCAGAAGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTTTTGGACCTTCTAAGATCTCATCAGTGTGAAGAAACAGCTGCAAGGCTGTTGGAAGTATTGTTGAATAATGTAAAGATCAGAGAAACTAAGGCTACCAAGTCTGCCATATTACCATTGTCTCAGTACCTCTTGGATCCACAAACCCAAGCTCAGCAGGCAAGGTTACTAGCAACTCTAGCTCTTGGTGATTTATTCCAGAATGAGGGGCTTGCCCGTAGTACTGACGCTGTCTCAGCTTGTCGTGCTCTGGTAAATGTGCTTGAAGAGCAACCTACTGAAGAAATGAAAGTTGTAGCAATATGTGCTTTGCAAAACCTTGTGATGTACAGTCGGTCTAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTTCAGGTTGTGTTGGATCTGATTGGTTCAAGTGATCCAGATACGTCCATTCAGGCTGCAATGTTTGTTAAACTTCTCTTTTCAAATCACACCATTCAAGAGTATGCTTCTAGTGAGACAGTAAGGGCGATAACCGCTGCTATTGAAAAGGATTTATGGGCAACTGGAACTGTGAACGATGAGTATCTGAAGGCTCTGAATTCTCTTTTTAGCAATTTCCCACGTTTGAGAGCCACAGAGCCTGCAACTTTAAGCATTCCTCATCTAGTAACATCCCTCAAGACAGGGTCCGAGGCAACTCAAGAAGCTGCGTTGGATGCACTGTTTCTTCTAAGGCAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCTAGGGCTCAGTCAATTGCTGCTGCTGATGCGATCCCTTTGCTGCAATACTTAATTCAGTCTGGCCCACCTCGATTTCAAGAGAAAACAGAATTTTTATTACAATGTTTGCCGGGGACATTGGTGGTCATAATCAAGCGTGGGAATAATATGAAGCAGTCAGTGGGAAACCCCAGTGTATTTTGTAAACTTACACTTGGTAACACTCCACCTAGGCAAACCCAGGTTGTTTCAACTGGCCCTAATCCTGAATGGGATGAGAGCTTTTCTTGGTCCTTTGAGAGTCCCCCTAAAGGCCAGAAGCTCCACATATCTTGCAAGAACAAGAGCAAGATGGGAAAGAGTTCATTTGGAAAGGTAACTATCCAGATCGATCGAGTAGTAATGCTGGGAGCAGTTGCTGGGGAGTACACCCTATTGCCAGAAAGCAAAAGCGGACCCTCCCGGAATTTAGAAATAGAATTCCAGTGGTCTAACAAAGTAACAAGTAACGACCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008017 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009506 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009832 GO:0009833 GO:0009856 GO:0009898 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010208 GO:0010215 GO:0010330 GO:0010927 GO:0010941 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0022414 GO:0022603 GO:0022607 GO:0030054 GO:0030198 GO:0030243 GO:0030244 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032886 GO:0032989 GO:0032991 GO:0033036 GO:0033043 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0036449 GO:0040007 GO:0042221 GO:0042546 GO:0042742 GO:0042981 GO:0043062 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044706 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048467 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051211 GO:0051239 GO:0051273 GO:0051274 GO:0051301 GO:0051493 GO:0051592 GO:0051641 GO:0051704 GO:0051707 