Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010641

Physical Location & Seq

Genomic Coordinates Reverse (-)

9803492 .. 9806731

Gene Structure 3240 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G23030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGAGAAGTATGAGATGGTGAAGGATTTAGGATTTGGTAATTTCGGATTGGCTCGGCTTATGCGTAATAAGCAAACAAACGAGCTTGTGGCTGTCAAATTCATCGATCGAGGCTACAAGATAGATGAGAACGTTGCAAGAGAAATAATCAATCATAGAGCTCTCAACCATCCGAATATTGTTCGGTTTAAAGAGGTTGTTTTAACTCCGACACATCTTGGAATAGTAATGGAGTATGCAGCTGGAGGAGAACTGTTCGAGCGGATATCTAGCGTGGGTCGATTTAGCGAAGCTGAGGCAAGATATTTCTTTCAACAACTCATTTGTGGAGTCCATTACTTACATGCATTGCAAATATGCCATAGAGATCTGAAATTAGAAAACACATTGCTTGATGGAAGCCCAGCACCACGTTTAAAAATTTGTGATTTTGGCTACTCAAAGTCTTCTGTTCTGCACTCCAACCCAAAATCAACGGTGGGAACTCCGGCATATATAGCACCGGAAGTTTTTTGTCGATCGGAATACGACGGAAAGTCAGTTGATGTGTGGTCTTGTGGAGTGGCCCTCTATGTTATGTTGGTAGGAGCTTATCCATTCGAAGACCCTAAAGACCCTCGCAATTTCCGAAAAACTGTTCAGAAAATAATGGCCGTAAACTACAAGATTCCAGGATATGTTCACATATCCGAAGACTGCAGAAAGTTACTATCTCGTATATTTGTTGCCAATCCGTTACATAGAAGTACGCTTAAAGAGATTAAGAGTCATGCATGGTTCCTAAAGAATTTGCCAAGAGAATTAAAGGAGCCAGCACAAGCAATCTATTACCAAAGGAATGTTAATCTTATTAATTTTTCTCCTCAAAGAGTAGAGGAGATTATGAAGATAGTTGGTGAGGCAAGAACCATTCCAAACCTTTCTCGCCCGGTCGAATCGCTTGGATCAGATAAAAAAGATGATGATGAAGAAGAATATTTGGATGCTAATGATGAAGAATGGTATGATGATTACGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Pkinase

Protein Analysis

339

Amino Acids

38.97

Weight (kDa)

6.57

Isoelectric Point (pI)

