pycom15g29650

Protein kinase C conserved region 2 (CalB)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
26555049 .. 26555549
501 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g29650.3

Sequence Viewer

Length: 267 bp
ATGTTGATTGTGGTTTCAACTGGCCCTAATCCAGAATGGGATGAAAGCTTTTCATGGTCCTTTGAGAGTCCCCCGAAGGGCCAGAAGCTCCACATATCTTGCAAGAACAAGAGCAAAATGGGAAAGAGTTCATTCGGAAAGGTAACCATCCAAATTGATCGCGTAGTAATGCTGGGAGCAGTTGCCGGAGAGTACACTCTGTTGCCAGAAAGCAAAAGTGGGCCCTCACGGAATTTAGAAATAGAGTTCCAGTGGTCTAACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008017 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009506 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009832 GO:0009833 GO:0009856 GO:0009898 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010035 GO:0010038 GO:0010208 GO:0010215 GO:0010330 GO:0010927 GO:0010941 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022402 GO:0022414 GO:0022603 GO:0022607 GO:0030054 GO:0030198 GO:0030243 GO:0030244 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032886 GO:0032989 GO:0032991 GO:0033036 GO:0033043 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0036449 GO:0040007 GO:0042221 GO:0042546 GO:0042742 GO:0042981 GO:0043062 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044706 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048467 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051179 GO:0051211 GO:0051239 GO:0051273 GO:0051274 GO:0051301 GO:0051493 GO:0051592 GO:0051641 GO:0051704 GO:0051707 GO:0055028 GO:0055044 GO:0060548 GO:0061458 GO:0061640 GO:0065007 GO:0070507 GO:0070647 GO:0070696 GO:0070726 GO:0070727 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0085029 GO:0090567 GO:0097435 GO:0098542 GO:0098552 GO:0098562 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1902494 GO:1903047 GO:1905421 GO:1990234 GO:1990752 GO:1990778 GO:2000026 GO:2000028 GO:2000067 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

89

Amino Acids

9.8

Weight (kDa)