GO:0055028 GO:0055044 GO:0060548 GO:0061458 GO:0061640 GO:0065007 GO:0070507 GO:0070647 GO:0070696 GO:0070726 GO:0070727 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0085029 GO:0090567 GO:0097435 GO:0098542 GO:0098552 GO:0098562 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1902494 GO:1903047 GO:1905421 GO:1990234 GO:1990752 GO:1990778 GO:2000026 GO:2000028 GO:2000067 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm C2

Protein Analysis

2101

Amino Acids

223.93

Weight (kDa)

5.3

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_PUB PF25598 13 - 261 8.5e-10 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 375 - 551 2e-09 ARMC5
C2 PF00168 1974 - 2068 6.8e-12 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 737, 988
Acc36I ACCTGC 5 cut(s) 737, 988, 2458, 3436, 4285
AccB1I GGYRCC 2 cut(s) 4976, 5057
AccB7I CCANNNNNTGG 3 cut(s) 302, 3814, 4472
AccI GTMKAC 5 cut(s) 307, 2617, 3174, 3631, 4726
AccII CGCG 3 cut(s) 1323, 1557, 1792
AciI CCGC 6 cut(s) 790, 1918, 3263, 4442, 5574, 6240
AcoI YGGCCR 3 cut(s) 331, 3201, 4781
AcuI CTGAAG 7 cut(s) 435, 999, 1625, 2208, 5370, 5648, 5820
AfeI AGCGCT 2 cut(s) 3564, 4758
AflIII ACRYGT 2 cut(s) 612, 2132
AhdI GACNNNNNGTC 1 cut(s) 3803
AhlI ACTAGT 2 cut(s) 175, 568
AjnI CCWGG 7 cut(s) 876, 2010, 2417, 2453, 3466, 4563, 6027
AjuI GAANNNNNNNTTGG 4 cut(s) 3657, 3689, 4988, 5020
AleI CACNNNNGTG 1 cut(s) 1594
Alw21I GWGCWC 9 cut(s) 754, 1270, 2094, 3115, 3475, 3556, 3796, 4252, 5320
Alw26I GTCTC 8 cut(s) 1475, 1817, 1853, 2583, 4083, 5196, 5308, 5549
AlwNI CAGNNNCTG 9 cut(s) 106, 170, 743, 1586, 2186, 2237, 5426, 5681, 6206
Ama87I CYCGRG 1 cut(s) 1352
Aor51HI AGCGCT 2 cut(s) 3564, 4758
AoxI GGCC 9 cut(s) 331, 1143, 3201, 3586, 4414, 4781, 5869, 6043, 6100
ApaI GGGCCC 1 cut(s) 4418
ArsI GACNNNNNNTTYG 2 cut(s) 3167, 3199
Asp700I GAANNNNTTC 4 cut(s) 1329, 3721, 4662, 6148
AspA2I CCTAGG 1 cut(s) 6017
AspLEI GCGC 5 cut(s) 1559, 3565, 4759, 4774, 5036
AsuC2I CCSGG 4 cut(s) 2045, 3458, 5919, 6250
AsuHPI GGTGA 9 cut(s) 277, 878, 969, 2650, 2822, 4267, 4309, 4840, 5270
AsuII TTCGAA 1 cut(s) 398
AsuNHI GCTAGC 3 cut(s) 2125, 3076, 4774
AvaI CYCGRG 1 cut(s) 1352
AvaII GGWCC 8 cut(s) 315, 1771, 4475, 4697, 5077, 5727, 6078, 6242
AvrII CCTAGG 1 cut(s) 6017
BaeGI GKGCMC 3 cut(s) 1312, 2395, 4418