34.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	4 - 260	1.1e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	6 - 256	1.1e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23030
fragaria_vesca	FvH4_5g20490 FvH4_5g20490 FvH4_5g20490
malus_domestica	MD04G1054400.v1.1 MD06G1046300.v1.1
prunus_persica	Prupe.5G054500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0205831
rosa_laevigata	RLG00000003352
rosa_multiflora	Rmu_sc0000076.1_g000048 Rmu_sc0008518.1_g000008
rosa_roxburghii	Rroxscaffold_3G00251960
rosa_rugosa	Rorug07G0093200 Rorug07G0093200 Rorug07G0093300
rosa_samantha	Rh7AG224800 Rh7BG220000 Rh7CG238500 Rh7DG231600
rosa_wichuraiana	Rw7G019390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	262
AciI	CCGC	1 cut(s)	262
AclI	AACGTT	1 cut(s)	132
AclWI	GGATC	1 cut(s)	952
AcoI	YGGCCR	1 cut(s)	651
AcsI	RAATTY	3 cut(s)	98, 420, 787
AfaI	GTAC	1 cut(s)	748
AgsI	TTSAA	1 cut(s)	314
AhdI	GACNNNNNGTC	1 cut(s)	535
AjnI	CCWGG	1 cut(s)	670
AluBI	AGCT	5 cut(s)	85, 161, 242, 293, 590
AluI	AGCT	5 cut(s)	85, 161, 242, 293, 590
Alw21I	GWGCWC	1 cut(s)	163
AlwI	GGATC	1 cut(s)	952
AoxI	GGCC	2 cut(s)	564, 651
ApeKI	GCWGC	1 cut(s)	239
ApoI	RAATTY	3 cut(s)	98, 420, 787
AseI	ATTAAT	1 cut(s)	852
AspS9I	GGNCC	1 cut(s)	565
AsuC2I	CCSGG	1 cut(s)	929
AsuHPI	GGTGA	2 cut(s)	31, 908
AsuII	TTCGAA	1 cut(s)	600
BanII	GRGCYC	1 cut(s)	163
BbsI	GAAGAC	3 cut(s)	438, 609, 699
Bbv12I	GWGCWC	1 cut(s)	163
BbvCI	CCTCAGC	1 cut(s)	294
BbvI	GCAGC	1 cut(s)	251
BccI	CCATC	3 cut(s)	10, 177, 389
BceAI	ACGGC	1 cut(s)	638
BciT130I	CCWGG	1 cut(s)	672
BcnI	CCSGG	1 cut(s)	929
BfaI	CTAG	1 cut(s)	270
BfmI	CTRYAG	1 cut(s)	697
BglII	AGATCT	1 cut(s)	367
BisI	GCNGC	1 cut(s)	240
BlsI	GCNGC	1 cut(s)	241
Bme1390I	CCNGG	2 cut(s)	672, 929
BmeRI	GACNNNNNGTC	1 cut(s)	535
BmgT120I	GGNCC	1 cut(s)	565
BmiI	GGNNCC	2 cut(s)	779, 810
BmrFI	CCNGG	2 cut(s)	672, 929
BmsI	GCATC	1 cut(s)	973
BpiI	GAAGAC	3 cut(s)	438, 609, 699
BplI	GAGNNNNNCTC	2 cut(s)	552, 584
BpmI	CTGGAG	1 cut(s)	264
Bpu10I	CCTNAGC	1 cut(s)	294
Bpu14I	TTCGAA	1 cut(s)	600
BpuMI	CCSGG	1 cut(s)	929
Bsa29I	ATCGAT	1 cut(s)	105
BsaWI	WCCGGW	1 cut(s)	502
Bse3DI	GCAATG	2 cut(s)	347, 386
BseBI	CCWGG	1 cut(s)	672
BseCI	ATCGAT	1 cut(s)	105
BseGI	GGATG	2 cut(s)	169, 988
BseMI	GCAATG	2 cut(s)	347, 386
BseMII	CTCAG	1 cut(s)	285
BseRI	GAGGAG	3 cut(s)	261, 852, 890
BseXI	GCAGC	1 cut(s)	251
BseYI	CCCAGC	1 cut(s)	403
BsgI	GTGCAG	1 cut(s)	440
Bsh1285I	CGRYCG	3 cut(s)	109, 521, 933
BshFI	GGCC	2 cut(s)	566, 653
BshVI	ATCGAT	1 cut(s)	105
BsiEI	CGRYCG	3 cut(s)	109, 521, 933
BsiHKAI	GWGCWC	1 cut(s)	163
BsiSI	CCGG	3 cut(s)	488, 503, 929
BsnI	GGCC	2 cut(s)	566, 653
Bsp119I	TTCGAA	1 cut(s)	600
Bsp1286I	GDGCHC	1 cut(s)	163
Bsp143I	GATC	4 cut(s)	106, 367, 518, 944