8.82

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 162
AcsI RAATTY 1 cut(s) 232
AfaI GTAC 1 cut(s) 194
AfiI CCNNNNNNNGG 1 cut(s) 77
AgsI TTSAA 1 cut(s) 18
AluBI AGCT 2 cut(s) 48, 88
AluI AGCT 2 cut(s) 48, 88
AoxI GGCC 3 cut(s) 22, 79, 221
ApaI GGGCCC 1 cut(s) 225
ApoI RAATTY 1 cut(s) 232
Asp700I GAANNNNTTC 1 cut(s) 127
AspS9I GGNCC 5 cut(s) 23, 57, 79, 221, 222
AvaII GGWCC 1 cut(s) 57
BaeGI GKGCMC 1 cut(s) 225
BanII GRGCYC 1 cut(s) 225
BccI CCATC 1 cut(s) 155
Bme18I GGWCC 1 cut(s) 57
BmgT120I GGNCC 5 cut(s) 23, 57, 79, 221, 222
BmiI GGNNCC 1 cut(s) 223
Bsc4I CCNNNNNNNGG 1 cut(s) 77
Bse1I ACTGG 2 cut(s) 25, 250
BseGI GGATG 2 cut(s) 46, 147
BseLI CCNNNNNNNGG 1 cut(s) 77
BseNI ACTGG 2 cut(s) 25, 250
BseSI GKGCMC 1 cut(s) 225
BseYI CCCAGC 1 cut(s) 172
Bsh1236I CGCG 1 cut(s) 162
BshFI GGCC 3 cut(s) 24, 81, 223
BsiSI CCGG 1 cut(s) 186
BslFI GGGAC 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 77
BsmFI GGGAC 1 cut(s) 54
BsnI GGCC 3 cut(s) 24, 81, 223
Bsp120I GGGCCC 1 cut(s) 221
Bsp1286I GDGCHC 1 cut(s) 225
Bsp143I GATC 1 cut(s) 157
BspANI GGCC 3 cut(s) 24, 81, 223
BspFNI CGCG 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 223
BsrI ACTGG 2 cut(s) 25, 250
BssMI GATC 1 cut(s) 157
BstEII GGTNACC 1 cut(s) 142
BstF5I GGATG 2 cut(s) 46, 147
BstFNI CGCG 1 cut(s) 162
BstKTI GATC 1 cut(s) 160
BstMBI GATC 1 cut(s) 157
BstPI GGTNACC 1 cut(s) 142
BstSLI GKGCMC 1 cut(s) 225
BstUI CGCG 1 cut(s) 162
BsuRI GGCC 3 cut(s) 24, 81, 223
BtsCI GGATG 2 cut(s) 46, 147
BtsIMutI CAGTG 1 cut(s) 257
Cfr13I GGNCC 5 cut(s) 23, 57, 79, 221, 222
Csp6I GTAC 1 cut(s) 193
CspCI CAANNNNNGTGG 2 cut(s) 80, 115
CviAII CATG 1 cut(s) 54
CviJI RGCY 5 cut(s) 24, 48, 81, 88, 223
CviKI_1 RGCY 5 cut(s) 24, 48, 81, 88, 223
CviQI GTAC 1 cut(s) 193
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
Eco24I GRGCYC 1 cut(s) 225
Eco47I GGWCC 1 cut(s) 57
Eco91I GGTNACC 1 cut(s) 142
EcoO109I RGGNCCY 1 cut(s) 222
EcoO65I GGTNACC 1 cut(s) 142
EcoT38I GRGCYC 1 cut(s) 225
FaeI CATG 1 cut(s) 57
FaiI YATR 2 cut(s) 55, 95
FaqI GGGAC 1 cut(s) 54
FatI CATG 1 cut(s) 53
FokI GGATG 2 cut(s) 53, 134
FriOI GRGCYC 1 cut(s) 225
GsaI CCCAGC 1 cut(s) 176
HaeIII GGCC 3 cut(s) 24, 81, 223
HapII CCGG 1 cut(s) 186
Hin1II CATG 1 cut(s) 57
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 1 cut(s) 67
HpaII CCGG 1 cut(s) 186
Hpy166II GTNNAC 1 cut(s) 195
Hpy188I TCNGA 1 cut(s) 137
Hpy188III TCNNGA 1 cut(s) 32
Hpy8I GTNNAC 1 cut(s) 195
HpyAV CCTTC 1 cut(s) 70
HpyCH4V TGCA 1 cut(s) 102
Hsp92II CATG 1 cut(s) 57
Kzo9I GATC 1 cut(s) 157
LmnI GCTCC 2 cut(s) 93, 176
LpnPI CCDG 7 cut(s) 6, 45, 95, 158, 199, 219, 263
MaeIII GTNAC 1 cut(s) 142
MalI GATC 1 cut(s) 159
MboI GATC 1 cut(s) 157
MhlI GDGCHC 1 cut(s) 225
MluCI AATT 2 cut(s) 153, 232
MlyI GAGTC 1 cut(s) 76
MnlI CCTC 1 cut(s) 235
MroXI GAANNNNTTC 1 cut(s) 127
MspI CCGG 1 cut(s) 186
MvnI CGCG 1 cut(s) 162
NdeII GATC 1 cut(s) 157
NlaIII CATG 1 cut(s) 57
NlaIV GGNNCC 1 cut(s) 223
PdmI GAANNNNTTC 1 cut(s) 127
PleI GAGTC 1 cut(s) 75
PpsI GAGTC 1 cut(s) 75
PspEI GGTNACC 1 cut(s) 142
PspFI CCCAGC 1 cut(s) 172
PspN4I GGNNCC 1 cut(s) 223
PspOMI GGGCCC 1 cut(s) 221
PspPI GGNCC 5 cut(s) 23, 57, 79, 221, 222
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
Sau3AI GATC 1 cut(s) 157
Sau96I GGNCC 5 cut(s) 23, 57, 79, 221, 222
SchI GAGTC 1 cut(s) 76
SduI GDGCHC 1 cut(s) 225
SetI ASST 3 cut(s) 50, 90, 144
SinI GGWCC 1 cut(s) 57
Sse9I AATT 2 cut(s) 153, 232
TasI AATT 2 cut(s) 153, 232
TatI WGTACW 1 cut(s) 192
TscAI CASTG 1 cut(s) 257
TspDTI ATGAA 3 cut(s) 42, 57, 120
TspGWI ACGGA 1 cut(s) 244
TspRI CASTG 1 cut(s) 257
VpaK11BI GGWCC 1 cut(s) 57
XapI RAATTY 1 cut(s) 232
XmnI GAANNNNTTC 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.