BaeI ACNNNNGTAYC 2 cut(s) 2734, 2767
BalI TGGCCA 2 cut(s) 333, 3203
BamHI GGATCC 4 cut(s) 7, 1063, 3954, 5206
BanI GGYRCC 2 cut(s) 4976, 5057
BanII GRGCYC 4 cut(s) 3556, 4252, 4418, 5815
BarI GAAGNNNNNNTAC 2 cut(s) 4941, 4973
BauI CACGAG 1 cut(s) 123
BbsI GAAGAC 3 cut(s) 651, 2196, 4196
Bbv12I GWGCWC 9 cut(s) 754, 1270, 2094, 3115, 3475, 3556, 3796, 4252, 5320
BbvCI CCTCAGC 2 cut(s) 322, 5427
BcgI CGANNNNNNTGC 4 cut(s) 4151, 4185, 5827, 5861
BciT130I CCWGG 7 cut(s) 878, 2012, 2419, 2455, 3468, 4565, 6029
BciVI GTATCC 1 cut(s) 4666
BclI TGATCA 2 cut(s) 1224, 2640
BcnI CCSGG 4 cut(s) 2045, 3458, 5919, 6250
BcoDI GTCTC 8 cut(s) 1475, 1817, 1853, 2583, 4083, 5196, 5308, 5549
BcuI ACTAGT 2 cut(s) 175, 568
BfmI CTRYAG 8 cut(s) 446, 675, 744, 2493, 3615, 4050, 4608, 4935
BfoI RGCGCY 2 cut(s) 3566, 4760
BfuAI ACCTGC 5 cut(s) 737, 988, 2458, 3436, 4285
BfuI GTATCC 1 cut(s) 4666
BglI GCCNNNNNGGC 1 cut(s) 5066
BglII AGATCT 3 cut(s) 2728, 3619, 5087
BlnI CCTAGG 1 cut(s) 6017
BlpI GCTNAGC 2 cut(s) 4629, 5223
BmcAI AGTACT 1 cut(s) 5293
Bme18I GGWCC 8 cut(s) 315, 1771, 4475, 4697, 5077, 5727, 6078, 6242
BmeRI GACNNNNNGTC 1 cut(s) 3803
BmeT110I CYCGRG 1 cut(s) 1352
BmrI ACTGGG 4 cut(s) 766, 2594, 4166, 5973
BmtI GCTAGC 3 cut(s) 2129, 3080, 4778
BmuI ACTGGG 4 cut(s) 766, 2594, 4166, 5973
BpiI GAAGAC 3 cut(s) 651, 2196, 4196
BplI GAGNNNNNCTC 2 cut(s) 2804, 2836
BpmI CTGGAG 4 cut(s) 128, 573, 3276, 3489
Bpu10I CCTNAGC 5 cut(s) 322, 3354, 3907, 4410, 5427
Bpu1102I GCTNAGC 2 cut(s) 4629, 5223
Bpu14I TTCGAA 1 cut(s) 398
BpuEI CTTGAG 8 cut(s) 144, 354, 588, 683, 928, 1848, 5702, 5724
BpuMI CCSGG 4 cut(s) 2045, 3458, 5919, 6250
Bsa29I ATCGAT 1 cut(s) 6177
BsaBI GATNNNNATC 2 cut(s) 196, 5622
BsaWI WCCGGW 1 cut(s) 491
BsaXI ACNNNNNCTCC 2 cut(s) 2580, 2610
Bse118I RCCGGY 1 cut(s) 4304
Bse3DI GCAATG 8 cut(s) 296, 724, 881, 2505, 3204, 4404, 5049, 5505
Bse8I GATNNNNATC 2 cut(s) 196, 5622
BseBI CCWGG 7 cut(s) 878, 2012, 2419, 2455, 3468, 4565, 6029
BseCI ATCGAT 1 cut(s) 6177
BseJI GATNNNNATC 2 cut(s) 196, 5622
BseMI GCAATG 8 cut(s) 296, 724, 881, 2505, 3204, 4404, 5049, 5505
BseRI GAGGAG 3 cut(s) 570, 1452, 3179
BseSI GKGCMC 3 cut(s) 1312, 2395, 4418
BseYI CCCAGC 5 cut(s) 2203, 3520, 5794, 6193, 6206
BsgI GTGCAG 7 cut(s) 1404, 1572, 2664, 3049, 3414, 4089, 4203
Bsh1236I CGCG 3 cut(s) 1323, 1557, 1792