BspACI	CCGC	1 cut(s)	262
BspANI	GGCC	2 cut(s)	566, 653
BspCNI	CTCAG	1 cut(s)	286
BspDI	ATCGAT	1 cut(s)	105
BspLI	GGNNCC	2 cut(s)	779, 810
BspMAI	CTGCAG	1 cut(s)	701
BspPI	GGATC	1 cut(s)	952
BspT104I	TTCGAA	1 cut(s)	600
BsrBI	CCGCTC	1 cut(s)	262
BsrDI	GCAATG	2 cut(s)	347, 386
BssMI	GATC	4 cut(s)	106, 367, 518, 944
Bst2UI	CCWGG	1 cut(s)	672
Bst4CI	ACNGT	3 cut(s)	255, 478, 637
BstBI	TTCGAA	1 cut(s)	600
BstC8I	GCNNGC	1 cut(s)	813
BstDEI	CTNAG	1 cut(s)	294
BstF5I	GGATG	2 cut(s)	169, 988
BstKTI	GATC	4 cut(s)	109, 370, 521, 947
BstMBI	GATC	4 cut(s)	106, 367, 518, 944
BstMCI	CGRYCG	3 cut(s)	109, 521, 933
BstMWI	GCNNNNNNNGC	2 cut(s)	70, 497
BstNI	CCWGG	1 cut(s)	672
BstNSI	RCATGY	1 cut(s)	347
BstSCI	CCNGG	2 cut(s)	670, 927
BstSFI	CTRYAG	1 cut(s)	697
BstV1I	GCAGC	1 cut(s)	251
BstV2I	GAAGAC	3 cut(s)	438, 609, 699
BstX2I	RGATCY	1 cut(s)	367
BstYI	RGATCY	1 cut(s)	367
Bsu15I	ATCGAT	1 cut(s)	105
BsuRI	GGCC	2 cut(s)	566, 653
BsuTUI	ATCGAT	1 cut(s)	105
BtsCI	GGATG	2 cut(s)	169, 988
Cac8I	GCNNGC	1 cut(s)	813
Cfr13I	GGNCC	1 cut(s)	565
ClaI	ATCGAT	1 cut(s)	105
Csp6I	GTAC	1 cut(s)	747
CviAII	CATG	3 cut(s)	344, 770, 774
CviQI	GTAC	1 cut(s)	747
DdeI	CTNAG	1 cut(s)	294
DpnI	GATC	4 cut(s)	108, 369, 520, 946
DpnII	GATC	4 cut(s)	106, 367, 518, 944
DraI	TTTAAA	2 cut(s)	190, 417
DriI	GACNNNNNGTC	1 cut(s)	535
EaeI	YGGCCR	1 cut(s)	651
Eam1105I	GACNNNNNGTC	1 cut(s)	535
Ecl136II	GAGCTC	1 cut(s)	161
Eco24I	GRGCYC	1 cut(s)	163
Eco32I	GATATC	1 cut(s)	267
Eco53kI	GAGCTC	1 cut(s)	161
EcoICRI	GAGCTC	1 cut(s)	161
EcoRII	CCWGG	1 cut(s)	670
EcoRV	GATATC	1 cut(s)	267
EcoT22I	ATGCAT	2 cut(s)	349, 775
EcoT38I	GRGCYC	1 cut(s)	163
FaeI	CATG	3 cut(s)	347, 773, 777
FatI	CATG	3 cut(s)	343, 769, 773
Fnu4HI	GCNGC	1 cut(s)	240
FokI	GGATG	2 cut(s)	156, 995
FriOI	GRGCYC	1 cut(s)	163
Fsp4HI	GCNGC	1 cut(s)	240
FspBI	CTAG	1 cut(s)	270
GluI	GCNGC	1 cut(s)	240
GsaI	CCCAGC	1 cut(s)	407
GsuI	CTGGAG	1 cut(s)	264
HaeIII	GGCC	2 cut(s)	566, 653
HapII	CCGG	3 cut(s)	488, 503, 929
Hin1II	CATG	3 cut(s)	347, 773, 777
HinfI	GANTC	4 cut(s)	330, 667, 766, 935
HpaII	CCGG	3 cut(s)	488, 503, 929
HphI	GGTGA	2 cut(s)	31, 908
Hpy166II	GTNNAC	2 cut(s)	658, 682
Hpy188I	TCNGA	9 cut(s)	47, 174, 210, 372, 523, 629, 642, 691, 949
Hpy8I	GTNNAC	2 cut(s)	658, 682
Hpy99I	CGWCG	1 cut(s)	533
HpyAV	CCTTC	1 cut(s)	16
HpyCH4III	ACNGT	3 cut(s)	255, 478, 637
HpyCH4IV	ACGT	2 cut(s)	132, 412
HpyCH4V	TGCA	7 cut(s)	137, 239, 347, 352, 457, 699, 773
HpyF10VI	GCNNNNNNNGC	2 cut(s)	70, 497
HpyF3I	CTNAG	1 cut(s)	294
HpySE526I	ACGT	2 cut(s)	132, 412
Hsp92II	CATG	3 cut(s)	347, 773, 777
Kzo9I	GATC	4 cut(s)	106, 367, 518, 944
LmnI	GCTCC	2 cut(s)	587, 808
LpnPI	CCDG	8 cut(s)	228, 417, 501, 516, 657, 684, 825, 942
Lsp1109I	GCAGC	1 cut(s)	251
LweI	GCATC	1 cut(s)	973