Bsh1285I CGRYCG 1 cut(s) 6181
BshFI GGCC 9 cut(s) 333, 1145, 3203, 3588, 4416, 4783, 5871, 6045, 6102
BshNI GGYRCC 2 cut(s) 4976, 5057
BshVI ATCGAT 1 cut(s) 6177
BsiEI CGRYCG 1 cut(s) 6181
BsiHKAI GWGCWC 9 cut(s) 754, 1270, 2094, 3115, 3475, 3556, 3796, 4252, 5320
BsiHKCI CYCGRG 1 cut(s) 1352
BsiSI CCGG 8 cut(s) 492, 2044, 2325, 3458, 4305, 4601, 5918, 6250
BslFI GGGAC 5 cut(s) 31, 1757, 3244, 5935, 6075
BsmAI GTCTC 8 cut(s) 1475, 1817, 1853, 2583, 4083, 5196, 5308, 5549
BsmBI CGTCTC 1 cut(s) 1475
BsmFI GGGAC 5 cut(s) 31, 1757, 3244, 5935, 6075
BsmI GAATGC 6 cut(s) 288, 3787, 3937, 4896, 5002, 5694
BsnI GGCC 9 cut(s) 333, 1145, 3203, 3588, 4416, 4783, 5871, 6045, 6102
BsoBI CYCGRG 1 cut(s) 1352
Bsp119I TTCGAA 1 cut(s) 398
Bsp120I GGGCCC 1 cut(s) 4414
Bsp1407I TGTACA 2 cut(s) 73, 5397
Bsp1720I GCTNAGC 2 cut(s) 4629, 5223
Bsp68I TCGCGA 1 cut(s) 1323
BspACI CCGC 6 cut(s) 790, 1918, 3263, 4442, 5574, 6240
BspANI GGCC 9 cut(s) 333, 1145, 3203, 3588, 4416, 4783, 5871, 6045, 6102
BspDI ATCGAT 1 cut(s) 6177
BspFNI CGCG 3 cut(s) 1323, 1557, 1792
BspHI TCATGA 2 cut(s) 2938, 4231
BspMAI CTGCAG 4 cut(s) 679, 748, 4054, 4612
BspMI ACCTGC 5 cut(s) 737, 988, 2458, 3436, 4285
BspOI GCTAGC 3 cut(s) 2129, 3080, 4778
BspQI GCTCTTC 2 cut(s) 3712, 5331
BspT104I TTCGAA 1 cut(s) 398
BspT107I GGYRCC 2 cut(s) 4976, 5057
BsrDI GCAATG 8 cut(s) 296, 724, 881, 2505, 3204, 4404, 5049, 5505
BsrFI RCCGGY 1 cut(s) 4304
BsrGI TGTACA 2 cut(s) 73, 5397
BssAI RCCGGY 1 cut(s) 4304
BssNAI GTATAC 2 cut(s) 2618, 4727
BssSI CACGAG 1 cut(s) 123
BssT1I CCWWGG 5 cut(s) 1500, 3813, 4128, 4824, 6017
Bst1107I GTATAC 2 cut(s) 2618, 4727
Bst2BI CACGAG 1 cut(s) 123
Bst2UI CCWGG 7 cut(s) 878, 2012, 2419, 2455, 3468, 4565, 6029
Bst6I CTCTTC 7 cut(s) 189, 1851, 2107, 3712, 4086, 4857, 5331
BstAUI TGTACA 2 cut(s) 73, 5397
BstBI TTCGAA 1 cut(s) 398
BstENI CCTNNNNNAGG 1 cut(s) 1994
BstFNI CGCG 3 cut(s) 1323, 1557, 1792
BstH2I RGCGCY 2 cut(s) 3566, 4760
BstHHI GCGC 5 cut(s) 1559, 3565, 4759, 4774, 5036
BstMAI GTCTC 8 cut(s) 1475, 1817, 1853, 2583, 4083, 5196, 5308, 5549
BstMCI CGRYCG 1 cut(s) 6181
BstNI CCWGG 7 cut(s) 878, 2012, 2419, 2455, 3468, 4565, 6029
BstNSI RCATGY 5 cut(s) 1563, 2136, 3119, 3857, 5793
BstSFI CTRYAG 8 cut(s) 446, 675, 744, 2493, 3615, 4050, 4608, 4935
BstSLI GKGCMC 3 cut(s) 1312, 2395, 4418
BstUI CGCG 3 cut(s) 1323, 1557, 1792
BstV2I GAAGAC 3 cut(s) 651, 2196, 4196
BstXI CCANNNNNNTGG 2 cut(s) 435, 4252
BstZ17I GTATAC 2 cut(s) 2618, 4727
Bsu15I ATCGAT 1 cut(s) 6177
BsuI GTATCC 1 cut(s) 4666
BsuRI GGCC 9 cut(s) 333, 1145, 3203, 3588, 4416, 4783, 5871, 6045, 6102
BsuTUI ATCGAT 1 cut(s) 6177
BtgZI GCGATG 1 cut(s) 2792
BtsI GCAGTG 4 cut(s) 1391, 1695, 2187, 3942
BtuMI TCGCGA 1 cut(s) 1323
BveI ACCTGC 5 cut(s) 737, 988, 2458, 3436, 4285
CaiI CAGNNNCTG 9 cut(s) 106, 170, 743, 1586, 2186, 2237, 5426, 5681, 6206
CciI TCATGA 2 cut(s) 2938, 4231
CfoI GCGC 5 cut(s) 1559, 3565, 4759, 4774, 5036
Cfr10I RCCGGY 1 cut(s) 4304
ClaI ATCGAT 1 cut(s) 6177
CseI GACGC 3 cut(s) 44, 656, 5306
CspCI CAANNNNNGTGG 2 cut(s) 6101, 6136
DraI TTTAAA 3 cut(s) 1650, 1752, 3040
DriI GACNNNNNGTC 1 cut(s) 3803
EaeI YGGCCR 3 cut(s) 331, 3201, 4781
Eam1104I CTCTTC 7 cut(s) 189, 1851, 2107, 3712, 4086, 4857, 5331
Eam1105I GACNNNNNGTC 1 cut(s) 3803
EarI CTCTTC 7 cut(s) 189, 1851, 2107, 3712, 4086, 4857, 5331
Ecl136II GAGCTC 2 cut(s) 3554, 4250
Eco130I CCWWGG 5 cut(s) 1500, 3813, 4128, 4824, 6017
Eco24I GRGCYC 4 cut(s) 3556, 4252, 4418, 5815
Eco32I GATATC 2 cut(s) 1344, 3103
Eco47I GGWCC 8 cut(s) 315, 1771, 4475, 4697, 5077, 5727, 6078, 6242
Eco47III AGCGCT 2 cut(s) 3564, 4758
Eco53kI GAGCTC 2 cut(s) 3554, 4250
Eco57I CTGAAG 7 cut(s) 435, 999, 1625, 2208, 5370, 5648, 5820
Eco88I CYCGRG 1 cut(s) 1352
EcoICRI GAGCTC 2 cut(s) 3554, 4250
EcoNI CCTNNNNNAGG 1 cut(s) 1994
EcoO109I RGGNCCY 3 cut(s) 1144, 4414, 4415
EcoRI GAATTC 4 cut(s) 854, 2471, 5638, 6266
EcoRII CCWGG 7 cut(s) 876, 2010, 2417, 2453, 3466, 4563, 6027
EcoRV GATATC 2 cut(s) 1344, 3103
EcoT14I CCWWGG 5 cut(s) 1500, 3813, 4128, 4824, 6017
EcoT22I ATGCAT 2 cut(s) 44, 290
EcoT38I GRGCYC 4 cut(s) 3556, 4252, 4418, 5815
ErhI CCWWGG 5 cut(s) 1500, 3813, 4128, 4824, 6017
Esp3I CGTCTC 1 cut(s) 1475
FaqI GGGAC 5 cut(s) 31, 1757, 3244, 5935, 6075
FauI CCCGC 3 cut(s) 783, 1911, 3256
FauNDI CATATG 3 cut(s) 934, 2841, 3056
FbaI TGATCA 2 cut(s) 1224, 2640
FblI GTMKAC 5 cut(s) 307, 2617, 3174, 3631, 4726
FriOI GRGCYC 4 cut(s) 3556, 4252, 4418, 5815
GlaI GCGC 5 cut(s) 1558, 3564, 4758, 4773, 5035
GsaI CCCAGC 5 cut(s) 2207, 3524, 5798, 6197, 6210
GsuI CTGGAG 4 cut(s) 128, 573, 3276, 3489
HaeII RGCGCY 2 cut(s) 3566, 4760