MaeI	CTAG	1 cut(s)	270
MaeII	ACGT	2 cut(s)	132, 412
MaeIII	GTNAC	2 cut(s)	705, 735
MalI	GATC	4 cut(s)	108, 369, 520, 946
MbiI	CCGCTC	1 cut(s)	262
MboI	GATC	4 cut(s)	106, 367, 518, 944
MboII	GAAGA	7 cut(s)	438, 614, 704, 898, 980, 983, 1007
MflI	RGATCY	1 cut(s)	367
MhlI	GDGCHC	1 cut(s)	163
MluCI	AATT	8 cut(s)	40, 98, 374, 420, 622, 787, 800, 853
MlyI	GAGTC	2 cut(s)	339, 775
MmeI	TCCRAC	2 cut(s)	233, 486
MnlI	CCTC	9 cut(s)	104, 187, 239, 289, 578, 627, 868, 873, 892
Mph1103I	ATGCAT	2 cut(s)	349, 775
MseI	TTAA	8 cut(s)	189, 203, 416, 753, 762, 803, 843, 852
MspA1I	CMGCKG	1 cut(s)	242
MspI	CCGG	3 cut(s)	488, 503, 929
MspR9I	CCNGG	2 cut(s)	672, 929
MvaI	CCWGG	1 cut(s)	672
MwoI	GCNNNNNNNGC	2 cut(s)	70, 497
NciI	CCSGG	1 cut(s)	929
NdeII	GATC	4 cut(s)	106, 367, 518, 944
NlaIII	CATG	3 cut(s)	347, 773, 777
NlaIV	GGNNCC	2 cut(s)	779, 810
NmeAIII	GCCGAG	1 cut(s)	34
NsiI	ATGCAT	2 cut(s)	349, 775
NspI	RCATGY	1 cut(s)	347
NspV	TTCGAA	1 cut(s)	600
PcsI	WCGNNNNNNNCGW	2 cut(s)	61, 625
PfeI	GAWTC	2 cut(s)	667, 935
PfoI	TCCNGGA	1 cut(s)	670
PkrI	GCNGC	1 cut(s)	241
Ple19I	CGATCG	2 cut(s)	109, 521
PleI	GAGTC	2 cut(s)	338, 774
PpsI	GAGTC	2 cut(s)	338, 774
PshBI	ATTAAT	1 cut(s)	852
Psp124BI	GAGCTC	1 cut(s)	163
Psp1406I	AACGTT	1 cut(s)	132
Psp6I	CCWGG	1 cut(s)	670
PspFI	CCCAGC	1 cut(s)	403
PspGI	CCWGG	1 cut(s)	670
PspN4I	GGNNCC	2 cut(s)	779, 810
PspPI	GGNCC	1 cut(s)	565
PstI	CTGCAG	1 cut(s)	701
PsuI	RGATCY	1 cut(s)	367
PvuI	CGATCG	2 cut(s)	109, 521
PvuII	CAGCTG	1 cut(s)	242
RsaI	GTAC	1 cut(s)	748
RsaNI	GTAC	1 cut(s)	747
SacI	GAGCTC	1 cut(s)	163
SaqAI	TTAA	8 cut(s)	189, 203, 416, 753, 762, 803, 843, 852
SatI	GCNGC	1 cut(s)	240
Sau3AI	GATC	4 cut(s)	106, 367, 518, 944
Sau96I	GGNCC	1 cut(s)	565
SchI	GAGTC	2 cut(s)	339, 775
ScrFI	CCNGG	2 cut(s)	672, 929
SduI	GDGCHC	1 cut(s)	163
SetI	ASST	9 cut(s)	87, 135, 163, 198, 244, 295, 415, 592, 921
SfaNI	GCATC	1 cut(s)	973
SfcI	CTRYAG	1 cut(s)	697
SfuI	TTCGAA	1 cut(s)	600
Sse9I	AATT	8 cut(s)	40, 98, 374, 420, 622, 787, 800, 853
SsiI	CCGC	1 cut(s)	262
SspI	AATATT	2 cut(s)	178, 977
SspMI	CTAG	1 cut(s)	270
SstI	GAGCTC	1 cut(s)	163
StyD4I	CCNGG	2 cut(s)	670, 927
TaaI	ACNGT	3 cut(s)	255, 478, 637
TaiI	ACGT	2 cut(s)	135, 415
TaqI	TCGA	7 cut(s)	105, 109, 258, 280, 517, 600, 933
TasI	AATT	8 cut(s)	40, 98, 374, 420, 622, 787, 800, 853
TfiI	GAWTC	2 cut(s)	667, 935
Tru1I	TTAA	8 cut(s)	189, 203, 416, 753, 762, 803, 843, 852
Tru9I	TTAA	8 cut(s)	189, 203, 416, 753, 762, 803, 843, 852
TseI	GCWGC	1 cut(s)	239
TspDTI	ATGAA	4 cut(s)	91, 899, 981, 1008
TspGWI	ACGGA	2 cut(s)	546, 723
VspI	ATTAAT	1 cut(s)	852
XapI	RAATTY	3 cut(s)	98, 420, 787
XceI	RCATGY	1 cut(s)	347
XspI	CTAG	1 cut(s)	270
Zsp2I	ATGCAT	2 cut(s)	349, 775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.