HaeIII GGCC 9 cut(s) 333, 1145, 3203, 3588, 4416, 4783, 5871, 6045, 6102
HapII CCGG 8 cut(s) 492, 2044, 2325, 3458, 4305, 4601, 5918, 6250
HgaI GACGC 3 cut(s) 44, 656, 5306
HhaI GCGC 5 cut(s) 1559, 3565, 4759, 4774, 5036
Hin6I GCGC 5 cut(s) 1557, 3563, 4757, 4772, 5034
HinP1I GCGC 5 cut(s) 1557, 3563, 4757, 4772, 5034
HincII GTYRAC 5 cut(s) 489, 3175, 4041, 4144, 4554
HindII GTYRAC 5 cut(s) 489, 3175, 4041, 4144, 4554
HindIII AAGCTT 4 cut(s) 701, 723, 3754, 5778
HpaII CCGG 8 cut(s) 492, 2044, 2325, 3458, 4305, 4601, 5918, 6250
HphI GGTGA 9 cut(s) 277, 878, 969, 2650, 2822, 4267, 4309, 4840, 5270
HpyCH4IV ACGT 5 cut(s) 612, 2005, 3921, 5483, 5662
HpySE526I ACGT 5 cut(s) 612, 2005, 3921, 5483, 5662
HspAI GCGC 5 cut(s) 1557, 3563, 4757, 4772, 5034
Ksp22I TGATCA 2 cut(s) 1224, 2640
LguI GCTCTTC 2 cut(s) 3712, 5331
MaeII ACGT 5 cut(s) 612, 2005, 3921, 5483, 5662
MfeI CAATTG 6 cut(s) 1818, 2262, 2625, 3148, 4619, 5820
MlsI TGGCCA 2 cut(s) 333, 3203
MluNI TGGCCA 2 cut(s) 333, 3203
MlyI GAGTC 5 cut(s) 1855, 1985, 2813, 3226, 6097
MmeI TCCRAC 6 cut(s) 127, 184, 3832, 5103, 5433, 5733
Mox20I TGGCCA 2 cut(s) 333, 3203
Mph1103I ATGCAT 2 cut(s) 44, 290
MroXI GAANNNNTTC 4 cut(s) 1329, 3721, 4662, 6148
MscI TGGCCA 2 cut(s) 333, 3203
MslI CAYNNNNRTG 2 cut(s) 1594, 5097
Msp20I TGGCCA 2 cut(s) 333, 3203
MspA1I CMGCKG 9 cut(s) 52, 1336, 1955, 3263, 4628, 4877, 5111, 5576, 5798
MspI CCGG 8 cut(s) 492, 2044, 2325, 3458, 4305, 4601, 5918, 6250
MunI CAATTG 6 cut(s) 1818, 2262, 2625, 3148, 4619, 5820
Mva1269I GAATGC 6 cut(s) 288, 3787, 3937, 4896, 5002, 5694
MvaI CCWGG 7 cut(s) 878, 2012, 2419, 2455, 3468, 4565, 6029
MvnI CGCG 3 cut(s) 1323, 1557, 1792
NciI CCSGG 4 cut(s) 2045, 3458, 5919, 6250
NdeI CATATG 3 cut(s) 934, 2841, 3056
NheI GCTAGC 3 cut(s) 2125, 3076, 4774
NmuCI GTSAC 2 cut(s) 3308, 4810
NruI TCGCGA 1 cut(s) 1323
NsiI ATGCAT 2 cut(s) 44, 290
NspI RCATGY 5 cut(s) 1563, 2136, 3119, 3857, 5793
NspV TTCGAA 1 cut(s) 398
OliI CACNNNNGTG 1 cut(s) 1594
PaeI GCATGC 2 cut(s) 3857, 5793
PagI TCATGA 2 cut(s) 2938, 4231
PaqCI CACCTGC 2 cut(s) 737, 988
PciI ACATGT 1 cut(s) 2132
PciSI GCTCTTC 2 cut(s) 3712, 5331
PctI GAATGC 6 cut(s) 288, 3787, 3937, 4896, 5002, 5694
PdmI GAANNNNTTC 4 cut(s) 1329, 3721, 4662, 6148
PflFI GACNNNGTC 2 cut(s) 5300, 5725
PflMI CCANNNNNTGG 3 cut(s) 302, 3814, 4472
PfoI TCCNGGA 3 cut(s) 3456, 3466, 6248
Ple19I CGATCG 1 cut(s) 6181
PleI GAGTC 5 cut(s) 1855, 1984, 2813, 3226, 6096
PpsI GAGTC 5 cut(s) 1855, 1984, 2813, 3226, 6096
PscI ACATGT 1 cut(s) 2132
Psp124BI GAGCTC 2 cut(s) 3556, 4252
Psp6I CCWGG 7 cut(s) 876, 2010, 2417, 2453, 3466, 4563, 6027
PspFI CCCAGC 5 cut(s) 2203, 3520, 5794, 6193, 6206
PspGI CCWGG 7 cut(s) 876, 2010, 2417, 2453, 3466, 4563, 6027
PspOMI GGGCCC 1 cut(s) 4414
PstI CTGCAG 4 cut(s) 679, 748, 4054, 4612
PstNI CAGNNNCTG 9 cut(s) 106, 170, 743, 1586, 2186, 2237, 5426, 5681, 6206
PsyI GACNNNGTC 2 cut(s) 5300, 5725
PvuI CGATCG 1 cut(s) 6181
PvuII CAGCTG 7 cut(s) 52, 1336, 1955, 4628, 4877, 5111, 5798
RruI TCGCGA 1 cut(s) 1323
RseI CAYNNNNRTG 2 cut(s) 1594, 5097
SacI GAGCTC 2 cut(s) 3556, 4252
SalI GTCGAC 1 cut(s) 3173
SapI GCTCTTC 2 cut(s) 3712, 5331
ScaI AGTACT 1 cut(s) 5293
SchI GAGTC 5 cut(s) 1855, 1985, 2813, 3226, 6097
SfcI CTRYAG 8 cut(s) 446, 675, 744, 2493, 3615, 4050, 4608, 4935
SfuI TTCGAA 1 cut(s) 398
SinI GGWCC 8 cut(s) 315, 1771, 4475, 4697, 5077, 5727, 6078, 6242
SmiMI CAYNNNNRTG 2 cut(s) 1594, 5097
SmlI CTYRAG 8 cut(s) 159, 369, 603, 698, 943, 1863, 5717, 5739
SmoI CTYRAG 8 cut(s) 159, 369, 603, 698, 943, 1863, 5717, 5739
SpeI ACTAGT 2 cut(s) 175, 568
SphI GCATGC 2 cut(s) 3857, 5793
SsiI CCGC 6 cut(s) 790, 1918, 3263, 4442, 5574, 6240
SspI AATATT 6 cut(s) 916, 1839, 2022, 2550, 4386, 4516
SstI GAGCTC 2 cut(s) 3556, 4252
StyI CCWWGG 5 cut(s) 1500, 3813, 4128, 4824, 6017
TaiI ACGT 5 cut(s) 615, 2008, 3924, 5486, 5665
TaqI TCGA 9 cut(s) 398, 2741, 3174, 3796, 3974, 4057, 5878, 6177, 6181
TaqII GACCGA 1 cut(s) 5394
TauI GCSGC 1 cut(s) 4444
TseFI GTSAC 2 cut(s) 3308, 4810
Tsp45I GTSAC 2 cut(s) 3308, 4810
TspGWI ACGGA 1 cut(s) 4112
Tth111I GACNNNGTC 2 cut(s) 5300, 5725
Van91I CCANNNNNTGG 3 cut(s) 302, 3814, 4472
VpaK11BI GGWCC 8 cut(s) 315, 1771, 4475, 4697, 5077, 5727, 6078, 6242
XagI CCTNNNNNAGG 1 cut(s) 1994
XbaI TCTAGA 3 cut(s) 1477, 2722, 3367
XceI RCATGY 5 cut(s) 1563, 2136, 3119, 3857, 5793
XcmI CCANNNNNNNNNTGG 1 cut(s) 4863
XmaJI CCTAGG 1 cut(s) 6017
XmiI GTMKAC 5 cut(s) 307, 2617, 3174, 3631, 4726
XmnI GAANNNNTTC 4 cut(s) 1329, 3721, 4662, 6148
ZrmI AGTACT 1 cut(s) 5293
Zsp2I ATGCAT 2 cut(s) 44, 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.